ruby-netcdf 0.7.2 → 0.8.0

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data/.gitignore

@@ -2,6 +2,5 @@
 *~
 *.so
 Makefile
-ChangeLog
 /pkg/
 /tmp/

data/ChangeLog

@@ -0,0 +1,456 @@
+2022-03-21  Takeshi Horinouchi  (HEAD -> master)
+version number updated to 0.8.0
+
+M	lib/numru/netcdf/version.rb
+
+2022-03-21  Takeshi Horinouchi 
+LICENSE text updated
+
+M	LICENSE.txt
+
+2022-03-21  Takeshi Horinouchi 
+Merge remote-tracking branch 'origin/rewrite_test_use_unit-test'
+
+2022-03-21  Takeshi Horinouchi 
+Merge remote-tracking branch 'origin/Fix_Obsolete_rb_secure'
+
+2022-03-21  Takeshi Horinouchi 
+Revert "Fixnum -> Integer"
+
+This reverts commit 2c2fd995df1865e6f521679aeca746385203a42f.
+
+M	lib/numru/netcdf.rb
+
+2021-05-22  Takeshi Horinouchi  (origin/master, origin/HEAD)
+Fixnum -> Integer
+
+M	lib/numru/netcdf.rb
+
+2020-05-21  Youhei SASAKI  (origin/rewrite_test_use_unit-test)
+Rewrite test: use Test::Unit
+
+Rewrite test using Test::Unit
+
+Signed-off-by: Youhei SASAKI <uwabami@gfd-dennou.org>
+
+M	ruby-netcdf-bigmem.gemspec
+M	ruby-netcdf.gemspec
+M	test/aref_aset.rb
+M	test/char_var.rb
+M	test/clone.rb
+M	test/create_tmp.rb
+M	test/def_var_with_dim.rb
+M	test/factor_offset.rb
+M	test/putatt.rb
+M	test/test.rb
+M	test/type.rb
+
+2020-05-21  Youhei SASAKI  (origin/Fix_Obsolete_rb_secure, Fix_Obsolete_rb_secure)
+Drop obsolete rb_secure, rb_safe_level
+
+Ref.
+  - https://tmtms.hatenablog.com/entry/201912/ruby27-misc2
+  - https://bugs.ruby-lang.org/issues/15344
+
+Signed-off-by: Youhei SASAKI <uwabami@gfd-dennou.org>
+
+M	ext/numru/netcdfraw.c
+M	lib/numru/netcdf.rb
+
+2016-09-27  Takeshi Horinouchi  (tag: v0.7.2)
+Commented out the gemspec file for the bibmem version
+
+M	Rakefile
+
+2015-06-09  Takeshi Horinouchi 
+corrected the previous commit
+
+M	lib/numru/netcdf.rb
+
+2015-06-09  Takeshi Horinouchi 
+Increased the supprted argument value by NetCDF.creation_format (NC_FORMAT_*)
+
+M	lib/numru/netcdf.rb
+
+2015-06-09  Takeshi Horinouchi 
+Added a method NetCDF#format (for NetCDF-4) and related constants NC_FORMAT_CLASSIC etc
+
+M	ext/numru/netcdfraw.c
+
+2015-05-21  Takeshi Horinouchi 
+Deleted ".alpha" from VERSION (since gem did not solve the dependency when I tried to install gphys)
+
+M	lib/numru/netcdf/version.rb
+
+2015-05-21  Takeshi Horinouchi 
+Created a gemspec to depend on narray-bigmem
+
+M	Rakefile
+M	ext/numru/extconf.rb
+A	ruby-netcdf-bigmem.gemspec
+
+2015-04-02  Takeshi Horinouchi  (origin/rubygems, rubygems)
+changed to require 'numru/netcdf/version'
+
+M	Rakefile
+M	ruby-netcdf.gemspec
+
+2015-04-02  Takeshi Horinouchi 
+changed to require 'numru/netcdf/version'
+
+M	lib/numru/netcdf.rb
+
+2015-04-02  Takeshi Horinouchi 
+Created the version.rb file
+
