rubydown 0.1.0
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- checksums.yaml +7 -0
- data/.circleci/config.yml +35 -0
- data/.gitignore +3 -0
- data/Dockerfile +9 -0
- data/Gemfile +8 -0
- data/Gemfile.lock +43 -0
- data/LICENSE +21 -0
- data/README.md +32 -0
- data/Rakefile +2 -0
- data/_config.yml +1 -0
- data/appveyor.yml +25 -0
- data/bin/console +14 -0
- data/bin/setup +8 -0
- data/docs/_config.yml +1 -0
- data/docs/index.html +20 -0
- data/docs/sidebyside.md +1 -0
- data/examples/bio.html +129 -0
- data/examples/bio.md +73 -0
- data/examples/graph.html +160 -0
- data/examples/graph.md +11 -0
- data/examples/index.html +217 -0
- data/examples/index.md +58 -0
- data/examples/numo-gnuplot.ipynb +1515 -0
- data/examples/rbplotly-bar.html +146 -0
- data/examples/rbplotly-bar.md +54 -0
- data/examples/rbplotly-basic.html +134 -0
- data/examples/rbplotly-basic.md +43 -0
- data/examples/rbplotly-boxplot.html +136 -0
- data/examples/rbplotly-boxplot.md +60 -0
- data/examples/rbplotly-heatmap.html +95 -0
- data/examples/rbplotly-heatmap.md +35 -0
- data/examples/rbplotly-hist.html +52 -0
- data/examples/rbplotly-hist.md +9 -0
- data/examples/rbplotly-line.html +62 -0
- data/examples/rbplotly-line.md +19 -0
- data/examples/rbplotly-pie.html +100 -0
- data/examples/rbplotly-pie.md +40 -0
- data/examples/rbplotly-scatter.html +148 -0
- data/examples/rbplotly-scatter.md +71 -0
- data/examples/rumale-kmeans.html +75 -0
- data/examples/rumale-kmeans.md +33 -0
- data/examples/rumale.html +967 -0
- data/examples/rumale.md +31 -0
- data/examples/table.html +57 -0
- data/examples/table.md +7 -0
- data/exe/rubydown +114 -0
- data/lib/rubydown.rb +59 -0
- data/lib/rubydown/version.rb +3 -0
- data/rubydown.gemspec +47 -0
- data/templates/template.html.erb +26 -0
- metadata +207 -0
data/examples/rumale.md
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Rumale machine learning examples
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~~~ruby
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require 'rumale'
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require 'rdatasets'
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iris = RDatasets.load(:datasets, :iris)
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iris_labels = iris['Species'].to_a
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encoder = Rumale::Preprocessing::LabelEncoder.new
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labels = encoder.fit_transform(iris_labels)
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p "hoge"
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~~~
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~~~ruby
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samples = Numo::DFloat[*iris[0..3].to_matrix.to_a]
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~~~
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~~~ruby
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model = Rumale::LinearModel::SVC.new(
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reg_param: 0.0001,
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fit_bias: true,
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max_iter: 3000,
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random_seed: 1
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)
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model.fit(samples, labels)
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p model.predict(samples).to_a
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~~~
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data/examples/table.html
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<!DOCTYPE html>
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<html>
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<head>
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<meta name="viewport" content="width=device-width, initial-scale=1">
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<link href='https://cdnjs.cloudflare.com/ajax/libs/github-markdown-css/2.10.0/github-markdown.min.css' rel='stylesheet' type='text/css' />
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<style>
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article.markdown-body {
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box-sizing: border-box;
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min-width: 200px;
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max-width: 980px;
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margin: 0 auto;
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padding: 45px;
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}
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span.line-numbers {
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display: none;
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}
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</style>
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<script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js"></script>
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</head>
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<body>
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<article class='markdown-body'>
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<h1 id="table-generation-example">Table generation example</h1>
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<h2 id="with-numonarrayhttpsgithubcomruby-numonumo-narray">With <a href="https://github.com/ruby-numo/numo-narray">Numo::Narray</a></h2>
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<pre><code class="language-ruby">a = Numo::DFloat.new(3, 5).seq
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</code></pre>
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<table>
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<tbody>
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<tr>
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<td>0.0</td>
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<td>1.0</td>
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<td>2.0</td>
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<td>3.0</td>
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<td>4.0</td>
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</tr>
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<tr>
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<td>5.0</td>
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<td>6.0</td>
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<td>7.0</td>
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<td>8.0</td>
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<td>9.0</td>
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</tr>
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<tr>
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<td>10.0</td>
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<td>11.0</td>
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<td>12.0</td>
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<td>13.0</td>
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<td>14.0</td>
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</tr>
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</tbody>
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</table>
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</article>
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</body>
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</html>
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data/examples/table.md
ADDED
data/exe/rubydown
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#! /usr/bin/env ruby
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require 'kramdown'
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require 'erb'
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require 'stringio'
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require 'optparse'
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require 'rubydown'
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def get_context
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binding
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end
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class EvalDoc < Kramdown::Document
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attr_accessor :context, :stdout
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def initialize(text, *opts)
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super(text, *opts)
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self.context = get_context
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self.root = scan_el(self.root)
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end
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private
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def scan_el(el)
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new_children = []
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el.children.each do |child_el|
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child_el = scan_el(child_el)
