ruby-hl7 1.2.3 → 1.3.0

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Files changed (53) hide show
  1. checksums.yaml +4 -4
  2. data/.gitignore +7 -0
  3. data/.rubocop.yml +127 -0
  4. data/.travis.yml +20 -0
  5. data/Gemfile +3 -0
  6. data/Gemfile.lock +58 -0
  7. data/NOTES.md +121 -0
  8. data/README.rdoc +5 -0
  9. data/Rakefile +77 -0
  10. data/VERSION +1 -0
  11. data/VERSION.yml +4 -0
  12. data/examples/proxy_server.rb +26 -0
  13. data/lib/ruby-hl7.rb +1 -1
  14. data/lib/segments/pid.rb +13 -1
  15. data/ruby-hl7.gemspec +38 -0
  16. data/spec/ail_segment_spec.rb +28 -0
  17. data/spec/aip_segment_spec.rb +31 -0
  18. data/spec/basic_parsing_spec.rb +319 -0
  19. data/spec/batch_parsing_spec.rb +52 -0
  20. data/spec/child_segment_spec.rb +66 -0
  21. data/spec/core_ext/date_time_spec.rb +43 -0
  22. data/spec/default_segment_spec.rb +31 -0
  23. data/spec/dg1_spec.rb +42 -0
  24. data/spec/dynamic_segment_def_spec.rb +37 -0
  25. data/spec/err_segment_spec.rb +26 -0
  26. data/spec/evn_segment_spec.rb +23 -0
  27. data/spec/fts_segment_spec.rb +19 -0
  28. data/spec/in1_segment_spec.rb +34 -0
  29. data/spec/message_spec.rb +53 -0
  30. data/spec/messages_spec.rb +24 -0
  31. data/spec/mfe_segment_spec.rb +28 -0
  32. data/spec/mfi_segment_spec.rb +28 -0
  33. data/spec/msa_segment_spec.rb +27 -0
  34. data/spec/msh_segment_spec.rb +28 -0
  35. data/spec/nk1_segment_spec.rb +26 -0
  36. data/spec/obr_segment_spec.rb +45 -0
  37. data/spec/obx_segment_spec.rb +68 -0
  38. data/spec/orc_segment_spec.rb +27 -0
  39. data/spec/pid_segment_spec.rb +78 -0
  40. data/spec/prd_segment_spec.rb +29 -0
  41. data/spec/pv1_segment_spec.rb +23 -0
  42. data/spec/rf1_segment_spec.rb +29 -0
  43. data/spec/sch_segment_spec.rb +32 -0
  44. data/spec/segment_field_spec.rb +110 -0
  45. data/spec/segment_generator_spec.rb +32 -0
  46. data/spec/segment_list_storage_spec.rb +47 -0
  47. data/spec/segment_spec.rb +38 -0
  48. data/spec/sft_segment_spec.rb +26 -0
  49. data/spec/spec_helper.rb +13 -0
  50. data/spec/speed_parsing_spec.rb +19 -0
  51. data/spec/spm_segment_spec.rb +26 -0
  52. metadata +117 -13
  53. data/lib/segments/zcf.rb +0 -22
@@ -0,0 +1,52 @@
1
+ # encoding: UTF-8
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+ require 'spec_helper'
3
+
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+ describe HL7::Message do
5
+ context 'batch parsing' do
6
+ it 'should have a class method HL7::Message.parse_batch' do
7
+ expect(HL7::Message).to respond_to(:parse_batch)
8
+ end
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+
10
+ it 'should raise an exception when parsing an empty batch' do
11
+ # :empty_batch message contains a valid batch envelope with no
12
+ # contents
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+ expect do
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+ HL7::Message.parse_batch HL7MESSAGES[:empty_batch]
15
+ end.to raise_exception(HL7::ParseError, 'empty_batch_message')
16
+ end
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+
18
+ it 'should raise an exception when parsing a single message as a batch' do
19
+ expect do
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+ HL7::Message.parse_batch HL7MESSAGES[:realm_minimal_message]
21
+ end.to raise_exception(HL7::ParseError, 'badly_formed_batch_message')
22
+ end
23
+
24
+ it 'should yield multiple messages from a valid batch' do
25
+ count = 0
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+ HL7::Message.parse_batch(HL7MESSAGES[:realm_batch]) do |m|
27
+ count += 1
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+ end
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+ expect(count).to eq 2
30
+ end
31
+ end
32
+ end
33
+
34
+ describe 'String extension' do
35
+ before :all do
36
+ @batch_message = HL7MESSAGES[:realm_batch]
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+ @plain_message = HL7MESSAGES[:realm_minimal_message]
38
+ end
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+
40
+ it 'should respond_to :hl7_batch?' do
41
+ expect(@batch_message.hl7_batch?).to be true
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+ expect(@plain_message).to respond_to(:hl7_batch?)