+A	lib/numru/netcdf/version.rb
+
+2015-03-30  Eriko Nishimoto 
+Modified test.rb
+
+Corrected require libraries
+
+M	test/test.rb
+
+2015-03-30  Eriko Nishimoto 
+Corrected require_paths
+
+M	ruby-netcdf.gemspec
+
+2015-03-30  Eriko Nishimoto 
+Modified git ignore list
+
+Added "tmp" and "pkg" folders to the list
+
+M	.gitignore
+
+2015-03-30  Eriko Nishimoto 
+Corrected typo
+
+M	Rakefile
+M	ruby-netcdf.gemspec
+
+2015-03-30  Eriko Nishimoto 
+Added VERSION number
+
+M	lib/numru/netcdf.rb
+
+2015-03-30  Eriko Nishimoto 
+Changed folder structure under lib
+
+R100	lib/netcdf.rb	lib/numru/netcdf.rb
+R100	lib/netcdf_miss.rb	lib/numru/netcdf_miss.rb
+
+2015-03-30  Eriko Nishimoto 
+Moved extentional files to ext/numru
+
+R100	extconf.rb	ext/numru/extconf.rb
+R100	netcdfraw.c	ext/numru/netcdfraw.c
+
+2015-03-30  Eriko Nishimoto 
+Added setting files for rubygems
+
+A	Gemfile
+A	Rakefile
+A	ruby-netcdf.gemspec
+
+2015-03-30  Takeshi Horinouchi 
+Renamed the current ChangeLog to back up.
+
+R100	ChangeLog	.ChangeLog.until20150117
+
+2015-03-30  Takeshi Horinouchi 
+Registered files (patterns) to ignore in the repository
+
+A	.gitignore
+
+2015-01-27  Takeshi Horinouchi  (tag: ruby-netcdf-0_7_1)
+Updated. ruby-netcdf-0.7.1 to be released.
+
+M	ChangeLog
+
+2015-01-27  Takeshi Horinouchi 
+	* doc/ updated
+
+M	doc/Ref_man.html
+M	doc/Ref_man.rd
+M	doc/Ref_man_jp.html
+M	doc/Ref_man_jp.rd
+M	doc/to_html
+
+2015-01-27  Takeshi Horinouchi 
+	* demo/demo5-netcdf4.rb: created
+
+A	demo/demo5-netcdf4.rb
+
+2015-01-27  Takeshi Horinouchi 
+Tue Jan 27  2015  T Horinouchi
+	* netcdfraw.c:
+	  * added new NetCDF-4 methods:
+	    * NetCDFVar::deflate : to set compression
+	    * NetCDFVar::deflate_params : returns current values of
+	      compression parameters
+	    * NetCDFVar::endian= : set (change) the endian
+	    * NetCDFVar::endian : returns the current endian setting
+	   * added new constants: NC_ENDIAN_NATIVE (=0),
+	     NC_ENDIAN_LITTLE (=1), NC_ENDIAN_BIG (=2)
+	   * updated the safe-level condition, which was missed in the
+	     change on Jan 22.
+
+M	netcdfraw.c
+
+2015-01-23  Takeshi Horinouchi 
+corrected the charset setting
+
+M	doc/Ref_man_jp.html
+
+2015-01-23  Takeshi Horinouchi 
+further updated (a little)
+
+M	doc/Ref_man.html
+M	doc/Ref_man.rd
+M	doc/Ref_man_jp.html
+M	doc/Ref_man_jp.rd
+
+2015-01-23  Takeshi Horinouchi 
+Updated the reference manuals
+
+M	doc/Ref_man.html
+M	doc/Ref_man.rd
+M	doc/Ref_man_jp.html
+M	doc/Ref_man_jp.rd
+M	doc/to_html
+
+2015-01-22  Takeshi Horinouchi  (tag: ruby-netcdf-0_7_0)
+ChangeLog updated to release ruby-netcdf-0.7.0 (relase tag: ruby-netcdf-0_7_0)
+
+M	ChangeLog
+
+2015-01-22  Takeshi Horinouchi 
+extconf.rb: supported to configure gem-installed narray.
