ruby-netcdf 0.6.5
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- data/ChangeLog +389 -0
- data/INSTALL +62 -0
- data/LICENSE.txt +59 -0
- data/Rakefile +40 -0
- data/ToDo +1 -0
- data/demo/README +14 -0
- data/demo/demo1-create-alt.rb +35 -0
- data/demo/demo1-create.rb +35 -0
- data/demo/demo2-graphic.rb +67 -0
- data/demo/demo3-ncepclim.rb +178 -0
- data/demo/demo4-copy.rb +32 -0
- data/doc/README_JP.txt +152 -0
- data/doc/Ref_man.html +1482 -0
- data/doc/Ref_man.rd +1312 -0
- data/doc/Ref_man_jp.html +1445 -0
- data/doc/Ref_man_jp.rd +1276 -0
- data/doc/to_html +7 -0
- data/extconf.rb +137 -0
- data/extconf.rb.orig +124 -0
- data/extconf.rb.rej +16 -0
- data/lib/netcdf.rb +791 -0
- data/lib/netcdf_miss.rb +203 -0
- data/netcdfraw.c +4613 -0
- data/test/aref_aset.rb +37 -0
- data/test/char_var.rb +25 -0
- data/test/clone.rb +54 -0
- data/test/create_tmp.rb +15 -0
- data/test/def_var_with_dim.rb +14 -0
- data/test/factor_offset.rb +53 -0
- data/test/putatt.cdl +23 -0
- data/test/putatt.rb +56 -0
- data/test/test.cdl +31 -0
- data/test/test.rb +192 -0
- data/test/type.rb +13 -0
- metadata +140 -0
data/lib/netcdf_miss.rb
ADDED
@@ -0,0 +1,203 @@
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1
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+
require "numru/netcdf"
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2
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require "narray_miss"
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3
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module NumRu
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6
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class NetCDFVar
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8
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def get_with_miss(*args)
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__interpret_missing_params if !defined?(@missval)
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10
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data = simple_get(*args)
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11
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if @vmin || @vmax
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12
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if @vmin
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mask = (data >= @vmin)
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14
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mask = mask.and(data <= @vmax) if @vmax
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15
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+
else
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mask = (data <= @vmax)
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end
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data = NArrayMiss.to_nam(data, mask)
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elsif @missval # only missing_value is present.
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mask = (data.ne(@missval))
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data = NArrayMiss.to_nam(data, mask)
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end
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data
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end
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def get_with_miss_and_scaling(*args)
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27
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__interpret_missing_params if !defined?(@missval)
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data = simple_get(*args)
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29
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if @vmin || @vmax
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if @vmin
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mask = (data >= @vmin)
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mask = mask.and(data <= @vmax) if @vmax
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else
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mask = (data <= @vmax)
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end
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data = NArrayMiss.to_nam(data, mask)
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elsif @missval # only missing_value is present.
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mask = (data.ne(@missval))
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data = NArrayMiss.to_nam(data, mask)
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end
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data = unpack( data )
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data
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end
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45
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def put_with_miss(data, *args)
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if data.is_a?( NArrayMiss )
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__interpret_missing_params if !defined?(@missval)
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if @missval
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simple_put(data.to_na(@missval), *args)
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else
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simple_put(data.to_na, *args)
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end
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else
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simple_put(data, *args)
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end
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end
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def put_with_miss_and_scaling(data, *args)
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if data.is_a?( NArrayMiss )
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__interpret_missing_params if !defined?(@missval)
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if @missval
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data = pack( data )
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data = data.to_na(@missval)
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else
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data = pack( data )
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data = data.to_na
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end
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simple_put(data, *args)
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else
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scaled_put(data, *args)
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end
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end
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######### private ##########
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def __interpret_missing_params
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# Interprets the specification of missing data,
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# either by valid_range, (valid_min and/or valid_max), or missing_value.
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# (unlike the NetCDF User's guide (NUG), missing_value is interpreted,
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# but valid_* has a higher precedence.)
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# Always sets @missval whether missing_value is defined or not,
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# since it will be used as a fill value for data missing.
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#
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@vmin = att('valid_min')
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@vmin = @vmin.get if @vmin # kept in a NArray(size==1) to consv type
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@vmax = att('valid_max')
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@vmax = @vmax.get if @vmax # kept in a NArray(size==1) to consv type
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vrange = att('valid_range')
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89
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vrange = vrange.get if vrange
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if vrange
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vrange.sort!
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@vmin = vrange[0..0] # kept in... (same)
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@vmax = vrange[-1..-1] # kept in... (same)
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end
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@missval = att('missing_value') || att('_FillValue')
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@missval = @missval.get if @missval # kept in... (same)
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sf = att('scale_factor')
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ao = att('add_offset')
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if ( sf || ao )
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101
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## Both NUG & CF conventions requires to specify the valid
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## range with respect to the external (i.e. packed) values.
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## However, some conventions require specification
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104
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## with respect to unpacked values. The following
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105
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## is to support such cases as well:
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106
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thres_tp = [ self.typecode, NArray::LINT ].max
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107
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@missval = pack(@missval) if @missval && @missval.typecode > thres_tp
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108
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@vmin = pack(@vmin) if @vmin && @vmin.typecode > thres_tp
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109
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@vmax = pack(@vmax) if @vmax && @vmax.typecode > thres_tp
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110
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end
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111
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112
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if @missval
|
113
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if @vmin && @vmax
|
114
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if @vmin[0] <= @missval[0] && @missval[0] <= @vmax[0]
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warn "WARNING: missing_value #{@missval[0]} is in the valid range #{@vmin[0]}..#{@vmax[0]} --> will be ignored (#{__FILE__}:#{__LINE__})"
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116
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+
end
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else
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118
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if @vmin && @missval[0] >= @vmin[0]
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warn "WARNING: missing_value #{@missval[0]} >= valid min #{@vmin[0]} --> will be ignored (#{__FILE__}:#{__LINE__})"
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120
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elsif @vmax && @missval[0] <= @vmax[0]
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121
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warn "WARNING: missing_value #{@missval[0]} <= valid min #{@vmin[0]} --> will be ignored (#{__FILE__}:#{__LINE__})"
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122
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end
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123
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end
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124
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else
|
125
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realtc = NArray::SFLOAT
|
126
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if @vmin
|
127
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if @vmin[0] >= 0
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128
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@missval = ( @vmin.typecode>=realtc ? 0.99*@vmin : @vmin-1 )
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129
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else
|
130
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@missval = ( @vmin.typecode>=realtc ? 1.01*@vmin : @vmin-1 )
|
131
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+
end
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132
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elsif @vmax
|
133
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if @vmax[0] >= 0
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134
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@missval = ( @vmax.typecode>=realtc ? 1.01*@vmax : @vmax+1 )
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135
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else
|
136
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@missval = ( @vmax.typecode>=realtc ? 0.99*@vmax : @vmax+1 )
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137
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end
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138
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end
|
139
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end
|
140
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+
|
141
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end
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142
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|
143
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private :__interpret_missing_params
|
144
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+
|
145
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+
end
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146
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+
|
147
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end
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148
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|
149
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if $0 == __FILE__
|
150
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include NumRu
|
151
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|
152
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filename = "tmp.nc"
|
153
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print "creating ",filename,"...\n"
|
154
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file=NetCDF.create(filename)
|
155
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nx = 10
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156
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dimx = file.def_dim("x",nx)
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157
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xf = file.def_var("xf","sfloat",[dimx])
|
158
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xfn = file.def_var("xfn","sfloat",[dimx])
|
159
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xf.put_att("valid_range",[-1e12,1e12])
|
160
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+
f = 10 ** (2*NArray.sfloat(nx).indgen!)
|
161
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xr = file.def_var("xr","sint",[dimx])
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162
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xr.put_att("valid_max",[0.5])
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163
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xr.put_att("scale_factor",1e-4)
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164
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xr.put_att("add_offset",0.5)
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165
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xr2 = file.def_var("xr2","sint",[dimx])
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166
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xr2.put_att("valid_max",NArray.sint(1).fill!(1000))
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167
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xr2.put_att("scale_factor",1e-4)
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168
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xr2.put_att("add_offset",0.5)
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169
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r = NArray.sfloat(nx).indgen!/nx
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170
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file.enddef
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171
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xf.put(f)
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172
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xfn.put(f)
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173
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xr.scaled_put(r)
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174
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file.close
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175
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176
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file = NetCDF.open(filename,'r+')
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177
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xf = file.var('xf')
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178
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xfn = file.var('xfn')
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179
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p "f0"
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180
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xf.get.each{|v| print "#{v} "} ; print "\n"
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181
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p( 'f1', nam = xf.get_with_miss )
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182
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def xf.get(*args); get_with_miss(*args); end
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183
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p( 'f12', xf[2..-3].to_na )
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184
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p( 'fn10', xfn.get_with_miss )
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185
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p( 'fn11', xfn.get_with_miss_and_scaling )
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186
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nam.invalidation([0,1])
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187
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p 'f2', nam
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188
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xf.put_with_miss(nam)
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189
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p( 'f3', xf.get_with_miss )
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190
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xr = file.var('xr')
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191
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p "r0"
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192
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xr.simple_get.each{|v| print "#{v} "} ; print "\n"
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193
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p( 'r1', xr.get_with_miss_and_scaling )
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194
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def xr.get(*args); get_with_miss_and_scaling(*args); end
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195
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def xr.put(*args); put_with_miss_and_scaling(*args); end
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196
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#xr[0..3] = xr[0..3]*10
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197
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p( 'r2', xr.get_with_miss_and_scaling )
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198
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p 'r',r
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199
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xr2.put_with_miss_and_scaling(r)
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200
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p 'xr2',xr2.get_with_miss_and_scaling
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201
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file.close
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202
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print "** ncdump tmp.nc **\n", `ncdump tmp.nc`
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203
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end
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data/netcdfraw.c
ADDED
@@ -0,0 +1,4613 @@
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1
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+
#include<stdio.h>
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2
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#include "ruby.h"
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3
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#include "narray.h"
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4
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#include<netcdf.h>
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5
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#include<string.h>
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6
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+
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7
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/* for compatibility with ruby 1.6 */
|
8
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#ifndef RSTRING_PTR
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9
