ruby-netcdf 0.7.1 → 0.8.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +5 -13
- data/.ChangeLog.until20150117 +447 -0
- data/.gitignore +4 -6
- data/ChangeLog +392 -383
- data/LICENSE.txt +32 -57
- data/Rakefile +36 -1
- data/{extconf.rb → ext/numru/extconf.rb} +2 -2
- data/{netcdfraw.c → ext/numru/netcdfraw.c} +318 -320
- data/lib/numru/netcdf/version.rb +7 -0
- data/lib/numru/netcdf.rb +806 -0
- data/lib/{netcdf_miss.rb → numru/netcdf_miss.rb} +0 -0
- data/ruby-netcdf-bigmem.gemspec +29 -0
- data/ruby-netcdf.gemspec +8 -13
- data/test/aref_aset.rb +63 -33
- data/test/char_var.rb +32 -21
- data/test/clone.rb +46 -51
- data/test/create_tmp.rb +17 -13
- data/test/def_var_with_dim.rb +29 -11
- data/test/factor_offset.rb +77 -46
- data/test/putatt.rb +71 -49
- data/test/test.rb +197 -190
- data/test/type.rb +27 -11
- metadata +37 -24
- data/.rspec +0 -2
- data/.travis.yml +0 -3
- data/bin/console +0 -14
- data/bin/setup +0 -7
- data/lib/netcdf.rb +0 -808
- data/lib/version.rb +0 -5
data/test/test.rb
CHANGED
@@ -1,192 +1,199 @@
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require 'narray'
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require '../netcdfraw'
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require '../lib/netcdf'
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## <-- to test before make install //
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require 'test/unit'
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require 'numru/netcdf'
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include NumRu
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file.
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file.put_att("
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file.put_att("
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file.put_att("
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file.
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byte_vara.put(
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byte_vara.put(
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byte_vara.put(
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byte_vara.put(h,{"start"=>[
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byte_vara.put(h,{
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byte_vara.put(
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sint_vara.put(
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sint_vara.put(
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sint_vara.put(
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sint_vara.put(l,{"start"=>[
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sint_vara.put(l,{"start"=>[
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sint_vara.put(
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int_vara.put(
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int_vara.put(
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int_vara.put(
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int_vara.put(n,{"start"=>[
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int_vara.put(n,{"start"=>[
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int_vara.put(
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sfloat_vara.put(
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sfloat_vara.put(
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sfloat_vara.put(
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sfloat_vara.put(p,{"start"=>[
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sfloat_vara.put(p,{"start"=>[
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sfloat_vara.put(
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float_vara.put(
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float_vara.put(
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float_vara.put(
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float_vara.put(r,{"start"=>[
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float_vara.put(r,{"start"=>[
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float_vara.put(
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copy_byte.
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copy_byte.
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copy_sint.
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copy_int.
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copy_sfloat.
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copy_float.
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file.fill(
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float_vara.
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# What checked?
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class TestCreate < Test::Unit::TestCase
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def test_create_netcdf_file
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@filename = "test.nc"
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file=NetCDF.create(@filename,false,false)
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assert dimx=file.def_dim("x",15)
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assert dimy=file.def_dim("y",10)
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assert dimz=file.def_dim("z",10)
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batt = file.put_att("type_byte",5,"byte")
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file.put_att("type_short",[222,333,444],"sint")
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file.put_att("type_int",[2222,3333,4444])
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file.put_att("type_float",[2.22,3.33,4.44],"sfloat")
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file.put_att("type_double",[2.222,3.333,4.444])
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string = file.put_attraw("string","netCDF for Ruby","string")
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batt.put(6,"byte")
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assert sint_var=file.def_var("test_sint","sint",["x"])
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assert byte_var=file.def_var("test_byte","byte",["y"])
