ruby_astm 1.1.4 → 1.1.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/mappings.json +118 -59
- data/lib/ruby_astm/result.rb +9 -0
- metadata +1 -1
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA256:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: 433fd3c434412d3e8e82a0aec5f7ea4d02171ec6eb4114f40ba6683167ce76ef
|
|
4
|
+
data.tar.gz: 10f9cbfd6ab7153bf671e0e67709dd1a24faea4f430c5c53a9f8089a3f7c0496
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: 453b97c83bfa1c3ab8901a7988168de09f9d97332a69d8a4efb69a783fbf467e28c5d04d620a997400719b8846489f3e71802ec3645546ec31e11b6b8c0db22e
|
|
7
|
+
data.tar.gz: 89def7573598d2b8aef88ee880223bc6b03aed1f835abe044a52d2fa05a37bdaa85d55fb8a4b2248d4618a44394613b359157fd753a1973ceebfd6882a51ca54
|
data/lib/mappings.json
CHANGED
|
@@ -4,242 +4,301 @@
|
|
|
4
4
|
{
|
|
5
5
|
"LIS_CODE" : "TLCparam",
|
|
6
6
|
"TUBE" : "EDTA",
|
|
7
|
-
"TRANSFORM" : "(self.value.to_f*1000).to_i.to_s"
|
|
7
|
+
"TRANSFORM" : "(self.value.to_f*1000).to_i.to_s",
|
|
8
|
+
"REPORT_NAME" : "Hemogram"
|
|
8
9
|
},
|
|
9
10
|
"RBC" :
|
|
10
11
|
{
|
|
11
12
|
"LIS_CODE" : "RBCparam",
|
|
12
|
-
"TUBE" : "EDTA"
|
|
13
|
+
"TUBE" : "EDTA",
|
|
14
|
+
"REPORT_NAME" : "Hemogram"
|
|
13
15
|
},
|
|
14
16
|
"HGB" :
|
|
15
17
|
{
|
|
16
18
|
"LIS_CODE" : "HBparam",
|
|
17
|
-
"TUBE" : "EDTA"
|
|
19
|
+
"TUBE" : "EDTA",
|
|
20
|
+
"REPORT_NAME" : "Hemogram"
|
|
18
21
|
},
|
|
19
22
|
"HCT" : {
|
|
20
23
|
"LIS_CODE" : "HCTparam",
|
|
21
|
-
"TUBE" : "EDTA"
|
|
24
|
+
"TUBE" : "EDTA",
|
|
25
|
+
"REPORT_NAME" : "Hemogram"
|
|
22
26
|
},
|
|
23
27
|
"MCV" :
|
|
24
28
|
{
|
|
25
29
|
"LIS_CODE" : "MCVparam",
|
|
26
|
-
"TUBE" : "EDTA"
|
|
30
|
+
"TUBE" : "EDTA",
|
|
31
|
+
"REPORT_NAME" : "Hemogram"
|
|
27
32
|
},
|
|
28
33
|
"MCH" : {
|
|
29
34
|
"LIS_CODE" : "MCHparam",
|
|
30
|
-
"TUBE" : "EDTA"
|
|
35
|
+
"TUBE" : "EDTA",
|
|
36
|
+
"REPORT_NAME" : "Hemogram"
|
|
31
37
|
},
|
|
32
38
|
"MCHC": {
|
|
33
39
|
"LIS_CODE" : "MCHCparam",
|
|
34
|
-
"TUBE" : "EDTA"
|
|
40
|
+
"TUBE" : "EDTA",
|
|
41
|
+
"REPORT_NAME" : "Hemogram"
|
|
35
42
|
},
|
|
36
43
|
"PLT" : {
|
|
37
44
|