+(also reverted the previous commit.)
+
+M	extconf.rb
+
+2015-01-22  Takeshi Horinouchi 
+	* extconf.rb: deleted a reference to "/usr/local"
+
+M	ChangeLog
+M	extconf.rb
+
+2015-01-22  Takeshi Horinouchi 
+	* lib/netcdf.rb: revised along the patch [dennou-ruby:003705].
+
+M	lib/netcdf.rb
+
+2015-01-22  Takeshi Horinouchi 
+Deleted an unused variable (nc_tlen) in many methods
+
+M	netcdfraw.c
+
+2015-01-22  Takeshi Horinouchi 
+	* netcdfraw.c: further type update to na_shape_t (not covered
+	  by the patch)
+
+M	netcdfraw.c
+
+2015-01-22  Takeshi Horinouchi 
+Thu Jan 22  2015  T Horinouchi
+	* netcdfraw.c: changed rb_secure(4) to rb_secure(3), since security
+	  level 4 is abolished in ruby 2.
+
+M	netcdfraw.c
+
+2015-01-22  Takeshi Horinouchi 
+Thu Jan 22  2015  T Horinouchi
+	* netcdfraw.c: revised based on the patch posted by seiya with
+	  [dennou-ruby:003705] but adopted the typedef in the latest
+	  narray-bigmem (namely, used na_shape_t).
+
+M	netcdfraw.c
+
+2014-09-08  Takeshi Horinouchi 
+Mon Sep  8  2014  T Horinouchi
+	* lib/netcdf.rb: Tentative treatment of the very slow netcdf-4's
+	  strided reading.
+
+M	ChangeLog
+M	lib/netcdf.rb
+
+2014-09-06  Takeshi Horinouchi 
+
+minor update
+
+M	extconf.rb
+
+2014-09-06  Takeshi Horinouchi 
+	* lib/netcdf.rb: Refactoring of NetCDF#simple_get.
+
+M	ChangeLog
+M	lib/netcdf.rb
+
+2014-09-06  Takeshi Horinouchi 
+Sat Sep  6  2014  T Horinouchi
+	* netcdfraw.c: Added constants such as NC_NETCDF4;
+	  This enables one to individually specify the creation format by
+	  using the low level interface NetCDF.nc_create
+	* lib/netcdf.rb: Supported the "default" file creation format
+	  by adding NetCDF.creation_format= and NetCDF.creation_format
+
+M	ChangeLog
+M	lib/netcdf.rb
+M	netcdfraw.c
+
+2014-09-06  Takeshi Horinouchi 
+Sat Sep  6  2014  T Horinouchi
+	* extconf.rb
+	  * introduced the macro NCVER
+	  * changed to give a higer priority to NetCDF 4;
+	  * added $vendorarchdir to dir_config
+	* netcdfraw.c: Added the class method NetCDF.libvers (<- nc_inq_libvers)
+	* lib/netcdf.rb: Added the class constant NCVERSION (<- NetCDF.libvers)
+
+M	ChangeLog
+M	extconf.rb
+M	lib/netcdf.rb
+M	netcdfraw.c
+
+2014-08-25  Takeshi Horinouchi 
+Mon Aug 25  2014  T Horinouchi
+	* netcdfraw.c: to avoid a compile error when -Werror=format-security
+
+M	ChangeLog
+M	netcdfraw.c
+
+2012-02-19  Takeshi Horinouchi  (tag: ruby-netcdf-0_6_6)
+Sun Feb 19  2011  T Horinouchi
+	* ruby-netcdf-0.6.6 released (relase tag: ruby-netcdf-0_6_6)
+
+M	ChangeLog
+
+2012-02-19  Takeshi Horinouchi 
+Sun Feb 19  2011  T Horinouchi
+	* lib/netcdf.rb: method pack: debug of enbug made
+	  when 1.1 -> 1.2 (cvs tag) commited in Jan 2010.
