ruby-hdf5 0.0.2 → 0.0.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +72 -69
- data/lib/hdf5/attribute.rb +180 -73
- data/lib/hdf5/data_helpers.rb +190 -0
- data/lib/hdf5/dataset.rb +622 -101
- data/lib/hdf5/dtype.rb +214 -0
- data/lib/hdf5/ffi.rb +48 -10
- data/lib/hdf5/ffi_10.rb +0 -485
- data/lib/hdf5/ffi_14.rb +0 -479
- data/lib/hdf5/ffi_20.rb +9697 -0
- data/lib/hdf5/file.rb +86 -10
- data/lib/hdf5/file_context.rb +70 -0
- data/lib/hdf5/group.rb +59 -15
- data/lib/hdf5/hierarchy.rb +107 -0
- data/lib/hdf5/selection.rb +97 -0
- data/lib/hdf5/string_codec.rb +106 -0
- data/lib/hdf5/version.rb +1 -1
- data/lib/hdf5.rb +31 -0
- metadata +24 -3
data/lib/hdf5/ffi_14.rb
CHANGED
|
@@ -201,39 +201,6 @@ module HDF5
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201
201
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202
202
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ImaxdivT = Anon_Type_2
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203
203
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204
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-
attach_function 'imaxabs', [
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205
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:intmax_t
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206
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-
], :intmax_t
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207
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-
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208
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attach_function 'imaxdiv', %i[
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209
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intmax_t
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210
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-
intmax_t
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211
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-
], ImaxdivT
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212
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-
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213
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-
attach_function 'strtoimax', %i[
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214
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-
string
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215
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pointer
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-
int
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217
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-
], :intmax_t
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218
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-
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219
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attach_function 'strtoumax', %i[
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220
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-
string
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221
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pointer
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222
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-
int
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223
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], :uintmax_t
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224
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-
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225
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-
attach_function 'wcstoimax', %i[
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226
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-
pointer
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227
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-
pointer
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228
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-
int
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229
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-
], :intmax_t
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230
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-
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231
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attach_function 'wcstoumax', %i[
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-
pointer
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233
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-
pointer
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234
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-
int
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235
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], :uintmax_t
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236
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-
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237
204
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typedef :pointer, :va_list
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238
205
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239
206
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typedef :pointer, :__gnuc_va_list
