rubydown 0.1.0

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Files changed (51) hide show
  1. checksums.yaml +7 -0
  2. data/.circleci/config.yml +35 -0
  3. data/.gitignore +3 -0
  4. data/Dockerfile +9 -0
  5. data/Gemfile +8 -0
  6. data/Gemfile.lock +43 -0
  7. data/LICENSE +21 -0
  8. data/README.md +32 -0
  9. data/Rakefile +2 -0
  10. data/_config.yml +1 -0
  11. data/appveyor.yml +25 -0
  12. data/bin/console +14 -0
  13. data/bin/setup +8 -0
  14. data/docs/_config.yml +1 -0
  15. data/docs/index.html +20 -0
  16. data/docs/sidebyside.md +1 -0
  17. data/examples/bio.html +129 -0
  18. data/examples/bio.md +73 -0
  19. data/examples/graph.html +160 -0
  20. data/examples/graph.md +11 -0
  21. data/examples/index.html +217 -0
  22. data/examples/index.md +58 -0
  23. data/examples/numo-gnuplot.ipynb +1515 -0
  24. data/examples/rbplotly-bar.html +146 -0
  25. data/examples/rbplotly-bar.md +54 -0
  26. data/examples/rbplotly-basic.html +134 -0
  27. data/examples/rbplotly-basic.md +43 -0
  28. data/examples/rbplotly-boxplot.html +136 -0
  29. data/examples/rbplotly-boxplot.md +60 -0
  30. data/examples/rbplotly-heatmap.html +95 -0
  31. data/examples/rbplotly-heatmap.md +35 -0
  32. data/examples/rbplotly-hist.html +52 -0
  33. data/examples/rbplotly-hist.md +9 -0
  34. data/examples/rbplotly-line.html +62 -0
  35. data/examples/rbplotly-line.md +19 -0
  36. data/examples/rbplotly-pie.html +100 -0
  37. data/examples/rbplotly-pie.md +40 -0
  38. data/examples/rbplotly-scatter.html +148 -0
  39. data/examples/rbplotly-scatter.md +71 -0
  40. data/examples/rumale-kmeans.html +75 -0
  41. data/examples/rumale-kmeans.md +33 -0
  42. data/examples/rumale.html +967 -0
  43. data/examples/rumale.md +31 -0
  44. data/examples/table.html +57 -0
  45. data/examples/table.md +7 -0
  46. data/exe/rubydown +114 -0
  47. data/lib/rubydown.rb +59 -0
  48. data/lib/rubydown/version.rb +3 -0
  49. data/rubydown.gemspec +47 -0
  50. data/templates/template.html.erb +26 -0
  51. metadata +207 -0
data/examples/rumale.md ADDED
@@ -0,0 +1,31 @@
1
+ Rumale machine learning examples
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+
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+
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+ ~~~ruby
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+ require 'rumale'
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+ require 'rdatasets'
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+
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+ iris = RDatasets.load(:datasets, :iris)
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+
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+ iris_labels = iris['Species'].to_a
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+ encoder = Rumale::Preprocessing::LabelEncoder.new
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+ labels = encoder.fit_transform(iris_labels)
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+ p "hoge"
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+ ~~~
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+
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+ ~~~ruby
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+ samples = Numo::DFloat[*iris[0..3].to_matrix.to_a]
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+ ~~~
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+
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+ ~~~ruby
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+ model = Rumale::LinearModel::SVC.new(
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+ reg_param: 0.0001,
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+ fit_bias: true,
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+ max_iter: 3000,
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+ random_seed: 1
26
+ )
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+
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+ model.fit(samples, labels)
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+
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+ p model.predict(samples).to_a
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+ ~~~
data/examples/table.html ADDED
@@ -0,0 +1,57 @@
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+ <!DOCTYPE html>
2
+ <html>
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+ <head>
4
+ <meta name="viewport" content="width=device-width, initial-scale=1">
5