+	* netcdfraw.c: Added macro NC_RAISE2. Enhanced error
+	  messaging in NetCDF_open and NetCDF_create to show file name.
+
+M	ChangeLog
+M	lib/netcdf.rb
+M	netcdfraw.c
+
+2011-02-17  Takeshi Horinouchi  (tag: ruby-netcdf-0_6_5)
+Thu Feb 17  2011  T Horinouchi
+	* ruby-netcdf-0.6.5 released (relase tag: ruby-netcdf-0_6_5)
+
+M	ChangeLog
+
+2011-02-17  Takeshi Horinouchi 
+Thu Feb 17  2011  T Horinouchi
+	* extconf.rb: Debug to have the --disable-opendap option really work
+
+M	ChangeLog
+M	extconf.rb
+
+2011-02-12  Takeshi Horinouchi 
+	* ruby-netcdf-0.6.5 preview release.
+
+M	ChangeLog
+
+2010-12-22  Tsuyoshi Koshiro 
+Thu Dec 23  2010  T Koshiro
+        * test/aref_aset.rb : updated for Ruby 1.9.2
+        * lib/netcdf.rb: NetCDF.clean_tmpfile : lambda -> proc
+        * verified that all test programs work fine with Ruby 1.9.2.
+
+M	ChangeLog
+M	lib/netcdf.rb
+M	test/aref_aset.rb
+
+2010-12-14  Tsuyoshi Koshiro 
+Tue Dec 14  2010  T Koshiro
+        * netcdfraw.c : nctype2natype : char* -> const char*
+        * test/aref_aset.rb, test/factor_offset.rb : bug fix.
+
+M	ChangeLog
+M	netcdfraw.c
+M	test/aref_aset.rb
+M	test/factor_offset.rb
+
+2010-12-13  Tsuyoshi Koshiro 
+Mon Dec 13  2010  T Koshiro
+        * netcdfraw.c : patch for Ruby 1.9.2
+          - by S Kouketsu (dennou-ruby:003191)
+          - by T Koshiro  (dennou-ruby:003226)
+
+M	ChangeLog
+M	netcdfraw.c
+
+2010-03-15  Takeshi Horinouchi  (tag: ruby-netcdf-0_6_4)
+Mon Mar 15  2010  T Horinouchi
+	* ruby-netcdf-0.6.4 released (relase tag: ruby-netcdf-0_6_4)
+
+M	ChangeLog
+
+2010-01-14  Takeshi Horinouchi 
+Thu Jan 14  2010  T Horinouchi < T Koshiro
+	* netcdfraw.c : patch for Ruby 1.9.1 (dennou-ruby:003138)
+	* extconf.rb : patch for NetCDF-4.1-beta2 (dcdvlop Nov 20, 2009)
+
+M	ChangeLog
+M	extconf.rb
+M	netcdfraw.c
+
+2010-01-14  Takeshi Horinouchi 
+Fri Aug 15  2008  T Horinouchi
+	* lib/netcdf_miss.rb: in __interpret_missing_params,
+	  changed just to warn, not to raise an exception,
+	  if the missing value or fill value is within the
+	  valid range (warning can be suppressed by $VERBOSE = nil)
+Thu Jul 17  2008  T Horinouchi
+	* lib/netcdf.rb: NetCDFVar's private method pack : to take
+	  round if the type of self is integer.
+	* lib/netcdf_miss.rb: debug in the handling of missing data
+	  specification using the external data type.