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assert byte_var2=file.def_var("test_byte2","byte",[dimy,dimz])
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assert int_var=file.def_var("test_int","int",["y"])
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assert sfloat_var=file.def_var("test_sfloat","sfloat",["z"])
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assert float_var=file.def_var("test_float","float",["y"])
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assert a=NArray.sint(10).indgen
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assert b=NArray.sint(10).fill(7)
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assert c=NArray.byte(10).indgen
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assert d=NArray.int(10).indgen
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assert e=NArray.sfloat(10).fill(1.111)
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assert f=NArray.float(10).fill(5.5555555)
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file.enddef
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file2 = file
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assert_equal file2, file
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assert_nil byte_var.put_var_byte(c)
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assert_nil int_var.put_var_int(d)
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assert_nil sfloat_var.put_var_sfloat(e)
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assert_nil float_var.put_var_float(f)
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file.redef
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byte_vara=file.def_var("test_byte_vara","byte",[dimy,dimz]);
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sint_vara=file.def_var("test_sint_vara","sint",["y","z"]);
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int_vara=file.def_var("test_int_vara","int",["y","z"]);
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sfloat_vara=file.def_var("test_sfloat_vara","sfloat",["y","z"]);
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float_vara=file.def_var("test_float_vara","float",["y","z"]);
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file.enddef
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byte_vara2 = byte_vara
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assert_equal byte_vara2, byte_vara
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assert g=NArray.byte(10,10).indgen
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assert h=NArray.byte(2,3).indgen
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assert gh=NArray.byte(1,1).fill(33)
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assert k=NArray.sint(10,10).indgen
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assert l=NArray.sint(2,3).indgen
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assert kl=NArray.sint(1,1).fill(44)
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assert m=NArray.int(10,10).indgen
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assert n=NArray.int(2,3).indgen
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assert mn=NArray.int(1,1).fill(55)
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assert o=NArray.sfloat(10,10).fill(1.234567)
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assert p=NArray.sfloat(2,3).fill(2.345678)
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assert op=NArray.int(1,1).fill(3.4)
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assert q=NArray.float(10,10).fill(1.234)
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assert r=NArray.float(2,3).fill(2.345)
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assert qr=NArray.float(1,1).fill(4.5)
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assert s=NArray.float(2,2).fill(10.0)
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assert_nil byte_vara.put(g)
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assert_nil byte_vara.put(h,{"start"=>[3,5]})
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assert_nil byte_vara.put(g,{"start"=>[0,0],"end"=>[9,9]})
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assert_nil byte_vara.put(h,{"start"=>[-8,2]})
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assert_nil byte_vara.put(h,{"start"=>[0,0],"stride"=>[2,3]})
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assert_nil byte_vara.put(h,{'start'=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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assert_nil byte_vara.put(gh,{"index"=>[4,7]})
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sint_vara.put(k)
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sint_vara.put(l,{"start"=>[3,5]})
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sint_vara.put(k,{"start"=>[0,0],"end"=>[9,9]})
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sint_vara.put(l,{"start"=>[-8,2]})
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sint_vara.put(l,{"start"=>[0,0],"stride"=>[2,3]})
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sint_vara.put(l,{"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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sint_vara.put(kl,{"index"=>[4,7]})
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int_vara.put(m)
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int_vara.put(n,{"start"=>[3,5]})
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int_vara.put(m,{"start"=>[0,0],"end"=>[9,9]})
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int_vara.put(n,{"start"=>[-8,2]})
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int_vara.put(n,{"start"=>[0,0],"stride"=>[2,3]})
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int_vara.put(n,{"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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int_vara.put(mn,{"index"=>[4,7]})
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sfloat_vara.put(o)
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sfloat_vara.put(p,{"start"=>[3,5]})
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sfloat_vara.put(o,{"start"=>[0,0],"end"=>[9,9]})