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#define RSTRING_PTR(s) (RSTRING(s)->ptr)
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10
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#endif
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11
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#ifndef RSTRING_LEN
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12
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#define RSTRING_LEN(s) (RSTRING(s)->len)
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13
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+
#endif
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14
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#ifndef RARRAY_PTR
|
15
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#define RARRAY_PTR(a) (RARRAY(a)->ptr)
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+
#endif
|
17
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+
#ifndef RARRAY_LEN
|
18
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#define RARRAY_LEN(a) (RARRAY(a)->len)
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19
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+
#endif
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20
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+
#ifndef StringValueCStr
|
21
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+
#define StringValueCStr(s) STR2CSTR(s)
|
22
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+
#endif
|
23
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#ifndef SafeStringValue
|
24
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#define SafeStringValue(s) Check_SafeStr(s)
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25
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+
#endif
|
26
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+
|
27
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/* Data to NArray */
|
28
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+
|
29
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+
/* memcpy(ary->ptr,nc_ptr,na_sizeof[NA_SINT]*ary->total); \ */
|
30
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+
|
31
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#define Cbyte_to_NArray(v, rank, shape, up) \
|
32
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+
{ \
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33
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struct NARRAY *ary; \
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34
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v = na_make_object(NA_BYTE, rank, shape, cNArray); \
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35
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GetNArray(v,ary); \
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36
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+
up = (unsigned char *)ary->ptr; \
|
37
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+
}
|
38
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+
|
39
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+
#define Csint_to_NArray(v, rank, shape, sp) \
|
40
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+
{ \
|
41
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+
struct NARRAY *ary; \
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42
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v = na_make_object(NA_SINT, rank, shape, cNArray); \
|
43
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+
GetNArray(v, ary); \
|
44
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+
sp = (short *)ary->ptr; \
|
45
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+
}
|
46
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+
|
47
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+
#define Clint_to_NArray(v, rank, shape, lp) \
|
48
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+
{ \
|
49
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+
struct NARRAY *ary; \
|
50
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+
v = na_make_object(NA_LINT, rank, shape, cNArray); \
|
51
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+
GetNArray(v, ary); \
|
52
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+
lp = (int *)ary->ptr; \
|
53
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+
}
|
54
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+
#define Cfloat_to_NArray(v, rank, shape, fp) \
|
55
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+
{ \
|
56
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+
struct NARRAY *ary; \
|
57
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+
v = na_make_object(NA_SFLOAT, rank, shape, cNArray); \
|
58
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+
GetNArray(v, ary); \
|
59
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+
fp = (float *)ary->ptr; \
|
60
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+
}
|
61
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+
#define Cdouble_to_NArray(v, rank, shape, dp); \
|
62
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+
{ \
|
63
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+
struct NARRAY *ary; \
|
64
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+
v = na_make_object(NA_DFLOAT, rank, shape, cNArray); \
|
65
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+
GetNArray(v, ary); \
|
66
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+
dp = (double *)ary->ptr; \
|
67
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+
}
|
68
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+
|
69
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+
/* Array or NArray to pointer and length (with no new allocation) */
|
70
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+
|
71
|
+
#define Array_to_Cfloat_len(obj, ptr, len) \
|
72
|
+
{ \
|
73
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+
struct NARRAY *na; \
|
74
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+
obj = na_cast_object(obj, NA_SFLOAT); \
|
75
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+
GetNArray(obj, na); \
|
76
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+
ptr = (float *) NA_PTR(na,0); \
|
77
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+
len = na->total; \
|
78
|
+
}
|
79
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+
|
80
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+
#define Array_to_Cfloat_len_shape(obj, ptr, len, shape) \
|
81
|
+
{ \
|
82
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+
struct NARRAY *na; \
|
83
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+
obj = na_cast_object(obj, NA_SFLOAT); \
|
84
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+
GetNArray(obj, na); \
|
85
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+
ptr = (float *) NA_PTR(na,0); \
|
86
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+
len = na->total; \
|
87
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+
shape = na->shape; \
|
88
|
+
}
|
89
|
+
|
90
|
+
#define Array_to_Cdouble_len(obj, ptr, len) \
|
91
|
+
{ \
|
92
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+
struct NARRAY *na; \
|
93
|
+
obj = na_cast_object(obj, NA_DFLOAT); \
|
94
|
+
GetNArray(obj, na); \
|
95
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+
ptr = (double *) NA_PTR(na,0); \
|
96
|
+
len = na->total; \
|
97
|
+
}
|
98
|
+
#define Array_to_Cdouble_len_shape(obj, ptr, len, shape) \
|
99
|
+
{ \
|
100
|
+
struct NARRAY *na; \
|
101
|
+
obj = na_cast_object(obj, NA_DFLOAT); \
|
102
|
+
GetNArray(obj, na); \
|
103
|
+
ptr = (double *) NA_PTR(na,0); \
|
104
|
+
len = na->total; \
|
105
|
+
shape = na->shape; \
|
106
|
+
}
|
107
|
+
|
108
|
+
#define Array_to_Cbyte_len(obj, ptr, len) \
|
109
|
+
{ \
|
110
|
+
struct NARRAY *na; \
|
111
|
+
obj = na_cast_object(obj, NA_BYTE); \
|
112
|
+
GetNArray(obj, na); \
|
113
|
+
ptr = (u_int8_t *) NA_PTR(na,0); \
|
114
|
+
len = na->total; \
|
115
|
+
}
|
116
|
+
|
117
|
+
#define Array_to_Cbyte_len_shape(obj, ptr, len, shape) \
|
118
|
+
{ \
|
119
|
+
struct NARRAY *na; \
|
120
|
+
obj = na_cast_object(obj, NA_BYTE); \
|
121
|
+
GetNArray(obj, na); \
|
122
|
+
ptr = (u_int8_t *) NA_PTR(na,0); \
|
123
|
+
len = na->total; \
|
124
|
+
shape = na->shape; \
|
125
|
+
}
|
126
|
+
|
127
|
+
#define Array_to_Csint_len(obj, ptr, len) \
|
128
|
+
{ \
|
129
|
+
struct NARRAY *na; \
|
130
|
+
obj = na_cast_object(obj, NA_SINT); \
|
131
|
+
GetNArray(obj, na); \
|
132
|
+
ptr = (int16_t *) NA_PTR(na,0); \
|
133
|
+
len = na->total; \
|
134
|
+
}
|
135
|
+
|
136
|
+
#define Array_to_Csint_len_shape(obj, ptr, len, shape) \
|
137
|
+
{ \
|
138
|
+
struct NARRAY *na; \
|
139
|
+
obj = na_cast_object(obj, NA_SINT); \
|
140
|
+
GetNArray(obj, na); \
|
141
|
+
ptr = (int16_t *) NA_PTR(na,0); \
|
142
|
+
len = na->total; \
|
143
|
+
shape = na->shape; \
|
144
|
+
}
|
145
|
+
|
146
|
+
|
147
|
+
#define Array_to_Clint_len(obj, ptr, len) \
|
148
|
+
{ \
|
149
|
+
struct NARRAY *na; \
|
150
|
+
obj = na_cast_object(obj, NA_LINT); \
|
151
|
+
GetNArray(obj, na); \
|
152
|
+
ptr = (int32_t *) NA_PTR(na,0); \
|
153
|
+
len = na->total; \
|
154
|
+
}
|
155
|
+
|
156
|
+
#define Array_to_Clint_len_shape(obj, ptr, len, shape) \
|
157
|
+
{ \
|
158
|
+
struct NARRAY *na; \
|
159
|
+
obj = na_cast_object(obj, NA_LINT); \
|
160
|
+
GetNArray(obj, na); \
|
161
|
+
ptr = (int32_t *) NA_PTR(na,0); \
|
162
|
+
len = na->total; \
|
163
|
+
shape = na->shape; \
|
164
|
+
}
|
165
|
+
|
166
|
+
|
167
|
+
/* Array or NArray to pointer (with no new allocation) */
|
168
|
+
|
169
|
+
#define Array_to_Cfloat(obj, ptr) \
|
170
|
+
{ \
|
171
|
+
struct NARRAY *na; \
|
172
|
+
obj = na_cast_object(obj, NA_SFLOAT); \
|
173
|
+
GetNArray(obj, na); \
|
174
|
+
ptr = (float *) NA_PTR(na,0); \
|
175
|
+
}
|
176
|
+
#define Array_to_Cdouble(obj, ptr) \
|
177
|
+
{ \
|
178
|
+
struct NARRAY *na; \
|
179
|
+
obj = na_cast_object(obj, NA_DFLOAT); \
|
180
|
+
GetNArray(obj, na); \
|
181
|
+
ptr = (double *) NA_PTR(na,0); \
|
182
|
+
}
|
183
|
+
#define Array_to_Cbyte(obj, ptr) \
|
184
|
+
{ \
|
185
|
+
struct NARRAY *na; \
|
186
|
+
obj = na_cast_object(obj, NA_BYTE); \
|
187
|
+
GetNArray(obj, na); \
|
188
|
+
ptr = (u_int8_t *) NA_PTR(na,0); \
|
189
|
+
}
|
190
|
+
#define Array_to_Csint(obj, ptr) \
|
191
|
+
{ \
|
192
|
+
struct NARRAY *na; \
|
193
|
+
obj = na_cast_object(obj, NA_SINT); \
|
194
|
+
GetNArray(obj, na); \
|
195
|
+
ptr = (int16_t *) NA_PTR(na,0); \
|
196
|
+
}
|
197
|
+
#define Array_to_Clint(obj, ptr) \
|
198
|
+
{ \
|
199
|
+
struct NARRAY *na; \
|
200
|
+
obj = na_cast_object(obj, NA_LINT); \
|
201
|
+
GetNArray(obj, na); \
|
202
|
+
ptr = (int32_t *) NA_PTR(na,0); \
|
203
|
+
}
|
204
|
+
|
205
|
+
#define NC_RAISE(status) rb_raise(err_status2class(status),(nc_strerror(status)))
|
206
|
+
|
207
|
+
static VALUE mNumRu = 0;
|
208
|
+
static VALUE cNetCDF;
|
209
|
+
static VALUE cNetCDFDim;
|
210
|
+
static VALUE cNetCDFAtt;
|
211
|
+
static VALUE cNetCDFVar;
|
212
|
+
|
213
|
+
static VALUE rb_eNetcdfError;
|
214
|
+
static VALUE rb_eNetcdfBadid;
|
215
|
+
static VALUE rb_eNetcdfNfile;
|
216
|
+
static VALUE rb_eNetcdfExist;
|
217
|
+
static VALUE rb_eNetcdfInval;
|
218
|
+
static VALUE rb_eNetcdfPerm;
|
219
|
+
static VALUE rb_eNetcdfNotindefine;
|
220
|
+
static VALUE rb_eNetcdfIndefine;
|
221
|
+
static VALUE rb_eNetcdfInvalcoords;
|
222
|
+
static VALUE rb_eNetcdfMaxdims;
|
223
|
+
static VALUE rb_eNetcdfNameinuse;
|
224
|
+
static VALUE rb_eNetcdfNotatt;
|
225
|
+
static VALUE rb_eNetcdfMaxatts;
|
226
|
+
static VALUE rb_eNetcdfBadtype;
|
227
|
+
static VALUE rb_eNetcdfBaddim;
|
228
|
+
static VALUE rb_eNetcdfUnlimpos;
|
229
|
+
static VALUE rb_eNetcdfMaxvars;
|
230
|
+
static VALUE rb_eNetcdfNotvar;
|
231
|
+
static VALUE rb_eNetcdfGlobal;
|
232
|
+
static VALUE rb_eNetcdfNotnc;
|
233
|
+
static VALUE rb_eNetcdfSts;
|
234
|
+
static VALUE rb_eNetcdfMaxname;
|
235
|
+
static VALUE rb_eNetcdfUnlimit;
|
236
|
+
static VALUE rb_eNetcdfNorecvars;
|
237
|
+
static VALUE rb_eNetcdfChar;
|
238
|
+
static VALUE rb_eNetcdfEdge;
|
239
|
+
static VALUE rb_eNetcdfStride;
|
240
|
+
static VALUE rb_eNetcdfBadname;
|
241
|
+
static VALUE rb_eNetcdfRange;
|
242
|
+
static VALUE rb_eNetcdfNomem;
|
243
|
+
|
244
|
+
/* Special Error */
|
245
|
+
/* Global error status */
|
246
|
+
|
247
|
+
static VALUE rb_eNetcdfFatal;
|
248
|
+
|
249
|
+
/* Global options variable. Used to determine behavior of error handler. */
|
250
|
+
|
251
|
+
static VALUE rb_eNetcdfEntool;
|
252
|
+
static VALUE rb_eNetcdfExdr;
|
253
|
+
static VALUE rb_eNetcdfSyserr;
|
254
|
+
|
255
|
+
|
256
|
+
struct Netcdf{
|
257
|
+
int ncid;
|
258
|
+
char *name;
|
259
|
+
int closed;
|
260
|
+
};
|
261
|
+
|
262
|
+
struct NetCDFDim{
|
263
|
+
int dimid;
|
264
|
+
int ncid;
|
265
|
+
};
|
266
|
+
|
267
|
+
struct NetCDFVar{
|
268
|
+
int varid;
|
269
|
+
int ncid;
|
270
|
+
VALUE file;
|
271
|
+
};
|
272
|
+
|
273
|
+
struct NetCDFAtt{
|
274
|
+
int varid;
|
275
|
+
int ncid;
|
276
|
+
char *name;
|
277
|
+
};
|
278
|
+
|
279
|
+
static struct Netcdf *
|
280
|
+
NetCDF_init(int ncid,char *filename)
|
281
|
+
{
|
282
|
+
struct Netcdf *Netcdffile;
|
283
|
+
Netcdffile=xmalloc(sizeof(struct Netcdf));
|
284
|
+
Netcdffile->ncid=ncid;
|
285
|
+
Netcdffile->closed=0;
|
286
|
+
Netcdffile->name=xmalloc((strlen(filename)+1)*sizeof(char));
|
287
|
+
strcpy(Netcdffile->name,filename);
|
288
|
+
return(Netcdffile);
|
289
|
+
}
|
290
|
+
|
291
|
+
static struct NetCDFDim *
|
292
|
+
NetCDF_dim_init(int ncid,int dimid)
|
293
|
+
{
|
294
|
+
struct NetCDFDim *Netcdf_dim;
|
295
|
+
Netcdf_dim=xmalloc(sizeof(struct NetCDFDim));
|
296
|
+
Netcdf_dim->dimid=dimid;
|
297
|
+
Netcdf_dim->ncid=ncid;
|
298
|
+
return(Netcdf_dim);
|
299
|
+
}
|
300
|
+
|
301
|
+
static struct NetCDFVar *
|
302
|
+
NetCDF_var_init(int ncid,int varid,VALUE file)
|
303
|
+
{
|
304
|
+
struct NetCDFVar *Netcdf_var;
|
305
|
+
Netcdf_var=xmalloc(sizeof(struct NetCDFVar));
|
306
|
+
Netcdf_var->varid=varid;
|
307
|
+
Netcdf_var->ncid=ncid;
|
308
|
+
Netcdf_var->file=file;
|
309
|
+
return(Netcdf_var);
|
310
|
+
}
|
311
|
+
static struct NetCDFAtt *
|
312
|
+
NetCDF_att_init(int ncid,int varid,char *attname)
|
313
|
+
{
|
314
|
+
struct NetCDFAtt *Netcdf_att;
|
315
|
+
Netcdf_att=xmalloc(sizeof(struct NetCDFAtt));
|
316
|
+
Netcdf_att->ncid=ncid;
|
317
|
+
Netcdf_att->varid=varid;
|
318
|
+
Netcdf_att->name=xmalloc((strlen(attname)+1)*sizeof(char));
|
319
|
+
strcpy(Netcdf_att->name,attname);
|
320
|
+
return(Netcdf_att);
|
321
|
+
}
|
322
|
+
|
323
|
+
void
|
324
|
+
Netcdf_att_free(struct NetCDFAtt *Netcdf_att)
|
325
|
+
{
|
326
|
+
free(Netcdf_att->name);
|
327
|
+
free(Netcdf_att);
|
328
|
+
}
|
329
|
+
|
330
|
+
void
|
331
|
+
NetCDF_var_free(struct NetCDFVar *Netcdf_var)
|
332
|
+
{
|
333
|
+
free(Netcdf_var);
|
334
|
+
}
|
335
|
+
|
336
|
+
void
|
337
|
+
NetCDF_dim_free(struct NetCDFDim *Netcdf_dim)
|
338
|
+
{
|
339
|
+
free(Netcdf_dim);
|
340
|
+
}
|
341
|
+
|
342
|
+
void
|
343
|
+
NetCDF_free(struct Netcdf *Netcdffile)
|
344
|
+
{
|
345
|
+
int status;
|
346
|
+
if (!Netcdffile->closed){
|
347
|
+
status = nc_close(Netcdffile->ncid); /* no error check -- not to stop during GC */
|
348
|
+
}
|
349
|
+
free(Netcdffile->name);
|
350
|
+
free(Netcdffile);
|
351
|
+
}
|
352
|
+
|
353
|
+
static VALUE
|
354
|
+
err_status2class(int status)
|
355
|
+
{
|
356
|
+
if(NC_ISSYSERR(status)){
|
357
|
+
return(rb_eNetcdfSyserr);
|
358
|
+
}
|
359
|
+
switch(status)
|
360
|
+
{
|
361
|
+
case(NC_EBADID):
|
362
|
+
return(rb_eNetcdfBadid);break;
|
363
|
+
case(NC_ENFILE):
|
364
|
+
return(rb_eNetcdfNfile);break;
|
365
|
+
case(NC_EEXIST):
|
366
|
+
return(rb_eNetcdfExist);break;
|
367
|
+
case(NC_EINVAL):
|
368
|
+
return(rb_eNetcdfInval);break;
|
369
|
+
case(NC_EPERM):
|
370
|
+
return(rb_eNetcdfPerm);break;
|
371
|
+
case(NC_ENOTINDEFINE):
|
372
|
+
return(rb_eNetcdfNotindefine);break;
|
373
|
+
case(NC_EINDEFINE):
|
374
|
+
return(rb_eNetcdfIndefine);break;
|
375
|
+
case(NC_EINVALCOORDS):
|
376
|
+
return(rb_eNetcdfInvalcoords);break;
|
377
|
+
case(NC_EMAXDIMS):
|
378
|
+
return(rb_eNetcdfMaxdims);break;
|
379
|
+
case(NC_ENAMEINUSE):
|
380
|
+
return(rb_eNetcdfNameinuse);break;
|
381
|
+
case(NC_ENOTATT):
|
382
|
+
return(rb_eNetcdfNotatt);break;
|
383
|
+
case(NC_EMAXATTS):
|
384
|
+
return(rb_eNetcdfMaxatts);break;
|
385
|
+
case(NC_EBADTYPE):
|
386
|
+
return(rb_eNetcdfBadtype);break;
|
387
|
+
case(NC_EBADDIM):
|
388
|
+
return(rb_eNetcdfBaddim);break;
|
389
|
+
case(NC_EUNLIMPOS):
|
390
|
+
return(rb_eNetcdfUnlimpos);break;
|
391
|
+
case(NC_EMAXVARS):
|
392
|
+
return(rb_eNetcdfMaxvars);break;
|
393
|
+
case(NC_ENOTVAR):
|
394
|
+
return(rb_eNetcdfNotvar);break;
|
395
|
+
case(NC_EGLOBAL):
|
396
|
+
return(rb_eNetcdfGlobal);break;
|
397
|
+
case(NC_ENOTNC):
|
398
|
+
return(rb_eNetcdfNotnc);break;
|
399
|
+
case(NC_ESTS):
|
400
|
+
return(rb_eNetcdfSts);break;
|
401
|
+
case(NC_EMAXNAME):
|
402
|
+
return(rb_eNetcdfMaxname);break;
|
403
|
+
case(NC_EUNLIMIT):
|
404
|
+
return(rb_eNetcdfUnlimit);break;
|
405
|
+
case(NC_ENORECVARS):
|
406
|
+
return(rb_eNetcdfNorecvars);break;
|
407
|
+
case(NC_ECHAR):
|
408
|
+
return(rb_eNetcdfChar);break;
|
409
|
+
case(NC_EEDGE):
|
410
|
+
return(rb_eNetcdfEdge);break;
|
411
|
+
case(NC_ESTRIDE):
|
412
|
+
return(rb_eNetcdfStride);break;
|
413
|
+
case(NC_EBADNAME):
|
414
|
+
return(rb_eNetcdfBadname);break;
|
415
|
+
case(NC_ERANGE):
|
416
|
+
return(rb_eNetcdfRange);break;
|
417
|
+
case(NC_ENOMEM):
|
418
|
+
return(rb_eNetcdfNomem);break;
|
419
|
+
/* case(NC_ENTOOL):
|
420
|
+
return(rb_eNetcdfEntool);break; */
|
421
|
+
case(NC_EXDR):
|
422
|
+
return(rb_eNetcdfExdr);break;
|
423
|
+
case(NC_SYSERR):
|
424
|
+
return(rb_eNetcdfSyserr);break;
|
425
|
+
case(NC_FATAL):
|
426
|
+
return(rb_eNetcdfFatal);break;
|
427
|
+
}
|
428
|
+
}
|
429
|
+
|
430
|
+
static const char*
|
431
|
+
nctype2natype(int nctype){
|
432
|
+
switch(nctype){
|
433
|
+
case NC_CHAR:
|
434
|
+
return("char");
|
435
|
+
case NC_BYTE:
|
436
|
+
return("byte");
|
437
|
+
case NC_SHORT:
|
438
|
+
return("sint");
|
439
|
+
case NC_INT:
|
440
|
+
return("int");
|
441
|
+
case NC_FLOAT:
|
442
|
+
return("sfloat");
|
443
|
+
case NC_DOUBLE:
|
444
|
+
return("float");
|
445
|
+
default:
|
446
|
+
rb_raise(rb_eNetcdfError, "No such netcdf type number %d\n",nctype);
|
447
|
+
}
|
448
|
+
}
|
449
|
+
|
450
|
+
static int
|
451
|
+
nctype2natypecode(int nctype){
|
452
|
+
switch(nctype){
|
453
|
+
case NC_CHAR:
|
454
|
+
return(NA_BYTE);
|
455
|
+
case NC_BYTE:
|
456
|
+
return(NA_BYTE);
|
457
|
+
case NC_SHORT:
|
458
|
+
return(NA_SINT);
|
459
|
+
case NC_INT:
|
460
|
+
return(NA_LINT);
|
461
|
+
case NC_FLOAT:
|
462
|
+
return(NA_SFLOAT);
|
463
|
+
case NC_DOUBLE:
|
464
|
+
return(NA_DFLOAT);
|
465
|
+
default:
|
466
|
+
rb_raise(rb_eNetcdfError, "No such netcdf type number %d\n",nctype);
|
467
|
+
}
|
468
|
+
}
|
469
|
+
|
470
|
+
static int
|
471
|
+
natype2nctype(char *natype)
|
472
|
+
{
|
473
|
+
if(strcmp(natype,"byte")==0) return(NC_BYTE);
|
474
|
+
else if(strcmp(natype,"char")==0) return(NC_CHAR);
|
475
|
+
else if(strcmp(natype,"text")==0) return(NC_CHAR); /* alias of char */
|
476
|
+
else if(strcmp(natype,"string")==0) return(NC_CHAR); /* alias of char */
|
477
|
+
else if(strcmp(natype,"sint")==0) return(NC_SHORT);
|
478
|
+
else if(strcmp(natype,"int")==0) return(NC_INT);
|
479
|
+
else if(strcmp(natype,"sfloat")==0) return(NC_FLOAT);
|
480
|
+
else if(strcmp(natype,"float")==0) return(NC_DOUBLE);
|
481
|
+
else rb_raise(rb_eNetcdfError, "No such NArray type '%s'",natype);
|
482
|
+
}
|
483
|
+
|
484
|
+
static int
|
485
|
+
natypecode2nctype(int natypecode)
|
486
|
+
{
|
487
|
+
if(natypecode==NA_BYTE) return(NC_BYTE);
|
488
|
+
else if(natypecode==NA_SINT) return(NC_SHORT);
|
489
|
+
else if(natypecode==NA_LINT) return(NC_INT);
|
490
|
+
else if(natypecode==NA_SFLOAT) return(NC_FLOAT);
|
491
|
+
else if(natypecode==NA_DFLOAT) return(NC_DOUBLE);
|
492
|
+
else rb_raise(rb_eNetcdfError, "No such NArray typecode '%d'",natypecode);
|
493
|
+
}
|
494
|
+
|
495
|
+
static void
|
496
|
+
nc_mark_obj(struct NetCDFVar *netcdf_var)
|
497
|
+
{
|
498
|
+
VALUE ptr;
|
499
|
+
|
500
|
+
ptr = netcdf_var->file;
|
501
|
+
rb_gc_mark(ptr);
|
502
|
+
}
|
503
|
+
|
504
|
+
|
505
|
+
VALUE
|
506
|
+
NetCDF_clone(VALUE file)
|
507
|
+
{
|
508
|
+
VALUE clone;
|
509
|
+
struct Netcdf *nc1, *nc2;
|
510
|
+
|
511
|
+
Data_Get_Struct(file, struct Netcdf, nc1);
|
512
|
+
nc2 = NetCDF_init(nc1->ncid, nc1->name);
|
513
|
+
clone = Data_Wrap_Struct(cNetCDF, 0, NetCDF_free, nc2);
|
514
|
+
CLONESETUP(clone, file);
|
515
|
+
return clone;
|
516
|
+
}
|
517
|
+
|
518
|
+
VALUE
|
519
|
+
NetCDF_dim_clone(VALUE dim)
|
520
|
+
{
|
521
|
+
VALUE clone;
|
522
|
+
struct NetCDFDim *nd1, *nd2;
|
523
|
+
|
524
|
+
Data_Get_Struct(dim, struct NetCDFDim, nd1);
|
525
|
+
nd2 = NetCDF_dim_init(nd1->ncid, nd1->dimid);
|
526
|
+
clone = Data_Wrap_Struct(cNetCDFDim, 0, NetCDF_dim_free, nd2);
|
527
|
+
CLONESETUP(clone, dim);
|
528
|
+
return clone;
|
529
|
+
}
|
530
|
+
|
531
|
+
VALUE
|
532
|
+
NetCDF_att_clone(VALUE att)
|
533
|
+
{
|
534
|
+
VALUE clone;
|
535
|
+
struct NetCDFAtt *na1, *na2;
|
536
|
+
|
537
|
+
Data_Get_Struct(att, struct NetCDFAtt, na1);
|
538
|
+
na2 = NetCDF_att_init(na1->ncid, na1->varid, na1->name);
|
539
|
+
clone = Data_Wrap_Struct(cNetCDFAtt, 0, Netcdf_att_free, na2);
|
540
|
+
CLONESETUP(clone, att);
|
541
|
+
return clone;
|
542
|
+
}
|
543
|
+
|
544
|
+
VALUE
|
545
|
+
NetCDF_var_clone(VALUE var)
|
546
|
+
{
|
547
|
+
VALUE clone;
|
548
|
+
struct NetCDFVar *nv1, *nv2;
|
549
|
+
|
550
|
+
Data_Get_Struct(var, struct NetCDFVar, nv1);
|
551
|
+
nv2 = NetCDF_var_init(nv1->ncid, nv1->varid, nv1->file);
|
552
|
+
clone = Data_Wrap_Struct(cNetCDFVar, nc_mark_obj, NetCDF_var_free, nv2);
|
553
|
+
CLONESETUP(clone, var);
|
554
|
+
return clone;
|
555
|
+
}
|
556
|
+
|
557
|
+
VALUE
|
558
|
+
NetCDF_close(file)
|
559
|
+
VALUE file;
|
560
|
+
{
|
561
|
+
int status;
|
562
|
+
int ncid;
|
563
|
+
struct Netcdf *Netcdffile;
|
564
|
+
|
565
|
+
if (rb_safe_level() >= 4 && !OBJ_TAINTED(file)) {
|
566
|
+
rb_raise(rb_eSecurityError, "Insecure: can't close");
|
567
|
+
}
|
568
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
569
|
+
ncid=Netcdffile->ncid;
|
570
|
+
if(!Netcdffile->closed){
|
571
|
+
status = nc_close(ncid);
|
572
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
573
|
+
Netcdffile->closed = 1;
|
574
|
+
} else {
|
575
|
+
rb_warn("file %s is already closed", Netcdffile->name);
|
576
|
+
}
|
577
|
+
return Qnil;
|
578
|
+
}
|
579
|
+
|
580
|
+
VALUE
|
581
|
+
NetCDF_def_dim(VALUE file,VALUE dim_name,VALUE length)
|
582
|
+
{
|
583
|
+
char* c_dim_name;
|
584
|
+
size_t c_length;
|
585
|
