rubst 0.0.1

data/rubst.gemspec

@@ -0,0 +1,52 @@
+# -*- encoding: utf-8 -*-
+
+Gem::Specification.new do |s|
+  s.name = %q{rubst}
+  s.version = "0.0.1"
+
+  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
+  s.authors = ["Semin Lee"]
+  s.cert_chain = ["/Users/semin/.gem/gem-public_cert.pem"]
+  s.date = %q{2008-11-03}
+  s.default_executable = %q{rubst}
+  s.description = %q{Rewrite of Kenji's subst (http://www-cryst.bioc.cam.ac.uk/~kenji/subst/) in Ruby programming language}
+  s.email = ["seminlee@gmail.com"]
+  s.executables = ["rubst"]
+  s.extra_rdoc_files = ["History.txt", "Manifest.txt", "PostInstall.txt", "README.rdoc", "website/index.txt"]
+  s.files = ["History.txt", "Manifest.txt", "PostInstall.txt", "README.rdoc", "Rakefile", "bin/rubst", "config/hoe.rb", "config/website.yml", "javascripts/rounded_corners_lite.inc.js", "lib/enumerable_extensions.rb", "lib/environment.rb", "lib/environment_feature.rb", "lib/narray_extensions.rb", "lib/nmatrix_extensions.rb", "lib/rubst.rb", "lib/rubst/cli.rb", "rubst.gemspec", "script/console", "script/destroy", "script/generate", "script/txt2html", "test/test_enumerable_extensions.rb", "test/test_environment_feature.rb", "test/test_helper.rb", "test/test_nmatrix_extensions.rb", "test/test_rubst.rb", "test/test_rubst_cli.rb", "website/index.html", "website/index.txt", "website/javascripts/rounded_corners_lite.inc.js", "website/stylesheets/screen.css", "website/template.html.erb"]
+  s.has_rdoc = true
+  s.homepage = %q{http://rubst.rubyforge.org}
+  s.post_install_message = %q{PostInstall.txt}
+  s.rdoc_options = ["--main", "README.rdoc"]
+  s.require_paths = ["lib"]
+  s.rubyforge_project = %q{rubst}
+  s.rubygems_version = %q{1.3.1}
+  s.signing_key = %q{/Users/semin/.gem/gem-private_key.pem}
+  s.summary = %q{Rewrite of Kenji's subst (http://www-cryst.bioc.cam.ac.uk/~kenji/subst/) in Ruby programming language}
+  s.test_files = ["test/test_enumerable_extensions.rb", "test/test_environment_feature.rb", "test/test_helper.rb", "test/test_nmatrix_extensions.rb", "test/test_rubst.rb", "test/test_rubst_cli.rb"]
+
+  if s.respond_to? :specification_version then
+    current_version = Gem::Specification::CURRENT_SPECIFICATION_VERSION
+    s.specification_version = 2
+
+    if Gem::Version.new(Gem::RubyGemsVersion) >= Gem::Version.new('1.2.0') then
+      s.add_runtime_dependency(%q<narray>, [">= 0.5.9.5"])
+      s.add_runtime_dependency(%q<bio>, [">= 1.2.1"])
+      s.add_runtime_dependency(%q<facets>, [">= 2.4.5"])
+      s.add_development_dependency(%q<newgem>, [">= 1.0.5"])
+      s.add_development_dependency(%q<hoe>, [">= 1.8.0"])
+    else
+      s.add_dependency(%q<narray>, [">= 0.5.9.5"])
+      s.add_dependency(%q<bio>, [">= 1.2.1"])
+      s.add_dependency(%q<facets>, [">= 2.4.5"])
+      s.add_dependency(%q<newgem>, [">= 1.0.5"])
+      s.add_dependency(%q<hoe>, [">= 1.8.0"])
+    end
+  else
+    s.add_dependency(%q<narray>, [">= 0.5.9.5"])
+    s.add_dependency(%q<bio>, [">= 1.2.1"])
+    s.add_dependency(%q<facets>, [">= 2.4.5"])
+    s.add_dependency(%q<newgem>, [">= 1.0.5"])
+    s.add_dependency(%q<hoe>, [">= 1.8.0"])
+  end
+end