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@@ -376,23 +343,6 @@ module HDF5
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376
343
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377
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typedef :__fd_mask, :fd_mask
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378
345
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379
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-
attach_function 'select', [
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380
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:int,
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381
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-
FdSet.ptr,
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382
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-
FdSet.ptr,
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383
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-
FdSet.ptr,
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384
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-
Timeval.ptr
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385
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-
], :int
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386
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-
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387
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attach_function 'pselect', [
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:int,
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-
FdSet.ptr,
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390
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FdSet.ptr,
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391
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-
FdSet.ptr,
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392
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-
Timespec.ptr,
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393
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-
C_SigsetT.ptr
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394
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-
], :int
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395
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-
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396
346
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typedef :__blksize_t, :blksize_t
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347
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398
348
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typedef :__blkcnt_t, :blkcnt_t
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@@ -2891,195 +2841,6 @@ module HDF5
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2891
2841
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2892
2842
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FposT = C_FposT
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2893
2843
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2894
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-
attach_variable :stdin, :stdin, FILE.ptr
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2895
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-
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2896
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-
attach_variable :stdout, :stdout, FILE.ptr
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2897
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-
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2898
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attach_variable :stderr, :stderr, FILE.ptr
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2899
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-
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attach_function 'remove', [
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-
:string
|
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2902
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-
], :int
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2903
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-
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2904
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attach_function 'rename', %i[
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-
string
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-
string
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2907
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-
], :int
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-
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2909
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attach_function 'renameat', %i[
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int
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string
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int
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-
string
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-
], :int
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-
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attach_function 'fclose', [
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FILE.ptr
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-
], :int