+
int ncid;
|
586
|
+
int dimidp;
|
587
|
+
int status;
|
588
|
+
struct Netcdf *Netcdffile;
|
589
|
+
struct NetCDFDim *Netcdf_dim;
|
590
|
+
VALUE Dimension;
|
591
|
+
|
592
|
+
rb_secure(4);
|
593
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
594
|
+
|
595
|
+
Check_Type(dim_name,T_STRING);
|
596
|
+
c_dim_name=RSTRING_PTR(dim_name);
|
597
|
+
c_length=NUM2UINT(length);
|
598
|
+
ncid=Netcdffile->ncid;
|
599
|
+
|
600
|
+
status = nc_def_dim(ncid,c_dim_name,c_length,&dimidp);
|
601
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
602
|
+
|
603
|
+
Netcdf_dim = NetCDF_dim_init(ncid,dimidp);
|
604
|
+
|
605
|
+
Dimension = Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim);
|
606
|
+
return Dimension;
|
607
|
+
}
|
608
|
+
|
609
|
+
|
610
|
+
static VALUE
|
611
|
+
NetCDF_put_att_char(int ncid, char *name,VALUE value,VALUE atttype, int varid)
|
612
|
+
{
|
613
|
+
int status;
|
614
|
+
struct NetCDFAtt *ncatt;
|
615
|
+
|
616
|
+
/* check atttype (not necessarily needed but it's better to do it) */
|
617
|
+
if (TYPE(atttype) == T_STRING){
|
618
|
+
if ( natype2nctype(RSTRING_PTR(atttype)) != NC_CHAR ) {
|
619
|
+
rb_raise(rb_eNetcdfError,
|
620
|
+
"attribute type must be 'char' (or nil) for a String value");
|
621
|
+
}
|
622
|
+
} else if (TYPE(atttype) != T_NIL) {
|
623
|
+
rb_raise(rb_eNetcdfError,
|
624
|
+
"type specfication must be by a string or nil");
|
625
|
+
}
|
626
|
+
/* put value */
|
627
|
+
Check_Type(value,T_STRING);
|
628
|
+
status = nc_put_att_text(ncid, varid, name,
|
629
|
+
RSTRING_LEN(value), RSTRING_PTR(value));
|
630
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
631
|
+
|
632
|
+
ncatt = NetCDF_att_init(ncid,varid,name);
|
633
|
+
return (Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,ncatt));
|
634
|
+
}
|
635
|
+
|
636
|
+
static VALUE
|
637
|
+
NetCDF_put_att_numeric(int ncid, char *name,VALUE value,VALUE atttype, int varid)
|
638
|
+
{
|
639
|
+
VALUE val;
|
640
|
+
struct NARRAY *na_val;
|
641
|
+
int na_typecode, status, len;
|
642
|
+
char *ptr;
|
643
|
+
struct NetCDFAtt *ncatt;
|
644
|
+
|
645
|
+
/* check atttype and cast to an appropriate NArray if needed */
|
646
|
+
|
647
|
+
if (TYPE(atttype) != T_NIL){
|
648
|
+
na_typecode = na_get_typecode(atttype);
|
649
|
+
GetNArray( na_cast_object(value, na_typecode), na_val );
|
650
|
+
} else {
|
651
|
+
if (TYPE(value)==T_ARRAY) {
|
652
|
+
val = RARRAY_PTR(value)[0]; /* to check the 1st elemnt if Array */
|
653
|
+
} else {
|
654
|
+
val = value;
|
655
|
+
}
|
656
|
+
switch(TYPE(val)){
|
657
|
+
case T_FIXNUM:
|
658
|
+
case T_BIGNUM:
|
659
|
+
na_typecode = NA_LINT;
|
660
|
+
GetNArray( na_cast_object(value, na_typecode), na_val );
|
661
|
+
break;
|
662
|
+
case T_FLOAT:
|
663
|
+
na_typecode = NA_DFLOAT;
|
664
|
+
GetNArray( na_cast_object(value, na_typecode), na_val );
|
665
|
+
break;
|
666
|
+
case T_DATA:
|
667
|
+
if ( IsNArray(value) ){
|
668
|
+
GetNArray(value,na_val);
|
669
|
+
na_typecode = na_val->type;
|
670
|
+
} else {
|
671
|
+
rb_raise(rb_eNetcdfError,"value has a wrong data type");
|
672
|
+
}
|
673
|
+
break;
|
674
|
+
default:
|
675
|
+
rb_raise(rb_eNetcdfError,
|
676
|
+
"value (or its first element) has a wrong type");
|
677
|
+
}
|
678
|
+
}
|
679
|
+
|
680
|
+
/* put value */
|
681
|
+
|
682
|
+
len = na_val->total;
|
683
|
+
ptr = na_val->ptr;
|
684
|
+
switch(na_typecode){
|
685
|
+
case NA_BYTE:
|
686
|
+
status = nc_put_att_uchar(ncid,varid,name,NC_BYTE,len,(unsigned char *)ptr);
|
687
|
+
break;
|
688
|
+
case NA_SINT:
|
689
|
+
status = nc_put_att_short(ncid,varid,name,NC_SHORT,len,(short *)ptr);
|
690
|
+
break;
|
691
|
+
case NA_LINT:
|
692
|
+
status = nc_put_att_int(ncid,varid,name,NC_INT,len,(int *)ptr);
|
693
|
+
break;
|
694
|
+
case NA_SFLOAT:
|
695
|
+
status = nc_put_att_float(ncid,varid,name,NC_FLOAT,len,(float *)ptr);
|
696
|
+
break;
|
697
|
+
case NA_DFLOAT:
|
698
|
+
status = nc_put_att_double(ncid,varid,name,NC_DOUBLE,len,(double*)ptr);
|
699
|
+
break;
|
700
|
+
default:
|
701
|
+
rb_raise(rb_eNetcdfError,
|
702
|
+
"unsupported type. code = %d",na_typecode);
|
703
|
+
}
|
704
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
705
|
+
|
706
|
+
ncatt = NetCDF_att_init(ncid,varid,name);
|
707
|
+
return (Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,ncatt));
|
708
|
+
}
|
709
|
+
|
710
|
+
static VALUE
|
711
|
+
NetCDF_put_att__(int ncid, char *name, VALUE value, VALUE atttype, int varid)
|
712
|
+
/*
|
713
|
+
* atttype: nil or a String ("string","int",etc). If nil,
|
714
|
+
* the type of attribute is determined from the type of value
|
715
|
+
*/
|
716
|
+
{
|
717
|
+
switch(TYPE(value)){
|
718
|
+
case T_STRING:
|
719
|
+
return(NetCDF_put_att_char(ncid, name, value, atttype, varid));
|
720
|
+
default:
|
721
|
+
return(NetCDF_put_att_numeric(ncid, name, value, atttype, varid));
|
722
|
+
}
|
723
|
+
}
|
724
|
+
|
725
|
+
VALUE
|
726
|
+
NetCDF_put_att(VALUE file,VALUE att_name,VALUE value,VALUE atttype)
|
727
|
+
/*
|
728
|
+
* atttype: nil or a String ("string","int",etc). If nil,
|
729
|
+
* the type of attribute is determined from the type of value
|
730
|
+
*/
|
731
|
+
{
|
732
|
+
struct Netcdf *ncfile;
|
733
|
+
char *name;
|
734
|
+
|
735
|
+
rb_secure(4);
|
736
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
737
|
+
Check_Type(att_name,T_STRING);
|
738
|
+
name = RSTRING_PTR(att_name);
|
739
|
+
|
740
|
+
return( NetCDF_put_att__(ncfile->ncid, name, value, atttype, NC_GLOBAL) );
|
741
|
+
}
|
742
|
+
|
743
|
+
VALUE
|
744
|
+
NetCDF_put_att_var(VALUE var,VALUE att_name,VALUE value,VALUE atttype)
|
745
|
+
/*
|
746
|
+
* atttype: nil or a String ("string","int",etc). If nil,
|
747
|
+
* the type of attribute is determined from the type of value
|
748
|
+
*/
|
749
|
+
{
|
750
|
+
struct NetCDFVar *ncvar;
|
751
|
+
char *name;
|
752
|
+
|
753
|
+
rb_secure(4);
|
754
|
+
Data_Get_Struct(var,struct NetCDFVar,ncvar);
|
755
|
+
Check_Type(att_name,T_STRING);
|
756
|
+
name = RSTRING_PTR(att_name);
|
757
|
+
|
758
|
+
return( NetCDF_put_att__(ncvar->ncid, name, value, atttype, ncvar->varid));
|
759
|
+
}
|
760
|
+
|
761
|
+
|
762
|
+
VALUE
|
763
|
+
NetCDF_def_var(VALUE file,VALUE var_name,VALUE vartype,VALUE dimensions)
|
764
|
+
{
|
765
|
+
int ncid;
|
766
|
+
char *c_var_name;
|
767
|
+
static int xtype;
|
768
|
+
long c_ndims;
|
769
|
+
int varidp;
|
770
|
+
int dimidp;
|
771
|
+
int i=0;
|
772
|
+
int status;
|
773
|
+
char *c_dim_name;
|
774
|
+
int c_dimids[NC_MAX_DIMS];
|
775
|
+
struct Netcdf *Netcdffile;
|
776
|
+
struct NetCDFVar *Netcdf_var;
|
777
|
+
struct NetCDFDim *Netcdf_dim;
|
778
|
+
VALUE Var;
|
779
|
+
|
780
|
+
rb_secure(4);
|
781
|
+
Check_Type(var_name,T_STRING);
|
782
|
+
Check_Type(dimensions,T_ARRAY);
|
783
|
+
|
784
|
+
c_var_name=RSTRING_PTR(var_name);
|
785
|
+
c_ndims=RARRAY_LEN(dimensions);
|
786
|
+
|
787
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
788
|
+
ncid=Netcdffile->ncid;
|
789
|
+
|
790
|
+
if (TYPE(vartype) == T_STRING){
|
791
|
+
xtype = natype2nctype(RSTRING_PTR(vartype));
|
792
|
+
} else if (TYPE(vartype) == T_FIXNUM){
|
793
|
+
xtype = natypecode2nctype(NUM2INT(vartype));
|
794
|
+
} else {
|
795
|
+
rb_raise(rb_eNetcdfError,
|
796
|
+
"type specfication must be by a string or nil");
|
797
|
+
}
|
798
|
+
|
799
|
+
for(i=0;i<c_ndims;i++){
|
800
|
+
switch(TYPE(RARRAY_PTR(dimensions)[c_ndims-1-i])){
|
801
|
+
case T_STRING:
|
802
|
+
Check_Type(RARRAY_PTR(dimensions)[c_ndims-1-i],T_STRING);
|
803
|
+
c_dim_name=StringValueCStr(RARRAY_PTR(dimensions)[c_ndims-1-i]);
|
804
|
+
status=nc_inq_dimid(ncid,c_dim_name,&dimidp);
|
805
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
806
|
+
c_dimids[i]=dimidp;
|
807
|
+
break;
|
808
|
+
case T_DATA:
|
809
|
+
Data_Get_Struct(RARRAY_PTR(dimensions)[c_ndims-1-i],struct NetCDFDim,Netcdf_dim);
|
810
|
+
c_dimids[i]=Netcdf_dim->dimid;
|
811
|
+
break;
|
812
|
+
default:
|
813
|
+
rb_raise(rb_eNetcdfError, "No such object of the netCDF dimension class.");
|
814
|
+
}
|
815
|
+
}
|
816
|
+
|
817
|
+
status = nc_def_var(ncid,c_var_name,xtype,c_ndims,c_dimids,&varidp);
|
818
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
819
|
+
|
820
|
+
Netcdf_var = NetCDF_var_init(ncid,varidp,file);
|
821
|
+
|
822
|
+
Var=Data_Wrap_Struct(cNetCDFVar,nc_mark_obj,NetCDF_var_free,Netcdf_var);
|
823
|
+
return Var;
|
824
|
+
}
|
825
|
+
|
826
|
+
|
827
|
+
VALUE
|
828
|
+
NetCDF_dim(VALUE file,VALUE dim_name)
|
829
|
+
{
|
830
|
+
int ncid;
|
831
|
+
char *c_dim_name;
|
832
|
+
int dimidp;
|
833
|
+
int status;
|
834
|
+
struct Netcdf *Netcdffile;
|
835
|
+
struct NetCDFDim *Netcdf_dim;
|
836
|
+
VALUE Dimension;
|
837
|
+
|
838
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
839
|
+
ncid=Netcdffile->ncid;
|
840
|
+
Check_Type(dim_name,T_STRING);
|
841
|
+
c_dim_name=RSTRING_PTR(dim_name);
|
842
|
+
|
843
|
+
status = nc_inq_dimid(ncid,c_dim_name,&dimidp);
|
844
|
+
if(status !=NC_NOERR){
|
845
|
+
if(status == NC_EBADDIM){
|
846
|
+
return(Qnil); /*2003/08/27 back to orig (from changes on 2003/02/03)*/
|
847
|
+
} else{
|
848
|
+
NC_RAISE(status);
|
849
|
+
}
|
850
|
+
}
|
851
|
+
|
852
|
+
Netcdf_dim=NetCDF_dim_init(ncid,dimidp);
|
853
|
+
|
854
|
+
Dimension = Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim);
|
855
|
+
return Dimension;
|
856
|
+
}
|
857
|
+
|
858
|
+
VALUE
|
859
|
+
NetCDF_var(VALUE file,VALUE var_name)
|
860
|
+
{
|
861
|
+
int ncid;
|
862
|
+
int status;
|
863
|
+
int varidp;
|
864
|
+
char *c_var_name;
|
865
|
+
struct Netcdf *Netcdffile;
|
866
|
+
struct NetCDFVar *Netcdf_var;
|
867
|
+
VALUE Variable;
|
868
|
+
|
869
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
870
|
+
ncid=Netcdffile->ncid;
|
871
|
+
Check_Type(var_name,T_STRING);
|
872
|
+
c_var_name=RSTRING_PTR(var_name);
|
873
|
+
|
874
|
+
status=nc_inq_varid(ncid,c_var_name,&varidp);
|
875
|
+
if(status != NC_NOERR){
|
876
|
+
if(status == NC_ENOTVAR){
|
877
|
+
return(Qnil); /*2003/08/27 back to orig (from changes on 2003/02/03)*/
|
878
|
+
} else{
|
879
|
+
NC_RAISE(status);
|
880
|
+
}
|
881
|
+
}
|
882
|
+
|
883
|
+
Netcdf_var = NetCDF_var_init(ncid,varidp,file);
|
884
|
+
Variable = Data_Wrap_Struct(cNetCDFVar,nc_mark_obj,NetCDF_var_free,Netcdf_var);
|
885
|
+
return Variable;
|
886
|
+
}
|
887
|
+
|
888
|
+
VALUE
|
889
|
+
NetCDF_att(VALUE file,VALUE att_name)
|
890
|
+
{
|
891
|
+
int ncid;
|
892
|
+
int status;
|
893
|
+
int attnump;
|
894
|
+
char *c_att_name;
|
895
|
+
struct Netcdf *Netcdffile;
|
896
|
+
struct NetCDFAtt *Netcdf_att;
|
897
|
+
VALUE Attribute;
|
898
|
+
|
899
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
900
|
+
ncid=Netcdffile->ncid;
|
901
|
+
Check_Type(att_name,T_STRING);
|
902
|
+
c_att_name=RSTRING_PTR(att_name);
|
903
|
+
|
904
|
+
|
905
|
+
status = nc_inq_attid(ncid,NC_GLOBAL,c_att_name,&attnump);
|
906
|
+
if(status != NC_NOERR){
|
907
|
+
if(status == NC_ENOTATT){
|
908
|
+
return(Qnil);
|
909
|
+
}
|
910
|
+
else{
|
911
|
+
NC_RAISE(status);
|
912
|
+
}
|
913
|
+
}
|
914
|
+
|
915
|
+
Netcdf_att = NetCDF_att_init(ncid,NC_GLOBAL,c_att_name);
|
916
|
+
|
917
|
+
Attribute = Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,Netcdf_att);
|
918
|
+
|
919
|
+
return Attribute;
|
920
|
+
}
|
921
|
+
VALUE
|
922
|
+
NetCDF_fill(VALUE file,VALUE mode)
|
923
|
+
{
|
924
|
+
int ncid;
|
925
|
+
int status;
|
926
|
+
struct Netcdf *Netcdffile;
|
927
|
+
int old_modep;
|
928
|
+
|
929
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
930
|
+
ncid = Netcdffile->ncid;
|
931
|
+
if(mode==Qfalse){
|
932
|
+
status = nc_set_fill(ncid,NC_NOFILL,&old_modep);
|
933
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
934
|
+
}
|
935
|
+
else if(mode == Qtrue){
|
936
|
+
status = nc_set_fill(ncid,NC_FILL,&old_modep);
|
937
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
938
|
+
}
|
939
|
+
else
|
940
|
+
rb_raise(rb_eNetcdfError,"Usage:self.fill(true) or self.fill(false)");
|
941
|
+
return Qnil;
|
942
|
+
}
|
943
|
+
|
944
|
+
VALUE
|
945
|
+
NetCDF_redef(VALUE file)
|
946
|
+
{
|
947
|
+
int ncid;
|
948
|
+
int status;
|
949
|
+
struct Netcdf *Netcdffile;
|
950
|
+
|
951
|
+
rb_secure(4);
|
952
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
953
|
+
ncid=Netcdffile->ncid;
|
954
|
+
status = nc_redef(ncid);
|
955
|
+
if(status !=NC_NOERR){
|
956
|
+
if(status == NC_EINDEFINE){
|
957
|
+
return Qnil;
|
958
|
+
}
|
959
|
+
else{
|
960
|
+
NC_RAISE(status);
|
961
|
+
}
|
962
|
+
}
|
963
|
+
return Qtrue;
|
964
|
+
}
|
965
|
+
|
966
|
+
VALUE
|
967
|
+
NetCDF_enddef(VALUE file)
|
968
|
+
{
|
969
|
+
int ncid;
|
970
|
+
int status;
|
971
|
+
struct Netcdf *Netcdffile;
|
972
|
+
|
973
|
+
rb_secure(4);
|
974
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
975
|
+
ncid=Netcdffile->ncid;
|
976
|
+
status = nc_enddef(ncid);
|
977
|
+
if(status !=NC_NOERR){
|
978
|
+
if(status == NC_ENOTINDEFINE){
|
979
|
+
return Qnil;
|
980
|
+
}
|
981
|
+
else{
|
982
|
+
NC_RAISE(status);
|
983
|
+
}
|
984
|
+
}
|
985
|
+
return Qtrue;
|
986
|
+
}
|
987
|
+
|
988
|
+
VALUE
|
989
|
+
NetCDF_whether_in_define_mode(VALUE file)
|
990
|
+
{
|
991
|
+
/* returns true if the NetCDF object is currently in the define mode,
|
992
|
+
false if in the data mode, and
|
993
|
+
nil if else (possibly the file is read-only, or some other
|
994
|
+
error occurred)
|
995
|
+
*/
|
996
|
+
int ncid;
|
997
|
+
int status;
|
998
|
+
struct Netcdf *Netcdffile;
|
999
|
+
|
1000
|
+
rb_secure(4);
|
1001
|
+
Data_Get_Struct(file,struct Netcdf,Netcdffile);
|
1002
|
+
ncid=Netcdffile->ncid;
|
1003
|
+
status = nc_redef(ncid);
|
1004
|
+
if(status == NC_EINDEFINE){
|
1005
|
+
return Qtrue;
|
1006
|
+
} else if(status == NC_NOERR) {
|
1007
|
+
/* was in the data mode --> recover the data mode and report false */
|
1008
|
+
status = nc_enddef(ncid);
|
1009
|
+
if(status == NC_NOERR) {
|
1010
|
+
return Qfalse;
|
1011
|
+
} else {
|
1012
|
+
return Qnil;
|
1013
|
+
}
|
1014
|
+
} else {
|
1015
|
+
return Qnil;
|
1016
|
+
}
|
1017
|
+
}
|
1018
|
+
|
1019
|
+
VALUE
|
1020
|
+
NetCDF_open(VALUE mod,VALUE filename,VALUE omode)
|
1021
|
+
{
|
1022
|
+
int status;
|
1023
|
+
int ncid;
|
1024
|
+
char* c_filename;
|
1025
|
+
int c_omode;
|
1026
|
+
struct Netcdf *ncfile;
|
1027
|
+
VALUE retval;
|
1028
|
+
|
1029
|
+
Check_Type(filename,T_STRING);
|
1030
|
+
SafeStringValue(filename);
|
1031
|
+
c_filename=RSTRING_PTR(filename);
|
1032
|
+
Check_Type(omode,T_FIXNUM);
|
1033
|
+
c_omode=NUM2INT(omode);
|
1034
|
+
|
1035
|
+
status = nc_open(c_filename,c_omode,&ncid);
|
1036
|
+
if(status !=NC_NOERR){NC_RAISE(status);}
|
1037
|
+
|
1038
|
+
ncfile = NetCDF_init(ncid,c_filename);
|
1039
|
+
retval = Data_Wrap_Struct(cNetCDF,0,NetCDF_free,ncfile);
|
1040
|
+
return( retval );
|
1041
|
+
}
|
1042
|
+
|
1043
|
+
VALUE
|
1044
|
+
NetCDF_create(VALUE mod,VALUE filename,VALUE cmode)
|
1045
|
+
{
|
1046
|
+
int ncid;
|
1047
|
+
int status;
|
1048
|
+
char* c_filename;
|
1049
|
+
int c_cmode;
|
1050
|
+
struct Netcdf *ncfile;
|
1051
|
+
|
1052
|
+
Check_Type(filename,T_STRING);
|
1053
|
+
SafeStringValue(filename);
|
1054
|
+
c_filename=RSTRING_PTR(filename);
|
1055
|
+
Check_Type(cmode,T_FIXNUM);
|
1056
|
+
c_cmode=NUM2INT(cmode);
|
1057
|
+
|
1058
|
+
status = nc_create(c_filename,c_cmode,&ncid);
|
1059
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1060
|
+
|
1061
|
+
ncfile = NetCDF_init(ncid,c_filename);
|
1062
|
+
return( Data_Wrap_Struct(cNetCDF,0,NetCDF_free,ncfile) );
|
1063
|
+
}
|
1064
|
+
|
1065
|
+
VALUE
|
1066
|
+
NetCDF_ndims(VALUE file)
|
1067
|
+
{
|
1068
|
+
int ncid;
|
1069
|
+
int ndimsp;
|
1070
|
+
VALUE Integer;
|
1071
|
+
int status;
|
1072
|
+
struct Netcdf *ncfile;
|
1073
|
+
|
1074
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1075
|
+
ncid=ncfile->ncid;
|
1076
|
+
status = nc_inq_ndims(ncid,&ndimsp);
|
1077
|
+
if(status != NC_NOERR) NC_RAISE (status);
|
1078
|
+
Integer = INT2NUM(ndimsp);
|
1079
|
+
return Integer;
|
1080
|
+
}
|
1081
|
+
|
1082
|
+
VALUE
|
1083
|
+
NetCDF_nvars(VALUE file)
|
1084
|
+
{
|
1085
|
+
int ncid;
|
1086
|
+
int nvarsp;
|
1087
|
+
int status;
|
1088
|
+
VALUE Integer;
|
1089
|
+
struct Netcdf *ncfile;
|
1090
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1091
|
+
ncid=ncfile->ncid;
|
1092
|
+
status = nc_inq_nvars(ncid,&nvarsp);
|
1093
|
+
if(status != NC_NOERR) NC_RAISE (status);
|
1094
|
+
Integer = INT2NUM(nvarsp);
|
1095
|
+
return Integer;
|
1096
|
+
}
|
1097
|
+
|
1098
|
+
VALUE
|
1099
|
+
NetCDF_natts(VALUE file)
|
1100
|
+
{
|
1101
|
+
int ncid;
|
1102
|
+
int nattsp;
|
1103
|
+
int status;
|
1104
|
+
VALUE Integer;
|
1105
|
+
struct Netcdf *ncfile;
|
1106
|
+
|
1107
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1108
|
+
ncid=ncfile->ncid;
|
1109
|
+
status=nc_inq_natts(ncid,&nattsp);
|
1110
|
+
if(status != NC_NOERR) NC_RAISE (status);
|
1111
|
+
Integer = INT2NUM(nattsp);
|
1112
|
+
return Integer;
|
1113
|
+
}
|
1114
|
+
|
1115
|
+
VALUE
|
1116
|
+
NetCDF_unlimited(VALUE file)
|
1117
|
+
{
|
1118
|
+
int ncid;
|
1119
|
+
int unlimdimidp;
|
1120
|
+
int status;
|
1121
|
+
struct Netcdf *ncfile;
|
1122
|
+
struct NetCDFDim *Netcdf_dim;
|
1123
|
+
VALUE Dimension;
|
1124
|
+
|
1125
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1126
|
+
ncid=ncfile->ncid;
|
1127
|
+
status=nc_inq_unlimdim(ncid,&unlimdimidp);
|
1128
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
1129
|
+
|
1130
|
+
Netcdf_dim = NetCDF_dim_init(ncid,unlimdimidp);
|
1131
|
+
|
1132
|
+
/* If unlimdimidp=-1,No unlimited dimension is defined in the netCDF dataset */
|
1133
|
+
if(unlimdimidp != -1)
|
1134
|
+
{
|
1135
|
+
Dimension = Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim);
|
1136
|
+
return Dimension;
|
1137
|
+
}
|
1138
|
+
else
|
1139
|
+
{
|
1140
|
+
return Qnil;
|
1141
|
+
}
|
1142
|
+
}
|
1143
|
+
|
1144
|
+
VALUE
|
1145
|
+
NetCDF_sync(VALUE file)
|
1146
|
+
{
|
1147
|
+
int ncid;
|
1148
|
+
int status;
|
1149
|
+
struct Netcdf *ncfile;
|
1150
|
+
|
1151
|
+
rb_secure(4);
|
1152
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1153
|
+
ncid=ncfile->ncid;
|
1154
|
+
status = nc_sync(ncid);
|
1155
|
+
if(status !=NC_NOERR) NC_RAISE (status);
|
1156
|
+
return Qnil;
|
1157
|
+
}
|
1158
|
+
|
1159
|
+
VALUE
|
1160
|
+
NetCDF_path(VALUE file)
|
1161
|
+
{
|
1162
|
+
char *path;
|
1163
|
+
struct Netcdf *ncfile;
|
1164
|
+
|
1165
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1166
|
+
path=ncfile->name;
|
1167
|
+
return(rb_str_new2(path));
|
1168
|
+
}
|
1169
|
+
|
1170
|
+
VALUE
|
1171
|
+
NetCDF_dim_length(VALUE Dim)
|
1172
|
+
{
|
1173
|
+
int ncid;
|
1174
|
+
int status;
|
1175
|
+
int dimid;
|
1176
|
+
size_t lengthp;
|
1177
|
+
struct NetCDFDim *Netcdf_dim;
|
1178
|
+
|
1179
|
+
Data_Get_Struct(Dim,struct NetCDFDim,Netcdf_dim);
|
1180
|
+
ncid=Netcdf_dim->ncid;
|
1181
|
+
dimid=Netcdf_dim->dimid;
|
1182
|
+
|
1183
|
+
status = nc_inq_dimlen(ncid,dimid,&lengthp);
|
1184
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1185
|
+
|
1186
|
+
return(INT2NUM(lengthp));
|
1187
|
+
}
|
1188
|
+
|
1189
|
+
VALUE
|
1190
|
+
NetCDF_dim_name(VALUE Dim,VALUE dimension_newname)
|
1191
|
+
{
|
1192
|
+
int ncid;
|
1193
|
+
int status;
|
1194
|
+
int dimid;
|
1195
|
+
char *c_dim_name;
|
1196
|
+
struct NetCDFDim *Netcdf_dim;
|
1197
|
+
|
1198
|
+
rb_secure(4);
|
1199
|
+
Data_Get_Struct(Dim,struct NetCDFDim,Netcdf_dim);
|
1200
|
+
ncid=Netcdf_dim->ncid;
|
1201
|
+
dimid=Netcdf_dim->dimid;
|
1202
|
+
Check_Type(dimension_newname,T_STRING);
|
1203
|
+
c_dim_name = StringValueCStr(dimension_newname);
|
1204
|
+
|
1205
|
+
status = nc_rename_dim(ncid,dimid,c_dim_name);
|
1206
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
1207
|
+
|
1208
|
+
return Qnil;
|
1209
|
+
}
|
1210
|
+
|
1211
|
+
VALUE
|
1212
|
+
NetCDF_dim_inqname(VALUE Dim)
|
1213
|
+
{
|
1214
|
+
int ncid;
|
1215
|
+
int status;
|
1216
|
+
int dimid;
|
1217
|
+
char c_dim_name[NC_MAX_NAME];
|
1218
|
+
struct NetCDFDim *Netcdf_dim;
|
1219
|
+
VALUE str;
|
1220
|
+
|
1221
|
+
Data_Get_Struct(Dim,struct NetCDFDim,Netcdf_dim);
|
1222
|
+
ncid=Netcdf_dim->ncid;
|
1223
|
+
dimid=Netcdf_dim->dimid;
|
1224
|
+
|
1225
|
+
status = nc_inq_dimname(ncid,dimid,c_dim_name);
|
1226
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
1227
|
+
|
1228
|
+
str = rb_str_new2(c_dim_name);
|
1229
|
+
OBJ_TAINT(str);
|
1230
|
+
return(str);
|
1231
|
+
}
|
1232
|
+
|
1233
|
+
VALUE
|
1234
|
+
NetCDF_dim_whether_unlimited(VALUE Dim)
|
1235
|
+
{
|
1236
|
+
int status;
|
1237
|
+
int uldid;
|
1238
|
+
struct NetCDFDim *Netcdf_dim;
|
1239
|
+
|
1240
|
+
Data_Get_Struct(Dim,struct NetCDFDim,Netcdf_dim);
|
1241
|
+
status=nc_inq_unlimdim(Netcdf_dim->ncid,&uldid);
|
1242
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
1243
|
+
if(Netcdf_dim->dimid == uldid){
|
1244
|
+
return(Qtrue);
|
1245
|
+
} else {
|
1246
|
+
return(Qfalse);
|
1247
|
+
}
|
1248
|
+
}
|
1249
|
+
|
1250
|
+
VALUE
|
1251
|
+
NetCDF_att_inq_name(VALUE Att)
|
1252
|
+
{
|
1253
|
+
char *c_att_name;
|
1254
|
+
struct NetCDFAtt *Netcdf_att;
|
1255
|
+
VALUE str;
|
1256
|
+
|
1257
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1258
|
+
c_att_name=Netcdf_att->name;
|
1259
|
+
|
1260
|
+
str = rb_str_new2(c_att_name);
|
1261
|
+
OBJ_TAINT(str);
|
1262
|
+
return(str);
|
1263
|
+
}
|
1264
|
+
|
1265
|
+
VALUE
|
1266
|
+
NetCDF_att_rename(VALUE Att,VALUE new_att_name)
|
1267
|
+
{
|
1268
|
+
int ncid;
|
1269
|
+
int status;
|
1270
|
+
int varid;
|
1271
|
+
char *c_att_name;
|
1272
|
+
char *c_new_att_name;
|
1273
|
+
struct NetCDFAtt *Netcdf_att;
|
1274
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1275
|
+
ncid=Netcdf_att->ncid;
|
1276
|
+
varid=Netcdf_att->varid;
|
1277
|
+
|
1278
|
+
c_att_name=Netcdf_att->name;
|
1279
|
+
|
1280
|
+
Check_Type(new_att_name,T_STRING);
|
1281
|
+
SafeStringValue(new_att_name);
|
1282
|
+
c_new_att_name=StringValueCStr(new_att_name);
|
1283
|
+
|
1284
|
+
status = nc_rename_att(ncid,varid,c_att_name,c_new_att_name);
|
1285
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1286
|
+
|
1287
|
+
strcpy(Netcdf_att->name,c_new_att_name);
|
1288
|
+
return Qnil;
|
1289
|
+
}
|
1290
|
+
|
1291
|
+
VALUE
|
1292
|
+
NetCDF_id2dim(VALUE file,VALUE dimid)
|
1293
|
+
{
|
1294
|
+
int ncid;
|
1295
|
+
int c_dimid;
|
1296
|
+
struct Netcdf *ncfile;
|
1297
|
+
struct NetCDFDim *Netcdf_dim;
|
1298
|
+
VALUE Dim;
|
1299
|
+
|
1300
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1301
|
+
ncid=ncfile->ncid;
|
1302
|
+
Check_Type(dimid,T_FIXNUM);
|
1303
|
+
c_dimid=NUM2INT(dimid);
|
1304
|
+
Netcdf_dim = NetCDF_dim_init(ncid,c_dimid);
|
1305
|
+
Dim=Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim);
|
1306
|
+
return(Dim);
|
1307
|
+
}
|
1308
|
+
|
1309
|
+
VALUE
|
1310
|
+
NetCDF_id2var(VALUE file,VALUE varid)
|
1311
|
+
{
|
1312
|
+
int ncid;
|
1313
|
+
