ruby-mpi 0.3.2 → 0.4.0
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- checksums.yaml +5 -5
- data/LICENSE.txt +1 -1
- data/README.rdoc +3 -4
- data/Rakefile +1 -1
- data/VERSION +1 -1
- data/ext/mpi/mpi.c +800 -7
- data/ruby-mpi.gemspec +30 -35
- data/samples/kmeans.rb +137 -0
- data/samples/pi.rb +59 -0
- data/spec/ruby-mpi_spec.rb +407 -14
- metadata +6 -5
data/ext/mpi/mpi.c
CHANGED
@@ -27,6 +27,10 @@
|
|
27
27
|
---->> Please define NA_MPI_LLINT manually because sizeof(long long) != 8. <<----
|
28
28
|
#endif
|
29
29
|
|
30
|
+
#ifndef NARRAY_BIGMEM
|
31
|
+
# define NA_LLINT -999
|
32
|
+
#endif
|
33
|
+
|
30
34
|
|
31
35
|
#define OBJ2C(rb_obj, len, buffer, typ, off) \
|
32
36
|
{\
|
@@ -313,6 +317,37 @@ rb_m_abort(VALUE self, VALUE rcomm, VALUE rerror)
|
|
313
317
|
return INT2NUM(ierror);
|
314
318
|
}
|
315
319
|
|
320
|
+
static VALUE
|
321
|
+
rb_m_wtime(VALUE self)
|
322
|
+
{
|
323
|
+
double time;
|
324
|
+
time = MPI_Wtime();
|
325
|
+
return rb_float_new(time);
|
326
|
+
}
|
327
|
+
|
328
|
+
static VALUE
|
329
|
+
rb_m_waitall(VALUE self, VALUE rary)
|
330
|
+
{
|
331
|
+
struct _Request *req;
|
332
|
+
MPI_Request *request;
|
333
|
+
MPI_Status *status;
|
334
|
+
VALUE rb_status;
|
335
|
+
long count, i;
|
336
|
+
|
337
|
+
count = RARRAY_LEN(rary);
|
338
|
+
|
339
|
+
request = ALLOCA_N(MPI_Request, count);
|
340
|
+
for (i=0; i<count; i++) {
|
341
|
+
Data_Get_Struct(rb_ary_entry(rary,i), struct _Request, req);
|
342
|
+
request[i] = req->Request;
|
343
|
+
}
|
344
|
+
rb_status = rb_ary_new2(count);
|
345
|
+
status = ALLOC_N(MPI_Status, count);
|
346
|
+
check_error(MPI_Waitall(count, request, status));
|
347
|
+
for (i=0; i<count; i++)
|
348
|
+
rb_ary_push(rb_status, Data_Wrap_Struct(cStatus, NULL, Status_free, &(status[i])));
|
349
|
+
return rb_status;
|
350
|
+
}
|
316
351
|
|
317
352
|
// MPI::Comm
|
318
353
|
/*
|
@@ -465,11 +500,124 @@ rb_comm_gather(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_root)
|
|
465
500
|
if (recvcount < sendcount*size)
|
466
501
|
rb_raise(rb_eArgError, "recvbuf is too small");
|
467
502
|
recvcount = sendcount;
|
503
|
+
} else {
|
504
|
+
recvtype = sendtype; // to avoid segmentation fault in an environment
|
468
505
|
}
|
469
506
|
check_error(MPI_Gather(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, root, comm->Comm));
|
470
507
|
return Qnil;
|
471
508
|
}
|
472
509
|
static VALUE
|
510
|
+
rb_comm_igather(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_root)
|
511
|
+
{
|
512
|
+
void *sendbuf, *recvbuf = NULL;
|
513
|
+
int sendcount=0, recvcount = 0;
|
514
|
+
MPI_Datatype sendtype, recvtype = 0;
|
515
|
+
int root, rank, size;
|
516
|
+
struct _Comm *comm;
|
517
|
+
struct _Request *request;
|
518
|
+
VALUE rb_request;
|
519
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
520
|
+
root = NUM2INT(rb_root);
|
521
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
522
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
523
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
524
|
+
if (rank == root) {
|
525
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
526
|
+
if (recvcount < sendcount*size)
|
527
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
528
|
+
recvcount = sendcount;
|
529
|
+
} else {
|
530
|
+
recvtype = sendtype; // to avoid segmentation fault in an environment
|
531
|
+
}
|
532
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
533
|
+
request->free = true;
|
534
|
+
check_error(MPI_Igather(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, root, comm->Comm, &(request->Request)));
|
535
|
+
return rb_request;
|
536
|
+
}
|
537
|
+
static VALUE
|
538
|
+
rb_comm_gatherv(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_displs, VALUE rb_root)
|
539
|
+
{
|
540
|
+
void *sendbuf, *recvbuf = NULL;
|
541
|
+
int sendcount=0, bufsize=0;
|
542
|
+
int *recvcounts = NULL, *displs = NULL;
|
543
|
+
MPI_Datatype sendtype, recvtype = 0;
|
544
|
+
int root, rank, size;
|
545
|
+
struct _Comm *comm;
|
546
|
+
int max, tmp;
|
547
|
+
int i;
|
548
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
549
|
+
root = NUM2INT(rb_root);
|
550
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
551
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
552
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
553
|
+
if (rank == root) {
|
554
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
555
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
556
|
+
if ( RARRAY_LEN(rb_displs) != size )
|
557
|
+
rb_raise(rb_eArgError, "length of displs must be the same as the group size");
|
558
|
+
recvcounts = ALLOCA_N(int, size);
|
559
|
+
displs = ALLOCA_N(int, size);
|
560
|
+
max = 0;
|
561
|
+
for (i=0; i<size; i++) {
|
562
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
563
|
+
displs[i] = NUM2INT(rb_ary_entry(rb_displs,i));
|
564
|
+
tmp = displs[i] + recvcounts[i];
|
565
|
+
if (tmp > max) max = tmp;
|
566
|
+
}
|
567
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
568
|
+
if (bufsize < max)
|
569
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
570
|
+
} else {
|
571
|
+
recvtype = sendtype; // to avoid segmentation fault in an environment
|
572
|
+
}
|
573
|
+
check_error(MPI_Gatherv(sendbuf, sendcount, sendtype, recvbuf, recvcounts, displs, recvtype, root, comm->Comm));
|
574
|
+
return Qnil;
|
575
|
+
}
|
576
|
+
static VALUE
|
577
|
+