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new_children << child_el
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is_code = child_el.type == :codeblock || child_el.type == :codespan
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if is_code && child_el.options[:lang] == 'ruby'
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code = child_el.value.gsub(/^ *ruby *\n/, '')
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new_children << eval_and_elementize(code)
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end
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end
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el.children = new_children
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return el
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end
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def eval_and_elementize(code)
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stdout = StringIO.new
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$stdout = stdout
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eval_result = self.context.eval(code)
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$stdout = STDOUT
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stdout_string = stdout.string.empty? ? '' : stdout.string + "\n"
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case
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when eval_result.respond_to?(:to_html)
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Kramdown::Document.new(eval_result.to_html, input: :html).root
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else
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text_result_el(stdout_string + "=> #{eval_result}")
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end
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end
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def text_result_el(text)
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text_el = Kramdown::Element.new(:codeblock, text)
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p_el = Kramdown::Element.new(:p)
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p_el.children << text_el
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p_el
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end
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end
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def main # to separate binding
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options = {}
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options[:erb] = File.expand_path('../../templates/template.html.erb', __FILE__)
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option_parser = OptionParser.new do |opts|
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opts.on("-i INPUT", "Input form the file") do |input|
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options[:input] = input
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end
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opts.on("-e ERB", "Specify template file") do |erb|
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options[:erb] = erb
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end
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opts.on("-o OUTPUT", "Output html to OUTPUT") do |output|
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options[:output] = output
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end
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opts.on("-h", "--help", "Prints this help") do
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puts opts
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exit
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end
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opts.on_tail("--version", "Show version") do
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puts Rubydown::VERSION
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exit
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end
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end
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option_parser.parse!
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# puts options.inspect
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# puts options[:input]
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# puts options[:erb]
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# puts options[:output]
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case options[:input]
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when /\.md\z/i
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options[:output] ||= options[:input].sub(/\.md\z/i, '.html')
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when /./
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abort("Input file must be markdown (*.md)")
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else
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abort(option_parser.help)
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end
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doc = EvalDoc.new(File.read(options[:input], encoding: 'utf-8')) # using in ERB
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File.write(options[:output], ERB.new(File.read(options[:erb])).result(binding))
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# puts ERB.new(File.read(options[:erb])).result(binding)
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end
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main
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data/lib/rubydown.rb
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require "rubydown/version"
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require 'numo/narray'
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require 'rbplotly'
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require 'numo/gnuplot'
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require 'base64'
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require 'tempfile'
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class Numo::NArray
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def to_html
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rows = self.to_a.map do |row|
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elems = row.map do |elem|
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"<td>#{elem}</td>"
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end
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"<tr>#{elems.join}</tr>"
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end
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"<table>#{rows.join}</table>"
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end
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end
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class Numo::Int32
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def to_html
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<<-HTML
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#{self.to_a}
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HTML
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end
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end
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module Rubydown
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class RbMarkPlot < Numo::Gnuplot
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def plot(*args)
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super(*args)
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self
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end
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def splot(*args)
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super(*args)
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self
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end
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def _plot_splot(*args)
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@tempfile = Tempfile.open(['plot', '.png'])
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set terminal: 'png'
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set output: @tempfile.path
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super(*args)
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end
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|
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def to_html
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img_b64 = Base64.encode64(File.binread(@tempfile))
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<<-HTML
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<img src='data:image/png;base64,#{img_b64}' />
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HTML
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end
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end
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|
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class Error < StandardError; end
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# Your code goes here...