+ <link href='https://cdnjs.cloudflare.com/ajax/libs/github-markdown-css/2.10.0/github-markdown.min.css' rel='stylesheet' type='text/css' />
6
+ <style>
7
+ article.markdown-body {
8
+ box-sizing: border-box;
9
+ min-width: 200px;
10
+ max-width: 980px;
11
+ margin: 0 auto;
12
+ padding: 45px;
13
+ }
14
+
15
+ span.line-numbers {
16
+ display: none;
17
+ }
18
+ </style>
19
+ <script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js"></script>
20
+ </head>
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+ <body>
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+ <article class='markdown-body'>
23
+ <h1 id="table-generation-example">Table generation example</h1>
24
+
25
+ <h2 id="with-numonarrayhttpsgithubcomruby-numonumo-narray">With <a href="https://github.com/ruby-numo/numo-narray">Numo::Narray</a></h2>
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+
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+ <pre><code class="language-ruby">a = Numo::DFloat.new(3, 5).seq
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+ </code></pre>
29
+ <table>
30
+ <tbody>
31
+ <tr>
32
+ <td>0.0</td>
33
+ <td>1.0</td>
34
+ <td>2.0</td>
35
+ <td>3.0</td>
36
+ <td>4.0</td>
37
+ </tr>
38
+ <tr>
39
+ <td>5.0</td>
40
+ <td>6.0</td>
41
+ <td>7.0</td>
42
+ <td>8.0</td>
43
+ <td>9.0</td>
44
+ </tr>
45
+ <tr>
46
+ <td>10.0</td>
47
+ <td>11.0</td>
48
+ <td>12.0</td>
49
+ <td>13.0</td>
50
+ <td>14.0</td>
51
+ </tr>
52
+ </tbody>
53
+ </table>
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+
55
+ </article>
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+ </body>
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+ </html>
data/examples/table.md ADDED
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+ # Table generation example
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+
3
+ ## With [Numo::Narray](https://github.com/ruby-numo/numo-narray)
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+
5
+ ~~~ruby
6
+ a = Numo::DFloat.new(3, 5).seq
7
+ ~~~
data/exe/rubydown ADDED
@@ -0,0 +1,114 @@
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+ #! /usr/bin/env ruby
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+
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+ require 'kramdown'
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+ require 'erb'
5
+ require 'stringio'
6
+
7
+ require 'optparse'
8
+
9
+ require 'rubydown'
10
+
11
+ def get_context
12
+ binding
13
+ end
14
+
15
+ class EvalDoc < Kramdown::Document
16
+ attr_accessor :context, :stdout
17
+
18
+ def initialize(text, *opts)
19
+ super(text, *opts)
20
+
21
+ self.context = get_context
22
+ self.root = scan_el(self.root)
23
+ end
24
+
25
+ private
26
+ def scan_el(el)
27
+ new_children = []
28
+ el.children.each do |child_el|
29
+ child_el = scan_el(child_el)
30
+ new_children << child_el
31
+
32
+ is_code = child_el.type == :codeblock || child_el.type == :codespan
33
+
34
+ if is_code && child_el.options[:lang] == 'ruby'
35
+ code = child_el.value.gsub(/^ *ruby *\n/, '')
36
+ new_children << eval_and_elementize(code)
37
+ end
38
+ end
39
+
40
+ el.children = new_children
41
+
42
+ return el
43
+ end
44
+
45
+ def eval_and_elementize(code)
46
+ stdout = StringIO.new
47
+
48
+ $stdout = stdout
49
+ eval_result = self.context.eval(code)
50
+ $stdout = STDOUT
51
+
52
+ stdout_string = stdout.string.empty? ? '' : stdout.string + "\n"
53
+
54
+ case
55
+ when eval_result.respond_to?(:to_html)
56
+ Kramdown::Document.new(eval_result.to_html, input: :html).root
57
+ else
58
+ text_result_el(stdout_string + "=> #{eval_result}")
59
+ end
60
+ end
61
+
62
+ def text_result_el(text)
63
+ text_el = Kramdown::Element.new(:codeblock, text)
64
+ p_el = Kramdown::Element.new(:p)
65
+ p_el.children << text_el
66
+ p_el
67
+ end
68
+ end
69
+
70
+ def main # to separate binding
71
+
72
+ options = {}
73
+ options[:erb] = File.expand_path('../../templates/template.html.erb', __FILE__)
74
+ option_parser = OptionParser.new do |opts|
75
+ opts.on("-i INPUT", "Input form the file") do |input|
76
+ options[:input] = input
77
+ end
78
+ opts.on("-e ERB", "Specify template file") do |erb|
79
+ options[:erb] = erb
80
+ end
81
+ opts.on("-o OUTPUT", "Output html to OUTPUT") do |output|
82
+ options[:output] = output
83
+ end
84
+ opts.on("-h", "--help", "Prints this help") do
85
+ puts opts
86
+ exit
87
+ end
88
+ opts.on_tail("--version", "Show version") do
89
+ puts Rubydown::VERSION
90
+ exit
91
+ end
92
+ end
93
+
94
+ option_parser.parse!