rb_comm_igatherv(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_displs, VALUE rb_root)
|
578
|
+
{
|
579
|
+
void *sendbuf, *recvbuf = NULL;
|
580
|
+
int sendcount=0, bufsize=0;
|
581
|
+
int *recvcounts = NULL, *displs = NULL;
|
582
|
+
MPI_Datatype sendtype, recvtype = 0;
|
583
|
+
int root, rank, size;
|
584
|
+
struct _Comm *comm;
|
585
|
+
struct _Request *request;
|
586
|
+
VALUE rb_request;
|
587
|
+
int max, tmp;
|
588
|
+
int i;
|
589
|
+
|
590
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
591
|
+
root = NUM2INT(rb_root);
|
592
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
593
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
594
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
595
|
+
if (rank == root) {
|
596
|
+
recvcounts = ALLOCA_N(int, size);
|
597
|
+
displs = ALLOCA_N(int, size);
|
598
|
+
max = 0;
|
599
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
600
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
601
|
+
if ( RARRAY_LEN(rb_displs) != size )
|
602
|
+
rb_raise(rb_eArgError, "length of displs must be the same as the group size");
|
603
|
+
for (i=0; i<size; i++) {
|
604
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
605
|
+
displs[i] = NUM2INT(rb_ary_entry(rb_displs,i));
|
606
|
+
tmp = displs[i] + recvcounts[i];
|
607
|
+
if (tmp > max) max = tmp;
|
608
|
+
}
|
609
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
610
|
+
if (bufsize < max)
|
611
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
612
|
+
} else {
|
613
|
+
recvtype = sendtype; // to avoid segmentation fault in an environment
|
614
|
+
}
|
615
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
616
|
+
request->free = true;
|
617
|
+
check_error(MPI_Igatherv(sendbuf, sendcount, sendtype, recvbuf, recvcounts, displs, recvtype, root, comm->Comm, &(request->Request)));
|
618
|
+
return rb_request;
|
619
|
+
}
|
620
|
+
static VALUE
|
473
621
|
rb_comm_allgather(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf)
|
474
622
|
{
|
475
623
|
void *sendbuf, *recvbuf;
|
@@ -489,6 +637,105 @@ rb_comm_allgather(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf)
|
|
489
637
|
return Qnil;
|
490
638
|
}
|
491
639
|
static VALUE
|
640
|
+
rb_comm_iallgather(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf)
|
641
|
+
{
|
642
|
+
void *sendbuf, *recvbuf;
|
643
|
+
int sendcount=0, recvcount=0;
|
644
|
+
MPI_Datatype sendtype, recvtype;
|
645
|
+
int rank, size;
|
646
|
+
struct _Comm *comm;
|
647
|
+
struct _Request *request;
|
648
|
+
VALUE rb_request;
|
649
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
650
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
651
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
652
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
653
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
654
|
+
if (recvcount < sendcount*size)
|
655
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
656
|
+
recvcount = sendcount;
|
657
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
658
|
+
request->free = true;
|
659
|
+
check_error(MPI_Iallgather(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm->Comm, &(request->Request)));
|
660
|
+
return rb_request;
|
661
|
+
}
|
662
|
+
static VALUE
|
663
|
+
rb_comm_allgatherv(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_displs)
|
664
|
+
{
|
665
|
+
void *sendbuf, *recvbuf;
|
666
|
+
int sendcount=0, bufsize=0;
|
667
|
+
int *recvcounts, *displs;
|
668
|
+
MPI_Datatype sendtype, recvtype;
|
669
|
+
int rank, size;
|
670
|
+
struct _Comm *comm;
|
671
|
+
int max, tmp;
|
672
|
+
int i;
|
673
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
674
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
675
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
676
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
677
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
678
|
+
if ( RARRAY_LEN(rb_displs) != size )
|
679
|
+
rb_raise(rb_eArgError, "length of displs must be the same as the group size");
|
680
|
+
recvcounts = ALLOCA_N(int, size);
|
681
|
+
displs = ALLOCA_N(int, size);
|
682
|
+
max = 0;
|
683
|
+
for (i=0; i<size; i++) {
|
684
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
685
|
+
displs[i] = NUM2INT(rb_ary_entry(rb_displs,i));
|
686
|
+
tmp = displs[i] + recvcounts[i];
|
687
|
+
if (tmp > max) max = tmp;
|
688
|
+
}
|
689
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
690
|
+
if (sendcount != recvcounts[rank])
|
691
|
+
rb_raise(rb_eArgError, "length of sendbuf is not the same as recvcounts[rank]");
|
692
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
693
|
+
if (bufsize < max)
|
694
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
695
|
+
check_error(MPI_Allgatherv(sendbuf, sendcount, sendtype, recvbuf, recvcounts, displs, recvtype, comm->Comm));
|
696
|
+
return Qnil;
|
697
|
+
}
|
698
|
+
static VALUE
|
699
|
+
rb_comm_iallgatherv(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_displs)
|
700
|
+
{
|
701
|
+
void *sendbuf, *recvbuf;
|
702
|
+
int sendcount=0, bufsize=0;
|
703
|
+
int *recvcounts, *displs;
|
704
|
+
MPI_Datatype sendtype, recvtype;
|
705
|
+
int rank, size;
|
706
|
+
struct _Comm *comm;
|
707
|
+
struct _Request *request;
|
708
|
+
VALUE rb_request;
|
709
|
+
int max, tmp;
|
710
|
+
int i;
|
711
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
712
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