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end
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data/rubydown.gemspec
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lib = File.expand_path("../lib", __FILE__)
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$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
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require "rubydown/version"
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Gem::Specification.new do |spec|
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spec.name = "rubydown"
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spec.version = Rubydown::VERSION
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spec.authors = ["Kozo Nishida"]
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spec.email = ["knishida@riken.jp"]
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spec.license = 'MIT'
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spec.summary = "Pure Ruby R Markdown clone."
|
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spec.description = "rubydown is R Markdown clone for Rubyists."
|
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spec.homepage = "https://github.com/sciruby-jp/rubydown"
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+
|
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# Prevent pushing this gem to RubyGems.org. To allow pushes either set the 'allowed_push_host'
|
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# to allow pushing to a single host or delete this section to allow pushing to any host.
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if spec.respond_to?(:metadata)
|
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# spec.metadata["allowed_push_host"] = "TODO: Set to 'http://mygemserver.com'"
|
20
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+
|
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spec.metadata["homepage_uri"] = spec.homepage
|
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spec.metadata["source_code_uri"] = "https://github.com/sciruby-jp/rubydown"
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# spec.metadata["changelog_uri"] = "https//github.com/sciruby-jp/rubydown/blob/master/CHANGELOG.md"
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else
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raise "RubyGems 2.0 or newer is required to protect against " \
|
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"public gem pushes."
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end
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+
|
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# Specify which files should be added to the gem when it is released.
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# The `git ls-files -z` loads the files in the RubyGem that have been added into git.
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spec.files = Dir.chdir(File.expand_path('..', __FILE__)) do
|
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`git ls-files -z`.split("\x0").reject { |f| f.match(%r{^(test|spec|features)/}) }
|
33
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end
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spec.bindir = "exe"
|
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spec.executables = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
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36
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spec.require_paths = ["lib"]
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37
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+
|
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spec.add_dependency "kramdown", "~> 2.1"
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spec.add_dependency "daru", "~> 0.2"
|
40
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spec.add_dependency "numo-narray", "~> 0.9.1"
|
41
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spec.add_dependency "numo-gnuplot", "~> 0.2.4"
|
42
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spec.add_dependency "rbplotly", "~> 0.1.2"
|
43
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+
|
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spec.add_development_dependency "bundler", "~> 1.17"
|
45
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spec.add_development_dependency "rake", "~> 10.0"
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spec.add_development_dependency "test-unit", "~> 3.3"
|
47
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end
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<!DOCTYPE html>
|
2
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<html>
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3
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<head>
|
4
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<meta name="viewport" content="width=device-width, initial-scale=1">
|
5
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+