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-
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2920
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-
attach_function 'tmpfile', [], FILE.ptr
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-
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-
attach_function 'tmpnam', [
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:pointer # [:char, 20]
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-
], :string
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2925
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-
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2926
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-
attach_function 'tmpnam_r', [
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2927
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-
:pointer # [:char, 20]
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-
], :string
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2929
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-
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2930
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-
attach_function 'tempnam', %i[
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-
string
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-
string
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2933
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-
], :string
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2934
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-
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2935
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-
attach_function 'fflush', [
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2936
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-
FILE.ptr
|
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2937
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-
], :int
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|
2938
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-
|
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2939
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-
attach_function 'fflush_unlocked', [
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2940
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-
FILE.ptr
|
|
2941
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-
], :int
|
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2942
|
-
|
|
2943
|
-
attach_function 'fopen', %i[
|
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2944
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-
string
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2945
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-
string
|
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2946
|
-
], FILE.ptr
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2947
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-
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2948
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-
attach_function 'freopen', [
|
|
2949
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-
:string,
|
|
2950
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-
:string,
|
|
2951
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-
FILE.ptr
|
|
2952
|
-
], FILE.ptr
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|
2953
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-
|
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2954
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-
attach_function 'fdopen', %i[
|
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2955
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-
int
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2956
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-
string
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2957
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-
], FILE.ptr
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|
2958
|
-
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|
2959
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-
attach_function 'fopencookie', [
|
|
2960
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-
:pointer,
|
|
2961
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-
:string,
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2962
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-
CookieIoFunctionsT
|
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2963
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-
], FILE.ptr
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2964
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-
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-
attach_function 'fmemopen', %i[
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-
pointer
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-
size_t
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2968
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-
string
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2969
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-
], FILE.ptr
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2970
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-
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2971