713
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
714
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
715
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
716
|
+
if ( RARRAY_LEN(rb_displs) != size )
|
717
|
+
rb_raise(rb_eArgError, "length of displs must be the same as the group size");
|
718
|
+
recvcounts = ALLOCA_N(int, size);
|
719
|
+
displs = ALLOCA_N(int, size);
|
720
|
+
max = 0;
|
721
|
+
for (i=0; i<size; i++) {
|
722
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
723
|
+
displs[i] = NUM2INT(rb_ary_entry(rb_displs,i));
|
724
|
+
tmp = displs[i] + recvcounts[i];
|
725
|
+
if (tmp > max) max = tmp;
|
726
|
+
}
|
727
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
728
|
+
if (sendcount != recvcounts[rank])
|
729
|
+
rb_raise(rb_eArgError, "length of sendbuf is not the same as recvcounts[rank]");
|
730
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
731
|
+
if (bufsize < max)
|
732
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
733
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
734
|
+
request->free = true;
|
735
|
+
check_error(MPI_Iallgatherv(sendbuf, sendcount, sendtype, recvbuf, recvcounts, displs, recvtype, comm->Comm, &(request->Request)));
|
736
|
+
return rb_request;
|
737
|
+
}
|
738
|
+
static VALUE
|
492
739
|
rb_comm_bcast(VALUE self, VALUE rb_buffer, VALUE rb_root)
|
493
740
|
{
|
494
741
|
void *buffer;
|
@@ -503,6 +750,24 @@ rb_comm_bcast(VALUE self, VALUE rb_buffer, VALUE rb_root)
|
|
503
750
|
return Qnil;
|
504
751
|
}
|
505
752
|
static VALUE
|
753
|
+
rb_comm_ibcast(VALUE self, VALUE rb_buffer, VALUE rb_root)
|
754
|
+
{
|
755
|
+
void *buffer;
|
756
|
+
int count=0;
|
757
|
+
MPI_Datatype type;
|
758
|
+
int root;
|
759
|
+
struct _Comm *comm;
|
760
|
+
struct _Request *request;
|
761
|
+
VALUE rb_request;
|
762
|
+
OBJ2C(rb_buffer, count, buffer, type, 0);
|
763
|
+
root = NUM2INT(rb_root);
|
764
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
765
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
766
|
+
request->free = true;
|
767
|
+
check_error(MPI_Ibcast(buffer, count, type, root, comm->Comm, &(request->Request)));
|
768
|
+
return rb_request;
|
769
|
+
}
|
770
|
+
static VALUE
|
506
771
|
rb_comm_scatter(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_root)
|
507
772
|
{
|
508
773
|
void *sendbuf = NULL, *recvbuf;
|
@@ -525,6 +790,110 @@ rb_comm_scatter(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_root)
|
|
525
790
|
return Qnil;
|
526
791
|
}
|
527
792
|
static VALUE
|
793
|
+
rb_comm_iscatter(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_root)
|
794
|
+
{
|
795
|
+
void *sendbuf = NULL, *recvbuf;
|
796
|
+
int sendcount = 0, recvcount=0;
|
797
|
+
MPI_Datatype sendtype = 0, recvtype;
|
798
|
+
int root, rank, size;
|
799
|
+
struct _Comm *comm;
|
800
|
+
struct _Request *request;
|
801
|
+
VALUE rb_request;
|
802
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
803
|
+
root = NUM2INT(rb_root);
|
804
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
805
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
806
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
807
|
+
if (rank == root) {
|
808
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
809
|
+
if (sendcount > recvcount*size)
|
810
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
811
|
+
sendcount = recvcount;
|
812
|
+
}
|
813
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
814
|
+
request->free = true;
|
815
|
+
check_error(MPI_Iscatter(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, root, comm->Comm, &(request->Request)));
|
816
|
+
return rb_request;
|
817
|
+
}
|
818
|
+
static VALUE
|
819
|
+
rb_comm_scatterv(VALUE self, VALUE rb_sendbuf, VALUE rb_sendcounts, VALUE rb_displs, VALUE rb_recvbuf, VALUE rb_root)
|
820
|
+
{
|
821
|
+
void *sendbuf = NULL, *recvbuf;
|
822
|
+
int recvcount = 0, bufsize=0;
|
823
|
+
int *sendcounts, *displs;
|
824
|
+
MPI_Datatype sendtype = 0, recvtype;
|
825
|
+
int root, rank, size;
|
826
|
+
struct _Comm *comm;
|
827
|
+
int max, tmp;
|
828
|
+
int i;
|
829
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
830
|
+
root = NUM2INT(rb_root);
|
831
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
832
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
833
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
834
|
+
if (rank == root) {
|
835
|
+
if ( RARRAY_LEN(rb_sendcounts) != size )
|
836
|
+
rb_raise(rb_eArgError, "length of sendcounts must be the same as the group size");
|
837
|
+
if ( RARRAY_LEN(rb_displs) != size )
|
838
|
+
rb_raise(rb_eArgError, "length of displs must be the same as the group size");
|
839
|
+
sendcounts = ALLOCA_N(int, size);
|
840
|
+
displs = ALLOCA_N(int, size);
|
841
|
+
max = 0;
|
842
|
+
for (i=0; i<size; i++) {
|
843
|
+
sendcounts[i] = NUM2INT(rb_ary_entry(rb_sendcounts,i));
|
844
|
+
displs[i] = NUM2INT(rb_ary_entry(rb_displs,i));
|
845
|
+
tmp = displs[i] + sendcounts[i];
|
846
|
+
if (tmp > max) max = tmp;
|
847
|
+
}
|
848
|
+
OBJ2C(rb_sendbuf, bufsize, sendbuf, sendtype, 0);
|
849
|
+
if (bufsize < max)
|
850
|
+
rb_raise(rb_eArgError, "sendbuf is too small");
|
851
|
+
}
|
852
|
+
check_error(MPI_Scatterv(sendbuf, sendcounts, displs, sendtype, recvbuf, recvcount, recvtype, root, comm->Comm));
|
853
|
+
return Qnil;
|
854
|
+
}
|
855
|
+
static VALUE
|
856
|
+
