sabina 0.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (38) hide show
  1. checksums.yaml +7 -0
  2. data/.gitignore +10 -0
  3. data/.rspec +2 -0
  4. data/.travis.yml +16 -0
  5. data/CODE_OF_CONDUCT.md +49 -0
  6. data/Gemfile +13 -0
  7. data/LICENSE.txt +21 -0
  8. data/README.md +201 -0
  9. data/Rakefile +4 -0
  10. data/examples/example_ae_01/ae_learning_process.gif +0 -0
  11. data/examples/example_ae_01/ae_original_data.png +0 -0
  12. data/examples/example_ae_01/main.rb +123 -0
  13. data/examples/example_ae_01/training_data.csv +821 -0
  14. data/examples/example_mp_01/main.rb +158 -0
  15. data/examples/example_mp_01/mp_learning_process.gif +0 -0
  16. data/examples/example_mp_01/mp_training_data.png +0 -0
  17. data/examples/example_mp_01/training_data.csv +601 -0
  18. data/examples/example_mp_02/main.rb +170 -0
  19. data/examples/example_mp_02/mp_learning_process.gif +0 -0
  20. data/examples/example_mp_02/mp_training_data.png +0 -0
  21. data/examples/example_mp_02/training_data.csv +821 -0
  22. data/lib/sabina/auto_encoder.rb +46 -0
  23. data/lib/sabina/configuration.rb +41 -0
  24. data/lib/sabina/layer/ae_hidden_layer.rb +10 -0
  25. data/lib/sabina/layer/ae_input_layer.rb +4 -0
  26. data/lib/sabina/layer/ae_output_layer.rb +10 -0
  27. data/lib/sabina/layer/base_layer.rb +33 -0
  28. data/lib/sabina/layer/mp_hidden_layer.rb +4 -0
  29. data/lib/sabina/layer/mp_input_layer.rb +4 -0
  30. data/lib/sabina/layer/mp_output_layer.rb +12 -0
  31. data/lib/sabina/layer.rb +11 -0
  32. data/lib/sabina/multilayer_perceptron.rb +135 -0
  33. data/lib/sabina/sparse_auto_encoder.rb +49 -0
  34. data/lib/sabina/util.rb +11 -0
  35. data/lib/sabina/version.rb +3 -0
  36. data/lib/sabina.rb +17 -0
  37. data/sabina.gemspec +37 -0
  38. metadata +124 -0
@@ -0,0 +1,158 @@
1
+ $LOAD_PATH.unshift File.expand_path('../../../lib', __FILE__)
2
+ require 'open3'
3
+ require 'sabina'
4
+
5
+ DIM = 2
6
+ K = 2
7
+ LOOP_NUM = 100
8
+ xrange = [-2.2, 2.2]
9
+ yrange = [-2.2, 2.2]
10
+
11
+ training_data = Sabina::MultilayerPerceptron.load_csv('training_data.csv')
12
+
13
+ options = {
14
+ :layers => [
15
+ Sabina::Layer::MPInputLayer.new(DIM),
16
+ Sabina::Layer::MPHiddenLayer.new(16),
17
+ Sabina::Layer::MPHiddenLayer.new(8),
18
+ Sabina::Layer::MPOutputLayer.new(K)
19
+ ],
20
+ :mini_batch_size => 10,
21
+ :learning_rate => 0.01,
22
+ :training_data => training_data,
23
+ }
24
+
25
+ mp = Sabina::MultilayerPerceptron.new(options)
26
+
27
+
28
+
29
+ ##################################################
30
+ # Make a chart of trainig data.
31
+ ##################################################
32
+ Open3.popen3('gnuplot') do |gp_in, gp_out, gp_err|
33
+ output_file = "./mp_training_data.png"
34
+ gp_in.puts "set colorsequence classic"
35
+ gp_in.puts "set terminal png size 480, 450"
36
+ gp_in.puts "set output '#{output_file}'"
37
+ gp_in.puts "set label 2 center at screen 0.5,0.9 'Training Data' font 'Helvetica,22'"
38
+ gp_in.puts "set tmargin 3.2"
39
+ gp_in.puts "set xlabel 'x0'"
40
+ gp_in.puts "set ylabel 'x1'"
41
+ gp_in.puts "set size square"
42
+ gp_in.puts xrange.tap { |f, t| break "set xrange [#{f}:#{t}]" }
43
+ gp_in.puts yrange.tap { |f, t| break "set yrange [#{f}:#{t}]" }
44
+ plot = "plot "
45
+
46
+ K.times do |k|
47
+ plot << "'-' notitle pt 1 ps 1 lc #{k+1},\\\n"
48
+ end
49
+ plot.gsub!(/,\\\n\z/, "\n")
50
+
51
+ K.times do |k|
52
+ label = Array.new(K) { |j| j == k ? 1 : 0 }
53
+ training_data.each do |data|
54
+ if label == data[:d]
55
+ data[:x].tap { |x, y| plot << "#{x}, #{y}\n" }
56
+ end
57
+ end
58
+ plot << "e\n"
59
+ end
60
+
61
+ gp_in.puts plot
62
+ puts output_file
63
+ gp_in.puts "set output"
64
+ gp_in.puts "exit"
65
+ gp_in.close
66
+ end
67
+
68
+
69
+ ##################################################
70
+ # Make a GIF of the learning process.