int c_varid;
|
1314
|
+
struct Netcdf *ncfile;
|
1315
|
+
struct NetCDFVar *Netcdf_var;
|
1316
|
+
VALUE Var;
|
1317
|
+
|
1318
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1319
|
+
ncid=ncfile->ncid;
|
1320
|
+
Check_Type(varid,T_FIXNUM);
|
1321
|
+
c_varid=NUM2INT(varid);
|
1322
|
+
Netcdf_var = NetCDF_var_init(ncid,c_varid,file);
|
1323
|
+
Var=Data_Wrap_Struct(cNetCDFVar,nc_mark_obj,NetCDF_var_free,Netcdf_var);
|
1324
|
+
return(Var);
|
1325
|
+
}
|
1326
|
+
|
1327
|
+
|
1328
|
+
VALUE
|
1329
|
+
NetCDF_id2att(VALUE file,VALUE attnum)
|
1330
|
+
{
|
1331
|
+
int ncid;
|
1332
|
+
int c_attnum;
|
1333
|
+
int status;
|
1334
|
+
struct Netcdf *ncfile;
|
1335
|
+
struct NetCDFAtt *Netcdf_att;
|
1336
|
+
char *c_att_name;
|
1337
|
+
VALUE Att;
|
1338
|
+
c_att_name=ALLOCA_N(char,NC_MAX_NAME);
|
1339
|
+
|
1340
|
+
Data_Get_Struct(file,struct Netcdf,ncfile);
|
1341
|
+
ncid=ncfile->ncid;
|
1342
|
+
|
1343
|
+
Check_Type(attnum,T_FIXNUM);
|
1344
|
+
c_attnum=NUM2INT(attnum);
|
1345
|
+
|
1346
|
+
status = nc_inq_attname(ncid,NC_GLOBAL,c_attnum,c_att_name);
|
1347
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1348
|
+
|
1349
|
+
Netcdf_att=NetCDF_att_init(ncid,NC_GLOBAL,c_att_name);
|
1350
|
+
|
1351
|
+
Att=Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,Netcdf_att);
|
1352
|
+
return(Att);
|
1353
|
+
|
1354
|
+
}
|
1355
|
+
|
1356
|
+
VALUE
|
1357
|
+
NetCDF_var_id2att(VALUE Var,VALUE attnum)
|
1358
|
+
{
|
1359
|
+
int ncid;
|
1360
|
+
int c_attnum;
|
1361
|
+
int status;
|
1362
|
+
int c_varid;
|
1363
|
+
struct NetCDFVar *Netcdf_var;
|
1364
|
+
struct NetCDFAtt *Netcdf_att;
|
1365
|
+
char *c_att_name;
|
1366
|
+
VALUE Att;
|
1367
|
+
|
1368
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1369
|
+
ncid=Netcdf_var->ncid;
|
1370
|
+
c_varid=Netcdf_var->varid;
|
1371
|
+
|
1372
|
+
Check_Type(attnum,T_FIXNUM);
|
1373
|
+
c_attnum=NUM2INT(attnum);
|
1374
|
+
|
1375
|
+
c_att_name=ALLOCA_N(char,NC_MAX_NAME);
|
1376
|
+
|
1377
|
+
status = nc_inq_attname(ncid,c_varid,c_attnum,c_att_name);
|
1378
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1379
|
+
|
1380
|
+
Netcdf_att=NetCDF_att_init(ncid,c_varid,c_att_name);
|
1381
|
+
Att=Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,Netcdf_att);
|
1382
|
+
return(Att);
|
1383
|
+
}
|
1384
|
+
|
1385
|
+
VALUE
|
1386
|
+
NetCDF_var_dims(VALUE Var)
|
1387
|
+
{
|
1388
|
+
int ncid, *dimids, ndims, varid, i, status;
|
1389
|
+
struct NetCDFVar *Netcdf_var;
|
1390
|
+
struct NetCDFDim *Netcdf_dim;
|
1391
|
+
VALUE Dims;
|
1392
|
+
|
1393
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1394
|
+
ncid = Netcdf_var->ncid;
|
1395
|
+
varid = Netcdf_var->varid;
|
1396
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
1397
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1398
|
+
dimids=ALLOCA_N(int,ndims);
|
1399
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
1400
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1401
|
+
Dims = rb_ary_new();
|
1402
|
+
for(i=0;i<ndims;i++){
|
1403
|
+
Netcdf_dim = NetCDF_dim_init(ncid,dimids[ndims-1-i]);
|
1404
|
+
rb_ary_push(Dims,
|
1405
|
+
Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim));
|
1406
|
+
}
|
1407
|
+
return(Dims);
|
1408
|
+
}
|
1409
|
+
|
1410
|
+
VALUE
|
1411
|
+
NetCDF_var_dim(VALUE Var, VALUE ith)
|
1412
|
+
{
|
1413
|
+
int ncid, *dimids, ndims, varid, status, c_ith;
|
1414
|
+
struct NetCDFVar *Netcdf_var;
|
1415
|
+
struct NetCDFDim *Netcdf_dim;
|
1416
|
+
VALUE Dim;
|
1417
|
+
|
1418
|
+
Check_Type(ith,T_FIXNUM);
|
1419
|
+
c_ith=NUM2INT(ith);
|
1420
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1421
|
+
ncid = Netcdf_var->ncid;
|
1422
|
+
varid = Netcdf_var->varid;
|
1423
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
1424
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1425
|
+
if(c_ith < 0 || c_ith >= ndims) {
|
1426
|
+
rb_raise(rb_eNetcdfError, "dimension count less than zero or greater than ndims-1");
|
1427
|
+
}
|
1428
|
+
dimids=ALLOCA_N(int,ndims);
|
1429
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
1430
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1431
|
+
Netcdf_dim = NetCDF_dim_init(ncid,dimids[ndims-1-c_ith]);
|
1432
|
+
Dim = Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim);
|
1433
|
+
return(Dim);
|
1434
|
+
}
|
1435
|
+
|
1436
|
+
VALUE
|
1437
|
+
NetCDF_att_copy(VALUE Att,VALUE Var_or_File)
|
1438
|
+
{
|
1439
|
+
int ncid_in,ncid_out;
|
1440
|
+
int status;
|
1441
|
+
int varid_in,varid_out;
|
1442
|
+
char *att_name;
|
1443
|
+
struct NetCDFAtt *Netcdf_att;
|
1444
|
+
struct NetCDFVar *Netcdf_var;
|
1445
|
+
struct Netcdf *ncfile;
|
1446
|
+
struct NetCDFAtt *Netcdf_att_out;
|
1447
|
+
|
1448
|
+
rb_secure(4);
|
1449
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1450
|
+
ncid_in=Netcdf_att->ncid;
|
1451
|
+
varid_in=Netcdf_att->varid;
|
1452
|
+
att_name=Netcdf_att->name;
|
1453
|
+
|
1454
|
+
if( rb_obj_is_kind_of(Var_or_File, cNetCDFVar) ){
|
1455
|
+
Data_Get_Struct(Var_or_File,struct NetCDFVar, Netcdf_var);
|
1456
|
+
ncid_out=Netcdf_var->ncid;
|
1457
|
+
varid_out=Netcdf_var->varid;
|
1458
|
+
} else if ( rb_obj_is_kind_of(Var_or_File, cNetCDF) ){
|
1459
|
+
Data_Get_Struct(Var_or_File,struct Netcdf, ncfile);
|
1460
|
+
ncid_out=ncfile->ncid;
|
1461
|
+
varid_out=NC_GLOBAL;
|
1462
|
+
} else {
|
1463
|
+
rb_raise(rb_eNetcdfError,"The argument must be a NetCDFVar or a NetCDF");
|
1464
|
+
}
|
1465
|
+
|
1466
|
+
status = nc_copy_att(ncid_in,varid_in,att_name,ncid_out,varid_out);
|
1467
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1468
|
+
Netcdf_att_out = NetCDF_att_init(ncid_out,varid_out,att_name);
|
1469
|
+
return (Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,Netcdf_att_out));
|
1470
|
+
}
|
1471
|
+
|
1472
|
+
VALUE
|
1473
|
+
NetCDF_att_atttype(VALUE Att)
|
1474
|
+
{
|
1475
|
+
int ncid;
|
1476
|
+
int varid;
|
1477
|
+
int status;
|
1478
|
+
char *att_name;
|
1479
|
+
const char *Attname;
|
1480
|
+
struct NetCDFAtt *Netcdf_att;
|
1481
|
+
nc_type xtypep;
|
1482
|
+
|
1483
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1484
|
+
ncid = Netcdf_att->ncid;
|
1485
|
+
varid = Netcdf_att->varid;
|
1486
|
+
att_name = Netcdf_att->name;
|
1487
|
+
|
1488
|
+
status = nc_inq_atttype(ncid,varid,att_name,&xtypep);
|
1489
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1490
|
+
|
1491
|
+
Attname = nctype2natype(xtypep);
|
1492
|
+
return(rb_str_new2(Attname));
|
1493
|
+
}
|
1494
|
+
|
1495
|
+
VALUE
|
1496
|
+
NetCDF_att_typecode(VALUE Att)
|
1497
|
+
{
|
1498
|
+
int ncid;
|
1499
|
+
int varid;
|
1500
|
+
int status;
|
1501
|
+
char *att_name;
|
1502
|
+
struct NetCDFAtt *Netcdf_att;
|
1503
|
+
nc_type xtypep;
|
1504
|
+
|
1505
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1506
|
+
ncid = Netcdf_att->ncid;
|
1507
|
+
varid = Netcdf_att->varid;
|
1508
|
+
att_name = Netcdf_att->name;
|
1509
|
+
|
1510
|
+
status = nc_inq_atttype(ncid,varid,att_name,&xtypep);
|
1511
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1512
|
+
|
1513
|
+
return(INT2NUM(nctype2natypecode(xtypep)));
|
1514
|
+
}
|
1515
|
+
|
1516
|
+
VALUE
|
1517
|
+
NetCDF_att_delete(VALUE Att)
|
1518
|
+
{
|
1519
|
+
int ncid;
|
1520
|
+
int status;
|
1521
|
+
int varid;
|
1522
|
+
char *c_att_name;
|
1523
|
+
struct NetCDFAtt *Netcdf_att;
|
1524
|
+
|
1525
|
+
rb_secure(4);
|
1526
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1527
|
+
|
1528
|
+
ncid=Netcdf_att->ncid;
|
1529
|
+
varid=Netcdf_att->varid;
|
1530
|
+
c_att_name=Netcdf_att->name;
|
1531
|
+
|
1532
|
+
status = nc_del_att(ncid,varid,c_att_name);
|
1533
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1534
|
+
|
1535
|
+
return Qnil;
|
1536
|
+
}
|
1537
|
+
|
1538
|
+
VALUE
|
1539
|
+
NetCDF_att_put(VALUE Att,VALUE value,VALUE atttype)
|
1540
|
+
/*
|
1541
|
+
* atttype: nil or a String ("string","int",etc). If nil,
|
1542
|
+
* the type of attribute is determined from the type of value
|
1543
|
+
*/
|
1544
|
+
{
|
1545
|
+
struct NetCDFAtt *ncatt;
|
1546
|
+
|
1547
|
+
rb_secure(4);
|
1548
|
+
Data_Get_Struct(Att,struct NetCDFAtt,ncatt);
|
1549
|
+
return( NetCDF_put_att__(ncatt->ncid, ncatt->name, value,
|
1550
|
+
atttype, ncatt->varid) );
|
1551
|
+
}
|
1552
|
+
|
1553
|
+
VALUE
|
1554
|
+
NetCDF_att_get(VALUE Att)
|
1555
|
+
{
|
1556
|
+
int ncid;
|
1557
|
+
int varid;
|
1558
|
+
char *c_attname;
|
1559
|
+
int status;
|
1560
|
+
struct NetCDFAtt *Netcdf_att;
|
1561
|
+
nc_type xtypep;
|
1562
|
+
size_t lenp;
|
1563
|
+
int attlen[1]; /* NArray uses int instead of size_t */
|
1564
|
+
char *tp;
|
1565
|
+
unsigned char *up;
|
1566
|
+
short *sp;
|
1567
|
+
int *ip;
|
1568
|
+
float *fp;
|
1569
|
+
double *dp;
|
1570
|
+
VALUE NArray;
|
1571
|
+
VALUE str;
|
1572
|
+
|
1573
|
+
Data_Get_Struct(Att,struct NetCDFAtt,Netcdf_att);
|
1574
|
+
ncid = Netcdf_att->ncid;
|
1575
|
+
varid = Netcdf_att->varid;
|
1576
|
+
c_attname = Netcdf_att->name;
|
1577
|
+
|
1578
|
+
status = nc_inq_atttype(ncid,varid,c_attname,&xtypep);
|
1579
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1580
|
+
|
1581
|
+
switch(xtypep){
|
1582
|
+
case NC_CHAR:
|
1583
|
+
status = nc_inq_attlen(ncid,varid,c_attname,&lenp);
|
1584
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1585
|
+
tp = ALLOCA_N(char,lenp+1);
|
1586
|
+
tp[lenp]= '\0';
|
1587
|
+
status = nc_get_att_text(ncid,varid,c_attname,tp);
|
1588
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1589
|
+
str = rb_str_new2(tp);
|
1590
|
+
OBJ_TAINT(str);
|
1591
|
+
return(str);
|
1592
|
+
break;
|
1593
|
+
case NC_BYTE:
|
1594
|
+
status = nc_inq_attlen(ncid,varid,c_attname,&lenp);
|
1595
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1596
|
+
|
1597
|
+
attlen[0]=lenp;
|
1598
|
+
Cbyte_to_NArray(NArray,1,attlen,up);
|
1599
|
+
|
1600
|
+
status = nc_get_att_uchar(ncid,varid,c_attname,up);
|
1601
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1602
|
+
|
1603
|
+
OBJ_TAINT(NArray);
|
1604
|
+
return NArray;
|
1605
|
+
break;
|
1606
|
+
case NC_SHORT:
|
1607
|
+
status = nc_inq_attlen(ncid,varid,c_attname,&lenp);
|
1608
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1609
|
+
|
1610
|
+
attlen[0]=lenp;
|
1611
|
+
Csint_to_NArray(NArray,1,attlen,sp);
|
1612
|
+
|
1613
|
+
status = nc_get_att_short(ncid,varid,c_attname,sp);
|
1614
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1615
|
+
OBJ_TAINT(NArray);
|
1616
|
+
return NArray;
|
1617
|
+
break;
|
1618
|
+
case NC_INT:
|
1619
|
+
status = nc_inq_attlen(ncid,varid,c_attname,&lenp);
|
1620
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1621
|
+
|
1622
|
+
attlen[0]=lenp;
|
1623
|
+
Clint_to_NArray(NArray,1,attlen,ip);
|
1624
|
+
|
1625
|
+
status = nc_get_att_int(ncid,varid,c_attname,ip);
|
1626
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1627
|
+
|
1628
|
+
OBJ_TAINT(NArray);
|
1629
|
+
return NArray;
|
1630
|
+
break;
|
1631
|
+
case NC_FLOAT:
|
1632
|
+
status = nc_inq_attlen(ncid,varid,c_attname,&lenp);
|
1633
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1634
|
+
|
1635
|
+
attlen[0]=lenp;
|
1636
|
+
Cfloat_to_NArray(NArray,1,attlen,fp);
|
1637
|
+
|
1638
|
+
status = nc_get_att_float(ncid,varid,c_attname,fp);
|
1639
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1640
|
+
|
1641
|
+
OBJ_TAINT(NArray);
|
1642
|
+
return NArray;
|
1643
|
+
break;
|
1644
|
+
case NC_DOUBLE:
|
1645
|
+
status = nc_inq_attlen(ncid,varid,c_attname,&lenp);
|
1646
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1647
|
+
|
1648
|
+
attlen[0]=lenp;
|
1649
|
+
Cdouble_to_NArray(NArray,1,attlen,dp);
|
1650
|
+
|
1651
|
+
status = nc_get_att_double(ncid,varid,c_attname,dp);
|
1652
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1653
|
+
OBJ_TAINT(NArray);
|
1654
|
+
return NArray;
|
1655
|
+
break;
|
1656
|
+
default:
|
1657
|
+
rb_raise(rb_eNetcdfError,"atttype isn't supported in netCDF");
|
1658
|
+
}
|
1659
|
+
return Qnil;
|
1660
|
+
}
|
1661
|
+
|
1662
|
+
|
1663
|
+
VALUE
|
1664
|
+
NetCDF_var_inq_name(VALUE Var)
|
1665
|
+
{
|
1666
|
+
int ncid;
|
1667
|
+
int status;
|
1668
|
+
int varid;
|
1669
|
+
char c_var_name[NC_MAX_NAME];
|
1670
|
+
struct NetCDFVar *Netcdf_var;
|
1671
|
+
VALUE Var_name;
|
1672
|
+
|
1673
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1674
|
+
|
1675
|
+
ncid=Netcdf_var->ncid;
|
1676
|
+
varid=Netcdf_var->varid;
|
1677
|
+
status = nc_inq_varname(ncid,varid,c_var_name);
|
1678
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1679
|
+
|
1680
|
+
Var_name=rb_str_new2(c_var_name);
|
1681
|
+
OBJ_TAINT(Var_name);
|
1682
|
+
return Var_name;
|
1683
|
+
}
|
1684
|
+
|
1685
|
+
VALUE
|
1686
|
+
NetCDF_var_ndims(VALUE Var)
|
1687
|
+
{
|
1688
|
+
int ncid;
|
1689
|
+
int status;
|
1690
|
+
int varid;
|
1691
|
+
int ndimsp;
|
1692
|
+
struct NetCDFVar *Netcdf_var;
|
1693
|
+
VALUE Var_ndims;
|
1694
|
+
|
1695
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1696
|
+
|
1697
|
+
ncid=Netcdf_var->ncid;
|
1698
|
+
varid=Netcdf_var->varid;
|
1699
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
1700
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1701
|
+
Var_ndims=INT2FIX(ndimsp);
|
1702
|
+
return Var_ndims;
|
1703
|
+
}
|
1704
|
+
|
1705
|
+
VALUE
|
1706
|
+
NetCDF_var_vartype(VALUE Var)
|
1707
|
+
{
|
1708
|
+
int ncid;
|
1709
|
+
int status;
|
1710
|
+
int varid;
|
1711
|
+
nc_type xtypep;
|
1712
|
+
struct NetCDFVar *Netcdf_var;
|
1713
|
+
const char *Vartype;
|
1714
|
+
|
1715
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1716
|
+
|
1717
|
+
ncid=Netcdf_var->ncid;
|
1718
|
+
varid=Netcdf_var->varid;
|
1719
|
+
|
1720
|
+
status = nc_inq_vartype(ncid,varid,&xtypep);
|
1721
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1722
|
+
|
1723
|
+
Vartype=nctype2natype(xtypep);
|
1724
|
+
return(rb_str_new2(Vartype));
|
1725
|
+
}
|
1726
|
+
|
1727
|
+
VALUE
|
1728
|
+
NetCDF_var_typecode(VALUE Var)
|
1729
|
+
{
|
1730
|
+
int ncid;
|
1731
|
+
int status;
|
1732
|
+
int varid;
|
1733
|
+
nc_type xtypep;
|
1734
|
+
struct NetCDFVar *Netcdf_var;
|
1735
|
+
|
1736
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1737
|
+
|
1738
|
+
ncid=Netcdf_var->ncid;
|
1739
|
+
varid=Netcdf_var->varid;
|
1740
|
+
|
1741
|
+
status = nc_inq_vartype(ncid,varid,&xtypep);
|
1742
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1743
|
+
|
1744
|
+
return(INT2NUM(nctype2natypecode(xtypep)));
|
1745
|
+
}
|
1746
|
+
|
1747
|
+
|
1748
|
+
VALUE
|
1749
|
+
NetCDF_var_natts(VALUE Var)
|
1750
|
+
{
|
1751
|
+
int ncid;
|
1752
|
+
int status;
|
1753
|
+
int varid;
|
1754
|
+
int nattsp;
|
1755
|
+
struct NetCDFVar *Netcdf_var;
|
1756
|
+
VALUE Var_natts;
|
1757
|
+
|
1758
|
+
|
1759
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1760
|
+
|
1761
|
+
ncid=Netcdf_var->ncid;
|
1762
|
+
varid=Netcdf_var->varid;
|
1763
|
+
|
1764
|
+
status= nc_inq_varnatts(ncid,varid,&nattsp);
|
1765
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
1766
|
+
|
1767
|
+
Var_natts=INT2FIX(nattsp);
|
1768
|
+
return Var_natts;
|
1769
|
+
}
|
1770
|
+
|
1771
|
+
VALUE
|
1772
|
+
NetCDF_var_file(VALUE Var)
|
1773
|
+
{
|
1774
|
+
struct NetCDFVar *Netcdf_var;
|
1775
|
+
/* VALUE file; */
|
1776
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1777
|
+
|
1778
|
+
return (Netcdf_var->file);
|
1779
|
+
}
|
1780
|
+
|
1781
|
+
VALUE
|
1782
|
+
NetCDF_var_rename(VALUE Var,VALUE var_new_name)
|
1783
|
+
{
|
1784
|
+
int ncid;
|
1785
|
+
int status;
|
1786
|
+
int varid;
|
1787
|
+
char *c_var_new_name;
|
1788
|
+
struct NetCDFVar *Netcdf_var;
|
1789
|
+
|
1790
|
+
rb_secure(4);
|
1791
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1792
|
+
ncid=Netcdf_var->ncid;
|
1793
|
+
varid=Netcdf_var->varid;
|
1794
|
+
|
1795
|
+
Check_Type(var_new_name,T_STRING);
|
1796
|
+
c_var_new_name=StringValueCStr(var_new_name);
|
1797
|
+
|
1798
|
+
status = nc_rename_var(ncid,varid,c_var_new_name);
|
1799
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
1800
|
+
|
1801
|
+
return Qnil;
|
1802
|
+
}
|
1803
|
+
|
1804
|
+
VALUE
|
1805
|
+
NetCDF_var_att(VALUE Var,VALUE att_name)
|
1806
|
+
{
|
1807
|
+
int ncid;
|
1808
|
+
int status;
|
1809
|
+
int varid;
|
1810
|
+
char *c_att_name;
|
1811
|
+
int c_attnump;
|
1812
|
+
struct NetCDFVar *Netcdf_var;
|
1813
|
+
struct NetCDFAtt *Netcdf_att;
|
1814
|
+
VALUE Att;
|
1815
|
+
|
1816
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1817
|
+
|
1818
|
+
ncid=Netcdf_var->ncid;
|
1819
|
+
varid=Netcdf_var->varid;
|
1820
|
+
|
1821
|
+
Check_Type(att_name,T_STRING);
|
1822
|
+
c_att_name=StringValueCStr(att_name);
|
1823
|
+
|
1824
|
+
status = nc_inq_attid(ncid,varid,c_att_name,&c_attnump);
|
1825
|
+
if(status == NC_NOERR){
|
1826
|
+
Netcdf_att=NetCDF_att_init(ncid,varid,c_att_name);
|
1827
|
+
Att=Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,Netcdf_att);
|
1828
|
+
return Att;
|
1829
|
+
}
|
1830
|
+
else if(status == NC_ENOTATT){
|
1831
|
+
return Qnil;
|
1832
|
+
}
|
1833
|
+
else{
|
1834
|
+
NC_RAISE(status);
|
1835
|
+
return Qnil;
|
1836
|
+
}
|
1837
|
+
}
|
1838
|
+
|
1839
|
+
/* Redifinition of the "==" and "eql?" methods */
|
1840
|
+
|
1841
|
+
VALUE
|
1842
|
+
NetCDF_eql(VALUE filea,VALUE fileb)
|
1843
|
+
{
|
1844
|
+
struct Netcdf *ncfilea;
|
1845
|
+
struct Netcdf *ncfileb;
|
1846
|
+
|
1847
|
+
if( rb_obj_is_kind_of(fileb, cNetCDF) ){
|
1848
|
+
Data_Get_Struct(filea,struct Netcdf,ncfilea);
|
1849
|
+
Data_Get_Struct(fileb,struct Netcdf,ncfileb);
|
1850
|
+
|
1851
|
+
if(ncfilea->ncid == ncfileb->ncid &&
|
1852
|
+
strcmp(ncfilea->name,ncfileb->name)==0){
|
1853
|
+
return Qtrue;
|
1854
|
+
} else {
|
1855
|
+
return Qfalse;
|
1856
|
+
}
|
1857
|
+
} else {
|
1858
|
+
return Qfalse;
|
1859
|
+
}
|
1860
|
+
}
|
1861
|
+
|
1862
|
+
VALUE
|
1863
|
+
NetCDF_var_eql(VALUE Vara,VALUE Varb)
|
1864
|
+
{
|
1865
|
+
struct NetCDFVar *Netcdf_vara;
|
1866
|
+
struct NetCDFVar *Netcdf_varb;
|
1867
|
+
|
1868
|
+
if( rb_obj_is_kind_of(Varb, cNetCDFVar) ){
|
1869
|
+
Data_Get_Struct(Vara,struct NetCDFVar,Netcdf_vara);
|
1870
|
+
Data_Get_Struct(Varb,struct NetCDFVar,Netcdf_varb);
|
1871
|
+
|
1872
|
+
if(Netcdf_vara->ncid == Netcdf_varb->ncid &&
|
1873
|
+
Netcdf_vara->varid == Netcdf_varb->varid){
|
1874
|
+
return Qtrue;
|
1875
|
+
} else {
|
1876
|
+
return Qfalse;
|
1877
|
+
}
|
1878
|
+
} else {
|
1879
|
+
return Qfalse;
|
1880
|
+
}
|
1881
|
+
}
|
1882
|
+
|
1883
|
+
VALUE
|
1884
|
+
NetCDF_dim_eql(VALUE Dima,VALUE Dimb)
|
1885
|
+
{
|
1886
|
+
struct NetCDFDim *Netcdf_dima;
|
1887
|
+
struct NetCDFDim *Netcdf_dimb;
|
1888
|
+
|
1889
|
+
if( rb_obj_is_kind_of(Dimb, cNetCDFDim) ){
|
1890
|
+
Data_Get_Struct(Dima,struct NetCDFDim,Netcdf_dima);
|
1891
|
+
Data_Get_Struct(Dimb,struct NetCDFDim,Netcdf_dimb);
|
1892
|
+
|
1893
|
+
if(Netcdf_dima->ncid == Netcdf_dimb->ncid &&
|
1894
|
+
Netcdf_dima->dimid == Netcdf_dimb->dimid){
|
1895
|
+
return Qtrue;
|
1896
|
+
} else {
|
1897
|
+
return Qfalse;
|
1898
|
+
}
|
1899
|
+
} else {
|
1900
|
+
return Qfalse;
|
1901
|
+
}
|
1902
|
+
}
|
1903
|
+
|
1904
|
+
VALUE
|
1905
|
+
NetCDF_att_eql(VALUE Atta,VALUE Attb)
|
1906
|
+
{
|
1907
|
+
struct NetCDFAtt *Netcdf_atta;
|
1908
|
+
struct NetCDFAtt *Netcdf_attb;
|
1909
|
+
|
1910
|
+
if( rb_obj_is_kind_of(Attb, cNetCDFAtt) ){
|
1911
|
+
Data_Get_Struct(Atta,struct NetCDFAtt,Netcdf_atta);
|
1912
|
+
Data_Get_Struct(Attb,struct NetCDFAtt,Netcdf_attb);
|
1913
|
+
|
1914
|
+
if(Netcdf_atta->ncid == Netcdf_atta->ncid &&
|
1915
|
+
Netcdf_atta->varid == Netcdf_attb->varid &&
|
1916
|
+
strcmp(Netcdf_atta->name,Netcdf_attb->name)==0){
|
1917
|
+
return Qtrue;
|
1918
|
+
} else {
|
1919
|
+
return Qfalse;
|
1920
|
+
}
|
1921
|
+
} else {
|
1922
|
+
return Qfalse;
|
1923
|
+
}
|
1924
|
+
}
|
1925
|
+
|
1926
|
+
/* Follow methods is to connect "NArray" with "Netcdf" */
|
1927
|
+
VALUE
|
1928
|
+
NetCDF_get_var_char(VALUE Var)
|
1929
|
+
{
|
1930
|
+
int ncid;
|
1931
|
+
int varid;
|
1932
|
+
int status;
|
1933
|
+
unsigned char *ptr;
|
1934
|
+
struct NetCDFVar *Netcdf_var;
|
1935
|
+
int i=0;
|
1936
|
+
int ndimsp;
|
1937
|
+
int *dimids;
|
1938
|
+
size_t lengthp;
|
1939
|
+
int *shape; /* NArray uses int instead of size_t */
|
1940
|
+
VALUE NArray;
|
1941
|
+
|
1942
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1943
|
+
ncid = Netcdf_var->ncid;
|
1944
|
+
varid = Netcdf_var->varid;
|
1945
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
1946
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1947
|
+
dimids = ALLOCA_N(int,ndimsp);
|
1948
|
+
if (ndimsp != 0){
|
1949
|
+
shape = ALLOCA_N(int,ndimsp);
|
1950
|
+
for(i=0;i<ndimsp;i++){
|
1951
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
1952
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1953
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
1954
|
+
shape[ndimsp-1-i]=lengthp;
|
1955
|
+
}
|
1956
|
+
} else {
|
1957
|
+
ndimsp = 1;
|
1958
|
+
shape = ALLOCA_N(int,1);
|
1959
|
+
shape[0]=1;
|
1960
|
+
}
|
1961
|
+
|
1962
|
+
Cbyte_to_NArray(NArray,ndimsp,shape,ptr);
|
1963
|
+
|
1964
|
+
status = nc_get_var_text(ncid,varid,(char *)ptr);
|
1965
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1966
|
+
|
1967
|
+
OBJ_TAINT(NArray);
|
1968
|
+
return NArray;
|
1969
|
+
}
|
1970
|
+
|
1971
|
+
VALUE
|
1972
|
+
NetCDF_get_var_byte(VALUE Var)
|
1973
|
+
{
|
1974
|
+
int ncid;
|
1975
|
+
int varid;
|
1976
|
+
int status;
|
1977
|
+
unsigned char *ptr;
|
1978
|
+
struct NetCDFVar *Netcdf_var;
|
1979
|
+
int i=0;
|
1980
|
+
int ndimsp;
|
1981
|
+
int *dimids;
|
1982
|
+
size_t lengthp;
|
1983
|
+
int *shape; /* NArray uses int instead of size_t */
|
1984
|
+
VALUE NArray;
|
1985
|
+
|
1986
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
1987
|
+
ncid = Netcdf_var->ncid;
|
1988
|
+
varid = Netcdf_var->varid;
|
1989
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
1990
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1991
|
+
dimids = ALLOCA_N(int,ndimsp);
|
1992
|
+
if (ndimsp != 0){
|
1993
|
+
shape = ALLOCA_N(int,ndimsp);
|
1994
|
+
for(i=0;i<ndimsp;i++){
|
1995
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
1996
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
1997
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
1998
|
+
shape[ndimsp-1-i]=lengthp;
|
1999
|
+
}
|
2000
|
+
} else {
|
2001
|
+
ndimsp = 1;
|
2002
|
+
shape = ALLOCA_N(int,1);
|
2003
|
+
shape[0]=1;
|
2004
|
+
}
|
2005
|
+
|
2006
|
+
Cbyte_to_NArray(NArray,ndimsp,shape,ptr);
|
2007
|
+
|
2008
|
+
status = nc_get_var_uchar(ncid,varid,ptr);
|
2009
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2010
|
+
|
2011
|
+
OBJ_TAINT(NArray);
|
2012
|
+
return NArray;
|
2013
|
+
}
|
2014
|
+
|
2015
|
+
VALUE
|
2016
|
+
NetCDF_get_var_sint(VALUE Var)
|
2017
|
+
{
|
2018
|
+
int ncid;
|
2019
|
+
int varid;
|
2020
|
+
int status;
|
2021
|
+
short *ptr;
|
2022
|
+
struct NetCDFVar *Netcdf_var;
|
2023
|
+