rb_comm_iscatterv(VALUE self, VALUE rb_sendbuf, VALUE rb_sendcounts, VALUE rb_displs, VALUE rb_recvbuf, VALUE rb_root)
|
857
|
+
{
|
858
|
+
void *sendbuf = NULL, *recvbuf;
|
859
|
+
int recvcount = 0, bufsize=0;
|
860
|
+
int *sendcounts, *displs;
|
861
|
+
MPI_Datatype sendtype = 0, recvtype;
|
862
|
+
int root, rank, size;
|
863
|
+
struct _Comm *comm;
|
864
|
+
struct _Request *request;
|
865
|
+
VALUE rb_request;
|
866
|
+
int max, tmp;
|
867
|
+
int i;
|
868
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
869
|
+
root = NUM2INT(rb_root);
|
870
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
871
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
872
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
873
|
+
if (rank == root) {
|
874
|
+
if ( RARRAY_LEN(rb_sendcounts) != size )
|
875
|
+
rb_raise(rb_eArgError, "length of sendcounts must be the same as the group size");
|
876
|
+
if ( RARRAY_LEN(rb_displs) != size )
|
877
|
+
rb_raise(rb_eArgError, "length of displs must be the same as the group size");
|
878
|
+
sendcounts = ALLOCA_N(int, size);
|
879
|
+
displs = ALLOCA_N(int, size);
|
880
|
+
max = 0;
|
881
|
+
for (i=0; i<size; i++) {
|
882
|
+
sendcounts[i] = NUM2INT(rb_ary_entry(rb_sendcounts,i));
|
883
|
+
displs[i] = NUM2INT(rb_ary_entry(rb_displs,i));
|
884
|
+
tmp = displs[i] + sendcounts[i];
|
885
|
+
if (tmp > max) max = tmp;
|
886
|
+
}
|
887
|
+
OBJ2C(rb_sendbuf, bufsize, sendbuf, sendtype, 0);
|
888
|
+
if (bufsize < max)
|
889
|
+
rb_raise(rb_eArgError, "sendbuf is too small");
|
890
|
+
}
|
891
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
892
|
+
request->free = true;
|
893
|
+
check_error(MPI_Iscatterv(sendbuf, sendcounts, displs, sendtype, recvbuf, recvcount, recvtype, root, comm->Comm, &(request->Request)));
|
894
|
+
return rb_request;
|
895
|
+
}
|
896
|
+
static VALUE
|
528
897
|
rb_comm_sendrecv(VALUE self, VALUE rb_sendbuf, VALUE rb_dest, VALUE rb_sendtag, VALUE rb_recvbuf, VALUE rb_source, VALUE rb_recvtag)
|
529
898
|
{
|
530
899
|
void *sendbuf, *recvbuf;
|
@@ -567,6 +936,129 @@ rb_comm_alltoall(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf)
|
|
567
936
|
return Qnil;
|
568
937
|
}
|
569
938
|
static VALUE
|
939
|
+
rb_comm_ialltoall(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf)
|
940
|
+
{
|
941
|
+
void *sendbuf, *recvbuf;
|
942
|
+
int sendcount=0, recvcount=0;
|
943
|
+
MPI_Datatype sendtype, recvtype;
|
944
|
+
int size;
|
945
|
+
struct _Comm *comm;
|
946
|
+
struct _Request *request;
|
947
|
+
VALUE rb_request;
|
948
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
949
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
950
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
951
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
952
|
+
if (recvcount < sendcount)
|
953
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
954
|
+
recvcount = recvcount/size;
|
955
|
+
sendcount = sendcount/size;
|
956
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
957
|
+
request->free = true;
|
958
|
+
check_error(MPI_Ialltoall(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm->Comm, &(request->Request)));
|
959
|
+
return rb_request;
|
960
|
+
}
|
961
|
+
static VALUE
|
962
|
+
rb_comm_alltoallv(VALUE self, VALUE rb_sendbuf, VALUE rb_sendcounts, VALUE rb_sdispls, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_rdispls)
|
963
|
+
{
|
964
|
+
void *sendbuf, *recvbuf;
|
965
|
+
int bufsize=0;
|
966
|
+
int *sendcounts, *sdispls;
|
967
|
+
int *recvcounts, *rdispls;
|
968
|
+
MPI_Datatype sendtype, recvtype;
|
969
|
+
int size;
|
970
|
+
struct _Comm *comm;
|
971
|
+
int smax, rmax, tmp;
|
972
|
+
int i;
|
973
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
974
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
975
|
+
if ( RARRAY_LEN(rb_sendcounts) != size )
|
976
|
+
rb_raise(rb_eArgError, "length of sendcounts must be the same as the group size");
|
977
|
+
if ( RARRAY_LEN(rb_sdispls) != size )
|
978
|
+
rb_raise(rb_eArgError, "length of sdispls must be the same as the group size");
|
979
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
980
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
981
|
+
if ( RARRAY_LEN(rb_rdispls) != size )
|
982
|
+
rb_raise(rb_eArgError, "length of rdispls must be the same as the group size");
|
983
|
+
sendcounts = ALLOCA_N(int, size);
|
984
|
+
sdispls = ALLOCA_N(int, size);
|
985
|
+
recvcounts = ALLOCA_N(int, size);
|
986
|
+
rdispls = ALLOCA_N(int, size);
|
987
|
+
smax = 0;
|
988
|
+
rmax = 0;
|
989
|
+
for (i=0; i<size; i++) {
|
990
|
+
sendcounts[i] = NUM2INT(rb_ary_entry(rb_sendcounts,i));
|
991
|
+
sdispls[i] = NUM2INT(rb_ary_entry(rb_sdispls,i));
|
992
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
993
|
+
rdispls[i] = NUM2INT(rb_ary_entry(rb_rdispls,i));
|
994
|
+
tmp = sdispls[i] + sendcounts[i];
|
995
|
+
if(tmp > smax) smax = tmp;
|
996
|
+
tmp = rdispls[i] + recvcounts[i];
|
997
|
+
if(tmp > rmax) rmax = tmp;
|
998
|
+
}
|
999
|
+
OBJ2C(rb_sendbuf, bufsize, sendbuf, sendtype, 0);
|
1000
|
+
if (bufsize < smax)
|
1001
|
+
rb_raise(rb_eArgError, "sendbuf is too small");
|
1002
|
+
bufsize = 0;
|
1003
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
1004
|
+
if (bufsize < rmax)
|
1005
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
1006
|
+
check_error(MPI_Alltoallv(sendbuf, sendcounts, sdispls, sendtype, recvbuf, recvcounts, rdispls, recvtype, comm->Comm));
|
1007
|
+
return Qnil;