"LIS_CODE" : "PCparam",
|
|
38
45
|
"TUBE" : "EDTA",
|
|
39
|
-
"TRANSFORM" : "(self.value.to_f*1000).to_i.to_s"
|
|
46
|
+
"TRANSFORM" : "(self.value.to_f*1000).to_i.to_s",
|
|
47
|
+
"REPORT_NAME" : "Hemogram"
|
|
40
48
|
},
|
|
41
49
|
"NEUT%": {
|
|
42
50
|
"LIS_CODE" : "Nparam",
|
|
43
|
-
"TUBE" : "EDTA"
|
|
51
|
+
"TUBE" : "EDTA",
|
|
52
|
+
"REPORT_NAME" : "Hemogram"
|
|
44
53
|
},
|
|
45
54
|
"LYMPH%": {
|
|
46
55
|
"LIS_CODE" : "Lparam",
|
|
47
|
-
"TUBE" : "EDTA"
|
|
56
|
+
"TUBE" : "EDTA",
|
|
57
|
+
"REPORT_NAME" : "Hemogram"
|
|
48
58
|
},
|
|
49
59
|
"MONO%": {
|
|
50
60
|
"LIS_CODE" : "Mparam",
|
|
51
|
-
"TUBE" : "EDTA"
|
|
61
|
+
"TUBE" : "EDTA",
|
|
62
|
+
"REPORT_NAME" : "Hemogram"
|
|
52
63
|
},
|
|
53
64
|
"EO%": {
|
|
54
65
|
"LIS_CODE" : "Eparam",
|
|
55
|
-
"TUBE" : "EDTA"
|
|
66
|
+
"TUBE" : "EDTA",
|
|
67
|
+
"REPORT_NAME" : "Hemogram"
|
|
56
68
|
},
|
|
57
69
|
"BASO%": {
|
|
58
70
|
"LIS_CODE" : "BASOparam",
|
|
59
|
-
"TUBE" : "EDTA"
|
|
71
|
+
"TUBE" : "EDTA",
|
|
72
|
+
"REPORT_NAME" : "Hemogram"
|
|
60
73
|
},
|
|
61
74
|
"NEUT#": {
|
|
62
75
|
"LIS_CODE" : "ANCparam",
|
|
63
|
-
"TUBE" : "EDTA"
|
|
76
|
+
"TUBE" : "EDTA",
|
|
77
|
+
"REPORT_NAME" : "Hemogram"
|
|
64
78
|
},
|
|
65
79
|
"LYMPH#": {
|
|
66
80
|
"LIS_CODE" : "ALCparam",
|
|
67
|
-
"TUBE" : "EDTA"
|
|
81
|
+
"TUBE" : "EDTA",
|
|
82
|
+
"REPORT_NAME" : "Hemogram"
|
|
68
83
|
},
|
|
69
84
|
"MONO#": {
|
|
70
85
|
"LIS_CODE" : "AMCparam",
|
|
71
|
-
"TUBE" : "EDTA"
|
|
86
|
+
"TUBE" : "EDTA",
|
|
87
|
+
"REPORT_NAME" : "Hemogram"
|
|
72
88
|
},
|
|
73
89
|
"EO#": {
|
|
74
90
|
"LIS_CODE" : "AECparam",
|
|
75
|
-
"TUBE" : "EDTA"
|
|
91
|
+
"TUBE" : "EDTA",
|
|
92
|
+
"REPORT_NAME" : "Hemogram"
|
|
76
93
|
},
|
|
77
94
|
"BASO#": {
|
|
78
95
|
"LIS_CODE" : "ABCparam",
|
|
79
|
-
"TUBE" : "EDTA"
|
|
96
|
+
"TUBE" : "EDTA",
|
|
97
|
+
"REPORT_NAME" : "Hemogram"
|
|
80
98
|
},
|
|
81
99
|
"RDW-CV": {
|
|
82
100
|
"LIS_CODE" : "RDWCVparam",
|
|
83
|
-
"TUBE" : "EDTA"
|
|
101
|
+
"TUBE" : "EDTA",
|
|
102
|
+
"REPORT_NAME" : "Hemogram"
|
|
84
103
|
},
|
|
85
104
|
"GLUR" : {
|
|
86
105
|
"LIS_CODE" : "GLUR",
|
|
87
|
-