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sfloat_vara.put(p,{"start"=>[-8,2]})
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sfloat_vara.put(p,{"start"=>[0,0],"stride"=>[2,3]})
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sfloat_vara.put(p,{"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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sfloat_vara.put(op,{"index"=>[4,7]})
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float_vara.put(q)
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float_vara.put(r,{"start"=>[3,5]})
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float_vara.put(q,{"start"=>[0,0],"end"=>[9,9]})
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float_vara.put(r,{"start"=>[-8,2]})
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float_vara.put(r,{"start"=>[0,0],"stride"=>[2,3]})
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float_vara.put(r,{"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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float_vara.put(qr,{"index"=>[4,7]})
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float_vara.dim_names
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assert na_aaa=byte_vara.get({"start"=>[3,5]})
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assert na_aab=byte_vara.get({"start"=>[0,0],"end"=>[9,9]})
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assert na_aac=byte_vara.get({"start"=>[-8,2]})
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assert na_aad=byte_vara.get({"start"=>[0,0],"stride"=>[2,3]})
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assert na_aae=byte_vara.get({'start'=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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assert na_aaf=byte_vara.get({"index"=>[4,7]})
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assert na_aag=byte_vara.get
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assert na_bba=sint_vara.get({"start"=>[3,5]})
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assert na_bbb=sint_vara.get({"start"=>[0,0],"end"=>[9,9]})
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assert na_bbc=sint_vara.get({"start"=>[-8,2]})
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assert na_bbd=sint_vara.get({"start"=>[0,0],"stride"=>[2,3]})
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assert na_bbf=sint_vara.get({"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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assert na_bbg=sint_vara.get({"index"=>[4,7]})
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assert na_bbh=sint_vara.get
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assert na_cca=int_vara.get({"start"=>[3,5]})
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assert na_ccb=int_vara.get({"start"=>[0,0],"end"=>[9,9]})
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assert na_ccc=int_vara.get({"start"=>[-8,2]})
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assert na_ccd=int_vara.get({"start"=>[0,0],"stride"=>[2,3]})
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assert na_cce=int_vara.get({"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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assert na_ccf=int_vara.get({"index"=>[4,7]})
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assert na_ccg=int_vara.get
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assert na_dda=sfloat_vara.get({"start"=>[3,5]})
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assert na_ddb=sfloat_vara.get({"start"=>[0,0],"end"=>[9,9]})
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assert na_ddc=sfloat_vara.get({"start"=>[-8,2]})
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assert na_ddd=sfloat_vara.get({"start"=>[0,0],"stride"=>[2,3]})
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assert na_dde=sfloat_vara.get({"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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assert na_ddf=sfloat_vara.get({"index"=>[4,7]})
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assert na_ddg=sfloat_vara.get
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assert na_eea=float_vara.get({"start"=>[3,5]})
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assert na_eeb=float_vara.get({"start"=>[0,0],"end"=>[9,9]})
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assert na_eec=float_vara.get({"start"=>[-8,2]})
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assert na_eed=float_vara.get({"start"=>[0,0],"stride"=>[2,3]})
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assert na_eee=float_vara.get({"start"=>[1,1],"end"=>[3,7],"stride"=>[2,3]})
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assert na_eef=float_vara.get({"index"=>[4,7]})
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assert na_eeg=float_vara.get
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|
+
|
155
|
+
file.redef
|
156
|
+
|
157
|
+
copy_byte = string.copy(byte_vara)
|
158
|
+
copy_byte.put([0,20],"byte")
|
159
|
+
copy_byte.name="new_name"
|
160
|
+
|
161
|
+
copy_byte2 = copy_byte
|
162
|
+
assert_equal copy_byte2, copy_byte
|
163
|
+
|
164
|
+
copy_sint = string.copy(sint_vara)
|
165
|
+
copy_sint.put("%%%%%")
|
166
|
+
copy_int = string.copy(int_vara)
|
167
|
+
copy_int.put([0,60],"int")
|
168
|
+
copy_sfloat = string.copy(sfloat_vara)
|
169
|
+
copy_sfloat.put([0.01,5.5],"sfloat")
|
170
|
+
copy_float = string.copy(float_vara)
|
171
|
+
copy_float.put([0.0001,5.5555],"float")
|
172
|
+
file.enddef
|
173
|
+
assert nm = copy_byte.name
|
174
|
+
assert att0 = string.get
|
175
|
+
assert att1 = copy_byte.get
|
176
|
+
assert att2 = copy_sint.get
|
177
|
+
assert att3 = copy_int.get
|
178
|
+
assert att4 = copy_sfloat.get
|
179
|
+
assert att5 = copy_float.get
|
180
|
+
file.fill(true)
|
181
|
+
file.fill(false)
|
182
|
+
|
183
|
+
float_vara.dim_names
|
184
|
+
float_vara.att_names
|
185
|
+
|
186
|
+
file.close
|
187
|
+
end
|
188
|
+
|
189
|
+
def teardown
|
190
|
+
if File.exist?(@filename)
|
191
|
+
begin
|
192
|
+
File.delete(@filename)
|
193
|
+
rescue
|
194
|
+
p $!