|
1008
|
+
}
|
1009
|
+
static VALUE
|
1010
|
+
rb_comm_ialltoallv(VALUE self, VALUE rb_sendbuf, VALUE rb_sendcounts, VALUE rb_sdispls, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_rdispls)
|
1011
|
+
{
|
1012
|
+
void *sendbuf, *recvbuf;
|
1013
|
+
int bufsize=0;
|
1014
|
+
int *sendcounts, *sdispls;
|
1015
|
+
int *recvcounts, *rdispls;
|
1016
|
+
MPI_Datatype sendtype, recvtype;
|
1017
|
+
int size;
|
1018
|
+
struct _Comm *comm;
|
1019
|
+
struct _Request *request;
|
1020
|
+
VALUE rb_request;
|
1021
|
+
int smax, rmax, tmp;
|
1022
|
+
int i;
|
1023
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1024
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1025
|
+
if ( RARRAY_LEN(rb_sendcounts) != size )
|
1026
|
+
rb_raise(rb_eArgError, "length of sendcounts must be the same as the group size");
|
1027
|
+
if ( RARRAY_LEN(rb_sdispls) != size )
|
1028
|
+
rb_raise(rb_eArgError, "length of sdispls must be the same as the group size");
|
1029
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
1030
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
1031
|
+
if ( RARRAY_LEN(rb_rdispls) != size )
|
1032
|
+
rb_raise(rb_eArgError, "length of rdispls must be the same as the group size");
|
1033
|
+
sendcounts = ALLOCA_N(int, size);
|
1034
|
+
sdispls = ALLOCA_N(int, size);
|
1035
|
+
recvcounts = ALLOCA_N(int, size);
|
1036
|
+
rdispls = ALLOCA_N(int, size);
|
1037
|
+
smax = 0;
|
1038
|
+
rmax = 0;
|
1039
|
+
for (i=0; i<size; i++) {
|
1040
|
+
sendcounts[i] = NUM2INT(rb_ary_entry(rb_sendcounts,i));
|
1041
|
+
sdispls[i] = NUM2INT(rb_ary_entry(rb_sdispls,i));
|
1042
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
1043
|
+
rdispls[i] = NUM2INT(rb_ary_entry(rb_rdispls,i));
|
1044
|
+
tmp = sdispls[i] + sendcounts[i];
|
1045
|
+
if(tmp > smax) smax = tmp;
|
1046
|
+
tmp = rdispls[i] + recvcounts[i];
|
1047
|
+
if(tmp > rmax) rmax = tmp;
|
1048
|
+
}
|
1049
|
+
OBJ2C(rb_sendbuf, bufsize, sendbuf, sendtype, 0);
|
1050
|
+
if (bufsize < smax)
|
1051
|
+
rb_raise(rb_eArgError, "sendbuf is too small");
|
1052
|
+
bufsize = 0;
|
1053
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
1054
|
+
if (bufsize < rmax)
|
1055
|
+
rb_raise(rb_eArgError, "recvbuf is too small");
|
1056
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1057
|
+
request->free = true;
|
1058
|
+
check_error(MPI_Ialltoallv(sendbuf, sendcounts, sdispls, sendtype, recvbuf, recvcounts, rdispls, recvtype, comm->Comm, &(request->Request)));
|
1059
|
+
return rb_request;
|
1060
|
+
}
|
1061
|
+
static VALUE
|
570
1062
|
rb_comm_reduce(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op, VALUE rb_root)
|
571
1063
|
{
|
572
1064
|
void *sendbuf, *recvbuf = NULL;
|
@@ -583,15 +1075,248 @@ rb_comm_reduce(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op, VALU
|
|
583
1075
|
if (rank == root) {
|
584
1076
|
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
585
1077
|
if (recvcount != sendcount)
|
586
|
-
rb_raise(rb_eArgError, "sendbuf and recvbuf
|
1078
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
587
1079
|
if (recvtype != sendtype)
|
588
|
-
rb_raise(rb_eArgError, "sendbuf and recvbuf
|
1080
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
589
1081
|
}
|
590
1082
|
Data_Get_Struct(rb_op, struct _Op, op);
|
591
1083
|
check_error(MPI_Reduce(sendbuf, recvbuf, sendcount, sendtype, op->Op, root, comm->Comm));
|
592
1084
|
return Qnil;
|
593
1085
|
}
|
594
1086
|
static VALUE
|
1087
|
+
rb_comm_ireduce(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op, VALUE rb_root)
|
1088
|
+
{
|
1089
|
+
void *sendbuf, *recvbuf = NULL;
|
1090
|
+
int sendcount=0, recvcount = 0;
|
1091
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1092
|
+
int root, rank, size;
|
1093
|
+
struct _Comm *comm;
|
1094
|
+
struct _Op *op;
|
1095
|
+
struct _Request *request;
|
1096
|
+
VALUE rb_request;
|
1097
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1098
|
+
root = NUM2INT(rb_root);
|
1099
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1100
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
1101
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1102
|
+
if (rank == root) {
|
1103
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1104
|
+
if (recvcount != sendcount)
|
1105
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
1106
|
+
if (recvtype != sendtype)
|
1107
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1108
|
+
}
|
1109
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1110
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1111
|
+
request->free = true;
|
1112
|
+
check_error(MPI_Ireduce(sendbuf, recvbuf, sendcount, sendtype, op->Op, root, comm->Comm, &(request->Request)));
|
1113
|
+
return rb_request;
|
1114
|
+
}
|
1115
|
+
static VALUE
|
1116
|
+
rb_comm_reduce_scatter(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_op)
|
1117
|
+
{
|
1118
|
+
void *sendbuf, *recvbuf = NULL;
|
1119
|
+
int sendcount=0, bufsize = 0;
|
1120
|
+
int *recvcounts;
|
1121
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1122
|
+
int rank, size;
|
1123
|
+
struct _Comm *comm;
|
1124
|
+
struct _Op *op;
|
1125
|
+
int i;
|
1126
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1127
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
1128
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1129
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
1130