"TUBE" : "FLUORIDE"
|
|
106
|
+
"TUBE" : "FLUORIDE",
|
|
107
|
+
"REPORT_NAME" : "Random Glucose"
|
|
88
108
|
},
|
|
89
109
|
"GLUPP" : {
|
|
90
110
|
"LIS_CODE" : "GLUPP",
|
|
91
|
-
"TUBE" : "FLUORIDE"
|
|
111
|
+
"TUBE" : "FLUORIDE",
|
|
112
|
+
"REPORT_NAME" : "Post Prandial Glucose"
|
|
92
113
|
},
|
|
93
114
|
"GLUF" : {
|
|
94
115
|
"LIS_CODE" : "GLUF",
|
|
95
|
-
"TUBE" : "FLUORIDE"
|
|
116
|
+
"TUBE" : "FLUORIDE",
|
|
117
|
+
"REPORT_NAME" : "Fasting Glucose"
|
|
96
118
|
},
|
|
97
119
|
"CHOL" : {
|
|
98
120
|
"LIS_CODE" : "CHOL",
|
|
99
|
-
"TUBE" : "SERUM"
|
|
121
|
+
"TUBE" : "SERUM",
|
|
122
|
+
"REPORT_NAME" : "Cholesterol"
|
|
100
123
|
},
|
|
101
124
|
"TRIG" : {
|
|
102
125
|
"LIS_CODE" : "TRIG",
|
|
103
|
-
"TUBE" : "SERUM"
|
|
126
|
+
"TUBE" : "SERUM",
|
|
127
|
+
"REPORT_NAME" : "Triglycerides"
|
|
104
128
|
},
|
|
105
129
|
"HDLC" : {
|
|
106
130
|
"LIS_CODE" : "HDLC",
|
|
107
|
-
"TUBE" : "SERUM"
|
|
131
|
+
"TUBE" : "SERUM",
|
|
132
|
+
"REPORT_NAME" : "HDLC"
|
|
108
133
|
},
|
|
109
134
|
"LDL" : {
|
|
110
135
|
"LIS_CODE" : "LDL",
|
|
111
|
-
"TUBE" : "SERUM"
|
|
136
|
+
"TUBE" : "SERUM",
|
|
137
|
+
"REPORT_NAME" : "LDL"
|
|
112
138
|
},
|
|
113
139
|
"VLDL" : {
|
|
114
140
|
"LIS_CODE" : "VLDL",
|
|
115
|
-
"TUBE" : "SERUM"
|
|
141
|
+
"TUBE" : "SERUM",
|
|
142
|
+
"REPORT_NAME" : "VLDL"
|
|
116
143
|
},
|
|
117
144
|
"CRE" : {
|
|
118
145
|
"LIS_CODE" : "CRE",
|
|
119
|
-
"TUBE" : "SERUM"
|
|
146
|
+
"TUBE" : "SERUM",
|
|
147
|
+
"REPORT_NAME" : "Creatinine"
|
|
120
148
|
},
|
|
121
149
|
"UREA" : {
|
|
122
150
|
"LIS_CODE" : "UREA",
|
|
123
|
-
"TUBE" : "SERUM"
|
|
151
|
+
"TUBE" : "SERUM",
|
|
152
|
+
"REPORT_NAME" : "Urea"
|
|
124
153
|
},
|
|
125
154
|
"BUN" : {
|
|
126
155
|
"LIS_CODE" : "BUN",
|
|
127
|
-
"TUBE" : "SERUM"
|
|
156
|
+
"TUBE" : "SERUM",
|
|
157
|
+
"REPORT_NAME" : "Blood Urea Nitrogen"
|
|
128
158
|
},
|
|
129
159
|
"ALB" : {
|
|
130
160
|
"LIS_CODE" : "ALB",
|
|
131
|
-
"TUBE" : "SERUM"
|
|
161
|
+
"TUBE" : "SERUM",
|
|
162
|
+
"REPORT_NAME" : "Albumin"
|
|
132
163
|
},
|
|
133
164
|
"GGT" : {
|
|
134
165
|
"LIS_CODE" : "GGT",
|
|
135
|
-
"TUBE" : "SERUM"