data/script/console

@@ -0,0 +1,10 @@
+#!/usr/bin/env ruby
+# File: script/console
+irb = RUBY_PLATFORM =~ /(:?mswin|mingw)/ ? 'irb.bat' : 'irb'
+
+libs =  " -r irb/completion"
+# Perhaps use a console_lib to store any extra methods I may want available in the cosole
+# libs << " -r #{File.dirname(__FILE__) + '/../lib/console_lib/console_logger.rb'}"
+libs <<  " -r #{File.dirname(__FILE__) + '/../lib/rubst.rb'}"
+puts "Loading rubst gem"
+exec "#{irb} #{libs} --simple-prompt"

data/script/destroy

@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+APP_ROOT = File.expand_path(File.join(File.dirname(__FILE__), '..'))
+
+begin
+  require 'rubigen'
+rescue LoadError
+  require 'rubygems'
+  require 'rubigen'
+end
+require 'rubigen/scripts/destroy'
+
+ARGV.shift if ['--help', '-h'].include?(ARGV[0])
+RubiGen::Base.use_component_sources! [:rubygems, :newgem, :newgem_theme, :test_unit]
+RubiGen::Scripts::Destroy.new.run(ARGV)

data/script/generate

@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+APP_ROOT = File.expand_path(File.join(File.dirname(__FILE__), '..'))
+
+begin
+  require 'rubigen'
+rescue LoadError
+  require 'rubygems'
+  require 'rubigen'
+end
+require 'rubigen/scripts/generate'
+
+ARGV.shift if ['--help', '-h'].include?(ARGV[0])
+RubiGen::Base.use_component_sources! [:rubygems, :newgem, :newgem_theme, :test_unit]
+RubiGen::Scripts::Generate.new.run(ARGV)

data/script/txt2html

@@ -0,0 +1,71 @@
+#!/usr/bin/env ruby
+
+load File.dirname(__FILE__) + "/../Rakefile"
+require 'rubyforge'
+require 'redcloth'
+require 'syntax/convertors/html'
+require 'erb'
+
+download = "http://rubyforge.org/projects/#{$hoe.rubyforge_name}"
+version  = $hoe.version
+
+def rubyforge_project_id
+  RubyForge.new.configure.autoconfig["group_ids"][$hoe.rubyforge_name]
+end
+
+class Fixnum
+  def ordinal
+    # teens
+    return 'th' if (10..19).include?(self % 100)
+    # others
+    case self % 10
+    when 1: return 'st'
+    when 2: return 'nd'
+    when 3: return 'rd'
+    else    return 'th'
+    end
+  end
+end
+
+class Time
+  def pretty
+    return "#{mday}#{mday.ordinal} #{strftime('%B')} #{year}"
+  end
+end
+
+def convert_syntax(syntax, source)
+  return Syntax::Convertors::HTML.for_syntax(syntax).convert(source).gsub(%r!^<pre>|</pre>$!,'')
+end
+
+if ARGV.length >= 1
+  src, template = ARGV
+  template ||= File.join(File.dirname(__FILE__), '/../website/template.html.erb')
+else
+  puts("Usage: #{File.split($0).last} source.txt [template.html.erb] > output.html")
+  exit!
+end
+
+template = ERB.new(File.open(template).read)
+
+title = nil
+body = nil
+File.open(src) do |fsrc|
+  title_text = fsrc.readline
+  body_text_template = fsrc.read
+  body_text = ERB.new(body_text_template).result(binding)
+  syntax_items = []
+  body_text.gsub!(%r!<(pre|code)[^>]*?syntax=['"]([^'"]+)[^>]*>(.*?)</\1>!m){
+    ident = syntax_items.length
+    element, syntax, source = $1, $2, $3
+    syntax_items << "<#{element} class='syntax'>#{convert_syntax(syntax, source)}</#{element}>"
+    "syntax-temp-#{ident}"
+  }
+  title = RedCloth.new(title_text).to_html.gsub(%r!<.*?>!,'').strip
+  body = RedCloth.new(body_text).to_html
+  body.gsub!(%r!(?:<pre><code>)?syntax-temp-(\d+)(?:</code></pre>)?!){ syntax_items[$1.to_i] }
+end
+stat = File.stat(src)
+created = stat.ctime
+modified = stat.mtime
+
+$stdout << template.result(binding)