71
+ ##################################################
72
+ Open3.popen3('gnuplot') do |gp_in, gp_out, gp_err|
73
+ output_file = "./mp_learning_process.gif"
74
+ gp_in.puts "set colorsequence classic"
75
+ gp_in.puts "set terminal gif animate delay 10 optimize size 880, 450"
76
+ gp_in.puts "set output '#{output_file}'"
77
+ gp_in.puts "set tmargin 3.2"
78
+ gp_in.puts "set size square"
79
+ log = []
80
+ tmp_data = xrange.map { |v| (20*v).to_i }.tap { |f, t| break [*f..t] }
81
+ .product yrange.map { |v| (20*v).to_i }.tap { |f, t| break [*f..t] }
82
+ tmp_data.map! do |data|
83
+ data.each_with_object(0.05).map(&:*)
84
+ end
85
+ x_mat = Matrix.columns( tmp_data )
86
+
87
+ LOOP_NUM.times do |t|
88
+ mp.learn
89
+ log << mp.error(training_data)
90
+ gp_in.puts "set multiplot layout 1, 2"
91
+
92
+ ##################################################
93
+ # Training Data
94
+ ##################################################
95
+ gp_in.puts "set label 2 center at screen 0.28,0.9 'Training Data' font 'Helvetica,22'"
96
+ gp_in.puts xrange.tap { |f, t| break "set xrange [#{f}:#{t}]" }
97
+ gp_in.puts yrange.tap { |f, t| break "set yrange [#{f}:#{t}]" }
98
+ gp_in.puts "set xlabel 'x0'"
99
+ gp_in.puts "set ylabel 'x1'"
100
+ gp_in.puts "unset grid"
101
+ plot = "plot "
102
+
103
+ K.times do |k|
104
+ plot << "'-' notitle pt 1 ps 1 lc #{k+1},\\\n"
105
+ end
106
+ K.times do |k|
107
+ plot << "'-' notitle pt 7 ps 1 lc #{k+1},\\\n"
108
+ end
109
+ plot.gsub!(/,\\\n\z/, "\n")
110
+
111
+ y_ary = mp.propagate_forward(x_mat).t.to_a
112
+ K.times do |k|
113
+ tmp_data.each_with_index do |(x, y), n|
114
+ label = y_ary[n].index( y_ary[n].max )
115
+ plot << "#{x}, #{y}\n" if label == k
116
+ end
117
+ plot << "e\n"
118
+ end
119
+
120
+ K.times do |k|
121
+ label = Array.new(K) { |j| j == k ? 1 : 0 }
122
+ training_data.each do |data|
123
+ if label == data[:d]
124
+ data[:x].tap { |x, y| plot << "#{x}, #{y}\n" }
125
+ end
126
+ end
127
+ plot << "e\n"
128
+ end
129
+ gp_in.puts plot
130
+
131
+ ##################################################
132
+ # Training Error
133
+ ##################################################
134
+ gp_in.puts "set label 2 center at screen 0.79,0.9 'Training Error' font 'Helvetica,22'"
135
+ gp_in.puts "set xrange [0:#{LOOP_NUM}]"
136
+ gp_in.puts "set yrange [0:#{log.first + 10}]"
137
+ gp_in.puts "set xlabel 'iteration number'"
138
+ gp_in.puts "set ylabel 'training error'"
139
+ gp_in.puts "set grid"
140
+ plot = "plot "
141
+
142
+ plot << "'-' notitle with lines lw 3 lt 1 lc 1,\\\n"
143
+ plot.gsub!(/,\\\n\z/, "\n")
144
+ log.each { |x, y| plot << "#{x}, #{y}\n" }
145
+ plot << "e\n"
146
+ gp_in.puts plot
147
+
148
+ # progress bar
149
+ puts " error : #{log.last}"
150
+ puts " [#{("*"*(t / (LOOP_NUM / 10))).ljust(10, " ")}]"
151
+ print "\e[2A"; STDOUT.flush;
152
+ end
153
+
154
+ gp_in.puts "set output"
155
+ puts output_file
156
+ gp_in.puts "exit"
157
+ gp_in.close
158
+ end