+Wed Jul 16  2008  T Horinouchi < M Otsuka
+	* netcdfraw.c : patch for Ruby 1.9
+
+M	ChangeLog
+M	lib/netcdf.rb
+M	lib/netcdf_miss.rb
+M	netcdfraw.c
+
+2010-01-14  Takeshi Horinouchi 
+Initial revision
+
+A	ChangeLog
+A	INSTALL
+A	LICENSE.txt
+A	ToDo
+A	demo/README
+A	demo/demo1-create-alt.rb
+A	demo/demo1-create.rb
+A	demo/demo2-graphic.rb
+A	demo/demo3-ncepclim.rb
+A	demo/demo4-copy.rb
+A	doc/README_JP.txt
+A	doc/Ref_man.html
+A	doc/Ref_man.rd
+A	doc/Ref_man_jp.html
+A	doc/Ref_man_jp.rd
+A	doc/to_html
+A	extconf.rb
+A	lib/netcdf.rb
+A	lib/netcdf_miss.rb
+A	netcdfraw.c
+A	test/aref_aset.rb
+A	test/char_var.rb
+A	test/clone.rb
+A	test/create_tmp.rb
+A	test/def_var_with_dim.rb
+A	test/factor_offset.rb
+A	test/putatt.cdl
+A	test/putatt.rb
+A	test/test.cdl
+A	test/test.rb
+A	test/type.rb

data/LICENSE.txt

@@ -1,59 +1,34 @@
-Ruby/NetCDF is copyrighted free software by Takeshi Horinouchi and the 
+Ruby/NetCDF is copyrighted free software by Takeshi Horinouchi and 
 GFD Dennou Club.
-You can redistribute it and/or modify it under either the terms of the
-GPL, or the conditions below, which is idential to Ruby's license
-(http://www.ruby-lang.org/en/LICENSE.txt):
 
-  1. You may make and give away verbatim copies of the source form of the
-     software without restriction, provided that you duplicate all of the
-     original copyright notices and associated disclaimers.
-
-  2. You may modify your copy of the software in any way, provided that
-     you do at least ONE of the following:
-
-       a) place your modifications in the Public Domain or otherwise
-          make them Freely Available, such as by posting said
-	  modifications to Usenet or an equivalent medium, or by allowing
-	  the author to include your modifications in the software.
-
-       b) use the modified software only within your corporation or
-          organization.
-
-       c) rename any non-standard executables so the names do not conflict
-	  with standard executables, which must also be provided.
-
-       d) make other distribution arrangements with the author.
-
-  3. You may distribute the software in object code or executable
-     form, provided that you do at least ONE of the following:
-
-       a) distribute the executables and library files of the software,
-	  together with instructions (in the manual page or equivalent)
-	  on where to get the original distribution.
-
-       b) accompany the distribution with the machine-readable source of
-	  the software.
-
-       c) give non-standard executables non-standard names, with
-          instructions on where to get the original software distribution.
-
-       d) make other distribution arrangements with the author.
-
-  4. You may modify and include the part of the software into any other
-     software (possibly commercial).  But some files in the distribution
-     are not written by the author, so that they are not under this terms.
-
-     They are gc.c(partly), utils.c(partly), regex.[ch], st.[ch] and some
-     files under the ./missing directory.  See each file for the copying
-     condition.
-
-  5. The scripts and library files supplied as input to or produced as 
-     output from the software do not automatically fall under the
-     copyright of the software, but belong to whomever generated them, 
-     and may be sold commercially, and may be aggregated with this
-     software.
-
-  6. THIS SOFTWARE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR
-     IMPLIED WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED
-     WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
-     PURPOSE.
+Copyright 2003-2022 (C) GFD Dennou Club
+(http://www.gfd-dennou.org/) All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are
+met:
+
+   1. Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+
+   2. Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in
+      the documentation and/or other materials provided with the
+      distribution.
+
+THIS SOFTWARE IS PROVIDED BY GFD DENNOU CLUB AND CONTRIBUTORS ``AS IS'' 
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, 
+THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GFD DENNOU CLUB OR
+CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
+PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
+LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+The views and conclusions contained in the software and documentation
+are those of the authors and should not be interpreted as representing
+official policies, either expressed or implied, of Takeshi Horinouchi
+and GFD Dennou Club.