data/test/test_enumerable_extensions.rb

@@ -0,0 +1,16 @@
+$:.unshift File.join(File.dirname(__FILE__), "..", "lib")
+
+require "test/unit"
+require "enumerable_extensions"
+
+class TestEnumerableExtensions < Test::Unit::TestCase
+
+  def test_cart_product
+    a = [1,2]
+    b = [3,4]
+    products = [[1,3], [1,4], [2,3], [2,4]]
+    results = Enumerable.cart_prod(a,b)
+    assert_equal(4, results.size)
+    products.each { |p| assert(results.include? p) }
+  end
+end

data/test/test_environment_feature.rb

@@ -0,0 +1,11 @@
+$:.unshift File.join(File.dirname(__FILE__), "..", "lib")
+
+require "test/unit"
+require "environment_feature"
+
+class TestEnvironmentFeature < Test::Unit::TestCase
+
+  def test_true
+    assert(true)
+  end
+end

data/test/test_helper.rb

@@ -0,0 +1,2 @@
+require 'test/unit'
+require File.dirname(__FILE__) + '/../lib/rubst'

data/test/test_nmatrix_extensions.rb

@@ -0,0 +1,16 @@
+$:.unshift File.join(File.dirname(__FILE__), "..", "lib")
+
+require "test/unit"
+require "nmatrix_extensions"
+
+class TestNmatrixExtensions < Test::Unit::TestCase
+
+  def test_pretty_string(opts={})
+    m = NMatrix.float(3,3).indgen
+    result ="#        A      B      C\n" +
+            "VAL   0.00   1.00   2.00\n" +
+            "      3.00   4.00   5.00\n" +
+            "      6.00   7.00   8.00"
+    assert_equal(result, m.pretty_string(:col_header => %w[A B C], :row_header => %w[VAL]))
+  end
+end

data/test/test_rubst.rb

@@ -0,0 +1,11 @@
+require File.dirname(__FILE__) + '/test_helper.rb'
+
+class TestRubst < Test::Unit::TestCase
+
+  def setup
+  end
+  
+  def test_truth
+    assert true
+  end
+end

data/test/test_rubst_cli.rb

@@ -0,0 +1,8 @@
+require File.join(File.dirname(__FILE__), "test_helper.rb")
+require 'rubst/cli'
+
+class TestRubstBinCli < Test::Unit::TestCase
+  def test_execute
+    RubstBin::CLI.execute
+  end
+end