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
1131
|
+
recvcounts = ALLOCA_N(int, size);
|
1132
|
+
sendcount = 0;
|
1133
|
+
for (i=0; i<size; i++) {
|
1134
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
1135
|
+
sendcount += recvcounts[i];
|
1136
|
+
}
|
1137
|
+
OBJ2C(rb_sendbuf, bufsize, sendbuf, sendtype, 0);
|
1138
|
+
if (bufsize != sendcount)
|
1139
|
+
rb_raise(rb_eArgError, "length of sendbuf and total of recvcounts must be the same");
|
1140
|
+
bufsize = 0;
|
1141
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
1142
|
+
if (bufsize != recvcounts[rank])
|
1143
|
+
rb_raise(rb_eArgError, "length of recvbuf and recvcounts[myrank] must by the same");
|
1144
|
+
if (recvtype != sendtype)
|
1145
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1146
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1147
|
+
check_error(MPI_Reduce_scatter(sendbuf, recvbuf, recvcounts, sendtype, op->Op, comm->Comm));
|
1148
|
+
return Qnil;
|
1149
|
+
}
|
1150
|
+
static VALUE
|
1151
|
+
rb_comm_ireduce_scatter(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_recvcounts, VALUE rb_op)
|
1152
|
+
{
|
1153
|
+
void *sendbuf, *recvbuf = NULL;
|
1154
|
+
int sendcount=0, bufsize = 0;
|
1155
|
+
int *recvcounts;
|
1156
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1157
|
+
int rank, size;
|
1158
|
+
struct _Comm *comm;
|
1159
|
+
struct _Op *op;
|
1160
|
+
struct _Request *request;
|
1161
|
+
VALUE rb_request;
|
1162
|
+
int i;
|
1163
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1164
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
1165
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1166
|
+
if ( RARRAY_LEN(rb_recvcounts) != size )
|
1167
|
+
rb_raise(rb_eArgError, "length of recvcounts must be the same as the group size");
|
1168
|
+
recvcounts = ALLOCA_N(int, size);
|
1169
|
+
sendcount = 0;
|
1170
|
+
for (i=0; i<size; i++) {
|
1171
|
+
recvcounts[i] = NUM2INT(rb_ary_entry(rb_recvcounts,i));
|
1172
|
+
sendcount += recvcounts[i];
|
1173
|
+
}
|
1174
|
+
OBJ2C(rb_sendbuf, bufsize, sendbuf, sendtype, 0);
|
1175
|
+
if (bufsize != sendcount)
|
1176
|
+
rb_raise(rb_eArgError, "length of sendbuf and total of recvcounts must be the same");
|
1177
|
+
bufsize = 0;
|
1178
|
+
OBJ2C(rb_recvbuf, bufsize, recvbuf, recvtype, 0);
|
1179
|
+
if (bufsize != recvcounts[rank])
|
1180
|
+
rb_raise(rb_eArgError, "length of recvbuf and recvcounts[myrank] must by the same");
|
1181
|
+
if (recvtype != sendtype)
|
1182
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1183
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1184
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1185
|
+
request->free = true;
|
1186
|
+
check_error(MPI_Ireduce_scatter(sendbuf, recvbuf, recvcounts, sendtype, op->Op, comm->Comm, &(request->Request)));
|
1187
|
+
return rb_request;
|
1188
|
+
}
|
1189
|
+
static VALUE
|
1190
|
+
rb_comm_reduce_scatter_block(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1191
|
+
{
|
1192
|
+
void *sendbuf, *recvbuf = NULL;
|
1193
|
+
int sendcount=0, recvcount = 0;
|
1194
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1195
|
+
int size;
|
1196
|
+
struct _Comm *comm;
|
1197
|
+
struct _Op *op;
|
1198
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1199
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1200
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1201
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1202
|
+
if (sendcount != recvcount*size)
|
1203
|
+
rb_raise(rb_eArgError, "length of sendbuf must be length of recvbuf times rank size");
|
1204
|
+
if (recvtype != sendtype)
|
1205
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1206
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1207
|
+
check_error(MPI_Reduce_scatter_block(sendbuf, recvbuf, recvcount, sendtype, op->Op, comm->Comm));
|
1208
|
+
return Qnil;
|
1209
|
+
}
|
1210
|
+
static VALUE
|
1211
|
+
rb_comm_ireduce_scatter_block(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1212
|
+
{
|
1213
|
+
void *sendbuf, *recvbuf = NULL;
|
1214
|
+
int sendcount=0, recvcount = 0;
|
1215
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1216
|
+
int size;
|
1217
|
+
struct _Comm *comm;
|
1218
|
+
struct _Op *op;
|
1219
|
+
struct _Request *request;
|
1220
|
+
VALUE rb_request;
|
1221
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1222
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1223
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1224
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1225
|
+
if (sendcount != recvcount*size)
|
1226
|
+
rb_raise(rb_eArgError, "length of sendbuf must be length of recvbuf times rank size");
|
1227
|
+
if (recvtype != sendtype)
|
1228
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1229
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1230
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1231
|
+
request->free = true;
|
1232
|
+
check_error(MPI_Ireduce_scatter_block(sendbuf, recvbuf, recvcount, sendtype, op->Op, comm->Comm, &(request->Request)));
|
1233
|
+
return rb_request;
|
1234
|
+
}
|
1235
|
+
static VALUE
|
1236
|
+
rb_comm_scan(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1237
|
+
{
|
1238
|
+
void *sendbuf, *recvbuf = NULL;
|
1239
|
+
int sendcount=0, recvcount = 0;
|
1240
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1241
|
+
struct _Comm *comm;
|
1242
|
+
struct _Op *op;
|
1243