|
|
166
|
+
"TUBE" : "SERUM",
|
|
167
|
+
"REPORT_NAME" : "GGT"
|
|
136
168
|
},
|
|
137
169
|
"BID" : {
|
|
138
170
|
"LIS_CODE" : "BID",
|
|
139
|
-
"TUBE" : "SERUM"
|
|
171
|
+
"TUBE" : "SERUM",
|
|
172
|
+
"REPORT_NAME" : "Direct Bilirubin"
|
|
140
173
|
},
|
|
141
174
|
"BIT" : {
|
|
142
175
|
"LIS_CODE" : "BIT",
|
|
143
|
-
"TUBE" : "SERUM"
|
|
176
|
+
"TUBE" : "SERUM",
|
|
177
|
+
"REPORT_NAME" : "Total Bilirubin"
|
|
144
178
|
},
|
|
145
179
|
"ALPU" : {
|
|
146
180
|
"LIS_CODE" : "ALPU",
|
|
147
|
-
"TUBE" : "SERUM"
|
|
181
|
+
"TUBE" : "SERUM",
|
|
182
|
+
"REPORT_NAME" : "Alkaline Phosphatase"
|
|
148
183
|
},
|
|
149
184
|
"GOTHL" : {
|
|
150
185
|
"LIS_CODE" : "GOTHL",
|
|
151
|
-
"TUBE" : "SERUM"
|
|
186
|
+
"TUBE" : "SERUM",
|
|
187
|
+
"REPORT_NAME" : "SGOT"
|
|
152
188
|
},
|
|
153
189
|
"GPTHL" : {
|
|
154
190
|
"LIS_CODE" : "GPTHL",
|
|
155
|
-
"TUBE" : "SERUM"
|
|
191
|
+
"TUBE" : "SERUM",
|
|
192
|
+
"REPORT_NAME" : "SGPT"
|
|
156
193
|
},
|
|
157
194
|
"HOMOCY" : {
|
|
158
195
|
"LIS_CODE" : "HOMOCY",
|
|
159
|
-
"TUBE" : "SERUM"
|
|
196
|
+
"TUBE" : "SERUM",
|
|
197
|
+
"REPORT_NAME" : "Homocysteine"
|
|
160
198
|
},
|
|
161
199
|
"8" : {
|
|
162
200
|
"LIS_CODE" : "TSH",
|
|
163
|
-
"TUBE" : "SERUM"
|
|
201
|
+
"TUBE" : "SERUM",
|
|
202
|
+
"REPORT_NAME" : "TSH"
|
|
164
203
|
},
|
|
165
204
|
"7" : {
|
|
166
205
|
"LIS_CODE" : "T4",
|
|
167
|
-
"TUBE" : "SERUM"
|
|
206
|
+
"TUBE" : "SERUM",
|
|
207
|
+
"REPORT_NAME" : "T4"
|
|
168
208
|
},
|
|
169
209
|
"6" : {
|
|
170
210
|
"LIS_CODE" : "T3",
|
|
171
|
-
"TUBE" : "SERUM"
|
|
211
|
+
"TUBE" : "SERUM",
|
|
212
|
+
"REPORT_NAME" : "T3"
|
|
172
213
|
},
|
|
173
214
|
"5" : {
|
|
174
215
|
"LIS_CODE" : "HIV",
|
|
175
|
-
"TUBE" : "PLASMA"
|
|
216
|
+
"TUBE" : "PLASMA",
|
|
217
|
+
"REPORT_NAME" : "HIV Screening"
|
|
176
218
|
},
|
|
177
219
|
"4" : {
|
|
178
220
|
"LIS_CODE" : "HBS",
|
|
179
|
-
"TUBE" : "PLASMA"
|
|
221
|
+
"TUBE" : "PLASMA",
|
|
222
|
+
"REPORT_NAME" : "HBV Screening"
|
|
180
223
|
},
|
|
181
224
|
"3" : {
|
|
182
225
|
"LIS_CODE" : "VITD",
|
|
183
|
-
"TUBE" : "SERUM"
|
|
226
|
+
"TUBE" : "SERUM",
|
|