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-
attach_function 'open_memstream', %i[
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2972
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-
pointer
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-
pointer
|
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2974
|
-
], FILE.ptr
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|
2975
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-
|
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2976
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-
attach_function 'setbuf', [
|
|
2977
|
-
FILE.ptr,
|
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2978
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-
:string
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|
2979
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-
], :void
|
|
2980
|
-
|
|
2981
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-
attach_function 'setvbuf', [
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|
2982
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-
FILE.ptr,
|
|
2983
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-
:string,
|
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2984
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-
:int,
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2985
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-
:size_t
|
|
2986
|
-
], :int
|
|
2987
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-
|
|
2988
|
-
attach_function 'setbuffer', [
|
|
2989
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-
FILE.ptr,
|
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2990
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-
:string,
|
|
2991
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-
:size_t
|
|
2992
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-
], :void
|
|
2993
|
-
|
|
2994
|
-
attach_function 'setlinebuf', [
|
|
2995
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-
FILE.ptr
|
|
2996
|
-
], :void
|
|
2997
|
-
|
|
2998
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-
attach_function 'fprintf', [
|
|
2999
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-
FILE.ptr,
|
|
3000
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-
:string
|
|
3001
|
-
], :int
|
|
3002
|
-
|
|
3003
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-
attach_function 'printf', [
|
|
3004
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-
:string
|
|
3005
|
-
], :int
|
|
3006
|
-
|
|
3007
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-
attach_function 'sprintf', %i[
|
|
3008
|
-
string
|
|
3009
|
-
string
|
|
3010
|
-
], :int
|
|
3011
|
-
|
|
3012
|
-
attach_function 'vfprintf', [
|
|
3013
|
-
FILE.ptr,
|
|
3014
|
-
:string,
|
|
3015
|
-
:__gnuc_va_list
|
|
3016
|
-
], :int
|
|
3017
|
-
|
|
3018
|
-
attach_function 'vprintf', %i[
|
|
3019
|
-
string
|
|
3020
|
-
__gnuc_va_list
|
|
3021
|
-
], :int
|
|
3022
|
-
|
|
3023
|
-
attach_function 'vsprintf', %i[
|
|
3024
|
-
string
|
|
3025
|
-
string
|
|
3026
|
-
__gnuc_va_list
|
|
3027
|
-
], :int
|
|
3028
|
-
|
|
3029
|
-
attach_function 'snprintf', %i[
|
|
3030
|
-
string
|
|
3031
|
-
size_t
|
|
3032
|
-
string
|
|
3033
|
-
], :int
|
|
3034
|
-
|
|
3035
|
-
attach_function 'vsnprintf', %i[
|
|
3036
|
-
string
|
|
3037
|
-
size_t
|
|
3038
|
-
string
|
|
3039
|
-
__gnuc_va_list
|
|
3040
|
-
], :int
|
|
3041
|
-
|
|
3042
|
-
attach_function 'vasprintf', %i[
|
|
3043
|
-
pointer
|
|
3044
|
-
string
|
|
3045
|
-
__gnuc_va_list
|
|
3046
|
-
], :int
|
|
3047
|
-
|
|
3048
|
-
attach_function '__asprintf', %i[
|
|
3049
|
-
pointer
|
|
3050
|
-
string
|
|
3051
|
-
], :int
|
|
3052
|
-
|
|
3053
|
-
attach_function 'asprintf', %i[
|
|
3054
|
-
pointer
|
|
3055
|
-
string
|
|
3056
|
-
], :int
|
|
3057
|
-
|
|
3058
|
-
attach_function 'vdprintf', %i[
|
|
3059
|
-
int
|
|
3060
|
-
string
|
|
3061
|
-
__gnuc_va_list
|
|
3062
|
-
], :int
|
|
3063
|
-
|
|
3064
|
-
attach_function 'dprintf', %i[
|
|
3065
|
-
int
|
|
3066
|
-
string
|
|
3067
|
-
], :int
|
|
3068
|
-
|
|
3069
|
-
attach_function 'fscanf', [
|
|
3070
|
-
FILE.ptr,
|
|
3071
|
-
:string
|
|
3072
|
-
], :int
|
|
3073
|
-
|
|
3074
|
-
attach_function 'scanf', [
|
|
3075
|
-
:string
|
|
3076
|
-
], :int
|
|
3077
|
-
|
|
3078
|
-
attach_function 'sscanf', %i[
|
|
3079
|
-
string
|
|
3080
|
-
string
|
|
3081
|
-
], :int
|
|
3082
|
-
|
|
3083
2844
|
typedef :float, :_Float32
|
|
3084
2845
|
|
|
3085
2846
|
typedef :double, :_Float64
|
|
@@ -3125,246 +2886,6 @@ module HDF5
|
|
|
3125
2886
|
# :__gnuc_va_list
|
|
3126
2887
|
# ], :int
|
|
3127
2888
|
|
|
3128
|
-
attach_function 'vscanf', %i[
|
|
3129
|
-
string
|
|
3130
|
-
__gnuc_va_list
|
|
3131
|
-
], :int
|
|
3132
|
-
|
|
3133
|
-
attach_function 'vsscanf', %i[
|
|
3134
|
-
string
|
|
3135
|
-
string
|
|
3136
|
-
__gnuc_va_list
|
|
3137
|
-
], :int
|
|
3138
|
-
|
|
3139
|
-
attach_function 'fgetc', [
|
|
3140
|
-
FILE.ptr
|
|
3141
|
-
], :int
|
|
3142
|
-
|
|
3143
|
-
attach_function 'getc', [
|
|
3144
|
-
FILE.ptr
|
|
3145
|
-
], :int
|
|
3146
|
-
|
|
3147
|
-
attach_function 'getchar', [], :int
|
|
3148
|
-
|
|
3149
|
-
attach_function 'getc_unlocked', [
|
|
3150
|
-
FILE.ptr
|
|
3151
|
-
], :int
|
|
3152
|
-
|
|
3153
|
-
attach_function 'getchar_unlocked', [], :int