data/website/index.html

@@ -0,0 +1,73 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
+"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <link rel="stylesheet" href="stylesheets/screen.css" type="text/css" media="screen" />
+  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+  <title>
+      rubst
+  </title>
+  <script src="javascripts/rounded_corners_lite.inc.js" type="text/javascript"></script>
+<style>
+
+</style>
+  <script type="text/javascript">
+    window.onload = function() {
+      settings = {
+          tl: { radius: 10 },
+          tr: { radius: 10 },
+          bl: { radius: 10 },
+          br: { radius: 10 },
+          antiAlias: true,
+          autoPad: true,
+          validTags: ["div"]
+      }
+      var versionBox = new curvyCorners(settings, document.getElementById("version"));
+      versionBox.applyCornersToAll();
+    }
+  </script>
+</head>
+<body>
+<div id="main">
+
+    <h1>rubst</h1>
+    <div class="sidebar">
+      <div id="version" class="clickable" onclick='document.location = "http://rubyforge.org/projects/rubst"; return false'>
+        <p>Get Version</p>
+        <a href="http://rubyforge.org/projects/rubst" class="numbers">0.0.1</a>
+      </div>
+    </div>
+    <h2>What</h2>
+<p>Rewrite of Kenji&#8217;s subst (http://www-cryst.bioc.cam.ac.uk/~kenji/subst/) in Ruby programming language</p>
+<h2>Installation</h2>
+<p><pre class='syntax'><span class="ident">sudo</span> <span class="ident">gem</span> <span class="ident">install</span> <span class="ident">rubst</span></pre></p>
+<h2>Features</h2>
+<ul>
+	<li>No more segmentation fault!</li>
+	<li>Full smoothing supported</li>
+	<li>In theory, infinite number of environment features can be handled</li>
+	<li>blah blah blah</li>
+</ul>
+<h2>Demonstration of usage</h2>
+<p>It&#8217;s pretty much the same as Kenji&#8217;s subst, so in most cases, you just need swap &#8216;subst&#8217; with &#8216;rubst&#8217;.</p>
+<pre>$rubst -l TEMLIST -c classdef.dat</pre>
+<h2>Repository</h2>
+<p>You can fetch the source from</p>
+<ul>
+	<li>github: <a href="http://github.com/semin/rubst/tree/master">http://github.com/semin/rubst/tree/master</a></li>
+</ul>
+<pre>git clone git://github.com/semin/rubst.git</pre>
+<h2>License</h2>
+<p>This code is free to use under the terms of the <span class="caps">MIT</span> license.</p>
+<h2>Contact</h2>
+<p>Comments are welcome, but Do Not Send an email to me. :)</p>
+    <p class="coda">
+      <a href="">Semin Lee</a>, 3rd November 2008<br>
+      Theme extended from <a href="http://rb2js.rubyforge.org/">Paul Battley</a>
+    </p>
+</div>
+
+<!-- insert site tracking codes here, like Google Urchin -->
+
+</body>
+</html>

data/website/index.txt

@@ -0,0 +1,38 @@
+h1. rubst
+
+h2. What
+
+Rewrite of Kenji's subst (http://www-cryst.bioc.cam.ac.uk/~kenji/subst/) in Ruby programming language
+
+h2. Installation
+
+<pre syntax="ruby">sudo gem install rubst</pre>
+
+h2. Features
+
+* No more segmentation fault!
+* Full smoothing supported
+* In theory, infinite number of environment features can be handled
+* blah blah blah
+
+h2. Demonstration of usage
+
+It's pretty much the same as Kenji's subst, so in most cases, you just need swap 'subst' with 'rubst'.
+
+<pre>$rubst -l TEMLIST -c classdef.dat</pre>
+
+h2. Repository
+
+You can fetch the source from
+
+* github: "http://github.com/semin/rubst/tree/master":http://github.com/semin/rubst/tree/master
+
+<pre>git clone git://github.com/semin/rubst.git</pre>
+
+h2. License
+
+This code is free to use under the terms of the MIT license. 
+
+h2. Contact
+
+Comments are welcome, but Do Not Send an email to me. :)