43
+ end
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+
45
+ it 'should return true when passed a batch message' do
46
+ expect(@batch_message).to be_an_hl7_batch
47
+ end
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+
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+ it 'should return false when passed a plain message' do
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+ expect(@plain_message).not_to be_an_hl7_batch
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+ end
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+ end
@@ -0,0 +1,66 @@
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+ # encoding: UTF-8
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+ require 'spec_helper'
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+
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+ describe HL7::Message do
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+ context 'child segments' do
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+ before :all do
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+ @base = open( './test_data/obxobr.hl7' ).readlines
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+ end
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+
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+ it 'allows access to child segments' do
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+ msg = HL7::Message.new @base
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+ expect(msg).not_to be_nil
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+ expect(msg[:OBR]).not_to be_nil
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+ expect(msg[:OBR].length).to eq 3
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+ expect(msg[:OBR][0].children).not_to be_nil
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+ expect(msg[:OBR][0].children.length).to eq 6
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+ expect(msg[:OBR][1].children).not_to be_nil
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+ expect(msg[:OBR][1].children.length).to eq 3
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+ expect(msg[:OBR][2].children).not_to be_nil
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+ expect(msg[:OBR][2].children.length).to eq 1
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+ expect(msg[:OBX][0].children).not_to be_nil
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+ expect(msg[:OBX][0].children.length).to eq 1
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+
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+ msg[:OBR][0].children.each do |x|
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+ expect(x).not_to be_nil
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+ end
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+ msg[:OBR][1].children.each do |x|
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+ expect(x).not_to be_nil
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+ end
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+ msg[:OBR][2].children.each do |x|
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+ expect(x).not_to be_nil
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+ end
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+ end
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+
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+ it 'allows adding child segments' do
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+ msg = HL7::Message.new @base
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+ expect(msg).not_to be_nil
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+ expect(msg[:OBR]).not_to be_nil
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+ ob = HL7::Message::Segment::OBR.new
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+ expect(ob).not_to be_nil
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+
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+ msg << ob
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+ expect(ob.children).not_to be_nil
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+ expect(ob.segment_parent).not_to be_nil
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+ expect(ob.segment_parent).to eq msg
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+ orig_cnt = msg.length
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+
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+ (1..4).each do |x|
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+ m = HL7::Message::Segment::OBX.new
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+ m.observation_value = "taco"
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+ expect(m).not_to be_nil
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+ expect(/taco/.match(m.to_s)).not_to be_nil
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+ ob.children << m