<link href='https://cdnjs.cloudflare.com/ajax/libs/github-markdown-css/2.10.0/github-markdown.min.css' rel='stylesheet' type='text/css' />
|
6
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+
<style>
|
7
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article.markdown-body {
|
8
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+
box-sizing: border-box;
|
9
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+
min-width: 200px;
|
10
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+
max-width: 980px;
|
11
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+
margin: 0 auto;
|
12
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+
padding: 45px;
|
13
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+
}
|
14
|
+
|
15
|
+
span.line-numbers {
|
16
|
+
display: none;
|
17
|
+
}
|
18
|
+
</style>
|
19
|
+
<script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js"></script>
|
20
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+
</head>
|
21
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+
<body>
|
22
|
+
<article class='markdown-body'>
|
23
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+
<%= doc.to_html %>
|
24
|
+
</article>
|
25
|
+
</body>
|
26
|
+
</html>
|
metadata
ADDED
@@ -0,0 +1,207 @@
|
|
1
|
+
--- !ruby/object:Gem::Specification
|
2
|
+
name: rubydown
|
3
|
+
version: !ruby/object:Gem::Version
|
4
|
+
version: 0.1.0
|
5
|
+
platform: ruby
|
6
|
+
authors:
|
7
|
+
- Kozo Nishida
|
8
|
+
autorequire:
|
9
|
+
bindir: exe
|
10
|
+
cert_chain: []
|
11
|
+
date: 2019-03-10 00:00:00.000000000 Z
|
12
|
+
dependencies:
|
13
|
+
- !ruby/object:Gem::Dependency
|
14
|
+
name: kramdown
|
15
|
+
requirement: !ruby/object:Gem::Requirement
|
16
|
+
requirements:
|
17
|
+
- - "~>"
|
18
|
+
- !ruby/object:Gem::Version
|
19
|
+
version: '2.1'
|
20
|
+
type: :runtime
|
21
|
+
prerelease: false
|
22
|
+
version_requirements: !ruby/object:Gem::Requirement
|
23
|
+
requirements:
|
24
|
+
- - "~>"
|
25
|
+
- !ruby/object:Gem::Version
|
26
|
+
version: '2.1'
|
27
|
+
- !ruby/object:Gem::Dependency
|
28
|
+
name: daru
|
29
|
+
requirement: !ruby/object:Gem::Requirement
|
30
|
+
requirements:
|
31
|
+
- - "~>"
|
32
|
+
- !ruby/object:Gem::Version
|
33
|
+
version: '0.2'
|
34
|
+
type: :runtime
|
35
|
+
prerelease: false
|
36
|
+
version_requirements: !ruby/object:Gem::Requirement
|
37
|
+
requirements:
|
38
|
+
- - "~>"
|
39
|
+
- !ruby/object:Gem::Version
|
40
|
+
version: '0.2'
|
41
|
+
- !ruby/object:Gem::Dependency
|
42
|
+
name: numo-narray
|
43
|
+
requirement: !ruby/object:Gem::Requirement
|
44
|
+
requirements:
|
45
|
+
- - "~>"
|
46
|
+
- !ruby/object:Gem::Version
|
47
|
+
version: 0.9.1
|
48
|
+
type: :runtime
|
49
|
+
prerelease: false
|
50
|
+
version_requirements: !ruby/object:Gem::Requirement
|
51
|
+
requirements:
|
52
|
+
- - "~>"
|
53
|
+
- !ruby/object:Gem::Version
|
54
|
+
version: 0.9.1
|
55
|
+
- !ruby/object:Gem::Dependency
|
56
|
+
name: numo-gnuplot
|
57
|
+
requirement: !ruby/object:Gem::Requirement
|
58
|
+
requirements:
|
59
|
+
- - "~>"
|
60
|
+
- !ruby/object:Gem::Version
|
61
|
+
version: 0.2.4
|
62
|
+
type: :runtime
|
63
|
+
prerelease: false
|
64
|
+
version_requirements: !ruby/object:Gem::Requirement
|
65
|
+
requirements:
|
66
|
+
- - "~>"
|
67
|
+
- !ruby/object:Gem::Version
|
68
|
+
version: 0.2.4
|
69
|
+
- !ruby/object:Gem::Dependency
|
70
|
+
name: rbplotly
|
71
|
+
requirement: !ruby/object:Gem::Requirement
|
72
|
+
requirements:
|
73
|
+
- - "~>"
|
74
|
+
- !ruby/object:Gem::Version
|
75
|
+
version: 0.1.2
|
76
|
+
type: :runtime
|
77
|
+
prerelease: false
|
78
|
+
version_requirements: !ruby/object:Gem::Requirement
|
79
|
+
requirements:
|
80
|
+
- - "~>"
|
81
|
+
- !ruby/object:Gem::Version
|
82
|
+
version: 0.1.2
|
83
|
+
- !ruby/object:Gem::Dependency
|
84
|
+
name: bundler
|
85
|
+
requirement: !ruby/object:Gem::Requirement
|
86
|
+
requirements:
|
87
|
+
- - "~>"
|
88
|
+
- !ruby/object:Gem::Version
|
89
|
+
version: '1.17'
|
90
|
+
type: :development
|
91
|
+
prerelease: false
|
92
|
+
version_requirements: !ruby/object:Gem::Requirement
|
93
|
+
requirements:
|
94
|
+
- - "~>"
|
95
|
+
- !ruby/object:Gem::Version
|
96
|
+
version: '1.17'
|
97
|
+
- !ruby/object:Gem::Dependency
|
98
|
+
name: rake
|
99
|
+
requirement: !ruby/object:Gem::Requirement
|
100
|
+
requirements:
|
101
|
+
- - "~>"
|
102
|
+
- !ruby/object:Gem::Version
|
103
|
+
version: '10.0'
|
104
|
+
type: :development
|
105
|
+
prerelease: false
|
106
|
+
version_requirements: !ruby/object:Gem::Requirement
|
107
|
+
requirements:
|
108
|
+
- - "~>"
|
109
|
+
- !ruby/object:Gem::Version
|
110
|
+
version: '10.0'
|
111
|
+
- !ruby/object:Gem::Dependency
|
112
|
+
name: test-unit
|
113
|
+
requirement: !ruby/object:Gem::Requirement
|
114
|
+
requirements:
|
115
|
+
- - "~>"
|
116
|
+
- !ruby/object:Gem::Version
|
117
|
+
version: '3.3'
|
118
|
+
type: :development
|
119
|
+
prerelease: false
|
120
|
+
version_requirements: !ruby/object:Gem::Requirement
|
121
|
+
requirements:
|
122
|
+
- - "~>"
|
123
|
+
- !ruby/object:Gem::Version
|
124
|
+
version: '3.3'
|
125
|
+
description: rubydown is R Markdown clone for Rubyists.