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1244
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1245
|
+
if (sendcount != recvcount)
|
1246
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
1247
|
+
if (recvtype != sendtype)
|
1248
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1249
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1250
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1251
|
+
check_error(MPI_Scan(sendbuf, recvbuf, recvcount, sendtype, op->Op, comm->Comm));
|
1252
|
+
return Qnil;
|
1253
|
+
}
|
1254
|
+
static VALUE
|
1255
|
+
rb_comm_iscan(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1256
|
+
{
|
1257
|
+
void *sendbuf, *recvbuf = NULL;
|
1258
|
+
int sendcount=0, recvcount = 0;
|
1259
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1260
|
+
struct _Comm *comm;
|
1261
|
+
struct _Op *op;
|
1262
|
+
struct _Request *request;
|
1263
|
+
VALUE rb_request;
|
1264
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1265
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1266
|
+
if (sendcount != recvcount)
|
1267
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
1268
|
+
if (recvtype != sendtype)
|
1269
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1270
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1271
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1272
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1273
|
+
request->free = true;
|
1274
|
+
check_error(MPI_Iscan(sendbuf, recvbuf, recvcount, sendtype, op->Op, comm->Comm, &(request->Request)));
|
1275
|
+
return rb_request;
|
1276
|
+
}
|
1277
|
+
static VALUE
|
1278
|
+
rb_comm_exscan(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1279
|
+
{
|
1280
|
+
void *sendbuf, *recvbuf = NULL;
|
1281
|
+
int sendcount=0, recvcount = 0;
|
1282
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1283
|
+
struct _Comm *comm;
|
1284
|
+
struct _Op *op;
|
1285
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1286
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1287
|
+
if (sendcount != recvcount)
|
1288
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
1289
|
+
if (recvtype != sendtype)
|
1290
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1291
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1292
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1293
|
+
check_error(MPI_Exscan(sendbuf, recvbuf, recvcount, sendtype, op->Op, comm->Comm));
|
1294
|
+
return Qnil;
|
1295
|
+
}
|
1296
|
+
static VALUE
|
1297
|
+
rb_comm_iexscan(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1298
|
+
{
|
1299
|
+
void *sendbuf, *recvbuf = NULL;
|
1300
|
+
int sendcount=0, recvcount = 0;
|
1301
|
+
MPI_Datatype sendtype, recvtype = 0;
|
1302
|
+
struct _Comm *comm;
|
1303
|
+
struct _Op *op;
|
1304
|
+
struct _Request *request;
|
1305
|
+
VALUE rb_request;
|
1306
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1307
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1308
|
+
if (sendcount != recvcount)
|
1309
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
1310
|
+
if (recvtype != sendtype)
|
1311
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1312
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1313
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1314
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1315
|
+
request->free = true;
|
1316
|
+
check_error(MPI_Iexscan(sendbuf, recvbuf, recvcount, sendtype, op->Op, comm->Comm, &(request->Request)));
|
1317
|
+
return rb_request;
|
1318
|
+
}
|
1319
|
+
static VALUE
|
595
1320
|
rb_comm_allreduce(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
596
1321
|
{
|
597
1322
|
void *sendbuf, *recvbuf;
|
@@ -606,14 +1331,40 @@ rb_comm_allreduce(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
|
606
1331
|
check_error(MPI_Comm_size(comm->Comm, &size));
|
607
1332
|
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
608
1333
|
if (recvcount != sendcount)
|
609
|
-
rb_raise(rb_eArgError, "sendbuf and recvbuf
|
1334
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
610
1335
|
if (recvtype != sendtype)
|
611
|
-
rb_raise(rb_eArgError, "sendbuf and recvbuf
|
1336
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
612
1337
|
Data_Get_Struct(rb_op, struct _Op, op);
|
613
1338
|
check_error(MPI_Allreduce(sendbuf, recvbuf, recvcount, recvtype, op->Op, comm->Comm));
|
614
1339
|
return Qnil;
|
615
1340
|
}
|
616
1341
|
static VALUE
|
1342
|
+
rb_comm_iallreduce(VALUE self, VALUE rb_sendbuf, VALUE rb_recvbuf, VALUE rb_op)
|
1343
|
+
{
|
1344
|
+
void *sendbuf, *recvbuf;
|
1345
|
+
int sendcount=0, recvcount=0;
|
1346
|
+
MPI_Datatype sendtype, recvtype;
|
1347
|
+
int rank, size;
|
1348
|
+
struct _Comm *comm;
|
1349
|
+
struct _Op *op;
|
1350
|
+
struct _Request *request;
|
1351
|
+
VALUE rb_request;
|
1352
|
+
OBJ2C(rb_sendbuf, sendcount, sendbuf, sendtype, 0);
|
1353
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1354
|
+
check_error(MPI_Comm_rank(comm->Comm, &rank));
|
1355
|
+
check_error(MPI_Comm_size(comm->Comm, &size));
|
1356
|
+
OBJ2C(rb_recvbuf, recvcount, recvbuf, recvtype, 0);
|
1357
|
+
if (recvcount != sendcount)
|
1358
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same length");
|
1359
|
+
if (recvtype != sendtype)
|
1360
|
+
rb_raise(rb_eArgError, "sendbuf and recvbuf must have the same type");
|
1361
|
+
Data_Get_Struct(rb_op, struct _Op, op);
|
1362