int i=0;
|
2024
|
+
int ndimsp;
|
2025
|
+
int *dimids;
|
2026
|
+
size_t lengthp;
|
2027
|
+
int *shape; /* NArray uses int instead of size_t */
|
2028
|
+
VALUE NArray;
|
2029
|
+
|
2030
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2031
|
+
ncid = Netcdf_var->ncid;
|
2032
|
+
varid = Netcdf_var->varid;
|
2033
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
2034
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2035
|
+
dimids = ALLOCA_N(int,ndimsp);
|
2036
|
+
if (ndimsp != 0){
|
2037
|
+
shape = ALLOCA_N(int,ndimsp);
|
2038
|
+
for(i=0;i<ndimsp;i++){
|
2039
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2040
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2041
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
2042
|
+
shape[ndimsp-1-i]=lengthp;
|
2043
|
+
}
|
2044
|
+
} else {
|
2045
|
+
ndimsp = 1;
|
2046
|
+
shape = ALLOCA_N(int,1);
|
2047
|
+
shape[0]=1;
|
2048
|
+
}
|
2049
|
+
|
2050
|
+
Csint_to_NArray(NArray,ndimsp,shape,ptr);
|
2051
|
+
|
2052
|
+
status = nc_get_var_short(ncid,varid,ptr);
|
2053
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2054
|
+
|
2055
|
+
OBJ_TAINT(NArray);
|
2056
|
+
return NArray;
|
2057
|
+
}
|
2058
|
+
|
2059
|
+
VALUE
|
2060
|
+
NetCDF_get_var_int(VALUE Var)
|
2061
|
+
{
|
2062
|
+
int ncid;
|
2063
|
+
int varid;
|
2064
|
+
int status;
|
2065
|
+
int *ptr;
|
2066
|
+
struct NetCDFVar *Netcdf_var;
|
2067
|
+
int i=0;
|
2068
|
+
int ndimsp;
|
2069
|
+
int *dimids;
|
2070
|
+
size_t lengthp;
|
2071
|
+
int *shape; /* NArray uses int instead of size_t */
|
2072
|
+
VALUE NArray;
|
2073
|
+
|
2074
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2075
|
+
ncid = Netcdf_var->ncid;
|
2076
|
+
varid = Netcdf_var->varid;
|
2077
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
2078
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2079
|
+
dimids = ALLOCA_N(int,ndimsp);
|
2080
|
+
if (ndimsp != 0){
|
2081
|
+
shape = ALLOCA_N(int,ndimsp);
|
2082
|
+
for(i=0;i<ndimsp;i++){
|
2083
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2084
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2085
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
2086
|
+
shape[ndimsp-1-i]=lengthp;
|
2087
|
+
}
|
2088
|
+
} else {
|
2089
|
+
ndimsp = 1;
|
2090
|
+
shape = ALLOCA_N(int,1);
|
2091
|
+
shape[0]=1;
|
2092
|
+
}
|
2093
|
+
|
2094
|
+
Clint_to_NArray(NArray,ndimsp,shape,ptr);
|
2095
|
+
|
2096
|
+
status = nc_get_var_int(ncid,varid,ptr);
|
2097
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2098
|
+
|
2099
|
+
OBJ_TAINT(NArray);
|
2100
|
+
return NArray;
|
2101
|
+
}
|
2102
|
+
|
2103
|
+
VALUE
|
2104
|
+
NetCDF_get_var_float(VALUE Var)
|
2105
|
+
{
|
2106
|
+
int ncid;
|
2107
|
+
int varid;
|
2108
|
+
int status;
|
2109
|
+
float *ptr;
|
2110
|
+
struct NetCDFVar *Netcdf_var;
|
2111
|
+
int i=0;
|
2112
|
+
int ndimsp;
|
2113
|
+
int *dimids;
|
2114
|
+
size_t lengthp;
|
2115
|
+
int *shape; /* NArray uses int instead of size_t */
|
2116
|
+
VALUE NArray;
|
2117
|
+
|
2118
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2119
|
+
ncid = Netcdf_var->ncid;
|
2120
|
+
varid = Netcdf_var->varid;
|
2121
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
2122
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2123
|
+
dimids = ALLOCA_N(int,ndimsp);
|
2124
|
+
if (ndimsp != 0){
|
2125
|
+
shape = ALLOCA_N(int,ndimsp);
|
2126
|
+
for(i=0;i<ndimsp;i++){
|
2127
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2128
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2129
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
2130
|
+
shape[ndimsp-1-i]=lengthp;
|
2131
|
+
}
|
2132
|
+
} else {
|
2133
|
+
ndimsp = 1;
|
2134
|
+
shape = ALLOCA_N(int,1);
|
2135
|
+
shape[0]=1;
|
2136
|
+
}
|
2137
|
+
|
2138
|
+
Cfloat_to_NArray(NArray,ndimsp,shape,ptr);
|
2139
|
+
|
2140
|
+
status = nc_get_var_float(ncid,varid,ptr);
|
2141
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2142
|
+
|
2143
|
+
OBJ_TAINT(NArray);
|
2144
|
+
return NArray;
|
2145
|
+
}
|
2146
|
+
|
2147
|
+
VALUE
|
2148
|
+
NetCDF_get_var_double(VALUE Var)
|
2149
|
+
{
|
2150
|
+
int ncid;
|
2151
|
+
int varid;
|
2152
|
+
int status;
|
2153
|
+
double *ptr;
|
2154
|
+
struct NetCDFVar *Netcdf_var;
|
2155
|
+
int i=0;
|
2156
|
+
int ndimsp;
|
2157
|
+
int *dimids;
|
2158
|
+
size_t lengthp;
|
2159
|
+
int *shape; /* NArray uses int instead of size_t */
|
2160
|
+
VALUE NArray;
|
2161
|
+
|
2162
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2163
|
+
ncid = Netcdf_var->ncid;
|
2164
|
+
varid = Netcdf_var->varid;
|
2165
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
2166
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2167
|
+
dimids = ALLOCA_N(int,ndimsp);
|
2168
|
+
if (ndimsp != 0){
|
2169
|
+
shape = ALLOCA_N(int,ndimsp);
|
2170
|
+
for(i=0;i<ndimsp;i++){
|
2171
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2172
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2173
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
2174
|
+
shape[ndimsp-1-i]=lengthp;
|
2175
|
+
}
|
2176
|
+
} else {
|
2177
|
+
ndimsp = 1;
|
2178
|
+
shape = ALLOCA_N(int,1);
|
2179
|
+
shape[0]=1;
|
2180
|
+
}
|
2181
|
+
|
2182
|
+
Cdouble_to_NArray(NArray,ndimsp,shape,ptr);
|
2183
|
+
|
2184
|
+
status = nc_get_var_double(ncid,varid,ptr);
|
2185
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2186
|
+
|
2187
|
+
OBJ_TAINT(NArray);
|
2188
|
+
return NArray;
|
2189
|
+
}
|
2190
|
+
|
2191
|
+
VALUE
|
2192
|
+
NetCDF_get_var1_char(VALUE Var,VALUE start)
|
2193
|
+
{
|
2194
|
+
int ncid;
|
2195
|
+
int varid;
|
2196
|
+
int status;
|
2197
|
+
unsigned char *ptr;
|
2198
|
+
int i;
|
2199
|
+
struct NetCDFVar *Netcdf_var;
|
2200
|
+
long l_start;
|
2201
|
+
size_t *c_start;
|
2202
|
+
int ndims;
|
2203
|
+
int dimids[NC_MAX_DIMS];
|
2204
|
+
size_t dimlen;
|
2205
|
+
int *c_count;
|
2206
|
+
int nc_tlen=0;
|
2207
|
+
VALUE NArray;
|
2208
|
+
|
2209
|
+
|
2210
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2211
|
+
ncid = Netcdf_var->ncid;
|
2212
|
+
varid = Netcdf_var->varid;
|
2213
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
2214
|
+
if(status != NC_NOERR)NC_RAISE(status);
|
2215
|
+
if(ndims == 0) {
|
2216
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2217
|
+
}
|
2218
|
+
|
2219
|
+
Check_Type(start,T_ARRAY);
|
2220
|
+
if(RARRAY_LEN(start) < ndims) {
|
2221
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
2222
|
+
}
|
2223
|
+
|
2224
|
+
c_start=ALLOCA_N(size_t,ndims);
|
2225
|
+
c_count=ALLOCA_N(int,ndims);
|
2226
|
+
for(i=0;i<ndims;i++){
|
2227
|
+
l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2228
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2229
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2230
|
+
if(l_start < 0) {
|
2231
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2232
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2233
|
+
l_start += dimlen;
|
2234
|
+
}
|
2235
|
+
c_start[i]=l_start;
|
2236
|
+
|
2237
|
+
c_count[i]=1;
|
2238
|
+
nc_tlen = 1+nc_tlen;
|
2239
|
+
}
|
2240
|
+
|
2241
|
+
|
2242
|
+
|
2243
|
+
|
2244
|
+
Cbyte_to_NArray(NArray,ndims,c_count,ptr);
|
2245
|
+
status = nc_get_var1_text(ncid,varid,c_start,(char *)ptr);
|
2246
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2247
|
+
|
2248
|
+
OBJ_TAINT(NArray);
|
2249
|
+
return NArray;
|
2250
|
+
|
2251
|
+
}
|
2252
|
+
|
2253
|
+
VALUE
|
2254
|
+
NetCDF_get_var1_byte(VALUE Var,VALUE start)
|
2255
|
+
{
|
2256
|
+
int ncid;
|
2257
|
+
int varid;
|
2258
|
+
int status;
|
2259
|
+
unsigned char *ptr;
|
2260
|
+
int i;
|
2261
|
+
struct NetCDFVar *Netcdf_var;
|
2262
|
+
long l_start;
|
2263
|
+
size_t *c_start;
|
2264
|
+
int ndims;
|
2265
|
+
int dimids[NC_MAX_DIMS];
|
2266
|
+
size_t dimlen;
|
2267
|
+
int *c_count;
|
2268
|
+
int nc_tlen=0;
|
2269
|
+
VALUE NArray;
|
2270
|
+
|
2271
|
+
|
2272
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2273
|
+
ncid = Netcdf_var->ncid;
|
2274
|
+
varid = Netcdf_var->varid;
|
2275
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
2276
|
+
if(status != NC_NOERR)NC_RAISE(status);
|
2277
|
+
if(ndims == 0) {
|
2278
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2279
|
+
}
|
2280
|
+
|
2281
|
+
Check_Type(start,T_ARRAY);
|
2282
|
+
if(RARRAY_LEN(start) < ndims) {
|
2283
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
2284
|
+
}
|
2285
|
+
|
2286
|
+
c_start=ALLOCA_N(size_t,ndims);
|
2287
|
+
c_count=ALLOCA_N(int,ndims);
|
2288
|
+
for(i=0;i<ndims;i++){
|
2289
|
+
l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2290
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2291
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2292
|
+
if(l_start < 0) {
|
2293
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2294
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2295
|
+
l_start += dimlen;
|
2296
|
+
}
|
2297
|
+
c_start[i]=l_start;
|
2298
|
+
|
2299
|
+
c_count[i]=1;
|
2300
|
+
nc_tlen = 1+nc_tlen;
|
2301
|
+
}
|
2302
|
+
|
2303
|
+
|
2304
|
+
|
2305
|
+
|
2306
|
+
Cbyte_to_NArray(NArray,ndims,c_count,ptr);
|
2307
|
+
status = nc_get_var1_uchar(ncid,varid,c_start,ptr);
|
2308
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2309
|
+
|
2310
|
+
OBJ_TAINT(NArray);
|
2311
|
+
return NArray;
|
2312
|
+
|
2313
|
+
}
|
2314
|
+
|
2315
|
+
VALUE
|
2316
|
+
NetCDF_get_var1_sint(VALUE Var,VALUE start)
|
2317
|
+
{
|
2318
|
+
int ncid;
|
2319
|
+
int varid;
|
2320
|
+
int status;
|
2321
|
+
short *ptr;
|
2322
|
+
int i;
|
2323
|
+
struct NetCDFVar *Netcdf_var;
|
2324
|
+
long l_start;
|
2325
|
+
size_t *c_start;
|
2326
|
+
int ndims;
|
2327
|
+
int dimids[NC_MAX_DIMS];
|
2328
|
+
size_t dimlen;
|
2329
|
+
int *c_count;
|
2330
|
+
int nc_tlen=0;
|
2331
|
+
VALUE NArray;
|
2332
|
+
|
2333
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2334
|
+
ncid = Netcdf_var->ncid;
|
2335
|
+
varid = Netcdf_var->varid;
|
2336
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
2337
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2338
|
+
if(ndims == 0) {
|
2339
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2340
|
+
}
|
2341
|
+
|
2342
|
+
Check_Type(start,T_ARRAY);
|
2343
|
+
if(RARRAY_LEN(start) < ndims) {
|
2344
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
2345
|
+
}
|
2346
|
+
|
2347
|
+
c_start=ALLOCA_N(size_t,ndims);
|
2348
|
+
c_count=ALLOCA_N(int,ndims);
|
2349
|
+
for(i=0;i<ndims;i++){
|
2350
|
+
l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2351
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2352
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2353
|
+
if(l_start < 0) {
|
2354
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2355
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2356
|
+
l_start += dimlen;
|
2357
|
+
}
|
2358
|
+
c_start[i]=l_start;
|
2359
|
+
c_count[i]=1;
|
2360
|
+
nc_tlen = nc_tlen+1;
|
2361
|
+
}
|
2362
|
+
|
2363
|
+
Csint_to_NArray(NArray,ndims,c_count,ptr);
|
2364
|
+
|
2365
|
+
status = nc_get_var1_short(ncid,varid,c_start,ptr);
|
2366
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2367
|
+
|
2368
|
+
OBJ_TAINT(NArray);
|
2369
|
+
return NArray;
|
2370
|
+
|
2371
|
+
}
|
2372
|
+
|
2373
|
+
VALUE
|
2374
|
+
NetCDF_get_var1_int(VALUE Var,VALUE start)
|
2375
|
+
{
|
2376
|
+
int ncid;
|
2377
|
+
int varid;
|
2378
|
+
int status;
|
2379
|
+
int *ptr;
|
2380
|
+
int i;
|
2381
|
+
struct NetCDFVar *Netcdf_var;
|
2382
|
+
long l_start;
|
2383
|
+
size_t *c_start;
|
2384
|
+
int ndims;
|
2385
|
+
int dimids[NC_MAX_DIMS];
|
2386
|
+
size_t dimlen;
|
2387
|
+
int *c_count;
|
2388
|
+
int nc_tlen=0;
|
2389
|
+
VALUE NArray;
|
2390
|
+
|
2391
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2392
|
+
ncid = Netcdf_var->ncid;
|
2393
|
+
varid = Netcdf_var->varid;
|
2394
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
2395
|
+
if(status != NC_NOERR)NC_RAISE(status);
|
2396
|
+
if(ndims == 0) {
|
2397
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2398
|
+
}
|
2399
|
+
|
2400
|
+
Check_Type(start,T_ARRAY);
|
2401
|
+
if(RARRAY_LEN(start) < ndims) {
|
2402
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
2403
|
+
}
|
2404
|
+
|
2405
|
+
c_start=ALLOCA_N(size_t,ndims);
|
2406
|
+
c_count=ALLOCA_N(int,ndims);
|
2407
|
+
for(i=0;i<ndims;i++){
|
2408
|
+
l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2409
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2410
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2411
|
+
if(l_start < 0) {
|
2412
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2413
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2414
|
+
l_start += dimlen;
|
2415
|
+
}
|
2416
|
+
c_start[i]=l_start;
|
2417
|
+
c_count[i]=1;
|
2418
|
+
nc_tlen= nc_tlen+1;
|
2419
|
+
}
|
2420
|
+
|
2421
|
+
Clint_to_NArray(NArray,ndims,c_count,ptr);
|
2422
|
+
|
2423
|
+
status = nc_get_var1_int(ncid,varid,c_start,ptr);
|
2424
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2425
|
+
|
2426
|
+
OBJ_TAINT(NArray);
|
2427
|
+
return NArray;
|
2428
|
+
|
2429
|
+
}
|
2430
|
+
|
2431
|
+
VALUE
|
2432
|
+
NetCDF_get_var1_float(VALUE Var,VALUE start)
|
2433
|
+
{
|
2434
|
+
int ncid;
|
2435
|
+
int varid;
|
2436
|
+
int status;
|
2437
|
+
float *ptr;
|
2438
|
+
int i;
|
2439
|
+
struct NetCDFVar *Netcdf_var;
|
2440
|
+
long l_start;
|
2441
|
+
size_t *c_start;
|
2442
|
+
int ndims;
|
2443
|
+
int dimids[NC_MAX_DIMS];
|
2444
|
+
size_t dimlen;
|
2445
|
+
int *c_count;
|
2446
|
+
int nc_tlen=0;
|
2447
|
+
VALUE NArray;
|
2448
|
+
|
2449
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2450
|
+
ncid = Netcdf_var->ncid;
|
2451
|
+
varid = Netcdf_var->varid;
|
2452
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
2453
|
+
if(status != NC_NOERR)NC_RAISE(status);
|
2454
|
+
if(ndims == 0) {
|
2455
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2456
|
+
}
|
2457
|
+
|
2458
|
+
Check_Type(start,T_ARRAY);
|
2459
|
+
if(RARRAY_LEN(start) < ndims) {
|
2460
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
2461
|
+
}
|
2462
|
+
|
2463
|
+
c_start=ALLOCA_N(size_t,ndims);
|
2464
|
+
c_count=ALLOCA_N(int,ndims);
|
2465
|
+
for(i=0;i<ndims;i++){
|
2466
|
+
l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2467
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
2468
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2469
|
+
if(l_start < 0) {
|
2470
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2471
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2472
|
+
l_start += dimlen;
|
2473
|
+
}
|
2474
|
+
c_start[i]=l_start;
|
2475
|
+
c_count[i]=1;
|
2476
|
+
nc_tlen = nc_tlen+1;
|
2477
|
+
}
|
2478
|
+
|
2479
|
+
Cfloat_to_NArray(NArray,ndims,c_count,ptr);
|
2480
|
+
|
2481
|
+
status = nc_get_var1_float(ncid,varid,c_start,ptr);
|
2482
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2483
|
+
|
2484
|
+
OBJ_TAINT(NArray);
|
2485
|
+
return NArray;
|
2486
|
+
|
2487
|
+
}
|
2488
|
+
|
2489
|
+
VALUE
|
2490
|
+
NetCDF_get_var1_double(VALUE Var,VALUE start)
|
2491
|
+
{
|
2492
|
+
int ncid;
|
2493
|
+
int varid;
|
2494
|
+
int status;
|
2495
|
+
double *ptr;
|
2496
|
+
int i;
|
2497
|
+
struct NetCDFVar *Netcdf_var;
|
2498
|
+
long l_start;
|
2499
|
+
size_t *c_start;
|
2500
|
+
int ndims;
|
2501
|
+
int dimids[NC_MAX_DIMS];
|
2502
|
+
size_t dimlen;
|
2503
|
+
int *c_count;
|
2504
|
+
int nc_tlen=0;
|
2505
|
+
VALUE NArray;
|
2506
|
+
|
2507
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2508
|
+
ncid = Netcdf_var->ncid;
|
2509
|
+
varid = Netcdf_var->varid;
|
2510
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
2511
|
+
if(status != NC_NOERR)NC_RAISE(status);
|
2512
|
+
if(ndims == 0) {
|
2513
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2514
|
+
}
|
2515
|
+
|
2516
|
+
Check_Type(start,T_ARRAY);
|
2517
|
+
if(RARRAY_LEN(start) < ndims) {
|
2518
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
2519
|
+
}
|
2520
|
+
|
2521
|
+
c_start=ALLOCA_N(size_t,ndims);
|
2522
|
+
c_count=ALLOCA_N(int,ndims);
|
2523
|
+
for(i=0;i<ndims;i++){
|
2524
|
+
l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2525
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2526
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
2527
|
+
if(l_start < 0) {
|
2528
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2529
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2530
|
+
l_start += dimlen;
|
2531
|
+
}
|
2532
|
+
c_start[i]=l_start;
|
2533
|
+
c_count[i]=1;
|
2534
|
+
nc_tlen = nc_tlen+1;
|
2535
|
+
}
|
2536
|
+
|
2537
|
+
Cdouble_to_NArray(NArray,ndims,c_count,ptr);
|
2538
|
+
|
2539
|
+
status = nc_get_var1_double(ncid,varid,c_start,ptr);
|
2540
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2541
|
+
|
2542
|
+
OBJ_TAINT(NArray);
|
2543
|
+
return NArray;
|
2544
|
+
|
2545
|
+
}
|
2546
|
+
|
2547
|
+
VALUE
|
2548
|
+
NetCDF_get_vars_char(VALUE Var,VALUE start,VALUE end,VALUE stride)
|
2549
|
+
{
|
2550
|
+
int ncid;
|
2551
|
+
int varid;
|
2552
|
+
int status;
|
2553
|
+
unsigned char *ptr;
|
2554
|
+
int i;
|
2555
|
+
struct NetCDFVar *Netcdf_var;
|
2556
|
+
long l_start, l_end;
|
2557
|
+
size_t *c_start;
|
2558
|
+
size_t *c_count;
|
2559
|
+
ptrdiff_t *c_stride;
|
2560
|
+
int *shape; /* NArray uses int instead of size_t */
|
2561
|
+
int ndims;
|
2562
|
+
int *dimids;
|
2563
|
+
int nc_tlen=1;
|
2564
|
+
size_t dimlen;
|
2565
|
+
VALUE NArray;
|
2566
|
+
|
2567
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2568
|
+
ncid = Netcdf_var->ncid;
|
2569
|
+
varid = Netcdf_var->varid;
|
2570
|
+
|
2571
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
2572
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2573
|
+
if(ndims == 0) {
|
2574
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2575
|
+
}
|
2576
|
+
|
2577
|
+
dimids = ALLOCA_N(int,ndims);
|
2578
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2579
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2580
|
+
|
2581
|
+
Check_Type(start,T_ARRAY);
|
2582
|
+
if(RARRAY_LEN(start) < ndims){
|
2583
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
2584
|
+
}
|
2585
|
+
c_start = ALLOCA_N(size_t,ndims);
|
2586
|
+
for(i=0; i<ndims; i++){
|
2587
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2588
|
+
|
2589
|
+
if(l_start < 0) {
|
2590
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
2591
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2592
|
+
l_start += dimlen;
|
2593
|
+
}
|
2594
|
+
c_start[i]=l_start;
|
2595
|
+
}
|
2596
|
+
|
2597
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
2598
|
+
switch(TYPE(stride)){
|
2599
|
+
case T_NIL:
|
2600
|
+
for(i=0; i<ndims; i++){
|
2601
|
+
c_stride[i]=1;
|
2602
|
+
}
|
2603
|
+
break;
|
2604
|
+
default:
|
2605
|
+
Check_Type(stride,T_ARRAY);
|
2606
|
+
if(RARRAY_LEN(stride) < ndims) {
|
2607
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
|
2608
|
+
}
|
2609
|
+
for(i=0;i<ndims; i++){
|
2610
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
2611
|
+
if(c_stride[i]==0){
|
2612
|
+
rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
|
2613
|
+
}
|
2614
|
+
}
|
2615
|
+
}
|
2616
|
+
|
2617
|
+
c_count=ALLOCA_N(size_t,ndims);
|
2618
|
+
switch(TYPE(end)){
|
2619
|
+
case T_NIL:
|
2620
|
+
for(i=0; i<ndims; i++){
|
2621
|
+
nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2622
|
+
c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
|
2623
|
+
}
|
2624
|
+
break;
|
2625
|
+
default:
|
2626
|
+
Check_Type(end,T_ARRAY);
|
2627
|
+
if(RARRAY_LEN(end) <ndims) {
|
2628
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
2629
|
+
}
|
2630
|
+
for(i=0; i<ndims; i++){
|
2631
|
+
l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
2632
|
+
if(l_end < 0) {
|
2633
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2634
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2635
|
+
l_end +=dimlen;
|
2636
|
+
}
|
2637
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
2638
|
+
}
|
2639
|
+
}
|
2640
|
+
for(i=0;i<ndims;i++){
|
2641
|
+
nc_tlen = nc_tlen*c_count[i];
|
2642
|
+
}
|
2643
|
+
|
2644
|
+
|
2645
|
+
shape = ALLOCA_N(int,ndims);
|
2646
|
+
for(i=0;i<ndims;i++){
|
2647
|
+
shape[ndims-1-i]=c_count[i];
|
2648
|
+
}
|
2649
|
+
|
2650
|
+
Cbyte_to_NArray(NArray,ndims,shape,ptr);
|
2651
|
+
|
2652
|
+
status = nc_get_vars_text(ncid,varid,c_start,c_count,c_stride,(char *)ptr);
|
2653
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2654
|
+
|
2655
|
+
OBJ_TAINT(NArray);
|
2656
|
+
return NArray;
|
2657
|
+
}
|
2658
|
+
|
2659
|
+
VALUE
|
2660
|
+
NetCDF_get_vars_byte(VALUE Var,VALUE start,VALUE end,VALUE stride)
|
2661
|
+
{
|
2662
|
+
int ncid;
|
2663
|
+
int varid;
|
2664
|
+
int status;
|
2665
|
+
unsigned char *ptr;
|
2666
|
+
int i;
|
2667
|
+
struct NetCDFVar *Netcdf_var;
|
2668
|
+
long l_start, l_end;
|
2669
|
+
size_t *c_start;
|
2670
|
+
size_t *c_count;
|
2671
|
+
ptrdiff_t *c_stride;
|
2672
|
+
int *shape; /* NArray uses int instead of size_t */
|
2673
|
+
int ndims;
|
2674
|
+
int *dimids;
|
2675
|
+
int nc_tlen=1;
|
2676
|
+
size_t dimlen;
|
2677
|
+
VALUE NArray;
|
2678
|
+
|
2679
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2680
|
+
ncid = Netcdf_var->ncid;
|
2681
|
+
varid = Netcdf_var->varid;
|
2682
|
+
|
2683
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
2684
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2685
|
+
if(ndims == 0) {
|
2686
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2687
|
+
}
|
2688
|
+
|
2689
|
+
dimids = ALLOCA_N(int,ndims);
|
2690
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2691
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2692
|
+
|
2693
|
+
Check_Type(start,T_ARRAY);
|
2694
|
+
if(RARRAY_LEN(start) < ndims){
|
2695
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
2696
|
+
}
|
2697
|
+
c_start = ALLOCA_N(size_t,ndims);
|
2698
|
+
for(i=0; i<ndims; i++){
|
2699
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2700
|
+
|
2701
|
+
if(l_start < 0) {
|
2702
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
2703
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2704
|
+
l_start += dimlen;
|
2705
|
+
}
|
2706
|
+
c_start[i]=l_start;
|
2707
|
+
}
|
2708
|
+
|
2709
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
2710
|
+
switch(TYPE(stride)){
|
2711
|
+
case T_NIL:
|
2712
|
+
for(i=0; i<ndims; i++){
|
2713
|
+
c_stride[i]=1;
|
2714
|
+
}
|
2715
|
+
break;
|
2716
|
+
default:
|
2717
|
+
Check_Type(stride,T_ARRAY);
|
2718
|
+
if(RARRAY_LEN(stride) < ndims) {
|
2719
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
|
2720
|
+
}
|
2721
|
+
for(i=0;i<ndims; i++){
|
2722
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
2723
|
+
if(c_stride[i]==0){
|
2724
|
+
rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
|
2725
|
+
}
|
2726
|
+
}
|
2727
|
+
}
|
2728
|
+
|
2729
|
+
c_count=ALLOCA_N(size_t,ndims);
|
2730
|
+
switch(TYPE(end)){
|
2731
|
+
case T_NIL:
|
2732
|
+
for(i=0; i<ndims; i++){
|
2733
|
+
nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2734
|
+
c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
|
2735
|
+
}
|
2736
|
+
break;
|
2737
|
+
default:
|
2738
|
+
Check_Type(end,T_ARRAY);
|
2739
|
+
if(RARRAY_LEN(end) <ndims) {
|
2740
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
2741
|
+
}
|
2742
|
+
for(i=0; i<ndims; i++){
|
2743
|
+
l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
2744
|
+
if(l_end < 0) {
|
2745
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2746
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2747
|
+
l_end +=dimlen;
|
2748
|
+
}
|
2749
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
2750
|
+
}
|
2751
|
+
}
|
2752
|
+
for(i=0;i<ndims;i++){
|
2753
|
+
nc_tlen = nc_tlen*c_count[i];
|
2754
|
+
}
|
2755
|
+
|
2756
|
+
|
2757
|
+
shape = ALLOCA_N(int,ndims);
|
2758
|
+
for(i=0;i<ndims;i++){
|
2759
|
+
shape[ndims-1-i]=c_count[i];
|
2760
|
+
}
|
2761
|
+
|
2762
|
+
Cbyte_to_NArray(NArray,ndims,shape,ptr);
|
2763
|
+
|
2764
|
+
status = nc_get_vars_uchar(ncid,varid,c_start,c_count,c_stride,ptr);
|
2765
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2766
|
+
|
2767
|
+
OBJ_TAINT(NArray);
|
2768
|
+
return NArray;
|
2769
|
+
}
|
2770
|
+
|
2771
|
+
VALUE
|
2772
|
+
NetCDF_get_vars_sint(VALUE Var,VALUE start,VALUE end,VALUE stride)
|
2773
|
+
{
|
2774
|
+
int ncid;
|
2775
|
+
int varid;
|
2776
|
+
int status;
|
2777
|
+
short *ptr;
|
2778
|
+
int i;
|
2779
|
+
struct NetCDFVar *Netcdf_var;
|
2780
|
+
long l_start, l_end;
|
2781
|
+
size_t *c_start;
|
2782
|
+
size_t *c_count;
|
2783
|
+
ptrdiff_t *c_stride;
|
2784
|
+
int *shape; /* NArray uses int instead of size_t */
|
2785
|
+
int ndims;
|
2786
|
+
int *dimids;
|
2787
|
+
int nc_tlen=1;
|
2788
|
+
size_t dimlen;
|
2789
|
+
VALUE NArray;
|
2790
|
+
|
2791
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2792
|
+
ncid = Netcdf_var->ncid;
|
2793
|
+
varid = Netcdf_var->varid;
|
2794
|
+
|
2795
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
2796
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2797
|
+
if(ndims == 0) {
|
2798
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2799
|
+
}
|
2800
|
+
|
2801
|
+
dimids = ALLOCA_N(int,ndims);
|
2802
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2803
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2804
|
+
|
2805
|
+
Check_Type(start,T_ARRAY);
|
2806
|
+
if(RARRAY_LEN(start) < ndims){
|
2807
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
2808
|
+
}
|
2809
|
+
c_start = ALLOCA_N(size_t,ndims);
|
2810
|
+
for(i=0; i<ndims; i++){
|
2811
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2812
|
+
|
2813
|
+
if(l_start < 0) {
|
2814
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
2815
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2816
|
+
l_start += dimlen;
|
2817
|
+
}
|
2818
|
+
c_start[i]=l_start;
|
2819
|
+
}
|
2820
|
+
|
2821
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
2822
|
+
switch(TYPE(stride)){
|
2823
|
+
case T_NIL:
|
2824
|
+
for(i=0; i<ndims; i++){
|
2825
|
+
c_stride[i]=1;
|
2826
|
+
}
|
2827
|
+
break;
|
2828
|
+
default:
|
2829
|
+
Check_Type(stride,T_ARRAY);
|
2830
|
+
if(RARRAY_LEN(stride) < ndims) {
|
2831
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
|
2832
|
+
}
|
2833
|
+
for(i=0;i<ndims; i++){
|
2834
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
2835
|
+
if(c_stride[i]==0){
|
2836
|
+
rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
|
2837
|
+
}
|
2838
|
+
}
|
2839
|
+
}
|
2840
|
+
|
2841
|
+
c_count=ALLOCA_N(size_t,ndims);
|
2842
|
+
switch(TYPE(end)){
|
2843
|
+
case T_NIL:
|
2844
|
+
for(i=0; i<ndims; i++){
|
2845
|
+
nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2846
|
+
c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
|
2847
|
+
}
|
2848
|
+
break;
|
2849
|
+
default:
|
2850
|
+
Check_Type(end,T_ARRAY);
|
2851
|
+
if(RARRAY_LEN(end) <ndims) {
|
2852
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
2853
|
+
}
|
2854
|
+
for(i=0; i<ndims; i++){
|
2855
|
+
l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
2856
|
+
if(l_end < 0) {
|
2857
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2858
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2859
|
+
l_end +=dimlen;
|
2860
|
+
}
|
2861
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
2862
|
+
}
|
2863
|
+
}
|
2864
|
+
|
2865
|
+
for(i=0;i<ndims;i++){
|
2866
|
+
nc_tlen = nc_tlen*c_count[i];
|
2867
|
+
}
|
2868
|
+
|
2869
|
+
shape = ALLOCA_N(int,ndims);
|
2870
|
+
for(i=0;i<ndims;i++){
|
2871
|
+
shape[ndims-1-i]=c_count[i];
|
2872
|
+
}
|
2873
|
+
|
2874
|
+
Csint_to_NArray(NArray,ndims,shape,ptr);
|
2875
|
+
|
2876
|
+
|
2877
|
+
status = nc_get_vars_short(ncid,varid,c_start,c_count,c_stride,ptr);
|
2878
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2879
|
+
|
2880
|
+
OBJ_TAINT(NArray);
|
2881
|
+
return NArray;
|
2882
|
+
}
|
2883
|
+
|
2884
|
+
VALUE
|
2885
|
+
NetCDF_get_vars_int(VALUE Var,VALUE start,VALUE end,VALUE stride)
|
2886
|
+
{
|
2887
|
+
int ncid;
|
2888
|
+
int varid;
|
2889
|
+
int status;
|
2890
|
+
int *ptr;
|
2891
|
+
int i;
|
2892
|
+
struct NetCDFVar *Netcdf_var;
|
2893
|
+
long l_start, l_end;
|
2894
|
+
size_t *c_start;
|
2895
|
+
size_t *c_count;
|
2896
|
+
ptrdiff_t *c_stride;
|
2897
|
+
int *shape; /* NArray uses int instead of size_t */
|
2898
|
+
int ndims;
|
2899
|
+
int *dimids;
|
2900
|
+
int nc_tlen=1;
|
2901
|
+
size_t dimlen;
|
2902
|
+
VALUE NArray;
|
2903
|
+
|
2904
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
2905
|
+
ncid = Netcdf_var->ncid;
|
2906
|
+
varid = Netcdf_var->varid;
|
2907
|
+
|
2908
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
2909
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2910
|
+
if(ndims == 0) {
|
2911
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
2912
|
+
}
|
2913
|
+
|
2914
|
+
dimids = ALLOCA_N(int,ndims);
|
2915
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
2916
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2917
|
+
|
2918
|
+
Check_Type(start,T_ARRAY);
|
2919
|
+
if(RARRAY_LEN(start) < ndims){
|
2920
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
2921
|
+
}
|
2922
|
+
c_start = ALLOCA_N(size_t,ndims);
|
2923
|
+
for(i=0; i<ndims; i++){
|
2924
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
2925
|
+
|
2926
|
+
if(l_start < 0) {
|
2927
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
2928
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2929
|
+
l_start += dimlen;
|
2930
|
+
}
|
2931
|
+
c_start[i]=l_start;
|
2932
|
+
}
|
2933
|
+
|
2934
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
2935
|
+
switch(TYPE(stride)){
|
2936
|
+
case T_NIL:
|
2937
|
+
for(i=0; i<ndims; i++){
|
2938
|
+
c_stride[i]=1;
|
2939
|
+
}
|
2940
|
+
break;
|
2941
|
+
default:
|
2942
|
+
Check_Type(stride,T_ARRAY);
|
2943
|
+
if(RARRAY_LEN(stride) < ndims) {
|
2944
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
|
2945
|
+
}
|
2946
|
+
for(i=0;i<ndims; i++){
|
2947
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
2948
|
+
if(c_stride[i]==0){
|
2949
|
+
rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
|
2950
|
+
}
|
2951
|
+
}
|
2952
|
+
}
|
2953
|
+
|
2954
|
+
c_count=ALLOCA_N(size_t,ndims);
|
2955
|
+
switch(TYPE(end)){
|
2956
|
+
case T_NIL:
|
2957
|
+
for(i=0; i<ndims; i++){
|
2958
|
+
nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2959
|
+
c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
|
2960
|
+
}
|
2961
|
+
break;
|
2962
|
+
default:
|
2963
|
+
Check_Type(end,T_ARRAY);
|
2964
|
+
if(RARRAY_LEN(end) <ndims) {
|
2965
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
2966
|
+
}
|
2967
|
+
for(i=0; i<ndims; i++){
|
2968
|
+
l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
2969
|
+
if(l_end < 0) {
|
2970
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
2971
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2972
|
+
l_end +=dimlen;
|
2973
|
+
}
|
2974
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
2975
|
+
}
|
2976
|
+
}
|
2977
|
+
|
2978
|
+
for(i=0;i<ndims;i++){
|
2979
|
+
nc_tlen = nc_tlen*c_count[i];
|
2980
|
+
}
|
2981
|
+
|
2982
|
+
shape = ALLOCA_N(int,ndims);
|
2983
|
+
for(i=0;i<ndims;i++){
|
2984
|
+
shape[ndims-1-i]=c_count[i];
|
2985
|
+
}
|
2986
|
+
|
2987
|
+
Clint_to_NArray(NArray,ndims,shape,ptr);
|
2988
|
+
|
2989
|
+
|
2990
|
+
status = nc_get_vars_int(ncid,varid,c_start,c_count,c_stride,ptr);
|
2991
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
2992
|
+
|
2993
|
+
OBJ_TAINT(NArray);
|
2994
|
+
return NArray;
|
2995
|
+
}
|
2996
|
+
|
2997
|
+
VALUE
|
2998
|
+
NetCDF_get_vars_float(VALUE Var,VALUE start,VALUE end,VALUE stride)
|
2999
|
+
{
|
3000
|
+
int ncid;
|
3001
|
+
int varid;
|
3002
|
+
int status;
|
3003
|
+
float *ptr;
|
3004
|
+
int i;
|
3005
|
+
struct NetCDFVar *Netcdf_var;
|
3006
|
+
long l_start, l_end;
|
3007
|
+
size_t *c_start;
|
3008
|
+
size_t *c_count;
|
3009
|
+
ptrdiff_t *c_stride;
|
3010
|
+
int *shape; /* NArray uses int instead of size_t */
|
3011
|
+
int ndims;
|
3012
|
+
int *dimids;
|
3013
|
+
int nc_tlen=1;
|
3014
|
+
size_t dimlen;
|
3015
|
+
VALUE NArray;
|
3016
|
+
|
3017
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3018
|
+
ncid = Netcdf_var->ncid;
|
3019
|
+
varid = Netcdf_var->varid;
|
3020
|
+
|
3021
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3022
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3023
|
+
if(ndims == 0) {
|
3024
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
3025
|
+
}
|
3026
|
+
|
3027
|
+
dimids = ALLOCA_N(int,ndims);
|
3028
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3029
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3030
|
+
|
3031
|
+
Check_Type(start,T_ARRAY);
|
3032
|
+
if(RARRAY_LEN(start) < ndims){
|
3033
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
3034
|
+
}
|
3035
|
+
c_start = ALLOCA_N(size_t,ndims);
|
3036
|
+
for(i=0; i<ndims; i++){
|
3037
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3038
|
+
|
3039
|
+
if(l_start < 0) {
|
3040
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
3041
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3042
|
+
l_start += dimlen;
|
3043
|
+
}
|
3044
|
+
c_start[i]=l_start;
|
3045
|
+
}
|
3046
|
+
|
3047
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
3048
|
+
switch(TYPE(stride)){
|
3049
|
+
case T_NIL:
|
3050
|
+
for(i=0; i<ndims; i++){
|
3051
|
+
c_stride[i]=1;
|
3052
|
+
}
|
3053
|
+
break;
|
3054
|
+
default:
|
3055
|
+
Check_Type(stride,T_ARRAY);
|
3056
|
+
if(RARRAY_LEN(stride) < ndims) {
|
3057
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
|
3058
|
+
}
|
3059
|
+
for(i=0;i<ndims; i++){
|
3060
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
3061
|
+
if(c_stride[i]==0){
|
3062
|
+
rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
|
3063
|
+
}
|
3064
|
+
}
|
3065
|
+
}
|
3066
|
+
|
3067
|
+
c_count=ALLOCA_N(size_t,ndims);
|
3068
|
+
switch(TYPE(end)){
|
3069
|
+
case T_NIL:
|
3070
|
+
for(i=0; i<ndims; i++){
|
3071
|
+
nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3072
|
+
c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
|
3073
|
+
}
|
3074
|
+
break;
|
3075
|
+
default:
|
3076
|
+
Check_Type(end,T_ARRAY);
|
3077
|
+
if(RARRAY_LEN(end) <ndims) {
|
3078
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
3079
|
+
}
|
3080
|
+
for(i=0; i<ndims; i++){
|
3081
|
+
l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
3082
|
+
if(l_end < 0) {
|
3083
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3084
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3085
|
+
l_end +=dimlen;
|
3086
|
+
}
|
3087
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
3088
|
+
}
|
3089
|
+
}
|
3090
|
+
|
3091
|
+
for(i=0;i<ndims;i++){
|
3092
|
+
nc_tlen = nc_tlen*c_count[i];
|
3093
|
+
}
|
3094
|
+
|
3095
|
+
shape = ALLOCA_N(int,ndims);
|
3096
|
+
for(i=0;i<ndims;i++){
|
3097
|
+
shape[ndims-1-i]=c_count[i];
|
3098
|
+
}
|
3099
|
+
|
3100
|
+
Cfloat_to_NArray(NArray,ndims,shape,ptr);
|
3101
|
+
|
3102
|
+
|
3103
|
+
status = nc_get_vars_float(ncid,varid,c_start,c_count,c_stride,ptr);
|
3104
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3105
|
+
|
3106
|
+
OBJ_TAINT(NArray);
|
3107
|
+
return NArray;
|
3108
|
+
}
|
3109
|
+
|
3110
|
+
VALUE
|
3111
|
+
NetCDF_get_vars_double(VALUE Var,VALUE start,VALUE end,VALUE stride)
|
3112
|
+
{
|
3113
|
+
int ncid;
|
3114
|
+
int varid;
|
3115
|
+
int status;
|
3116
|
+
double *ptr;
|
3117
|
+
int i;
|
3118
|
+
struct NetCDFVar *Netcdf_var;
|
3119
|
+
long l_start, l_end;
|
3120
|
+
size_t *c_start;
|
3121
|
+
size_t *c_count;
|
3122
|
+
ptrdiff_t *c_stride;
|
3123
|
+
int *shape; /* NArray uses int instead of size_t */
|
3124
|
+
int ndims;
|
3125
|
+
int *dimids;
|
3126
|
+
int nc_tlen=1;
|
3127
|
+
size_t dimlen;
|
3128
|
+
VALUE NArray;
|
3129
|
+
|
3130
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3131
|
+
ncid = Netcdf_var->ncid;
|
3132
|
+
varid = Netcdf_var->varid;
|
3133
|
+
|
3134
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3135
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3136
|
+
if(ndims == 0) {
|
3137
|
+
rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
|
3138
|
+
}
|
3139
|
+
|
3140
|
+
dimids = ALLOCA_N(int,ndims);
|
3141
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3142
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3143
|
+
|
3144
|
+
Check_Type(start,T_ARRAY);
|
3145
|
+
if(RARRAY_LEN(start) < ndims){
|
3146
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
3147
|
+
}
|
3148
|
+
c_start = ALLOCA_N(size_t,ndims);
|
3149
|
+
for(i=0; i<ndims; i++){
|
3150
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3151
|
+
|
3152
|
+
if(l_start < 0) {
|
3153
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
3154
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3155
|
+
l_start += dimlen;
|
3156
|
+
}
|
3157
|
+
c_start[i]=l_start;
|
3158
|
+
}
|
3159
|
+
|
3160
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
3161
|
+
switch(TYPE(stride)){
|
3162
|
+
case T_NIL:
|
3163
|
+
for(i=0; i<ndims; i++){
|
3164
|
+
c_stride[i]=1;
|
3165
|
+
}
|
3166
|
+
break;
|
3167
|
+
default:
|
3168
|
+
Check_Type(stride,T_ARRAY);
|
3169
|
+
if(RARRAY_LEN(stride) < ndims) {
|
3170
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
|
3171
|
+
}
|
3172
|
+
for(i=0;i<ndims; i++){
|
3173
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
3174
|
+
if(c_stride[i]==0){
|
3175
|
+
rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
|
3176
|
+
}
|
3177
|
+
}
|
3178
|
+
}
|
3179
|
+
|
3180
|
+
c_count=ALLOCA_N(size_t,ndims);
|
3181
|
+
switch(TYPE(end)){
|
3182
|
+
case T_NIL:
|
3183
|
+
for(i=0; i<ndims; i++){
|
3184
|
+
nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3185
|
+
c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
|
3186
|
+
}
|
3187
|
+
break;
|
3188
|
+
default:
|
3189
|
+
Check_Type(end,T_ARRAY);
|
3190
|
+
if(RARRAY_LEN(end) <ndims) {
|
3191
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
3192
|
+
}
|
3193
|
+
for(i=0; i<ndims; i++){
|
3194
|
+
l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
3195
|
+
if(l_end < 0) {
|
3196
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3197
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3198
|
+
l_end +=dimlen;
|
3199
|
+
}
|
3200
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
3201
|
+
}
|
3202
|
+
}
|
3203
|
+
|
3204
|
+
for(i=0;i<ndims;i++){
|
3205
|
+
nc_tlen = nc_tlen*c_count[i];
|
3206
|
+
}
|
3207
|
+
|
3208
|
+
shape = ALLOCA_N(int,ndims);
|
3209
|
+
for(i=0;i<ndims;i++){
|
3210
|
+
shape[ndims-1-i]=c_count[i];
|
3211
|
+
}
|
3212
|
+
|
3213
|
+
Cdouble_to_NArray(NArray,ndims,shape,ptr);
|
3214
|
+
|
3215
|
+
status = nc_get_vars_double(ncid,varid,c_start,c_count,c_stride,ptr);
|
3216
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3217
|
+
|
3218
|
+
OBJ_TAINT(NArray);
|
3219
|
+
return NArray;
|
3220
|
+
}
|
3221
|
+
|
3222
|
+
|
3223
|
+
VALUE
|
3224
|
+
NetCDF_put_var_char(VALUE Var,VALUE NArray)
|
3225
|
+
{
|
3226
|
+
int ncid;
|
3227
|
+
int varid;
|
3228
|
+
int status;
|
3229
|
+
unsigned char *ptr,scalar;
|
3230
|
+
int len,i=0;
|
3231
|
+
struct NetCDFVar *Netcdf_var;
|
3232
|
+
int nc_tlen=1;
|
3233
|
+
int ndimsp;
|
3234
|
+
int dimids[NC_MAX_DIMS];
|
3235
|
+
size_t lengthp;
|
3236
|
+
char *var_name;
|
3237
|
+
|
3238
|
+
rb_secure(4);
|
3239
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3240
|
+
ncid=Netcdf_var->ncid;
|
3241
|
+
varid=Netcdf_var->varid;
|
3242
|
+
|
3243
|
+
Array_to_Cbyte_len(NArray,ptr,len);
|
3244
|
+
|
3245
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
3246
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3247
|
+
for(i=0;i<ndimsp;i++){
|
3248
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3249
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3250
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
3251
|
+
nc_tlen=lengthp*nc_tlen;
|
3252
|
+
}
|
3253
|
+
if(len == 1 && len != nc_tlen){
|
3254
|
+
scalar = *ptr;
|
3255
|
+
ptr = ALLOCA_N(unsigned char,nc_tlen);
|
3256
|
+
for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
|
3257
|
+
} else if(len != nc_tlen){
|
3258
|
+
var_name=ALLOCA_N(char,NC_MAX_NAME);
|
3259
|
+
status = nc_inq_varname(ncid,varid,var_name);
|
3260
|
+
if(status != NC_NOERR) NC_RAISE(status );
|
3261
|
+
rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array in the '%s'\n",var_name);
|
3262
|
+
}
|
3263
|
+
status = nc_put_var_text(ncid,varid,(char *)ptr);
|
3264
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
3265
|
+
return Qnil;
|
3266
|
+
}
|
3267
|
+
|
3268
|
+
VALUE
|
3269
|
+
NetCDF_put_var_byte(VALUE Var,VALUE NArray)
|
3270
|
+
{
|
3271
|
+
int ncid;
|
3272
|
+
int varid;
|
3273
|
+
int status;
|
3274
|
+
unsigned char *ptr,scalar;
|
3275
|
+
int len,i=0;
|
3276
|
+
struct NetCDFVar *Netcdf_var;
|
3277
|
+
int nc_tlen=1;
|
3278
|
+
int ndimsp;
|
3279
|
+
int dimids[NC_MAX_DIMS];
|
3280
|
+
size_t lengthp;
|
3281
|
+
char *var_name;
|
3282
|
+
|
3283
|
+
rb_secure(4);
|
3284
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3285
|
+
ncid=Netcdf_var->ncid;
|
3286
|
+
varid=Netcdf_var->varid;
|
3287
|
+
|
3288
|
+
Array_to_Cbyte_len(NArray,ptr,len);
|
3289
|
+
|
3290
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
3291
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3292
|
+
for(i=0;i<ndimsp;i++){
|
3293
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3294
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3295
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
3296
|
+
nc_tlen=lengthp*nc_tlen;
|
3297
|
+
}
|
3298
|
+
if(len == 1 && len != nc_tlen){
|
3299
|
+
scalar = *ptr;
|
3300
|
+
ptr = ALLOCA_N(unsigned char,nc_tlen);
|
3301
|
+
for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
|
3302
|
+
} else if(len != nc_tlen){
|
3303
|
+
var_name=ALLOCA_N(char,NC_MAX_NAME);
|
3304
|
+
status = nc_inq_varname(ncid,varid,var_name);
|
3305
|
+
if(status != NC_NOERR) NC_RAISE(status );
|
3306
|
+
rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array in the '%s'\n",var_name);
|
3307
|
+
}
|
3308
|
+
status = nc_put_var_uchar(ncid,varid,ptr);
|
3309
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
3310
|
+
return Qnil;
|
3311
|
+
}
|
3312
|
+
|
3313
|
+
VALUE
|
3314
|
+
NetCDF_put_var_short(VALUE Var,VALUE NArray)
|
3315
|
+
{
|
3316
|
+
int ncid;
|
3317
|
+
int varid;
|
3318
|
+
int status;
|
3319
|
+
short *ptr,scalar;
|
3320
|
+
int len,i=0;
|
3321
|
+
struct NetCDFVar *Netcdf_var;
|
3322
|
+
int nc_tlen=1;
|
3323
|
+
int ndimsp;
|
3324
|
+
int dimids[NC_MAX_DIMS];
|
3325
|
+
size_t lengthp;
|
3326
|
+
char *var_name;
|
3327
|
+
|
3328
|
+
rb_secure(4);
|
3329
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3330
|
+
ncid=Netcdf_var->ncid;
|
3331
|
+
varid=Netcdf_var->varid;
|
3332
|
+
Array_to_Csint_len(NArray,ptr,len);
|
3333
|
+
|
3334
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
3335
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3336
|
+
for(i=0;i<ndimsp;i++){
|
3337
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3338
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3339
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
3340
|
+
nc_tlen=lengthp*nc_tlen;
|
3341
|
+
}
|
3342
|
+
if(len == 1 && len != nc_tlen){
|
3343
|
+
scalar = *ptr;
|
3344
|
+
ptr = ALLOCA_N(short,nc_tlen);
|
3345
|
+
for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
|
3346
|
+
} else if(len != nc_tlen){
|
3347
|
+
var_name=ALLOCA_N(char,NC_MAX_NAME);
|
3348
|
+
status = nc_inq_varname(ncid,varid,var_name);
|
3349
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3350
|
+
rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
|
3351
|
+
}
|
3352
|
+
|
3353
|
+
status = nc_put_var_short(ncid,varid,ptr);
|
3354
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
3355
|
+
return Qnil;
|
3356
|
+
}
|
3357
|
+
|
3358
|
+
VALUE
|
3359
|
+
NetCDF_put_var_int(VALUE Var,VALUE NArray)
|
3360
|
+
{
|
3361
|
+
int ncid;
|
3362
|
+
int varid;
|
3363
|
+
int status;
|
3364
|
+
int *ptr,scalar;
|
3365
|
+
int len,i=0;
|
3366
|
+
struct NetCDFVar *Netcdf_var;
|
3367
|
+
int nc_tlen=1;
|
3368
|
+
int ndimsp;
|
3369
|
+
int dimids[NC_MAX_DIMS];
|
3370
|
+
size_t lengthp;
|
3371
|
+
char *var_name;
|
3372
|
+
|
3373
|
+
rb_secure(4);
|
3374
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3375
|
+
ncid=Netcdf_var->ncid;
|
3376
|
+
varid=Netcdf_var->varid;
|
3377
|
+
|
3378
|
+
Array_to_Clint_len(NArray,ptr,len);
|
3379
|
+
|
3380
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
3381
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3382
|
+
for(i=0;i<ndimsp;i++){
|
3383
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3384
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3385
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
3386
|
+
nc_tlen=lengthp*nc_tlen;
|
3387
|
+
}
|
3388
|
+
if(len == 1 && len != nc_tlen){
|
3389
|
+
scalar = *ptr;
|
3390
|
+
ptr = ALLOCA_N(int,nc_tlen);
|
3391
|
+
for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
|
3392
|
+
} else if(len != nc_tlen){
|
3393
|
+
var_name=ALLOCA_N(char,NC_MAX_NAME);
|
3394
|
+
status = nc_inq_varname(ncid,varid,var_name);
|
3395
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3396
|
+
rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
|
3397
|
+
}
|
3398
|
+
|
3399
|
+
|
3400
|
+
status = nc_put_var_int(ncid,varid,ptr);
|
3401
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
3402
|
+
return Qnil;
|
3403
|
+
}
|
3404
|
+
|
3405
|
+
|
3406
|
+
VALUE
|
3407
|
+
NetCDF_put_var_float(VALUE Var,VALUE NArray)
|
3408
|
+
{
|
3409
|
+
int ncid;
|
3410
|
+
int varid;
|
3411
|
+
int status;
|
3412
|
+
float *ptr,scalar;
|
3413
|
+
int len,i=0;
|
3414
|
+
struct NetCDFVar *Netcdf_var;
|
3415
|
+
int nc_tlen=1;
|
3416
|
+
int ndimsp;
|
3417
|
+
int dimids[NC_MAX_DIMS];
|
3418
|
+
size_t lengthp;