227
|
+
"REPORT_NAME" : "Vitamin D"
|
|
184
228
|
},
|
|
185
229
|
"2" : {
|
|
186
230
|
"LIS_CODE" : "HCV",
|
|
187
|
-
"TUBE" : "PLASMA"
|
|
231
|
+
"TUBE" : "PLASMA",
|
|
232
|
+
"REPORT_NAME" : "HCV Screening"
|
|
188
233
|
},
|
|
189
234
|
"1" : {
|
|
190
235
|
"LIS_CODE" : "B12",
|
|
191
|
-
"TUBE" : "SERUM"
|
|
236
|
+
"TUBE" : "SERUM",
|
|
237
|
+
"REPORT_NAME" : "Vitamin B12"
|
|
192
238
|
},
|
|
193
239
|
"ESR" : {
|
|
194
240
|
"LIS_CODE" : "ESR",
|
|
195
|
-
"TUBE" : "ESR"
|
|
241
|
+
"TUBE" : "ESR",
|
|
242
|
+
"REPORT_NAME" : "ESR"
|
|
196
243
|
},
|
|
197
244
|
"GLU" : {
|
|
198
245
|
"LIS_CODE" : "GLU",
|
|
199
|
-
"TUBE" : "URINE_CONTAINER"
|
|
246
|
+
"TUBE" : "URINE_CONTAINER",
|
|
247
|
+
"REPORT_NAME" : "Urine Routine"
|
|
200
248
|
},
|
|
201
249
|
"BIL" : {
|
|
202
250
|
"LIS_CODE" : "BIL",
|
|
203
|
-
"TUBE" : "URINE_CONTAINER"
|
|
251
|
+
"TUBE" : "URINE_CONTAINER",
|
|
252
|
+
"REPORT_NAME" : "Urine Routine"
|
|
204
253
|
},
|
|
205
254
|
"KET" : {
|
|
206
255
|
"LIS_CODE" : "KET",
|
|
207
|
-
"TUBE" : "URINE_CONTAINER"
|
|
256
|
+
"TUBE" : "URINE_CONTAINER",
|
|
257
|
+
"REPORT_NAME" : "Urine Routine"
|
|
208
258
|
},
|
|
209
259
|
"SG" : {
|
|
210
260
|
"LIS_CODE" : "SG",
|
|
211
|
-
"TUBE" : "URINE_CONTAINER"
|
|
261
|
+
"TUBE" : "URINE_CONTAINER",
|
|
262
|
+
"REPORT_NAME" : "Urine Routine"
|
|
212
263
|
},
|
|
213
264
|
"BLO" : {
|
|
214
265
|
"LIS_CODE" : "BLO",
|
|
215
|
-
"TUBE" : "URINE_CONTAINER"
|
|
266
|
+
"TUBE" : "URINE_CONTAINER",
|
|
267
|
+
"REPORT_NAME" : "Urine Routine"
|
|
216
268
|
},
|
|
217
269
|
"pH" : {
|
|
218
270
|
"LIS_CODE" : "pH",
|
|
219
|
-
"TUBE" : "URINE_CONTAINER"
|
|
271
|
+
"TUBE" : "URINE_CONTAINER",
|
|
272
|
+
"REPORT_NAME" : "Urine Routine"
|
|
220
273
|
},
|
|
221
274
|
"PRO" : {
|
|
222
275
|
"LIS_CODE" : "PRO",
|
|
223
|
-
"TUBE" : "URINE_CONTAINER"
|
|
276
|
+
"TUBE" : "URINE_CONTAINER",
|
|
277
|
+
"REPORT_NAME" : "Urine Routine"
|
|
224
278
|
},
|
|
225
279
|
"URO" : {
|
|
226
280
|
"LIS_CODE" : "URO",
|
|
227
|
-
"TUBE" : "URINE_CONTAINER"
|
|
281
|
+
"TUBE" : "URINE_CONTAINER",
|
|
282
|
+
"REPORT_NAME" : "Urine Routine"
|