|
126
|
+
email:
|
127
|
+
- knishida@riken.jp
|
128
|
+
executables:
|
129
|
+
- rubydown
|
130
|
+
extensions: []
|
131
|
+
extra_rdoc_files: []
|
132
|
+
files:
|
133
|
+
- ".circleci/config.yml"
|
134
|
+
- ".gitignore"
|
135
|
+
- Dockerfile
|
136
|
+
- Gemfile
|
137
|
+
- Gemfile.lock
|
138
|
+
- LICENSE
|
139
|
+
- README.md
|
140
|
+
- Rakefile
|
141
|
+
- _config.yml
|
142
|
+
- appveyor.yml
|
143
|
+
- bin/console
|
144
|
+
- bin/setup
|
145
|
+
- docs/_config.yml
|
146
|
+
- docs/index.html
|
147
|
+
- docs/sidebyside.md
|
148
|
+
- examples/bio.html
|
149
|
+
- examples/bio.md
|
150
|
+
- examples/graph.html
|
151
|
+
- examples/graph.md
|
152
|
+
- examples/index.html
|
153
|
+
- examples/index.md
|
154
|
+
- examples/numo-gnuplot.ipynb
|
155
|
+
- examples/rbplotly-bar.html
|
156
|
+
- examples/rbplotly-bar.md
|
157
|
+
- examples/rbplotly-basic.html
|
158
|
+
- examples/rbplotly-basic.md
|
159
|
+
- examples/rbplotly-boxplot.html
|
160
|
+
- examples/rbplotly-boxplot.md
|
161
|
+
- examples/rbplotly-heatmap.html
|
162
|
+
- examples/rbplotly-heatmap.md
|
163
|
+
- examples/rbplotly-hist.html
|
164
|
+
- examples/rbplotly-hist.md
|
165
|
+
- examples/rbplotly-line.html
|
166
|
+
- examples/rbplotly-line.md
|
167
|
+
- examples/rbplotly-pie.html
|
168
|
+
- examples/rbplotly-pie.md
|
169
|
+
- examples/rbplotly-scatter.html
|
170
|
+
- examples/rbplotly-scatter.md
|
171
|
+
- examples/rumale-kmeans.html
|
172
|
+
- examples/rumale-kmeans.md
|
173
|
+
- examples/rumale.html
|
174
|
+
- examples/rumale.md
|
175
|
+
- examples/table.html
|
176
|
+
- examples/table.md
|
177
|
+
- exe/rubydown
|
178
|
+
- lib/rubydown.rb
|
179
|
+
- lib/rubydown/version.rb
|
180
|
+
- rubydown.gemspec
|
181
|
+
- templates/template.html.erb
|
182
|
+
homepage: https://github.com/sciruby-jp/rubydown
|
183
|
+
licenses:
|
184
|
+
- MIT
|
185
|
+
metadata:
|
186
|
+
homepage_uri: https://github.com/sciruby-jp/rubydown
|
187
|
+
source_code_uri: https://github.com/sciruby-jp/rubydown
|
188
|
+
post_install_message:
|
189
|
+
rdoc_options: []
|
190
|
+
require_paths:
|
191
|
+
- lib
|
192
|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
193
|
+
requirements:
|
194
|
+
- - ">="
|
195
|
+
- !ruby/object:Gem::Version
|
196
|
+
version: '0'
|
197
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
198
|
+
requirements:
|
199
|
+
- - ">="
|
200
|
+
- !ruby/object:Gem::Version
|
201
|
+
version: '0'
|
202
|
+
requirements: []
|
203
|
+
rubygems_version: 3.0.3
|
204
|
+
signing_key:
|
205
|
+
specification_version: 4
|
206
|
+
summary: Pure Ruby R Markdown clone.
|
207
|
+
test_files: []
|