|
3419
|
+
char *var_name;
|
3420
|
+
|
3421
|
+
|
3422
|
+
rb_secure(4);
|
3423
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3424
|
+
ncid=Netcdf_var->ncid;
|
3425
|
+
varid=Netcdf_var->varid;
|
3426
|
+
|
3427
|
+
Array_to_Cfloat_len(NArray,ptr,len);
|
3428
|
+
|
3429
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
3430
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3431
|
+
for(i=0;i<ndimsp;i++){
|
3432
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3433
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3434
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
3435
|
+
nc_tlen=lengthp*nc_tlen;
|
3436
|
+
}
|
3437
|
+
if(len == 1 && len != nc_tlen){
|
3438
|
+
scalar = *ptr;
|
3439
|
+
ptr = ALLOCA_N(float,nc_tlen);
|
3440
|
+
for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
|
3441
|
+
} else if(len != nc_tlen){
|
3442
|
+
var_name=ALLOCA_N(char,NC_MAX_NAME);
|
3443
|
+
status = nc_inq_varname(ncid,varid,var_name);
|
3444
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3445
|
+
rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
|
3446
|
+
}
|
3447
|
+
|
3448
|
+
status = nc_put_var_float(ncid,varid,ptr);
|
3449
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
3450
|
+
return Qnil;
|
3451
|
+
}
|
3452
|
+
|
3453
|
+
VALUE
|
3454
|
+
NetCDF_put_var_double(VALUE Var,VALUE NArray)
|
3455
|
+
{
|
3456
|
+
int ncid;
|
3457
|
+
int varid;
|
3458
|
+
int status;
|
3459
|
+
double *ptr,scalar;
|
3460
|
+
int len,i=0;
|
3461
|
+
struct NetCDFVar *Netcdf_var;
|
3462
|
+
int nc_tlen=1;
|
3463
|
+
int ndimsp;
|
3464
|
+
int dimids[NC_MAX_DIMS];
|
3465
|
+
size_t lengthp;
|
3466
|
+
char *var_name;
|
3467
|
+
|
3468
|
+
|
3469
|
+
rb_secure(4);
|
3470
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3471
|
+
ncid=Netcdf_var->ncid;
|
3472
|
+
varid=Netcdf_var->varid;
|
3473
|
+
|
3474
|
+
Array_to_Cdouble_len(NArray,ptr,len);
|
3475
|
+
|
3476
|
+
status = nc_inq_varndims(ncid,varid,&ndimsp);
|
3477
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3478
|
+
for(i=0;i<ndimsp;i++){
|
3479
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3480
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3481
|
+
nc_inq_dimlen(ncid,dimids[i],&lengthp);
|
3482
|
+
nc_tlen=lengthp*nc_tlen;
|
3483
|
+
}
|
3484
|
+
if(len == 1 && len != nc_tlen){
|
3485
|
+
scalar = *ptr;
|
3486
|
+
ptr = ALLOCA_N(double,nc_tlen);
|
3487
|
+
for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
|
3488
|
+
} else if(len != nc_tlen){
|
3489
|
+
var_name=ALLOCA_N(char,NC_MAX_NAME);
|
3490
|
+
status = nc_inq_varname(ncid,varid,var_name);
|
3491
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3492
|
+
rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
|
3493
|
+
}
|
3494
|
+
|
3495
|
+
status = nc_put_var_double(ncid,varid,ptr);
|
3496
|
+
if(status !=NC_NOERR) NC_RAISE(status);
|
3497
|
+
return Qnil;
|
3498
|
+
}
|
3499
|
+
|
3500
|
+
VALUE
|
3501
|
+
NetCDF_put_var1_char(VALUE Var,VALUE NArray,VALUE start)
|
3502
|
+
{
|
3503
|
+
int ncid;
|
3504
|
+
int varid;
|
3505
|
+
int status;
|
3506
|
+
unsigned char *ptr;
|
3507
|
+
int i;
|
3508
|
+
struct NetCDFVar *Netcdf_var;
|
3509
|
+
long l_start;
|
3510
|
+
size_t *c_start;
|
3511
|
+
int ndims;
|
3512
|
+
int *dimids;
|
3513
|
+
size_t dimlen;
|
3514
|
+
|
3515
|
+
rb_secure(4);
|
3516
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3517
|
+
ncid=Netcdf_var->ncid;
|
3518
|
+
varid=Netcdf_var->varid;
|
3519
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3520
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3521
|
+
|
3522
|
+
|
3523
|
+
dimids = ALLOCA_N(int,ndims);
|
3524
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3525
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3526
|
+
|
3527
|
+
Check_Type(start,T_ARRAY);
|
3528
|
+
if(RARRAY_LEN(start) <ndims) {
|
3529
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
3530
|
+
}
|
3531
|
+
|
3532
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3533
|
+
for(i=0;i<ndims;i++){
|
3534
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3535
|
+
|
3536
|
+
if(l_start < 0) {
|
3537
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3538
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3539
|
+
l_start += dimlen;
|
3540
|
+
}
|
3541
|
+
c_start[i]=l_start;
|
3542
|
+
|
3543
|
+
}
|
3544
|
+
Array_to_Cbyte(NArray,ptr);
|
3545
|
+
|
3546
|
+
status = nc_put_var1_text(ncid,varid,c_start,(char *)ptr);
|
3547
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3548
|
+
return Qnil;
|
3549
|
+
}
|
3550
|
+
|
3551
|
+
VALUE
|
3552
|
+
NetCDF_put_var1_byte(VALUE Var,VALUE NArray,VALUE start)
|
3553
|
+
{
|
3554
|
+
int ncid;
|
3555
|
+
int varid;
|
3556
|
+
int status;
|
3557
|
+
unsigned char *ptr;
|
3558
|
+
int i;
|
3559
|
+
struct NetCDFVar *Netcdf_var;
|
3560
|
+
long l_start;
|
3561
|
+
size_t *c_start;
|
3562
|
+
int ndims;
|
3563
|
+
int *dimids;
|
3564
|
+
size_t dimlen;
|
3565
|
+
|
3566
|
+
rb_secure(4);
|
3567
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3568
|
+
ncid=Netcdf_var->ncid;
|
3569
|
+
varid=Netcdf_var->varid;
|
3570
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3571
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3572
|
+
|
3573
|
+
|
3574
|
+
dimids = ALLOCA_N(int,ndims);
|
3575
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3576
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3577
|
+
|
3578
|
+
Check_Type(start,T_ARRAY);
|
3579
|
+
if(RARRAY_LEN(start) <ndims) {
|
3580
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
3581
|
+
}
|
3582
|
+
|
3583
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3584
|
+
for(i=0;i<ndims;i++){
|
3585
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3586
|
+
|
3587
|
+
if(l_start < 0) {
|
3588
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3589
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3590
|
+
l_start += dimlen;
|
3591
|
+
}
|
3592
|
+
c_start[i]=l_start;
|
3593
|
+
|
3594
|
+
}
|
3595
|
+
Array_to_Cbyte(NArray,ptr);
|
3596
|
+
|
3597
|
+
status = nc_put_var1_uchar(ncid,varid,c_start,ptr);
|
3598
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3599
|
+
return Qnil;
|
3600
|
+
}
|
3601
|
+
|
3602
|
+
VALUE
|
3603
|
+
NetCDF_put_var1_sint(VALUE Var,VALUE NArray,VALUE start)
|
3604
|
+
{
|
3605
|
+
int ncid;
|
3606
|
+
int varid;
|
3607
|
+
int status;
|
3608
|
+
short *ptr;
|
3609
|
+
int i;
|
3610
|
+
struct NetCDFVar *Netcdf_var;
|
3611
|
+
long l_start;
|
3612
|
+
size_t *c_start;
|
3613
|
+
int ndims;
|
3614
|
+
int *dimids;
|
3615
|
+
size_t dimlen;
|
3616
|
+
|
3617
|
+
rb_secure(4);
|
3618
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3619
|
+
ncid=Netcdf_var->ncid;
|
3620
|
+
varid=Netcdf_var->varid;
|
3621
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3622
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3623
|
+
|
3624
|
+
|
3625
|
+
dimids = ALLOCA_N(int,ndims);
|
3626
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3627
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3628
|
+
|
3629
|
+
Check_Type(start,T_ARRAY);
|
3630
|
+
if(RARRAY_LEN(start) <ndims) {
|
3631
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
3632
|
+
}
|
3633
|
+
|
3634
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3635
|
+
for(i=0;i<ndims;i++){
|
3636
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3637
|
+
|
3638
|
+
if(l_start < 0) {
|
3639
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3640
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3641
|
+
l_start += dimlen;
|
3642
|
+
}
|
3643
|
+
c_start[i]=l_start;
|
3644
|
+
|
3645
|
+
}
|
3646
|
+
Array_to_Csint(NArray,ptr);
|
3647
|
+
|
3648
|
+
status = nc_put_var1_short(ncid,varid,c_start,ptr);
|
3649
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3650
|
+
return Qnil;
|
3651
|
+
}
|
3652
|
+
VALUE
|
3653
|
+
NetCDF_put_var1_int(VALUE Var,VALUE NArray,VALUE start)
|
3654
|
+
{
|
3655
|
+
int ncid;
|
3656
|
+
int varid;
|
3657
|
+
int status;
|
3658
|
+
int *ptr;
|
3659
|
+
int i;
|
3660
|
+
struct NetCDFVar *Netcdf_var;
|
3661
|
+
long l_start;
|
3662
|
+
size_t *c_start;
|
3663
|
+
int ndims;
|
3664
|
+
int *dimids;
|
3665
|
+
size_t dimlen;
|
3666
|
+
|
3667
|
+
rb_secure(4);
|
3668
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3669
|
+
ncid=Netcdf_var->ncid;
|
3670
|
+
varid=Netcdf_var->varid;
|
3671
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3672
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3673
|
+
|
3674
|
+
|
3675
|
+
dimids = ALLOCA_N(int,ndims);
|
3676
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3677
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3678
|
+
|
3679
|
+
Check_Type(start,T_ARRAY);
|
3680
|
+
if(RARRAY_LEN(start) <ndims) {
|
3681
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
3682
|
+
}
|
3683
|
+
|
3684
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3685
|
+
for(i=0;i<ndims;i++){
|
3686
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3687
|
+
|
3688
|
+
if(l_start < 0) {
|
3689
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3690
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3691
|
+
l_start += dimlen;
|
3692
|
+
}
|
3693
|
+
c_start[i]=l_start;
|
3694
|
+
|
3695
|
+
}
|
3696
|
+
Array_to_Clint(NArray,ptr);
|
3697
|
+
|
3698
|
+
status = nc_put_var1_int(ncid,varid,c_start,ptr);
|
3699
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3700
|
+
return Qnil;
|
3701
|
+
}
|
3702
|
+
|
3703
|
+
VALUE
|
3704
|
+
NetCDF_put_var1_float(VALUE Var,VALUE NArray,VALUE start)
|
3705
|
+
{
|
3706
|
+
int ncid;
|
3707
|
+
int varid;
|
3708
|
+
int status;
|
3709
|
+
float *ptr;
|
3710
|
+
int i;
|
3711
|
+
struct NetCDFVar *Netcdf_var;
|
3712
|
+
long l_start;
|
3713
|
+
size_t *c_start;
|
3714
|
+
int ndims;
|
3715
|
+
int *dimids;
|
3716
|
+
size_t dimlen;
|
3717
|
+
|
3718
|
+
rb_secure(4);
|
3719
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3720
|
+
ncid=Netcdf_var->ncid;
|
3721
|
+
varid=Netcdf_var->varid;
|
3722
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3723
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3724
|
+
|
3725
|
+
|
3726
|
+
dimids = ALLOCA_N(int,ndims);
|
3727
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3728
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3729
|
+
|
3730
|
+
Check_Type(start,T_ARRAY);
|
3731
|
+
if(RARRAY_LEN(start) <ndims) {
|
3732
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
3733
|
+
}
|
3734
|
+
|
3735
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3736
|
+
for(i=0;i<ndims;i++){
|
3737
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3738
|
+
|
3739
|
+
if(l_start < 0) {
|
3740
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3741
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3742
|
+
l_start += dimlen;
|
3743
|
+
}
|
3744
|
+
c_start[i]=l_start;
|
3745
|
+
|
3746
|
+
}
|
3747
|
+
Array_to_Cfloat(NArray,ptr);
|
3748
|
+
|
3749
|
+
status = nc_put_var1_float(ncid,varid,c_start,ptr);
|
3750
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3751
|
+
return Qnil;
|
3752
|
+
}
|
3753
|
+
|
3754
|
+
VALUE
|
3755
|
+
NetCDF_put_var1_double(VALUE Var,VALUE NArray,VALUE start)
|
3756
|
+
{
|
3757
|
+
int ncid;
|
3758
|
+
int varid;
|
3759
|
+
int status;
|
3760
|
+
double *ptr;
|
3761
|
+
int i;
|
3762
|
+
struct NetCDFVar *Netcdf_var;
|
3763
|
+
long l_start;
|
3764
|
+
size_t *c_start;
|
3765
|
+
int ndims;
|
3766
|
+
int *dimids;
|
3767
|
+
size_t dimlen;
|
3768
|
+
|
3769
|
+
rb_secure(4);
|
3770
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3771
|
+
ncid=Netcdf_var->ncid;
|
3772
|
+
varid=Netcdf_var->varid;
|
3773
|
+
status = nc_inq_varndims(ncid,varid,&ndims);
|
3774
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3775
|
+
|
3776
|
+
|
3777
|
+
dimids = ALLOCA_N(int,ndims);
|
3778
|
+
status = nc_inq_vardimid(ncid,varid,dimids);
|
3779
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3780
|
+
|
3781
|
+
Check_Type(start,T_ARRAY);
|
3782
|
+
if(RARRAY_LEN(start) <ndims) {
|
3783
|
+
rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
|
3784
|
+
}
|
3785
|
+
|
3786
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3787
|
+
for(i=0;i<ndims;i++){
|
3788
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3789
|
+
|
3790
|
+
if(l_start < 0) {
|
3791
|
+
status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
|
3792
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3793
|
+
l_start += dimlen;
|
3794
|
+
}
|
3795
|
+
c_start[i]=l_start;
|
3796
|
+
|
3797
|
+
}
|
3798
|
+
Array_to_Cdouble(NArray,ptr);
|
3799
|
+
|
3800
|
+
status = nc_put_var1_double(ncid,varid,c_start,ptr);
|
3801
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3802
|
+
return Qnil;
|
3803
|
+
}
|
3804
|
+
|
3805
|
+
|
3806
|
+
VALUE
|
3807
|
+
NetCDF_put_vars_char(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
|
3808
|
+
{
|
3809
|
+
int ncid;
|
3810
|
+
int varid;
|
3811
|
+
int status;
|
3812
|
+
unsigned char *ptr,scalar;
|
3813
|
+
int len,i;
|
3814
|
+
int c_count_all=1;
|
3815
|
+
struct NetCDFVar *Netcdf_var;
|
3816
|
+
long l_start, l_end;
|
3817
|
+
size_t *c_start;
|
3818
|
+
size_t *c_count;
|
3819
|
+
ptrdiff_t *c_stride;
|
3820
|
+
int ndims;
|
3821
|
+
int *shape;
|
3822
|
+
int *dimids;
|
3823
|
+
size_t dimlen;
|
3824
|
+
|
3825
|
+
rb_secure(4);
|
3826
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3827
|
+
ncid=Netcdf_var->ncid;
|
3828
|
+
varid=Netcdf_var->varid;
|
3829
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
3830
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3831
|
+
|
3832
|
+
dimids=ALLOCA_N(int,ndims);
|
3833
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
3834
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3835
|
+
|
3836
|
+
Check_Type(start,T_ARRAY);
|
3837
|
+
if(RARRAY_LEN(start) < ndims) {
|
3838
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
3839
|
+
}
|
3840
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3841
|
+
for(i=0; i<ndims; i++){
|
3842
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3843
|
+
|
3844
|
+
if(l_start < 0) {
|
3845
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
3846
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3847
|
+
l_start += dimlen;
|
3848
|
+
}
|
3849
|
+
c_start[i]=l_start;
|
3850
|
+
}
|
3851
|
+
|
3852
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
3853
|
+
switch(TYPE(stride)){
|
3854
|
+
case T_NIL:
|
3855
|
+
for(i=0; i<ndims; i++){
|
3856
|
+
c_stride[i]=1;
|
3857
|
+
}
|
3858
|
+
break;
|
3859
|
+
default:
|
3860
|
+
Check_Type(stride,T_ARRAY);
|
3861
|
+
if(RARRAY_LEN(stride) < ndims) {
|
3862
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n");
|
3863
|
+
}
|
3864
|
+
for(i=0; i<ndims; i++){
|
3865
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
3866
|
+
if(c_stride[i]==0) {
|
3867
|
+
rb_raise(rb_eNetcdfError, "stride cannot be zero\n");
|
3868
|
+
}
|
3869
|
+
}
|
3870
|
+
}
|
3871
|
+
|
3872
|
+
Array_to_Cbyte_len_shape(NArray,ptr,len,shape);
|
3873
|
+
|
3874
|
+
c_count=ALLOCA_N(size_t,ndims);
|
3875
|
+
switch(TYPE(end)){
|
3876
|
+
case T_NIL:
|
3877
|
+
for(i=0; i<ndims; i++){
|
3878
|
+
c_count[i]=shape[i];
|
3879
|
+
}
|
3880
|
+
c_count_all=len;
|
3881
|
+
break;
|
3882
|
+
default:
|
3883
|
+
Check_Type(end,T_ARRAY);
|
3884
|
+
if(RARRAY_LEN(end) < ndims) {
|
3885
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
3886
|
+
}
|
3887
|
+
for(i=0; i<ndims; i++){
|
3888
|
+
l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
3889
|
+
if(l_end < 0) {
|
3890
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
3891
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3892
|
+
l_end += dimlen;
|
3893
|
+
}
|
3894
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
3895
|
+
c_count_all=c_count[i]*c_count_all;
|
3896
|
+
}
|
3897
|
+
if(len == 1 && len != c_count_all){
|
3898
|
+
scalar = *ptr;
|
3899
|
+
ptr = ALLOCA_N(unsigned char,c_count_all);
|
3900
|
+
for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
|
3901
|
+
} else if(len != c_count_all) {
|
3902
|
+
rb_raise(rb_eNetcdfError,
|
3903
|
+
"lengh of the array does not agree with that of the subset\n");
|
3904
|
+
}
|
3905
|
+
}
|
3906
|
+
|
3907
|
+
status = nc_put_vars_text(ncid,varid,c_start,c_count,c_stride,(char *)ptr);
|
3908
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3909
|
+
return Qnil;
|
3910
|
+
}
|
3911
|
+
|
3912
|
+
VALUE
|
3913
|
+
NetCDF_put_vars_byte(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
|
3914
|
+
{
|
3915
|
+
int ncid;
|
3916
|
+
int varid;
|
3917
|
+
int status;
|
3918
|
+
unsigned char *ptr,scalar;
|
3919
|
+
int len,i;
|
3920
|
+
int c_count_all=1;
|
3921
|
+
struct NetCDFVar *Netcdf_var;
|
3922
|
+
long l_start, l_end;
|
3923
|
+
size_t *c_start;
|
3924
|
+
size_t *c_count;
|
3925
|
+
ptrdiff_t *c_stride;
|
3926
|
+
int ndims;
|
3927
|
+
int *shape;
|
3928
|
+
int *dimids;
|
3929
|
+
size_t dimlen;
|
3930
|
+
|
3931
|
+
rb_secure(4);
|
3932
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
3933
|
+
ncid=Netcdf_var->ncid;
|
3934
|
+
varid=Netcdf_var->varid;
|
3935
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
3936
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3937
|
+
|
3938
|
+
dimids=ALLOCA_N(int,ndims);
|
3939
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
3940
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3941
|
+
|
3942
|
+
Check_Type(start,T_ARRAY);
|
3943
|
+
if(RARRAY_LEN(start) < ndims) {
|
3944
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
3945
|
+
}
|
3946
|
+
c_start=ALLOCA_N(size_t,ndims);
|
3947
|
+
for(i=0; i<ndims; i++){
|
3948
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
3949
|
+
|
3950
|
+
if(l_start < 0) {
|
3951
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
3952
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3953
|
+
l_start += dimlen;
|
3954
|
+
}
|
3955
|
+
c_start[i]=l_start;
|
3956
|
+
}
|
3957
|
+
|
3958
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
3959
|
+
switch(TYPE(stride)){
|
3960
|
+
case T_NIL:
|
3961
|
+
for(i=0; i<ndims; i++){
|
3962
|
+
c_stride[i]=1;
|
3963
|
+
}
|
3964
|
+
break;
|
3965
|
+
default:
|
3966
|
+
Check_Type(stride,T_ARRAY);
|
3967
|
+
if(RARRAY_LEN(stride) < ndims) {
|
3968
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n");
|
3969
|
+
}
|
3970
|
+
for(i=0; i<ndims; i++){
|
3971
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
3972
|
+
if(c_stride[i]==0) {
|
3973
|
+
rb_raise(rb_eNetcdfError, "stride cannot be zero\n");
|
3974
|
+
}
|
3975
|
+
}
|
3976
|
+
}
|
3977
|
+
|
3978
|
+
Array_to_Cbyte_len_shape(NArray,ptr,len,shape);
|
3979
|
+
|
3980
|
+
c_count=ALLOCA_N(size_t,ndims);
|
3981
|
+
switch(TYPE(end)){
|
3982
|
+
case T_NIL:
|
3983
|
+
for(i=0; i<ndims; i++){
|
3984
|
+
c_count[i]=shape[i];
|
3985
|
+
}
|
3986
|
+
c_count_all=len;
|
3987
|
+
break;
|
3988
|
+
default:
|
3989
|
+
Check_Type(end,T_ARRAY);
|
3990
|
+
if(RARRAY_LEN(end) < ndims) {
|
3991
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
3992
|
+
}
|
3993
|
+
for(i=0; i<ndims; i++){
|
3994
|
+
l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
3995
|
+
if(l_end < 0) {
|
3996
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
3997
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
3998
|
+
l_end += dimlen;
|
3999
|
+
}
|
4000
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
4001
|
+
c_count_all=c_count[i]*c_count_all;
|
4002
|
+
}
|
4003
|
+
if(len == 1 && len != c_count_all){
|
4004
|
+
scalar = *ptr;
|
4005
|
+
ptr = ALLOCA_N(unsigned char,c_count_all);
|
4006
|
+
for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
|
4007
|
+
} else if(len != c_count_all) {
|
4008
|
+
rb_raise(rb_eNetcdfError,
|
4009
|
+
"lengh of the array does not agree with that of the subset\n");
|
4010
|
+
}
|
4011
|
+
}
|
4012
|
+
|
4013
|
+
status = nc_put_vars_uchar(ncid,varid,c_start,c_count,c_stride,ptr);
|
4014
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4015
|
+
return Qnil;
|
4016
|
+
}
|
4017
|
+
|
4018
|
+
VALUE
|
4019
|
+
NetCDF_put_vars_sint(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
|
4020
|
+
{
|
4021
|
+
int ncid;
|
4022
|
+
int varid;
|
4023
|
+
int status;
|
4024
|
+
short *ptr,scalar;
|
4025
|
+
int len,i;
|
4026
|
+
int c_count_all=1;
|
4027
|
+
struct NetCDFVar *Netcdf_var;
|
4028
|
+
long l_start, l_end;
|
4029
|
+
size_t *c_start;
|
4030
|
+
size_t *c_count;
|
4031
|
+
ptrdiff_t *c_stride;
|
4032
|
+
int ndims;
|
4033
|
+
int *shape;
|
4034
|
+
int *dimids;
|
4035
|
+
size_t dimlen;
|
4036
|
+
|
4037
|
+
rb_secure(4);
|
4038
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
4039
|
+
ncid=Netcdf_var->ncid;
|
4040
|
+
varid=Netcdf_var->varid;
|
4041
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
4042
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4043
|
+
|
4044
|
+
dimids=ALLOCA_N(int,ndims);
|
4045
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
4046
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4047
|
+
|
4048
|
+
Check_Type(start,T_ARRAY);
|
4049
|
+
if(RARRAY_LEN(start) < ndims) {
|
4050
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
4051
|
+
}
|
4052
|
+
c_start=ALLOCA_N(size_t,ndims);
|
4053
|
+
for(i=0; i<ndims; i++){
|
4054
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
4055
|
+
|
4056
|
+
if(l_start < 0) {
|
4057
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4058
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4059
|
+
l_start += dimlen;
|
4060
|
+
}
|
4061
|
+
c_start[i]=l_start;
|
4062
|
+
}
|
4063
|
+
|
4064
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
4065
|
+
switch(TYPE(stride)){
|
4066
|
+
case T_NIL:
|
4067
|
+
for(i=0; i<ndims; i++){
|
4068
|
+
c_stride[i]=1;
|
4069
|
+
}
|
4070
|
+
break;
|
4071
|
+
default:
|
4072
|
+
Check_Type(stride,T_ARRAY);
|
4073
|
+
if(RARRAY_LEN(stride) < ndims) {
|
4074
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n");
|
4075
|
+
}
|
4076
|
+
for(i=0; i<ndims; i++){
|
4077
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
4078
|
+
if(c_stride[i]==0) {
|
4079
|
+
rb_raise(rb_eNetcdfError, "stride cannot be zero\n");
|
4080
|
+
}
|
4081
|
+
}
|
4082
|
+
}
|
4083
|
+
|
4084
|
+
Array_to_Csint_len_shape(NArray,ptr,len,shape);
|
4085
|
+
|
4086
|
+
c_count=ALLOCA_N(size_t,ndims);
|
4087
|
+
switch(TYPE(end)){
|
4088
|
+
case T_NIL:
|
4089
|
+
for(i=0; i<ndims; i++){
|
4090
|
+
c_count[i]=shape[i];
|
4091
|
+
}
|
4092
|
+
c_count_all=len;
|
4093
|
+
break;
|
4094
|
+
default:
|
4095
|
+
Check_Type(end,T_ARRAY);
|
4096
|
+
if(RARRAY_LEN(end) < ndims) {
|
4097
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
4098
|
+
}
|
4099
|
+
for(i=0; i<ndims; i++){
|
4100
|
+
l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
4101
|
+
if(l_end < 0) {
|
4102
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4103
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4104