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+ expect(ob.children.length).to eq x
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+ expect(m.segment_parent).not_to be_nil
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+ expect(m.segment_parent).to eq ob
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+ end
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+
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+ expect(@base).not_to eq msg.to_hl7
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+ expect(msg.length).not_to eq orig_cnt
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+ text_ver = msg.to_hl7
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+ expect(/taco/.match(text_ver)).not_to be_nil
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+ end
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+ end
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+ end
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+
@@ -0,0 +1,43 @@
1
+ require 'spec_helper'
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+
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+ describe Date do
4
+
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+ subject{ Date.parse('2013-12-02').to_hl7 }
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+
7
+ it "should respond to the HL7 timestamp" do
8
+ expect(subject).to eq "20131202"
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+ end
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+ end
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+
12
+ describe "to_hl7 for time related classes" do
13
+
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+ let(:formated_time){ time_now.strftime('%Y%m%d%H%M%S') }
15
+ let(:fraction_3){ "." + sprintf('%06d', time_now.to_time.usec)[0, 3] }
16
+ let(:fraction_9){ "." + sprintf('%06d', time_now.to_time.usec) + ("0" * 3) }
17
+
18
+ shared_examples "a time to_hl7" do
19
+ context "without fraction" do
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+ it { expect(time_now.to_time.to_hl7).to eq formated_time }
21
+ end
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+
23
+ context "with_fraction" do
24
+ it { expect(time_now.to_time.to_hl7(3)).to eq formated_time + fraction_3 }
25
+
26
+ it { expect(time_now.to_time.to_hl7(9)).to eq formated_time + fraction_9 }
27
+ end
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+ end
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+
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+ describe Time do
31
+ let(:time_now){ Time.now }
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+
33
+ it_should_behave_like "a time to_hl7"
34
+ end
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+
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+ describe DateTime do
37
+ let(:time_now){ DateTime.now }
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+
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+ it_should_behave_like "a time to_hl7"
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+ end
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+
42
+ end
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+
@@ -0,0 +1,31 @@
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+ # encoding: UTF-8
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+ require 'spec_helper'
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+
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+ describe HL7::Message::Segment::Default do
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+ context 'general' do
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+
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+ before :all do
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+ @base_msa = "MSA|AR|ZZ9380 ERR"
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+ end
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+
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+ it 'stores an existing segment' do
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+ seg = HL7::Message::Segment::Default.new( @base_msa )
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+ expect(seg.to_s).to eq @base_msa
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+ end
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+
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+ it 'converts to a string' do
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+ seg = HL7::Message::Segment::Default.new( @base_msa )
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+ expect(seg.to_s).to eq @base_msa
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+ expect(seg.to_hl7).to eq seg.to_s
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+ end
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+
22
+ it 'creates a raw segment' do
23
+ seg = HL7::Message::Segment::Default.new
24
+ seg.e0 = "NK1"