|
195
|
+
end
|
196
|
+
end
|
197
|
+
end
|
198
|
+
|
199
|
+
end
|
data/test/type.rb
CHANGED
@@ -1,13 +1,29 @@
|
|
1
|
+
require 'test/unit'
|
1
2
|
require 'numru/netcdf'
|
2
3
|
include NumRu
|
3
|
-
|
4
|
-
|
5
|
-
|
6
|
-
|
7
|
-
|
8
|
-
v = f.def_var('
|
9
|
-
|
10
|
-
v
|
11
|
-
|
12
|
-
|
13
|
-
|
4
|
+
class TestType < Test::Unit::TestCase
|
5
|
+
def test_type
|
6
|
+
@s = 'tmp.nc'
|
7
|
+
f = NetCDF.create(@s)
|
8
|
+
d = f.def_dim('x',2)
|
9
|
+
v = f.def_var('x','sfloat',[d])
|
10
|
+
assert_equal v.vartype,
|
11
|
+
v.ntype
|
12
|
+
v = f.def_var('x1','sint',[d])
|
13
|
+
assert_equal v.vartype,
|
14
|
+
v.ntype
|
15
|
+
v = f.def_var('x2','byte',[d])
|
16
|
+
assert_equal v.vartype,
|
17
|
+
v.ntype
|
18
|
+
f.close
|
19
|
+
end
|
20
|
+
def teardown
|
21
|
+
if File.exist?(@s)
|
22
|
+
begin
|
23
|
+
File.delete(@s)
|
24
|
+
rescue
|
25
|
+
p $!
|
26
|
+
end
|
27
|
+
end
|
28
|
+
end
|
29
|
+
end
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: ruby-netcdf
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.
|
4
|
+
version: 0.8.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Takeshi Horinouchi
|
@@ -12,56 +12,68 @@ authors:
|
|
12
12
|
autorequire:
|
13
13
|
bindir: bin
|
14
14
|
cert_chain: []
|
15
|
-
date:
|
15
|
+
date: 2022-03-21 00:00:00.000000000 Z
|
16
16
|
dependencies:
|
17
17
|
- !ruby/object:Gem::Dependency
|
18
18
|
name: narray
|
19
19
|
requirement: !ruby/object:Gem::Requirement
|
20
20
|
requirements:
|
21
|
-
- -
|
21
|
+
- - ">="
|
22
22
|
- !ruby/object:Gem::Version
|
23
23
|
version: '0'
|
24
24
|
type: :runtime
|
25
25
|
prerelease: false
|
26
26
|
version_requirements: !ruby/object:Gem::Requirement
|
27
27
|
requirements:
|
28
|
-
- -
|
28
|
+
- - ">="
|
29
29
|
- !ruby/object:Gem::Version
|
30
30
|
version: '0'
|
31
31
|
- !ruby/object:Gem::Dependency
|
32
32
|
name: narray_miss
|
33
33
|
requirement: !ruby/object:Gem::Requirement
|
34
34
|
requirements:
|
35
|
-
- -
|
35
|
+
- - ">="
|
36
36
|
- !ruby/object:Gem::Version
|
37
37
|
version: '0'
|
38
38
|
type: :runtime
|
39
39
|
prerelease: false
|
40
40
|
version_requirements: !ruby/object:Gem::Requirement
|
41
41
|
requirements:
|
42
|
-
- -
|
42
|
+
- - ">="
|
43
|
+
- !ruby/object:Gem::Version
|
44
|
+
version: '0'
|
45
|
+
- !ruby/object:Gem::Dependency
|
46
|
+
name: test-unit
|
47
|
+
requirement: !ruby/object:Gem::Requirement
|
48
|
+
requirements:
|
49
|
+
- - ">="
|
50
|
+
- !ruby/object:Gem::Version
|
51
|
+
version: '0'
|
52
|
+
type: :development
|
53
|
+
prerelease: false
|
54
|
+
version_requirements: !ruby/object:Gem::Requirement
|
55
|
+
requirements:
|
56
|
+
- - ">="
|
43
57
|
- !ruby/object:Gem::Version
|
44
58
|
version: '0'
|
45
59
|
description: RubyNetCDF is the Ruby interface to the NetCDF library built on the NArray
|
46
|
-
library, which is an efficient multi-dimensional numeric array class for Ruby.