95
+ # puts options.inspect
96
+ # puts options[:input]
97
+ # puts options[:erb]
98
+ # puts options[:output]
99
+
100
+ case options[:input]
101
+ when /\.md\z/i
102
+ options[:output] ||= options[:input].sub(/\.md\z/i, '.html')
103
+ when /./
104
+ abort("Input file must be markdown (*.md)")
105
+ else
106
+ abort(option_parser.help)
107
+ end
108
+
109
+ doc = EvalDoc.new(File.read(options[:input], encoding: 'utf-8')) # using in ERB
110
+ File.write(options[:output], ERB.new(File.read(options[:erb])).result(binding))
111
+ # puts ERB.new(File.read(options[:erb])).result(binding)
112
+ end
113
+
114
+ main
data/lib/rubydown.rb ADDED
@@ -0,0 +1,59 @@
1
+ require "rubydown/version"
2
+
3
+ require 'numo/narray'
4
+ require 'rbplotly'
5
+ require 'numo/gnuplot'
6
+ require 'base64'
7
+ require 'tempfile'
8
+
9
+
10
+ class Numo::NArray
11
+ def to_html
12
+ rows = self.to_a.map do |row|
13
+ elems = row.map do |elem|
14
+ "<td>#{elem}</td>"
15
+ end
16
+ "<tr>#{elems.join}</tr>"
17
+ end
18
+ "<table>#{rows.join}</table>"
19
+ end
20
+ end
21
+
22
+ class Numo::Int32
23
+ def to_html
24
+ <<-HTML
25
+ #{self.to_a}
26
+ HTML
27
+ end
28
+ end
29
+
30
+ module Rubydown
31
+ class RbMarkPlot < Numo::Gnuplot
32
+ def plot(*args)
33
+ super(*args)
34
+ self
35
+ end
36
+
37
+ def splot(*args)
38
+ super(*args)
39
+ self
40
+ end
41
+
42
+ def _plot_splot(*args)
43
+ @tempfile = Tempfile.open(['plot', '.png'])
44
+ set terminal: 'png'
45
+ set output: @tempfile.path
46
+ super(*args)
47
+ end
48
+
49
+ def to_html
50
+ img_b64 = Base64.encode64(File.binread(@tempfile))
51
+ <<-HTML
52
+ <img src='data:image/png;base64,#{img_b64}' />
53
+ HTML
54
+ end
55
+ end
56
+
57
+ class Error < StandardError; end
58
+ # Your code goes here...
59
+ end
data/lib/rubydown/version.rb ADDED
@@ -0,0 +1,3 @@
1
+ module Rubydown
2
+ VERSION = "0.1.0"
3
+ end
data/rubydown.gemspec ADDED
@@ -0,0 +1,47 @@
1
+
2
+ lib = File.expand_path("../lib", __FILE__)
3
+ $LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
4
+ require "rubydown/version"
5
+
6
+ Gem::Specification.new do |spec|
7
+ spec.name = "rubydown"
8
+ spec.version = Rubydown::VERSION
9
+ spec.authors = ["Kozo Nishida"]
10
+ spec.email = ["knishida@riken.jp"]
11
+ spec.license = 'MIT'
12
+ spec.summary = "Pure Ruby R Markdown clone."
13
+ spec.description = "rubydown is R Markdown clone for Rubyists."
14
+ spec.homepage = "https://github.com/sciruby-jp/rubydown"
15
+
16
+ # Prevent pushing this gem to RubyGems.org. To allow pushes either set the 'allowed_push_host'
17
+ # to allow pushing to a single host or delete this section to allow pushing to any host.
18
+ if spec.respond_to?(:metadata)
19
+ # spec.metadata["allowed_push_host"] = "TODO: Set to 'http://mygemserver.com'"
20
+
21
+ spec.metadata["homepage_uri"] = spec.homepage
22
+ spec.metadata["source_code_uri"] = "https://github.com/sciruby-jp/rubydown"
23
+ # spec.metadata["changelog_uri"] = "https//github.com/sciruby-jp/rubydown/blob/master/CHANGELOG.md"
24
+ else
25
+ raise "RubyGems 2.0 or newer is required to protect against " \
26
+ "public gem pushes."
27
+ end
28
+
29
+ # Specify which files should be added to the gem when it is released.
30
+ # The `git ls-files -z` loads the files in the RubyGem that have been added into git.