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+ seg.e1 = "INFO"
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+ seg.e2 = "MORE INFO"
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+ seg.e5 = "LAST INFO"
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+ expect(seg.to_s).to eq "NK1|INFO|MORE INFO|||LAST INFO"
29
+ end
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+ end
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+ end
@@ -0,0 +1,42 @@
1
+ # encoding: UTF-8
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+ require "spec_helper"
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+
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+ describe HL7::Message::Segment::DG1 do
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+ context "reading" do
6
+ let(:base_string) do
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+ "DG1|1|I9|71596^OSTEOARTHROS NOS-L/LEG ^I9|OSTEOARTHROS NOS-L/LEG |20170615140551-0800||A|"
8
+ end
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+ let(:segment){ HL7::Message::Segment::DG1.new(base_string) }
10
+
11
+ it "allows access to an DG1 segment" do
12
+ expect(segment.set_id).to eq("1")
13
+ expect(segment.diagnosis_coding_method).to eq("I9")
14
+ expect(segment.diagnosis_code).to eq("71596^OSTEOARTHROS NOS-L/LEG ^I9")
15
+ expect(segment.diagnosis_description).to eq("OSTEOARTHROS NOS-L/LEG ")
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+ expect(segment.diagnosis_date_time).to eq("20170615140551-0800")
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+ expect(segment.diagnosis_type).to eq("")
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+ expect(segment.major_diagnostic_category).to eq("A")
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+ expect(segment.diagnosis_related_group).to eq("")
20
+ expect(segment.drg_approval_indicator).to eq(nil)
21
+ expect(segment.drg_grouper_review_code).to eq(nil)
22
+ expect(segment.outlier_type).to eq(nil)
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+ expect(segment.outlier_days).to eq(nil)
24
+ expect(segment.outlier_cost).to eq(nil)
25
+ expect(segment.grouper_version_and_type).to eq(nil)
26
+ expect(segment.diagnosis_priority).to eq(nil)
27
+ expect(segment.diagnosis_clinician).to eq(nil)
28
+ expect(segment.diagnosis_classification).to eq(nil)
29
+ expect(segment.confidential_indicator).to eq(nil)
30
+ expect(segment.attestation_date_time).to eq(nil)
31
+ end
32
+ end
33
+
34
+ context "creating" do
35
+ let(:segment){ HL7::Message::Segment::DG1.new }
36
+
37
+ it "allows creation of an DGH segment" do
38
+ segment.set_id = "2"
39
+ expect(segment.set_id).to eq("2")
40
+ end
41
+ end
42
+ end
@@ -0,0 +1,37 @@
1
+ # encoding: UTF-8
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+ require 'spec_helper'
3
+
4
+ describe 'dynamic segment definition' do
5
+ context 'general' do
6
+ it 'accepts a block with a parameter' do
7
+ seg = HL7::Message::Segment.new do |s|
8
+ s.e0 = "MSK"
9
+ s.e1 = "1234"
10
+ s.e2 = "5678"
11
+ end
12
+
13
+ expect(seg.to_s).to eq "MSK|1234|5678"
14
+ end
15
+
16
+ it 'accepts a block without a parameter' do
17
+ seg = HL7::Message::Segment.new do
18
+ e0 "MSK"
19
+ e1 "1234"
20
+ e2 "5678"
21
+ end
22
+
23
+ expect(seg.to_s).to eq "MSK|1234|5678"
24
+ end
25
+
26
+ it "doesn't pollute the caller namespace" do
27
+ seg = HL7::Message::Segment.new do |s|
28
+ s.e0 = "MSK"
29
+ s.e1 = "1234"
30
+ s.e2 = "5678"
31
+ end
32
+
33
+ expect { e3 "TEST" }.to raise_error(NoMethodError)
34
+ expect(seg.to_s).to eq "MSK|1234|5678"
35
+ end
36
+ end
37
+ end
@@ -0,0 +1,26 @@
1
+ # encoding: UTF-8
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+ require 'spec_helper'
3
+
4
+ describe HL7::Message::Segment::ERR do
5
+ context 'general' do
6
+ before :all do
7
+ @base_err = 'ERR||OBR^1|100^Segment sequence error^HL70357|E|||Missing required OBR segment|Email help desk for further information on this error||||^NET^Internet^helpdesk@hl7.org'
8
+ end
9
+
10
+ it 'creates an ERR segment' do
11
+ expect do
12
+ err = HL7::Message::Segment::ERR.new( @base_err )
13
+ expect(err).not_to be_nil
14
+ expect(err.to_s).to eq @base_err
15
+ end.not_to raise_error
16
+ end
17
+
18
+ it 'allows access to an ERR segment' do
19
+ expect do
20
+ err = HL7::Message::Segment::ERR.new( @base_err )
21
+ expect(err.severity).to eq 'E'
22
+ expect(err.error_location).to eq 'OBR^1'
23
+ end.not_to raise_error
24
+ end
25
+ end
26
+ end
@@ -0,0 +1,23 @@
1
+ # encoding: UTF-8
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+ require 'spec_helper'
3
+
4
+ describe HL7::Message::Segment::EVN do
5
+ context 'general' do
6
+ before :all do
7
+ @base = "EVN|A04|20060705000000"
8
+ end
9
+
10
+ it 'allows access to an EVN segment' do
11
+ evn = HL7::Message::Segment::EVN.new @base
12
+ expect(evn.type_code).to eq "A04"
13
+ end
14
+
15
+ it 'allows creation of an EVN segment' do