|
60
|
+
library, which is an efficient multi-dimensional numeric array class for Ruby. This
|
61
|
+
version works with Ruby2.0.
|
47
62
|
email:
|
48
63
|
- eriko@gfd-dennou.org
|
49
64
|
executables: []
|
50
65
|
extensions:
|
51
|
-
- extconf.rb
|
66
|
+
- ext/numru/extconf.rb
|
52
67
|
extra_rdoc_files: []
|
53
68
|
files:
|
54
|
-
- .
|
55
|
-
- .
|
56
|
-
- .travis.yml
|
69
|
+
- ".ChangeLog.until20150117"
|
70
|
+
- ".gitignore"
|
57
71
|
- ChangeLog
|
58
72
|
- Gemfile
|
59
73
|
- INSTALL
|
60
74
|
- LICENSE.txt
|
61
75
|
- Rakefile
|
62
76
|
- ToDo
|
63
|
-
- bin/console
|
64
|
-
- bin/setup
|
65
77
|
- demo/README
|
66
78
|
- demo/demo1-create-alt.rb
|
67
79
|
- demo/demo1-create.rb
|
@@ -75,11 +87,12 @@ files:
|
|
75
87
|
- doc/Ref_man_jp.html
|
76
88
|
- doc/Ref_man_jp.rd
|
77
89
|
- doc/to_html
|
78
|
-
- extconf.rb
|
79
|
-
-
|
80
|
-
- lib/
|
81
|
-
- lib/version.rb
|
82
|
-
-
|
90
|
+
- ext/numru/extconf.rb
|
91
|
+
- ext/numru/netcdfraw.c
|
92
|
+
- lib/numru/netcdf.rb
|
93
|
+
- lib/numru/netcdf/version.rb
|
94
|
+
- lib/numru/netcdf_miss.rb
|
95
|
+
- ruby-netcdf-bigmem.gemspec
|
83
96
|
- ruby-netcdf.gemspec
|
84
97
|
- test/aref_aset.rb
|
85
98
|
- test/char_var.rb
|
@@ -94,25 +107,25 @@ files:
|
|
94
107
|
- test/type.rb
|
95
108
|
homepage: http://www.gfd-dennou.org/arch/ruby/products/ruby-netcdf/
|
96
109
|
licenses:
|
97
|
-
-
|
110
|
+
- BSD-2-Clause
|
98
111
|
metadata: {}
|
99
112
|
post_install_message:
|
100
113
|
rdoc_options: []
|
101
114
|
require_paths:
|
115
|
+
- ext
|
102
116
|
- lib
|
103
117
|
required_ruby_version: !ruby/object:Gem::Requirement
|
104
118
|
requirements:
|
105
|
-
- -
|
119
|
+
- - ">="
|
106
120
|
- !ruby/object:Gem::Version
|
107
|
-
version: '1.
|
121
|
+
version: '1.8'
|
108
122
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
109
123
|
requirements:
|
110
|
-
- -
|
124
|
+
- - ">="
|
111
125
|
- !ruby/object:Gem::Version
|
112
126
|
version: '0'
|
113
127
|
requirements: []
|
114
|
-
|
115
|
-
rubygems_version: 2.4.6
|
128
|
+
rubygems_version: 3.2.5
|
116
129
|
signing_key:
|
117
130
|
specification_version: 4
|
118
131
|
summary: Ruby interface to NetCDF
|
data/.rspec
DELETED
data/.travis.yml
DELETED
data/bin/console
DELETED
@@ -1,14 +0,0 @@
|
|
1
|
-
#!/usr/bin/env ruby
|
2
|
-
|
3
|
-
require "bundler/setup"
|
4
|
-
require "ruby/netcdf"
|
5
|
-
|
6
|
-
# You can add fixtures and/or initialization code here to make experimenting
|
7
|
-
# with your gem easier. You can also use a different console, if you like.
|
8
|
-
|
9
|
-
# (If you use this, don't forget to add pry to your Gemfile!)
|
10
|
-
# require "pry"
|
11
|
-
# Pry.start
|
12
|
-
|
13
|
-
require "irb"
|
14
|
-
IRB.start
|