31
+ spec.files = Dir.chdir(File.expand_path('..', __FILE__)) do
32
+ `git ls-files -z`.split("\x0").reject { |f| f.match(%r{^(test|spec|features)/}) }
33
+ end
34
+ spec.bindir = "exe"
35
+ spec.executables = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
36
+ spec.require_paths = ["lib"]
37
+
38
+ spec.add_dependency "kramdown", "~> 2.1"
39
+ spec.add_dependency "daru", "~> 0.2"
40
+ spec.add_dependency "numo-narray", "~> 0.9.1"
41
+ spec.add_dependency "numo-gnuplot", "~> 0.2.4"
42
+ spec.add_dependency "rbplotly", "~> 0.1.2"
43
+
44
+ spec.add_development_dependency "bundler", "~> 1.17"
45
+ spec.add_development_dependency "rake", "~> 10.0"
46
+ spec.add_development_dependency "test-unit", "~> 3.3"
47
+ end
data/templates/template.html.erb ADDED
@@ -0,0 +1,26 @@
1
+ <!DOCTYPE html>
2
+ <html>
3
+ <head>
4
+ <meta name="viewport" content="width=device-width, initial-scale=1">
5
+ <link href='https://cdnjs.cloudflare.com/ajax/libs/github-markdown-css/2.10.0/github-markdown.min.css' rel='stylesheet' type='text/css' />
6
+ <style>
7
+ article.markdown-body {
8
+ box-sizing: border-box;
9
+ min-width: 200px;
10
+ max-width: 980px;
11
+ margin: 0 auto;
12
+ padding: 45px;
13
+ }
14
+
15
+ span.line-numbers {
16
+ display: none;
17
+ }
18
+ </style>
19
+ <script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js"></script>
20
+ </head>
21
+ <body>
22
+ <article class='markdown-body'>
23
+ <%= doc.to_html %>
24
+ </article>
25
+ </body>
26
+ </html>
metadata ADDED
@@ -0,0 +1,207 @@
1
+ --- !ruby/object:Gem::Specification
2
+ name: rubydown
3
+ version: !ruby/object:Gem::Version
4
+ version: 0.1.0
5
+ platform: ruby
6
+ authors:
7
+ - Kozo Nishida
8
+ autorequire:
9
+ bindir: exe
10
+ cert_chain: []
11
+ date: 2019-03-10 00:00:00.000000000 Z
12
+ dependencies:
13
+ - !ruby/object:Gem::Dependency
14
+ name: kramdown
15
+ requirement: !ruby/object:Gem::Requirement
16
+ requirements:
17
+ - - "~>"
18
+ - !ruby/object:Gem::Version
19
+ version: '2.1'
20
+ type: :runtime
21
+ prerelease: false
22
+ version_requirements: !ruby/object:Gem::Requirement
23
+ requirements:
24
+ - - "~>"
25
+ - !ruby/object:Gem::Version
26
+ version: '2.1'
27
+ - !ruby/object:Gem::Dependency
28
+ name: daru
29
+ requirement: !ruby/object:Gem::Requirement
30
+ requirements:
31
+ - - "~>"
32
+ - !ruby/object:Gem::Version
33
+ version: '0.2'
34
+ type: :runtime
35
+ prerelease: false
36
+ version_requirements: !ruby/object:Gem::Requirement
37
+ requirements:
38
+ - - "~>"
39
+ - !ruby/object:Gem::Version
40
+ version: '0.2'
41
+ - !ruby/object:Gem::Dependency
42
+ name: numo-narray
43
+ requirement: !ruby/object:Gem::Requirement
44
+ requirements:
45
+ - - "~>"
46
+ - !ruby/object:Gem::Version
47
+ version: 0.9.1
48
+ type: :runtime
49
+ prerelease: false
50
+ version_requirements: !ruby/object:Gem::Requirement
51
+ requirements:
52
+ - - "~>"
53
+ - !ruby/object:Gem::Version
54
+ version: 0.9.1
55
+ - !ruby/object:Gem::Dependency
56
+ name: numo-gnuplot
57
+ requirement: !ruby/object:Gem::Requirement
58
+ requirements:
59
+ - - "~>"
60
+ - !ruby/object:Gem::Version
61
+ version: 0.2.4
62
+ type: :runtime
63
+ prerelease: false
64
+ version_requirements: !ruby/object:Gem::Requirement
65
+ requirements:
66
+ - - "~>"
67
+ - !ruby/object:Gem::Version
68
+ version: 0.2.4
69
+ - !ruby/object:Gem::Dependency
70
+ name: rbplotly
71
+ requirement: !ruby/object:Gem::Requirement
72
+ requirements:
73
+ - - "~>"
74
+ - !ruby/object:Gem::Version
75
+ version: 0.1.2
76
+ type: :runtime
77
+ prerelease: false
78
+ version_requirements: !ruby/object:Gem::Requirement
79
+ requirements:
80
+ - - "~>"
81
+ - !ruby/object:Gem::Version
82
+ version: 0.1.2
83
+ - !ruby/object:Gem::Dependency
84
+ name: bundler
85
+ requirement: !ruby/object:Gem::Requirement
86
+ requirements:
87
+ - - "~>"
88
+ - !ruby/object:Gem::Version
89
+ version: '1.17'
90
+ type: :development
91
+ prerelease: false
92
+ version_requirements: !ruby/object:Gem::Requirement
93
+ requirements:
94
+ - - "~>"
95
+ - !ruby/object:Gem::Version
96
+ version: '1.17'
97
+ - !ruby/object:Gem::Dependency
98
+ name: rake
99
+ requirement: !ruby/object:Gem::Requirement
100
+ requirements:
101
+ - - "~>"
102
+ - !ruby/object:Gem::Version
103
+ version: '10.0'
104
+ type: :development
105
+ prerelease: false
106
+ version_requirements: !ruby/object:Gem::Requirement
107
+ requirements:
108
+ - - "~>"
109
+ - !ruby/object:Gem::Version
110
+ version: '10.0'
111
+ - !ruby/object:Gem::Dependency
112
+ name: test-unit
113
+ requirement: !ruby/object:Gem::Requirement
114
+ requirements:
115
+ - - "~>"
116
+ - !ruby/object:Gem::Version
117
+ version: '3.3'
118
+ type: :development
119
+ prerelease: false
120
+ version_requirements: !ruby/object:Gem::Requirement
121
+ requirements:
122
+ - - "~>"
123
+ - !ruby/object:Gem::Version
124
+ version: '3.3'
125
+ description: rubydown is R Markdown clone for Rubyists.
126
+ email:
127
+ - knishida@riken.jp
128
+ executables:
129
+ - rubydown
130
+ extensions: []
131
+ extra_rdoc_files: []
132
+ files:
133
+ - ".circleci/config.yml"
134
+ - ".gitignore"
135
+ - Dockerfile
136
+ - Gemfile
137
+ - Gemfile.lock
138
+ - LICENSE
139
+ - README.md
140
+ - Rakefile
141
+ - _config.yml
142
+ - appveyor.yml
143
+ - bin/console
144
+ - bin/setup
145
+ - docs/_config.yml
146
+ - docs/index.html
147
+ - docs/sidebyside.md
148
+ - examples/bio.html
149
+ - examples/bio.md
150
+ - examples/graph.html
151
+ - examples/graph.md
152
+ - examples/index.html
153
+ - examples/index.md
154
+ - examples/numo-gnuplot.ipynb
155
+ - examples/rbplotly-bar.html
156
+ - examples/rbplotly-bar.md
157
+ - examples/rbplotly-basic.html
158
+ - examples/rbplotly-basic.md
159
+ - examples/rbplotly-boxplot.html
160
+ - examples/rbplotly-boxplot.md
161
+ - examples/rbplotly-heatmap.html
162
+ - examples/rbplotly-heatmap.md
163
+ - examples/rbplotly-hist.html
164
+ - examples/rbplotly-hist.md
165
+ - examples/rbplotly-line.html
166
+ - examples/rbplotly-line.md
167
+ - examples/rbplotly-pie.html
168
+ - examples/rbplotly-pie.md
169
+ - examples/rbplotly-scatter.html
170
+ - examples/rbplotly-scatter.md
171
+ - examples/rumale-kmeans.html
172
+ - examples/rumale-kmeans.md
173
+ - examples/rumale.html
174
+ - examples/rumale.md
175
+ - examples/table.html
176
+ - examples/table.md
177
+ - exe/rubydown
178
+ - lib/rubydown.rb
179
+ - lib/rubydown/version.rb
180
+ - rubydown.gemspec
181
+ - templates/template.html.erb
182
+ homepage: https://github.com/sciruby-jp/rubydown
183
+ licenses:
184
+ - MIT
185
+ metadata:
186
+ homepage_uri: https://github.com/sciruby-jp/rubydown
187
+ source_code_uri: https://github.com/sciruby-jp/rubydown
188
+ post_install_message:
189
+ rdoc_options: []
190
+ require_paths:
191
+ - lib
192
+ required_ruby_version: !ruby/object:Gem::Requirement
193
+ requirements:
194
+ - - ">="
195
+ - !ruby/object:Gem::Version
196
+ version: '0'
197
+ required_rubygems_version: !ruby/object:Gem::Requirement
198
+ requirements:
199
+ - - ">="
200
+ - !ruby/object:Gem::Version
201
+ version: '0'
202
+ requirements: []
203
+ rubygems_version: 3.0.3
204
+ signing_key:
205
+ specification_version: 4
206
+ summary: Pure Ruby R Markdown clone.
207
+ test_files: []