16
+ evn = HL7::Message::Segment::EVN.new
17
+ evn.event_facility="A Facility"
18
+ expect(evn.event_facility).to eq 'A Facility'
19
+ evn.recorded_date = Date.new 2001,2,3
20
+ expect(evn.recorded_date).to eq "20010203"
21
+ end
22
+ end
23
+ end
@@ -0,0 +1,19 @@
1
+ require 'spec_helper'
2
+
3
+ describe HL7::Message::Segment::FTS do
4
+ context 'general' do
5
+ before :all do
6
+ base_string = 'FTS||End of File'
7
+ @fts = HL7::Message::Segment::FTS.new(base_string)
8
+ end
9
+
10
+ it 'creates an FTS segment' do
11
+ expect(@fts).to_not be_nil
12
+ end
13
+
14
+ it 'allows access to an FTS segment' do
15
+ expect(@fts.file_batch_count).to eq('')
16
+ expect(@fts.file_trailer_comment).to eq('End of File')
17
+ end
18
+ end
19
+ end
@@ -0,0 +1,34 @@
1
+ # encoding: UTF-8
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+ require 'spec_helper'
3
+
4
+ describe HL7::Message::Segment::IN1 do
5
+ context 'general' do
6
+ before :all do
7
+ @base_in1 = 'IN1|1||752|ACORDIA NATIONAL||||A|GRP|||||||SMITH^JOHN|19|19700102||||||||||||||||||WC23732763278A|||||||||||||||||X'
8
+ end
9
+
10
+ it 'creates an IN1 segment' do
11
+ expect do
12
+ in1 = HL7::Message::Segment::IN1.new( @base_in1 )
13
+ expect(in1).not_to be_nil
14
+ expect(in1.to_s).to eq @base_in1
15
+ end.not_to raise_error
16
+ end
17
+
18
+ it 'allows access to an IN1 segment' do
19
+ expect do
20
+ in1 = HL7::Message::Segment::IN1.new( @base_in1 )
21
+ expect(in1.set_id).to eq '1'
22
+ expect(in1.insurance_company_id).to eq '752'
23
+ expect(in1.insurance_company_name).to eq 'ACORDIA NATIONAL'
24
+ expect(in1.group_number).to eq 'A'
25
+ expect(in1.group_name).to eq 'GRP'
26
+ expect(in1.name_of_insured).to eq 'SMITH^JOHN'
27
+ expect(in1.insureds_relationship_to_patient).to eq '19'
28
+ expect(in1.insureds_date_of_birth).to eq '19700102'
29
+ expect(in1.policy_number).to eq 'WC23732763278A'
30
+ expect(in1.vip_indicator).to eq 'X'
31
+ end.not_to raise_error
32
+ end
33
+ end
34
+ end
@@ -0,0 +1,53 @@
1
+ require 'spec_helper'
2
+
3
+ describe HL7::Message do
4
+ describe "#correction?" do
5
+ let(:hl7) { HL7::Message.new data }
6
+ subject { hl7.correction? }
7
+
8
+ context "when is a correction" do
9
+ let(:data) {
10
+ [
11
+ 'OBR|1|A241Z^LAB||123456^A TEST^L|||201508181431||1234||||None|201502181432||||OMG123||||20150818143300', # "F" final
12
+ 'OBX|1|ST|123456^AA OBSERVATION^L^4567890^FIRST OBSERVATION^LN||42|ug/dL^Micrograms per Deciliter^UCUM|<10 ug/dL|H|||F||||OMG',
13
+ 'NTE|1||SOME',
14
+ 'NTE|2||THOUGHTS',
15
+ 'OBR|2|A241Z^LAB||123456^A TEST^L|||201508181431||1234||||None|201502181432||||OMG123||||20150818143300', # "C" corrected
16
+ 'OBX|1|ST|123456^AA OBSERVATION^L^4567890^FIRST OBSERVATION^LN||42|ug/dL^Micrograms per Deciliter^UCUM|<10 ug/dL|H|||C||||OMG',
17
+ 'NTE|1||SOME',
18
+ 'NTE|2||THOUGHTS',
19
+ ].join("\r")
20
+ }
21
+
22
+ it { is_expected.to be true }
23
+ end
24
+
25
+ context "when is not a correction" do
26
+ let(:data) {
27
+ [
28
+ 'OBR|1|A241Z^LAB||123456^A TEST^L|||201508181431||1234||||None|201502181432||||OMG123||||20150818143300', # "F" final
29
+ 'OBX|1|ST|123456^AA OBSERVATION^L^4567890^FIRST OBSERVATION^LN||42|ug/dL^Micrograms per Deciliter^UCUM|<10 ug/dL|H|||F||||OMG',
30
+ 'NTE|1||SOME',
31
+ 'NTE|2||THOUGHTS',
32
+ 'OBR|2|A241Z^LAB||123456^A TEST^L|||201508181431||1234||||None|201502181432||||OMG123||||20150818143300', # "F" final
33
+ 'OBX|1|ST|123456^AA OBSERVATION^L^4567890^FIRST OBSERVATION^LN||42|ug/dL^Micrograms per Deciliter^UCUM|<10 ug/dL|H|||F||||OMG',
34
+ 'NTE|1||SOME',
35
+ 'NTE|2||THOUGHTS',
36
+ ].join("\r")
37
+ }
38
+
39
+ it { is_expected.to be false }
40
+ end
41
+
42
+ context "when there are no results (OBX) segments" do
43
+ let(:data) {
44
+ [
45
+ 'OBR|1|A241Z^LAB||123456^A TEST^L|||201508181431||1234||||None|201502181432||||OMG123||||20150818143300',
46
+ 'OBR|2|A241Z^LAB||123456^A TEST^L|||201508181431||1234||||None|201502181432||||OMG123||||20150818143300'
47
+ ].join("\r")
48
+ }
49
+
50
+ it { is_expected.to be false }
51
+ end
52
+ end
53
+ end
@@ -0,0 +1,24 @@
1
+ require 'spec_helper'
2
+
3
+ describe "HL7 Messages" do
4
+ it 'processes multiple known messages without failing' do
5
+ expect do
6
+ HL7MESSAGES.each_pair do |key, hl7|
7
+ HL7::Message.new(hl7)
8
+ end
9
+ end.not_to raise_exception
10
+ end
11
+
12
+ describe 'MFN M13 Messages' do
13
+ it "extracts the MSH" do
14
+ expect(HL7::Message.new(HL7MESSAGES[:mfn_m13])[:MSH].sending_app).to eq 'HL7REG'
15
+ end
16
+ it 'extracts the MFI' do
17
+ expect(HL7::Message.new(HL7MESSAGES[:mfn_m13])[:MFI].master_file_identifier).to eq 'HL70006^RELIGION^HL70175'
18
+ end
19
+ it 'extracts the MFE' do
20
+ expect(HL7::Message.new(HL7MESSAGES[:mfn_m13])[:MFE][0].mfn_control_id).to eq '6772333'
21
+ expect(HL7::Message.new(HL7MESSAGES[:mfn_m13])[:MFE][1].mfn_control_id).to eq '6772334'
22
+ end
23
+ end
24
+ end