|
228
283
|
},
|
|
229
284
|
"NIT" : {
|
|
230
285
|
"LIS_CODE" : "NIT",
|
|
231
|
-
"TUBE" : "URINE_CONTAINER"
|
|
286
|
+
"TUBE" : "URINE_CONTAINER",
|
|
287
|
+
"REPORT_NAME" : "Urine Routine"
|
|
232
288
|
},
|
|
233
289
|
"LEU" : {
|
|
234
290
|
"LIS_CODE" : "LEU",
|
|
235
|
-
"TUBE" : "URINE_CONTAINER"
|
|
291
|
+
"TUBE" : "URINE_CONTAINER",
|
|
292
|
+
"REPORT_NAME" : "Urine Routine"
|
|
236
293
|
},
|
|
237
294
|
"COL" : {
|
|
238
295
|
"LIS_CODE" : "COL",
|
|
239
|
-
"TUBE" : "URINE_CONTAINER"
|
|
296
|
+
"TUBE" : "URINE_CONTAINER",
|
|
297
|
+
"REPORT_NAME" : "Urine Routine"
|
|
240
298
|
},
|
|
241
299
|
"CLA" : {
|
|
242
300
|
"LIS_CODE" : "CLA",
|
|
243
|
-
"TUBE" : "URINE_CONTAINER"
|
|
301
|
+
"TUBE" : "URINE_CONTAINER",
|
|
302
|
+
"REPORT_NAME" : "Urine Routine"
|
|
244
303
|
}
|
|
245
304
|
}
|
data/lib/ruby_astm/result.rb
CHANGED
|
@@ -1,5 +1,6 @@
|
|
|
1
1
|
class Result
|
|
2
2
|
attr_accessor :name
|
|
3
|
+
attr_accessor :report_name
|
|
3
4
|
attr_accessor :value
|
|
4
5
|
attr_accessor :units
|
|
5
6
|
attr_accessor :flags
|
|
@@ -11,6 +12,7 @@ class Result
|
|
|
11
12
|
if line = args[:line]
|
|
12
13
|
line.fields[2].scan(/\^+(?<name>[A-Za-z0-9\%\#\-\_\?\/]+)\^?(?<dilution>\d+)?/) { |name,dilution|
|
|
13
14
|
self.name = lookup_mapping(name)
|
|
15
|
+
self.report_name = lookup_report_name(name)
|
|
14
16
|
}
|
|
15
17
|
end
|
|
16
18
|
end
|
|
@@ -60,6 +62,8 @@ class Result
|
|
|
60
62
|
end
|
|
61
63
|
end
|
|
62
64
|
|
|
65
|
+
|
|
66
|
+
|
|
63
67
|
## here will call mappings and check the result correlation
|
|
64
68
|
def initialize(args)
|
|
65
69
|
set_name(args)
|
|
@@ -68,6 +72,7 @@ class Result
|
|
|
68
72
|
set_timestamp(args)
|
|
69
73
|
set_dilution(args)
|
|
70
74
|
set_units(args)
|
|
75
|
+
|
|
71
76
|
=begin
|
|
72
77
|
if args[:line]
|
|
73
78
|
line = args[:line]
|
|
@@ -101,4 +106,8 @@ class Result
|
|
|
101
106
|
$mappings[name] ? $mappings[name]["TRANSFORM"] : nil
|
|
102
107
|
end
|
|
103
108
|
|
|
109
|
+
def lookup_report_name(name)
|
|
110
|
+
$mappings[name] ? $mappings[name]["REPORT_NAME"] : name
|
|
111
|
+
end
|
|
112
|
+
|
|
104
113
|
end
|