|
+
l_end += dimlen;
|
4105
|
+
}
|
4106
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
4107
|
+
c_count_all=c_count[i]*c_count_all;
|
4108
|
+
}
|
4109
|
+
if(len == 1 && len != c_count_all){
|
4110
|
+
scalar = *ptr;
|
4111
|
+
ptr = ALLOCA_N(short,c_count_all);
|
4112
|
+
for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
|
4113
|
+
} else if(len != c_count_all) {
|
4114
|
+
rb_raise(rb_eNetcdfError,
|
4115
|
+
"lengh of the array does not agree with that of the subset\n");
|
4116
|
+
}
|
4117
|
+
}
|
4118
|
+
|
4119
|
+
status = nc_put_vars_short(ncid,varid,c_start,c_count,c_stride,ptr);
|
4120
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4121
|
+
return Qnil;
|
4122
|
+
}
|
4123
|
+
|
4124
|
+
|
4125
|
+
VALUE
|
4126
|
+
NetCDF_put_vars_int(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
|
4127
|
+
{
|
4128
|
+
int ncid;
|
4129
|
+
int varid;
|
4130
|
+
int status;
|
4131
|
+
int *ptr,scalar;
|
4132
|
+
int len,i;
|
4133
|
+
int c_count_all=1;
|
4134
|
+
struct NetCDFVar *Netcdf_var;
|
4135
|
+
long l_start, l_end;
|
4136
|
+
size_t *c_start;
|
4137
|
+
size_t *c_count;
|
4138
|
+
ptrdiff_t *c_stride;
|
4139
|
+
int ndims;
|
4140
|
+
int *shape;
|
4141
|
+
int *dimids;
|
4142
|
+
size_t dimlen;
|
4143
|
+
|
4144
|
+
rb_secure(4);
|
4145
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
4146
|
+
ncid=Netcdf_var->ncid;
|
4147
|
+
varid=Netcdf_var->varid;
|
4148
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
4149
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4150
|
+
|
4151
|
+
dimids=ALLOCA_N(int,ndims);
|
4152
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
4153
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4154
|
+
|
4155
|
+
Check_Type(start,T_ARRAY);
|
4156
|
+
if(RARRAY_LEN(start) < ndims) {
|
4157
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
4158
|
+
}
|
4159
|
+
c_start=ALLOCA_N(size_t,ndims);
|
4160
|
+
for(i=0; i<ndims; i++){
|
4161
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
4162
|
+
|
4163
|
+
if(l_start < 0) {
|
4164
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4165
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4166
|
+
l_start += dimlen;
|
4167
|
+
}
|
4168
|
+
c_start[i]=l_start;
|
4169
|
+
}
|
4170
|
+
|
4171
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
4172
|
+
switch(TYPE(stride)){
|
4173
|
+
case T_NIL:
|
4174
|
+
for(i=0; i<ndims; i++){
|
4175
|
+
c_stride[i]=1;
|
4176
|
+
}
|
4177
|
+
break;
|
4178
|
+
default:
|
4179
|
+
Check_Type(stride,T_ARRAY);
|
4180
|
+
if(RARRAY_LEN(stride) < ndims) {
|
4181
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n");
|
4182
|
+
}
|
4183
|
+
for(i=0; i<ndims; i++){
|
4184
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
4185
|
+
if(c_stride[i]==0) {
|
4186
|
+
rb_raise(rb_eNetcdfError, "stride cannot be zero\n");
|
4187
|
+
}
|
4188
|
+
}
|
4189
|
+
}
|
4190
|
+
|
4191
|
+
Array_to_Clint_len_shape(NArray,ptr,len,shape);
|
4192
|
+
|
4193
|
+
c_count=ALLOCA_N(size_t,ndims);
|
4194
|
+
switch(TYPE(end)){
|
4195
|
+
case T_NIL:
|
4196
|
+
for(i=0; i<ndims; i++){
|
4197
|
+
c_count[i]=shape[i];
|
4198
|
+
}
|
4199
|
+
c_count_all=len;
|
4200
|
+
break;
|
4201
|
+
default:
|
4202
|
+
Check_Type(end,T_ARRAY);
|
4203
|
+
if(RARRAY_LEN(end) < ndims) {
|
4204
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
4205
|
+
}
|
4206
|
+
for(i=0; i<ndims; i++){
|
4207
|
+
l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
4208
|
+
if(l_end < 0) {
|
4209
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4210
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4211
|
+
l_end += dimlen;
|
4212
|
+
}
|
4213
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
4214
|
+
c_count_all=c_count[i]*c_count_all;
|
4215
|
+
}
|
4216
|
+
if(len == 1 && len != c_count_all){
|
4217
|
+
scalar = *ptr;
|
4218
|
+
ptr = ALLOCA_N(int,c_count_all);
|
4219
|
+
for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
|
4220
|
+
} else if(len != c_count_all) {
|
4221
|
+
rb_raise(rb_eNetcdfError,
|
4222
|
+
"length of the array does not agree with that of the subset\n");
|
4223
|
+
}
|
4224
|
+
}
|
4225
|
+
|
4226
|
+
status = nc_put_vars_int(ncid,varid,c_start,c_count,c_stride,ptr);
|
4227
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4228
|
+
return Qnil;
|
4229
|
+
}
|
4230
|
+
|
4231
|
+
|
4232
|
+
VALUE
|
4233
|
+
NetCDF_put_vars_float(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
|
4234
|
+
{
|
4235
|
+
int ncid;
|
4236
|
+
int varid;
|
4237
|
+
int status;
|
4238
|
+
float *ptr,scalar;
|
4239
|
+
int len,i;
|
4240
|
+
int c_count_all=1;
|
4241
|
+
struct NetCDFVar *Netcdf_var;
|
4242
|
+
long l_start, l_end;
|
4243
|
+
size_t *c_start;
|
4244
|
+
size_t *c_count;
|
4245
|
+
ptrdiff_t *c_stride;
|
4246
|
+
int ndims;
|
4247
|
+
int *shape;
|
4248
|
+
int *dimids;
|
4249
|
+
size_t dimlen;
|
4250
|
+
|
4251
|
+
rb_secure(4);
|
4252
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
4253
|
+
ncid=Netcdf_var->ncid;
|
4254
|
+
varid=Netcdf_var->varid;
|
4255
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
4256
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4257
|
+
|
4258
|
+
dimids=ALLOCA_N(int,ndims);
|
4259
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
4260
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4261
|
+
|
4262
|
+
Check_Type(start,T_ARRAY);
|
4263
|
+
if(RARRAY_LEN(start) < ndims) {
|
4264
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
4265
|
+
}
|
4266
|
+
c_start=ALLOCA_N(size_t,ndims);
|
4267
|
+
for(i=0; i<ndims; i++){
|
4268
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
4269
|
+
|
4270
|
+
if(l_start < 0) {
|
4271
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4272
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4273
|
+
l_start += dimlen;
|
4274
|
+
}
|
4275
|
+
c_start[i]=l_start;
|
4276
|
+
}
|
4277
|
+
|
4278
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
4279
|
+
switch(TYPE(stride)){
|
4280
|
+
case T_NIL:
|
4281
|
+
for(i=0; i<ndims; i++){
|
4282
|
+
c_stride[i]=1;
|
4283
|
+
}
|
4284
|
+
break;
|
4285
|
+
default:
|
4286
|
+
Check_Type(stride,T_ARRAY);
|
4287
|
+
if(RARRAY_LEN(stride) < ndims) {
|
4288
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n");
|
4289
|
+
}
|
4290
|
+
for(i=0; i<ndims; i++){
|
4291
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
4292
|
+
if(c_stride[i]==0) {
|
4293
|
+
rb_raise(rb_eNetcdfError, "stride cannot be zero\n");
|
4294
|
+
}
|
4295
|
+
}
|
4296
|
+
}
|
4297
|
+
|
4298
|
+
Array_to_Cfloat_len_shape(NArray,ptr,len,shape);
|
4299
|
+
|
4300
|
+
c_count=ALLOCA_N(size_t,ndims);
|
4301
|
+
switch(TYPE(end)){
|
4302
|
+
case T_NIL:
|
4303
|
+
for(i=0; i<ndims; i++){
|
4304
|
+
c_count[i]=shape[i];
|
4305
|
+
}
|
4306
|
+
c_count_all=len;
|
4307
|
+
break;
|
4308
|
+
default:
|
4309
|
+
Check_Type(end,T_ARRAY);
|
4310
|
+
if(RARRAY_LEN(end) < ndims) {
|
4311
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
4312
|
+
}
|
4313
|
+
for(i=0; i<ndims; i++){
|
4314
|
+
l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
4315
|
+
if(l_end < 0) {
|
4316
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4317
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4318
|
+
l_end += dimlen;
|
4319
|
+
}
|
4320
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
4321
|
+
c_count_all=c_count[i]*c_count_all;
|
4322
|
+
}
|
4323
|
+
if(len == 1 && len != c_count_all){
|
4324
|
+
scalar = *ptr;
|
4325
|
+
ptr = ALLOCA_N(float,c_count_all);
|
4326
|
+
for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
|
4327
|
+
} else if(len != c_count_all) {
|
4328
|
+
rb_raise(rb_eNetcdfError,
|
4329
|
+
"lengh of the array does not agree with that of the subset\n");
|
4330
|
+
}
|
4331
|
+
}
|
4332
|
+
|
4333
|
+
status = nc_put_vars_float(ncid,varid,c_start,c_count,c_stride,ptr);
|
4334
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4335
|
+
return Qnil;
|
4336
|
+
}
|
4337
|
+
|
4338
|
+
|
4339
|
+
VALUE
|
4340
|
+
NetCDF_put_vars_double(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
|
4341
|
+
{
|
4342
|
+
int ncid;
|
4343
|
+
int varid;
|
4344
|
+
int status;
|
4345
|
+
double *ptr,scalar;
|
4346
|
+
int len,i;
|
4347
|
+
int c_count_all=1;
|
4348
|
+
struct NetCDFVar *Netcdf_var;
|
4349
|
+
long l_start, l_end;
|
4350
|
+
size_t *c_start;
|
4351
|
+
size_t *c_count;
|
4352
|
+
ptrdiff_t *c_stride;
|
4353
|
+
int ndims;
|
4354
|
+
int *shape;
|
4355
|
+
int *dimids;
|
4356
|
+
size_t dimlen;
|
4357
|
+
|
4358
|
+
rb_secure(4);
|
4359
|
+
Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
|
4360
|
+
ncid=Netcdf_var->ncid;
|
4361
|
+
varid=Netcdf_var->varid;
|
4362
|
+
status = nc_inq_varndims(ncid, varid, &ndims);
|
4363
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4364
|
+
|
4365
|
+
dimids=ALLOCA_N(int,ndims);
|
4366
|
+
status = nc_inq_vardimid(ncid, varid, dimids);
|
4367
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4368
|
+
|
4369
|
+
Check_Type(start,T_ARRAY);
|
4370
|
+
if(RARRAY_LEN(start) < ndims) {
|
4371
|
+
rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
|
4372
|
+
}
|
4373
|
+
c_start=ALLOCA_N(size_t,ndims);
|
4374
|
+
for(i=0; i<ndims; i++){
|
4375
|
+
l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
|
4376
|
+
|
4377
|
+
if(l_start < 0) {
|
4378
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4379
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4380
|
+
l_start += dimlen;
|
4381
|
+
}
|
4382
|
+
c_start[i]=l_start;
|
4383
|
+
}
|
4384
|
+
|
4385
|
+
c_stride=ALLOCA_N(ptrdiff_t,ndims);
|
4386
|
+
switch(TYPE(stride)){
|
4387
|
+
case T_NIL:
|
4388
|
+
for(i=0; i<ndims; i++){
|
4389
|
+
c_stride[i]=1;
|
4390
|
+
}
|
4391
|
+
break;
|
4392
|
+
default:
|
4393
|
+
Check_Type(stride,T_ARRAY);
|
4394
|
+
if(RARRAY_LEN(stride) < ndims) {
|
4395
|
+
rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n");
|
4396
|
+
}
|
4397
|
+
for(i=0; i<ndims; i++){
|
4398
|
+
c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
|
4399
|
+
if(c_stride[i]==0) {
|
4400
|
+
rb_raise(rb_eNetcdfError, "stride cannot be zero\n");
|
4401
|
+
}
|
4402
|
+
}
|
4403
|
+
}
|
4404
|
+
|
4405
|
+
Array_to_Cdouble_len_shape(NArray,ptr,len,shape);
|
4406
|
+
|
4407
|
+
c_count=ALLOCA_N(size_t,ndims);
|
4408
|
+
switch(TYPE(end)){
|
4409
|
+
case T_NIL:
|
4410
|
+
for(i=0; i<ndims; i++){
|
4411
|
+
c_count[i]=shape[i];
|
4412
|
+
}
|
4413
|
+
c_count_all=len;
|
4414
|
+
break;
|
4415
|
+
default:
|
4416
|
+
Check_Type(end,T_ARRAY);
|
4417
|
+
if(RARRAY_LEN(end) < ndims) {
|
4418
|
+
rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
|
4419
|
+
}
|
4420
|
+
for(i=0; i<ndims; i++){
|
4421
|
+
l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
|
4422
|
+
if(l_end < 0) {
|
4423
|
+
status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
|
4424
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4425
|
+
l_end += dimlen;
|
4426
|
+
}
|
4427
|
+
c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
|
4428
|
+
c_count_all=c_count[i]*c_count_all;
|
4429
|
+
}
|
4430
|
+
if(len == 1 && len != c_count_all){
|
4431
|
+
scalar = *ptr;
|
4432
|
+
ptr = ALLOCA_N(double,c_count_all);
|
4433
|
+
for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
|
4434
|
+
} else if(len != c_count_all) {
|
4435
|
+
rb_raise(rb_eNetcdfError,
|
4436
|
+
"lengh of the array does not agree with that of the subset\n");
|
4437
|
+
}
|
4438
|
+
}
|
4439
|
+
|
4440
|
+
status = nc_put_vars_double(ncid,varid,c_start,c_count,c_stride,ptr);
|
4441
|
+
if(status != NC_NOERR) NC_RAISE(status);
|
4442
|
+
return Qnil;
|
4443
|
+
}
|
4444
|
+
|
4445
|
+
void
|
4446
|
+
Init_netcdfraw(void)
|
4447
|
+
{
|
4448
|
+
mNumRu = rb_define_module("NumRu");
|
4449
|
+
|
4450
|
+
/* Difinitions of the classes */
|
4451
|
+
cNetCDF = rb_define_class_under(mNumRu, "NetCDF", rb_cObject);
|
4452
|
+
cNetCDFDim = rb_define_class_under(mNumRu, "NetCDFDim", rb_cObject);
|
4453
|
+
cNetCDFAtt = rb_define_class_under(mNumRu, "NetCDFAtt", rb_cObject);
|
4454
|
+
cNetCDFVar = rb_define_class_under(mNumRu, "NetCDFVar", rb_cObject);
|
4455
|
+
|
4456
|
+
rb_eNetcdfError = rb_define_class("NetcdfError",rb_eStandardError);
|
4457
|
+
rb_eNetcdfBadid = rb_define_class("NetcdfBadid",rb_eNetcdfError);
|
4458
|
+
rb_eNetcdfNfile = rb_define_class("NetcdfNfile",rb_eNetcdfError);
|
4459
|
+
rb_eNetcdfExist = rb_define_class("NetcdfExist",rb_eNetcdfError);
|
4460
|
+
rb_eNetcdfInval = rb_define_class("NetcdfInval",rb_eNetcdfError);
|
4461
|
+
rb_eNetcdfPerm = rb_define_class("NetcdfPerm",rb_eNetcdfError);
|
4462
|
+
rb_eNetcdfNotindefine = rb_define_class("NetcdfNotindefine",rb_eNetcdfError);
|
4463
|
+
rb_eNetcdfIndefine = rb_define_class("NetcdfIndefine",rb_eNetcdfError);
|
4464
|
+
rb_eNetcdfInvalcoords = rb_define_class("NetcdfInvalcoords",rb_eNetcdfError);
|
4465
|
+
rb_eNetcdfMaxdims = rb_define_class("NetcdfMaxdims",rb_eNetcdfError);
|
4466
|
+
rb_eNetcdfNameinuse = rb_define_class("NetcdfNameinuse",rb_eNetcdfError);
|
4467
|
+
rb_eNetcdfNotatt = rb_define_class("NetcdfNotatt",rb_eNetcdfError);
|
4468
|
+
rb_eNetcdfMaxatts = rb_define_class("NetcdfMaxatts",rb_eNetcdfError);
|
4469
|
+
rb_eNetcdfBadtype = rb_define_class("NetcdfBadtype",rb_eNetcdfError);
|
4470
|
+
rb_eNetcdfBaddim = rb_define_class("NetcdfBaddim",rb_eNetcdfError);
|
4471
|
+
rb_eNetcdfUnlimpos = rb_define_class("NetcdFUnlimpos",rb_eNetcdfError);
|
4472
|
+
rb_eNetcdfMaxvars = rb_define_class("NetcdfMaxvars",rb_eNetcdfError);
|
4473
|
+
rb_eNetcdfNotvar = rb_define_class("NetcdfNotvar",rb_eNetcdfError);
|
4474
|
+
rb_eNetcdfGlobal = rb_define_class("NetcdfGlobal",rb_eNetcdfError);
|
4475
|
+
rb_eNetcdfNotnc = rb_define_class("NetcdfNotnc",rb_eNetcdfError);
|
4476
|
+
rb_eNetcdfSts = rb_define_class("NetcdfSts",rb_eNetcdfError);
|
4477
|
+
rb_eNetcdfMaxname = rb_define_class("NetcdfMaxname",rb_eNetcdfError);
|
4478
|
+
rb_eNetcdfUnlimit = rb_define_class("NetcdfUnlimit",rb_eNetcdfError);
|
4479
|
+
rb_eNetcdfNorecvars = rb_define_class("NetcdfNorecvars",rb_eNetcdfError);
|
4480
|
+
rb_eNetcdfChar = rb_define_class("NetcdfChar",rb_eNetcdfError);
|
4481
|
+
rb_eNetcdfEdge = rb_define_class("NetcdfEdge",rb_eNetcdfError);
|
4482
|
+
rb_eNetcdfStride = rb_define_class("NetcdfStride",rb_eNetcdfError);
|
4483
|
+
rb_eNetcdfBadname = rb_define_class("NetcdfBadname",rb_eNetcdfError);
|
4484
|
+
/* N.B. following must match value in ncx.h */
|
4485
|
+
rb_eNetcdfRange = rb_define_class("NetcdfRange",rb_eNetcdfError);
|
4486
|
+
rb_eNetcdfNomem = rb_define_class("NetcdfNomem",rb_eNetcdfError);
|
4487
|
+
/* Global error status */
|
4488
|
+
rb_eNetcdfEntool = rb_define_class("NetcdfEntool",rb_eNetcdfError);
|
4489
|
+
rb_eNetcdfExdr = rb_define_class("NetcdfExdr",rb_eNetcdfError);
|
4490
|
+
rb_eNetcdfSyserr = rb_define_class("NetcdfSyserr",rb_eNetcdfError);
|
4491
|
+
/* Global options variable. Used to determine behavior of error handler. */
|
4492
|
+
rb_eNetcdfFatal = rb_define_class("NetcdfFatal",rb_eNetcdfError);
|
4493
|
+
|
4494
|
+
/* Class Constants Definition */
|
4495
|
+
rb_define_const(cNetCDF, "NC_NOWRITE", INT2FIX(NC_NOWRITE));
|
4496
|
+
rb_define_const(cNetCDF, "NC_WRITE", INT2FIX(NC_WRITE));
|
4497
|
+
rb_define_const(cNetCDF, "NC_SHARE", INT2FIX(NC_SHARE));
|
4498
|
+
rb_define_const(cNetCDF, "NC_CLOBBER", INT2FIX(NC_CLOBBER));
|
4499
|
+
rb_define_const(cNetCDF, "NC_NOCLOBBER", INT2FIX(NC_NOCLOBBER));
|
4500
|
+
|
4501
|
+
/* Difinitions of the ruby methods */
|
4502
|
+
/* The methods of the NetCDF class */
|
4503
|
+
rb_define_singleton_method(cNetCDF,"nc_open",NetCDF_open,2);
|
4504
|
+
rb_define_method(cNetCDF,"clone",NetCDF_clone,0);
|
4505
|
+
rb_define_method(cNetCDF,"close",NetCDF_close,0);
|
4506
|
+
/* rb_define_singleton_method(cNetCDF,"new",NetCDF_open,2); */
|
4507
|
+
rb_define_singleton_method(cNetCDF,"nc_create",NetCDF_create,2);
|
4508
|
+
rb_define_method(cNetCDF,"def_dim",NetCDF_def_dim,2);
|
4509
|
+
rb_define_method(cNetCDF,"def_var",NetCDF_def_var,3);
|
4510
|
+
rb_define_method(cNetCDF,"put_attraw",NetCDF_put_att,3);
|
4511
|
+
rb_define_method(cNetCDF,"redef",NetCDF_redef,0);
|
4512
|
+
rb_define_method(cNetCDF,"enddef",NetCDF_enddef,0);
|
4513
|
+
rb_define_method(cNetCDF,"define_mode?",NetCDF_whether_in_define_mode,0);
|
4514
|
+
rb_define_method(cNetCDF,"fill",NetCDF_fill,1);
|
4515
|
+
rb_define_method(cNetCDF,"ndims",NetCDF_ndims,0);
|
4516
|
+
rb_define_method(cNetCDF,"nvars",NetCDF_nvars,0);
|
4517
|
+
rb_define_method(cNetCDF,"natts",NetCDF_natts,0);
|
4518
|
+
rb_define_method(cNetCDF,"sync",NetCDF_sync,0);
|
4519
|
+
rb_define_method(cNetCDF,"path",NetCDF_path,0);
|
4520
|
+
rb_define_method(cNetCDF,"dim",NetCDF_dim,1);
|
4521
|
+
rb_define_method(cNetCDF,"var",NetCDF_var,1);
|
4522
|
+
rb_define_method(cNetCDF,"att",NetCDF_att,1);
|
4523
|
+
rb_define_method(cNetCDF,"unlimited",NetCDF_unlimited,0);
|
4524
|
+
rb_define_private_method(cNetCDF,"id2var",NetCDF_id2var,1);
|
4525
|
+
rb_define_private_method(cNetCDF,"id2dim",NetCDF_id2dim,1);
|
4526
|
+
rb_define_private_method(cNetCDF,"id2att",NetCDF_id2att,1);
|
4527
|
+
rb_define_method(cNetCDF,"==",NetCDF_eql,1);
|
4528
|
+
/* rb_define_method(cNetCDF,"eql?",NetCDF_eql,1); */
|
4529
|
+
|
4530
|
+
/* The methods of the NetCDFDim class */
|
4531
|
+
rb_define_method(cNetCDFDim,"clone",NetCDF_dim_clone,0);
|
4532
|
+
rb_define_method(cNetCDFDim,"length",NetCDF_dim_length,0);
|
4533
|
+
rb_define_method(cNetCDFDim,"name=",NetCDF_dim_name,1);
|
4534
|
+
rb_define_method(cNetCDFDim,"name",NetCDF_dim_inqname,0);
|
4535
|
+
rb_define_method(cNetCDFDim,"unlimited?",NetCDF_dim_whether_unlimited,0);
|
4536
|
+
rb_define_method(cNetCDFDim,"==",NetCDF_dim_eql,1);
|
4537
|
+
/* rb_define_method(cNetCDFDim,"eql?",NetCDF_dim_eql,1); */
|
4538
|
+
|
4539
|
+
/* The methods of the NetCDFAtt class */
|
4540
|
+
rb_define_method(cNetCDFAtt,"clone",NetCDF_att_clone,0);
|
4541
|
+
rb_define_method(cNetCDFAtt,"name",NetCDF_att_inq_name,0);
|
4542
|
+
rb_define_method(cNetCDFAtt,"name=",NetCDF_att_rename,1);
|
4543
|
+
rb_define_method(cNetCDFAtt,"delete",NetCDF_att_delete,0);
|
4544
|
+
rb_define_method(cNetCDFAtt,"copy",NetCDF_att_copy,1);
|
4545
|
+
rb_define_method(cNetCDFAtt,"atttype",NetCDF_att_atttype,0);
|
4546
|
+
rb_define_method(cNetCDFAtt,"typecode",NetCDF_att_typecode,0);
|
4547
|
+
rb_define_method(cNetCDFAtt,"==",NetCDF_att_eql,1);
|
4548
|
+
/* rb_define_method(cNetCDFAtt,"eql?",NetCDF_att_eql,1); */
|
4549
|
+
rb_define_method(cNetCDFAtt,"putraw",NetCDF_att_put,2);
|
4550
|
+
rb_define_method(cNetCDFAtt,"get",NetCDF_att_get,0);
|
4551
|
+
|
4552
|
+
/* The methods of the NetCDFVar class */
|
4553
|
+
rb_define_method(cNetCDFVar,"clone",NetCDF_var_clone,0);
|
4554
|
+
rb_define_method(cNetCDFVar,"name",NetCDF_var_inq_name,0);
|
4555
|
+
rb_define_method(cNetCDFVar,"ndims",NetCDF_var_ndims,0);
|
4556
|
+
rb_define_method(cNetCDFVar,"vartype",NetCDF_var_vartype,0);
|
4557
|
+
rb_define_method(cNetCDFVar,"typecode",NetCDF_var_typecode,0);
|
4558
|
+
rb_define_method(cNetCDFVar,"ntype",NetCDF_var_vartype,0);
|
4559
|
+
rb_define_method(cNetCDFVar,"natts",NetCDF_var_natts,0);
|
4560
|
+
rb_define_method(cNetCDFVar,"file",NetCDF_var_file,0);
|
4561
|
+
rb_define_method(cNetCDFVar,"name=",NetCDF_var_rename,1);
|
4562
|
+
rb_define_method(cNetCDFVar,"att",NetCDF_var_att,1);
|
4563
|
+
rb_define_method(cNetCDFVar,"put_attraw",NetCDF_put_att_var,3);
|
4564
|
+
rb_define_method(cNetCDFVar,"dims",NetCDF_var_dims,0);
|
4565
|
+
rb_define_method(cNetCDFVar,"dim",NetCDF_var_dim,1);
|
4566
|
+
/*rb_define_private_method(cNetCDFVar,"id2dim",NetCDF_var_id2dim,1); */
|
4567
|
+
rb_define_private_method(cNetCDFVar,"id2att",NetCDF_var_id2att,1);
|
4568
|
+
rb_define_method(cNetCDFVar,"==",NetCDF_var_eql,1);
|
4569
|
+
/* rb_define_method(cNetCDFVar,"eql?",NetCDF_var_eql,1); */
|
4570
|
+
|
4571
|
+
/* The "get*" or "put*" methods in the NetCDFVar class */
|
4572
|
+
rb_define_method(cNetCDFVar,"put_var_char",NetCDF_put_var_char,1);
|
4573
|
+
rb_define_method(cNetCDFVar,"put_var_byte",NetCDF_put_var_byte,1);
|
4574
|
+
rb_define_method(cNetCDFVar,"put_var_sint",NetCDF_put_var_short,1);
|
4575
|
+
rb_define_method(cNetCDFVar,"put_var_int",NetCDF_put_var_int,1);
|
4576
|
+
rb_define_method(cNetCDFVar,"put_var_sfloat",NetCDF_put_var_float,1);
|
4577
|
+
rb_define_method(cNetCDFVar,"put_var_float",NetCDF_put_var_double,1);
|
4578
|
+
|
4579
|
+
rb_define_method(cNetCDFVar,"put_vars_char",NetCDF_put_vars_char,4);
|
4580
|
+
rb_define_method(cNetCDFVar,"put_vars_byte",NetCDF_put_vars_byte,4);
|
4581
|
+
rb_define_method(cNetCDFVar,"put_vars_sint",NetCDF_put_vars_sint,4);
|
4582
|
+
rb_define_method(cNetCDFVar,"put_vars_int",NetCDF_put_vars_int,4);
|
4583
|
+
rb_define_method(cNetCDFVar,"put_vars_sfloat",NetCDF_put_vars_float,4);
|
4584
|
+
rb_define_method(cNetCDFVar,"put_vars_float",NetCDF_put_vars_double,4);
|
4585
|
+
|
4586
|
+
rb_define_method(cNetCDFVar,"put_var1_char",NetCDF_put_var1_char,2);
|
4587
|
+
rb_define_method(cNetCDFVar,"put_var1_byte",NetCDF_put_var1_byte,2);
|
4588
|
+
rb_define_method(cNetCDFVar,"put_var1_sint",NetCDF_put_var1_sint,2);
|
4589
|
+
rb_define_method(cNetCDFVar,"put_var1_int",NetCDF_put_var1_int,2);
|
4590
|
+
rb_define_method(cNetCDFVar,"put_var1_sfloat",NetCDF_put_var1_float,2);
|
4591
|
+
rb_define_method(cNetCDFVar,"put_var1_float",NetCDF_put_var1_double,2);
|
4592
|
+
|
4593
|
+
rb_define_method(cNetCDFVar,"get_var_char",NetCDF_get_var_char,0);
|
4594
|
+
rb_define_method(cNetCDFVar,"get_var_byte",NetCDF_get_var_byte,0);
|
4595
|
+
rb_define_method(cNetCDFVar,"get_var_sint",NetCDF_get_var_sint,0);
|
4596
|
+
rb_define_method(cNetCDFVar,"get_var_int",NetCDF_get_var_int,0);
|
4597
|
+
rb_define_method(cNetCDFVar,"get_var_sfloat",NetCDF_get_var_float,0);
|
4598
|
+
rb_define_method(cNetCDFVar,"get_var_float",NetCDF_get_var_double,0);
|
4599
|
+
|
4600
|
+
rb_define_method(cNetCDFVar,"get_vars_char",NetCDF_get_vars_char,3);
|
4601
|
+
rb_define_method(cNetCDFVar,"get_vars_byte",NetCDF_get_vars_byte,3);
|
4602
|
+
rb_define_method(cNetCDFVar,"get_vars_sint",NetCDF_get_vars_sint,3);
|
4603
|
+
rb_define_method(cNetCDFVar,"get_vars_int",NetCDF_get_vars_int,3);
|
4604
|
+
rb_define_method(cNetCDFVar,"get_vars_sfloat",NetCDF_get_vars_float,3);
|
4605
|
+
rb_define_method(cNetCDFVar,"get_vars_float",NetCDF_get_vars_double,3);
|
4606
|
+
|
4607
|
+
rb_define_method(cNetCDFVar,"get_var1_char",NetCDF_get_var1_char,1);
|
4608
|
+
rb_define_method(cNetCDFVar,"get_var1_byte",NetCDF_get_var1_byte,1);
|
4609
|
+
rb_define_method(cNetCDFVar,"get_var1_sint",NetCDF_get_var1_sint,1);
|
4610
|
+
rb_define_method(cNetCDFVar,"get_var1_int",NetCDF_get_var1_int,1);
|
4611
|
+
rb_define_method(cNetCDFVar,"get_var1_sfloat",NetCDF_get_var1_float,1);
|
4612
|
+
rb_define_method(cNetCDFVar,"get_var1_float",NetCDF_get_var1_double,1);
|
4613
|
+
}
|