|
|
3154
|
-
|
|
3155
|
-
attach_function 'fgetc_unlocked', [
|
|
3156
|
-
FILE.ptr
|
|
3157
|
-
], :int
|
|
3158
|
-
|
|
3159
|
-
attach_function 'fputc', [
|
|
3160
|
-
:int,
|
|
3161
|
-
FILE.ptr
|
|
3162
|
-
], :int
|
|
3163
|
-
|
|
3164
|
-
attach_function 'putc', [
|
|
3165
|
-
:int,
|
|
3166
|
-
FILE.ptr
|
|
3167
|
-
], :int
|
|
3168
|
-
|
|
3169
|
-
attach_function 'putchar', [
|
|
3170
|
-
:int
|
|
3171
|
-
], :int
|
|
3172
|
-
|
|
3173
|
-
attach_function 'fputc_unlocked', [
|
|
3174
|
-
:int,
|
|
3175
|
-
FILE.ptr
|
|
3176
|
-
], :int
|
|
3177
|
-
|
|
3178
|
-
attach_function 'putc_unlocked', [
|
|
3179
|
-
:int,
|
|
3180
|
-
FILE.ptr
|
|
3181
|
-
], :int
|
|
3182
|
-
|
|
3183
|
-
attach_function 'putchar_unlocked', [
|
|
3184
|
-
:int
|
|
3185
|
-
], :int
|
|
3186
|
-
|
|
3187
|
-
attach_function 'getw', [
|
|
3188
|
-
FILE.ptr
|
|
3189
|
-
], :int
|
|
3190
|
-
|
|
3191
|
-
attach_function 'putw', [
|
|
3192
|
-
:int,
|
|
3193
|
-
FILE.ptr
|
|
3194
|
-
], :int
|
|
3195
|
-
|
|
3196
|
-
attach_function 'fgets', [
|
|
3197
|
-
:string,
|
|
3198
|
-
:int,
|
|
3199
|
-
FILE.ptr
|
|
3200
|
-
], :string
|
|
3201
|
-
|
|
3202
|
-
attach_function '__getdelim', [
|
|
3203
|
-
:pointer,
|
|
3204
|
-
:pointer,
|
|
3205
|
-
:int,
|
|
3206
|
-
FILE.ptr
|
|
3207
|
-
], :__ssize_t
|
|
3208
|
-
|
|
3209
|
-
attach_function 'getdelim', [
|
|
3210
|
-
:pointer,
|
|
3211
|
-
:pointer,
|
|
3212
|
-
:int,
|
|
3213
|
-
FILE.ptr
|
|
3214
|
-
], :__ssize_t
|
|
3215
|
-
|
|
3216
|
-
attach_function 'getline', [
|
|
3217
|
-
:pointer,
|
|
3218
|
-
:pointer,
|
|
3219
|
-
FILE.ptr
|
|
3220
|
-
], :__ssize_t
|
|
3221
|
-
|
|
3222
|
-
attach_function 'fputs', [
|
|
3223
|
-
:string,
|
|
3224
|
-
FILE.ptr
|
|
3225
|
-
], :int
|
|
3226
|
-
|
|
3227
|
-
attach_function 'puts', [
|
|
3228
|
-
:string
|
|
3229
|
-
], :int
|
|
3230
|
-
|
|
3231
|
-
attach_function 'ungetc', [
|
|
3232
|
-
:int,
|
|
3233
|
-
FILE.ptr
|
|
3234
|
-
], :int
|
|
3235
|
-
|
|
3236
|
-
attach_function 'fread', [
|
|
3237
|
-
:pointer,
|
|
3238
|
-
:size_t,
|
|
3239
|
-
:size_t,
|
|
3240
|
-
FILE.ptr
|
|
3241
|
-
], :ulong
|
|
3242
|
-
|
|
3243
|
-
attach_function 'fwrite', [
|
|
3244
|
-
:pointer,
|
|
3245
|
-
:size_t,
|
|
3246
|
-
:size_t,
|
|
3247
|
-
FILE.ptr
|
|
3248
|
-
], :ulong
|
|
3249
|
-
|
|
3250
|
-
attach_function 'fread_unlocked', [
|
|
3251
|
-
:pointer,
|
|
3252
|
-
:size_t,
|
|
3253
|
-
:size_t,
|
|
3254
|
-
FILE.ptr
|
|
3255
|
-
], :size_t
|
|
3256
|
-
|
|
3257
|
-
attach_function 'fwrite_unlocked', [
|
|
3258
|
-
:pointer,
|
|
3259
|
-
:size_t,
|
|
3260
|
-
:size_t,
|
|
3261
|
-
FILE.ptr
|
|
3262
|
-
], :size_t
|
|
3263
|
-
|
|
3264
|
-
attach_function 'fseek', [
|
|
3265
|
-
FILE.ptr,
|
|
3266
|
-
:long,
|
|
3267
|
-
:int
|
|
3268
|
-
], :int
|
|
3269
|
-
|
|
3270
|
-
attach_function 'ftell', [
|
|
3271
|
-
FILE.ptr
|
|
3272
|
-
], :long
|
|
3273
|
-
|
|
3274
|
-
attach_function 'rewind', [
|
|
3275
|
-
FILE.ptr
|
|
3276
|
-
], :void
|
|
3277
|
-
|
|
3278
|
-
attach_function 'fseeko', [
|
|
3279
|
-
FILE.ptr,
|
|
3280
|
-
:__off_t,
|
|
3281
|
-
:int
|
|
3282
|
-
], :int
|
|
3283
|
-
|
|
3284
|
-
attach_function 'ftello', [
|
|
3285
|
-
FILE.ptr
|
|
3286
|
-
], :__off_t
|
|
3287
|
-
|
|
3288
|
-
attach_function 'fgetpos', [
|
|
3289
|
-
FILE.ptr,
|
|
3290
|
-
FposT.ptr
|
|
3291
|
-
], :int
|
|
3292
|
-
|
|
3293
|
-
attach_function 'fsetpos', [
|
|
3294
|
-
FILE.ptr,
|
|
3295
|
-
FposT.ptr
|
|
3296
|
-
], :int
|
|
3297
|
-
|
|
3298
|
-
attach_function 'clearerr', [
|
|
3299
|
-
FILE.ptr
|
|
3300
|
-
], :void
|
|
3301
|
-
|
|
3302
|
-
attach_function 'feof', [
|
|
3303
|
-
FILE.ptr
|
|
3304
|
-
], :int
|
|
3305
|
-
|
|
3306
|
-
attach_function 'ferror', [
|
|
3307
|
-
FILE.ptr
|
|
3308
|
-
], :int
|
|
3309
|
-
|
|
3310
|
-
attach_function 'clearerr_unlocked', [
|
|
3311
|
-
FILE.ptr
|
|
3312
|
-
], :void
|
|
3313
|
-
|
|
3314
|
-
attach_function 'feof_unlocked', [
|
|
3315
|
-
FILE.ptr
|
|
3316
|
-
], :int
|
|
3317
|
-
|
|
3318
|
-
attach_function 'ferror_unlocked', [
|
|
3319
|
-
FILE.ptr
|
|
3320
|
-
], :int
|
|
3321
|
-
|
|
3322
|
-
attach_function 'perror', [
|
|
3323
|
-
:string
|
|
3324
|
-
], :void
|
|
3325
|
-
|
|
3326
|
-
attach_function 'fileno', [
|
|
3327
|
-
FILE.ptr
|
|
3328
|
-
], :int
|
|
3329
|
-
|
|
3330
|
-
attach_function 'fileno_unlocked', [
|
|
3331
|
-
FILE.ptr
|
|
3332
|
-
], :int
|
|
3333
|
-
|
|
3334
|
-
attach_function 'pclose', [
|
|
3335
|
-
FILE.ptr
|
|
3336
|
-
], :int
|
|
3337
|
-
|
|
3338
|
-
attach_function 'popen', %i[
|
|
3339
|
-
string
|
|
3340
|
-
string
|
|
3341
|
-
], FILE.ptr
|
|
3342
|
-
|
|
3343
|
-
attach_function 'ctermid', [
|
|
3344
|
-
:string
|
|
3345
|
-
], :string
|
|
3346
|
-
|
|
3347
|
-
attach_function 'flockfile', [
|
|
3348
|
-
FILE.ptr
|
|
3349
|
-
], :void
|
|
3350
|
-
|
|
3351
|
-
attach_function 'ftrylockfile', [
|
|
3352
|
-
FILE.ptr
|
|
3353
|
-
], :int
|
|
3354
|
-
|
|
3355
|
-
attach_function 'funlockfile', [
|
|
3356
|
-
FILE.ptr
|
|
3357
|
-
], :void
|
|
3358
|
-
|
|
3359
|
-
attach_function '__uflow', [
|
|
3360
|
-
FILE.ptr
|
|
3361
|
-
], :int
|
|
3362
|
-
|
|
3363
|
-
attach_function '__overflow', [
|
|
3364
|
-
FILE.ptr,
|
|
3365
|
-
:int
|
|
3366
|
-
], :int
|
|
3367
|
-
|
|
3368
2889
|
enum :H5E_type_t, [
|
|
3369
2890
|
:H5E_MAJOR, 0,
|
|
3370
2891
|
:H5E_MINOR, 1
|