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1363
|
+
request->free = true;
|
1364
|
+
check_error(MPI_Iallreduce(sendbuf, recvbuf, recvcount, recvtype, op->Op, comm->Comm, &(request->Request)));
|
1365
|
+
return rb_request;
|
1366
|
+
}
|
1367
|
+
static VALUE
|
617
1368
|
rb_comm_get_Errhandler(VALUE self)
|
618
1369
|
{
|
619
1370
|
struct _Comm *comm;
|
@@ -643,7 +1394,19 @@ rb_comm_barrier(VALUE self)
|
|
643
1394
|
struct _Comm *comm;
|
644
1395
|
Data_Get_Struct(self, struct _Comm, comm);
|
645
1396
|
check_error(MPI_Barrier(comm->Comm));
|
646
|
-
return
|
1397
|
+
return Qnil;
|
1398
|
+
}
|
1399
|
+
static VALUE
|
1400
|
+
rb_comm_ibarrier(VALUE self)
|
1401
|
+
{
|
1402
|
+
struct _Comm *comm;
|
1403
|
+
struct _Request *request;
|
1404
|
+
VALUE rb_request;
|
1405
|
+
Data_Get_Struct(self, struct _Comm, comm);
|
1406
|
+
rb_request = Data_Make_Struct(cRequest, struct _Request, NULL, Request_free, request);
|
1407
|
+
request->free = true;
|
1408
|
+
check_error(MPI_Ibarrier(comm->Comm, &(request->Request)));
|
1409
|
+
return rb_request;
|
647
1410
|
}
|
648
1411
|
|
649
1412
|
// MPI::Request
|
@@ -698,8 +1461,10 @@ void Init_mpi()
|
|
698
1461
|
// MPI
|
699
1462
|
mMPI = rb_define_module("MPI");
|
700
1463
|
rb_define_module_function(mMPI, "Init", rb_m_init, -1);
|
701
|
-
rb_define_module_function(mMPI, "Finalize", rb_m_finalize,
|
1464
|
+
rb_define_module_function(mMPI, "Finalize", rb_m_finalize, 0);
|
702
1465
|
rb_define_module_function(mMPI, "Abort", rb_m_abort, 2);
|
1466
|
+
rb_define_module_function(mMPI, "Wtime", rb_m_wtime, 0);
|
1467
|
+
rb_define_module_function(mMPI, "Waitall", rb_m_waitall, 1);
|
703
1468
|
rb_define_const(mMPI, "VERSION", INT2NUM(MPI_VERSION));
|
704
1469
|
rb_define_const(mMPI, "SUBVERSION", INT2NUM(MPI_SUBVERSION));
|
705
1470
|
rb_define_const(mMPI, "SUCCESS", INT2NUM(MPI_SUCCESS));
|
@@ -710,22 +1475,50 @@ void Init_mpi()
|
|
710
1475
|
// rb_define_alloc_func(cComm, rb_comm_alloc);
|
711
1476
|
rb_define_private_method(cComm, "initialize", rb_comm_initialize, 0);
|
712
1477
|
rb_define_method(cComm, "rank", rb_comm_rank, 0);
|
1478
|
+
rb_define_method(cComm, "Rank", rb_comm_rank, 0);
|
713
1479
|
rb_define_method(cComm, "size", rb_comm_size, 0);
|
1480
|
+
rb_define_method(cComm, "Size", rb_comm_size, 0);
|
714
1481
|
rb_define_method(cComm, "Send", rb_comm_send, 3);
|
715
1482
|
rb_define_method(cComm, "Isend", rb_comm_isend, 3);
|
716
1483
|
rb_define_method(cComm, "Recv", rb_comm_recv, -1);
|
717
1484
|
rb_define_method(cComm, "Irecv", rb_comm_irecv, -1);
|
718
1485
|
rb_define_method(cComm, "Gather", rb_comm_gather, 3);
|
1486
|
+
rb_define_method(cComm, "Igather", rb_comm_igather, 3);
|
1487
|
+
rb_define_method(cComm, "Gatherv", rb_comm_gatherv, 5);
|
1488
|
+
rb_define_method(cComm, "Igatherv", rb_comm_igatherv, 5);
|
719
1489
|
rb_define_method(cComm, "Allgather", rb_comm_allgather, 2);
|
1490
|
+
rb_define_method(cComm, "Iallgather", rb_comm_iallgather, 2);
|
1491
|
+
rb_define_method(cComm, "Allgatherv", rb_comm_allgatherv, 4);
|
1492
|
+
rb_define_method(cComm, "Iallgatherv", rb_comm_iallgatherv, 4);
|
720
1493
|
rb_define_method(cComm, "Bcast", rb_comm_bcast, 2);
|
1494
|
+
rb_define_method(cComm, "Ibcast", rb_comm_ibcast, 2);
|
721
1495
|
rb_define_method(cComm, "Scatter", rb_comm_scatter, 3);
|
1496
|
+
rb_define_method(cComm, "Iscatter", rb_comm_iscatter, 3);
|
1497
|
+
rb_define_method(cComm, "Scatterv", rb_comm_scatterv, 5);
|
1498
|
+
rb_define_method(cComm, "Iscatterv", rb_comm_iscatterv, 5);
|
722
1499
|
rb_define_method(cComm, "Sendrecv", rb_comm_sendrecv, 6);
|
723
1500
|
rb_define_method(cComm, "Alltoall", rb_comm_alltoall, 2);
|
1501
|
+
rb_define_method(cComm, "Ialltoall", rb_comm_ialltoall, 2);
|
1502
|
+
rb_define_method(cComm, "Alltoallv", rb_comm_alltoallv, 6);
|
1503
|
+
rb_define_method(cComm, "Ialltoallv", rb_comm_ialltoallv, 6);
|
1504
|
+
// rb_define_method(cComm, "Alltoallw", rb_comm_alltoallw, 2);
|
1505
|
+
// rb_define_method(cComm, "Ialltoallw", rb_comm_ialltoallw, 2);
|
724
1506
|
rb_define_method(cComm, "Reduce", rb_comm_reduce, 4);
|
1507
|
+
rb_define_method(cComm, "Ireduce", rb_comm_ireduce, 4);
|
1508
|
+
rb_define_method(cComm, "Reduce_scatter", rb_comm_reduce_scatter, 4);
|
1509
|
+
rb_define_method(cComm, "Ireduce_scatter", rb_comm_ireduce_scatter, 4);
|
1510
|
+
rb_define_method(cComm, "Reduce_scatter_block", rb_comm_reduce_scatter_block, 3);
|
1511
|
+
rb_define_method(cComm, "Ireduce_scatter_block", rb_comm_ireduce_scatter_block, 3);
|
1512
|
+
rb_define_method(cComm, "Scan", rb_comm_scan, 3);
|
1513
|
+
rb_define_method(cComm, "Iscan", rb_comm_iscan, 3);
|
1514
|
+
rb_define_method(cComm, "Exscan", rb_comm_exscan, 3);
|
1515
|
+
rb_define_method(cComm, "Iexscan", rb_comm_iexscan, 3);
|
725
1516
|
rb_define_method(cComm, "Allreduce", rb_comm_allreduce, 3);
|
1517
|
+
rb_define_method(cComm, "Iallreduce", rb_comm_iallreduce, 3);
|
1518
|
+
rb_define_method(cComm, "Barrier", rb_comm_barrier, 0);
|
1519
|
+
rb_define_method(cComm, "Ibarrier", rb_comm_ibarrier, 0);
|
726
1520
|
rb_define_method(cComm, "Errhandler", rb_comm_get_Errhandler, 0);
|
727
1521
|
rb_define_method(cComm, "Errhandler=", rb_comm_set_Errhandler, 1);
|
728
|
-
rb_define_method(cComm, "Barrier", rb_comm_barrier, 0);
|
729
1522
|
|
730
1523
|
// MPI::Request
|
731
1524
|
cRequest = rb_define_class_under(mMPI, "Request", rb_cObject);
|