data/website/javascripts/rounded_corners_lite.inc.js

@@ -0,0 +1,285 @@
+
+ /****************************************************************
+  *                                                              *
+  *  curvyCorners                                                *
+  *  ------------                                                *
+  *                                                              *
+  *  This script generates rounded corners for your divs.        *
+  *                                                              *
+  *  Version 1.2.9                                               *
+  *  Copyright (c) 2006 Cameron Cooke                            *
+  *  By: Cameron Cooke and Tim Hutchison.                        *
+  *                                                              *
+  *                                                              *
+  *  Website: http://www.curvycorners.net                        *
+  *  Email:   info@totalinfinity.com                             *
+  *  Forum:   http://www.curvycorners.net/forum/                 *
+  *                                                              *
+  *                                                              *
+  *  This library is free software; you can redistribute         *
+  *  it and/or modify it under the terms of the GNU              *
+  *  Lesser General Public License as published by the           *
+  *  Free Software Foundation; either version 2.1 of the         *
+  *  License, or (at your option) any later version.             *
+  *                                                              *
+  *  This library is distributed in the hope that it will        *
+  *  be useful, but WITHOUT ANY WARRANTY; without even the       *
+  *  implied warranty of MERCHANTABILITY or FITNESS FOR A        *
+  *  PARTICULAR PURPOSE. See the GNU Lesser General Public       *
+  *  License for more details.                                   *
+  *                                                              *
+  *  You should have received a copy of the GNU Lesser           *
+  *  General Public License along with this library;             *
+  *  Inc., 59 Temple Place, Suite 330, Boston,                   *
+  *  MA 02111-1307 USA                                           *
+  *                                                              *
+  ****************************************************************/
+  
+var isIE = navigator.userAgent.toLowerCase().indexOf("msie") > -1; var isMoz = document.implementation && document.implementation.createDocument; var isSafari = ((navigator.userAgent.toLowerCase().indexOf('safari')!=-1)&&(navigator.userAgent.toLowerCase().indexOf('mac')!=-1))?true:false; function curvyCorners()
+{ if(typeof(arguments[0]) != "object") throw newCurvyError("First parameter of curvyCorners() must be an object."); if(typeof(arguments[1]) != "object" && typeof(arguments[1]) != "string") throw newCurvyError("Second parameter of curvyCorners() must be an object or a class name."); if(typeof(arguments[1]) == "string")
+{ var startIndex = 0; var boxCol = getElementsByClass(arguments[1]);}
+else
+{ var startIndex = 1; var boxCol = arguments;}
+var curvyCornersCol = new Array(); if(arguments[0].validTags)
+var validElements = arguments[0].validTags; else
+var validElements = ["div"]; for(var i = startIndex, j = boxCol.length; i < j; i++)
+{ var currentTag = boxCol[i].tagName.toLowerCase(); if(inArray(validElements, currentTag) !== false)
+{ curvyCornersCol[curvyCornersCol.length] = new curvyObject(arguments[0], boxCol[i]);}
+}
+this.objects = curvyCornersCol; this.applyCornersToAll = function()
+{ for(var x = 0, k = this.objects.length; x < k; x++)
+{ this.objects[x].applyCorners();}
+}
+}
+function curvyObject()
+{ this.box = arguments[1]; this.settings = arguments[0]; this.topContainer = null; this.bottomContainer = null; this.masterCorners = new Array(); this.contentDIV = null; var boxHeight = get_style(this.box, "height", "height"); var boxWidth = get_style(this.box, "width", "width"); var borderWidth = get_style(this.box, "borderTopWidth", "border-top-width"); var borderColour = get_style(this.box, "borderTopColor", "border-top-color"); var boxColour = get_style(this.box, "backgroundColor", "background-color"); var backgroundImage = get_style(this.box, "backgroundImage", "background-image"); var boxPosition = get_style(this.box, "position", "position"); var boxPadding = get_style(this.box, "paddingTop", "padding-top"); this.boxHeight = parseInt(((boxHeight != "" && boxHeight != "auto" && boxHeight.indexOf("%") == -1)? boxHeight.substring(0, boxHeight.indexOf("px")) : this.box.scrollHeight)); this.boxWidth = parseInt(((boxWidth != "" && boxWidth != "auto" && boxWidth.indexOf("%") == -1)? boxWidth.substring(0, boxWidth.indexOf("px")) : this.box.scrollWidth)); this.borderWidth = parseInt(((borderWidth != "" && borderWidth.indexOf("px") !== -1)? borderWidth.slice(0, borderWidth.indexOf("px")) : 0)); this.boxColour = format_colour(boxColour); this.boxPadding = parseInt(((boxPadding != "" && boxPadding.indexOf("px") !== -1)? boxPadding.slice(0, boxPadding.indexOf("px")) : 0)); this.borderColour = format_colour(borderColour); this.borderString = this.borderWidth + "px" + " solid " + this.borderColour; this.backgroundImage = ((backgroundImage != "none")? backgroundImage : ""); this.boxContent = this.box.innerHTML; if(boxPosition != "absolute") this.box.style.position = "relative"; this.box.style.padding = "0px"; if(isIE && boxWidth == "auto" && boxHeight == "auto") this.box.style.width = "100%"; if(this.settings.autoPad == true && this.boxPadding > 0)
+this.box.innerHTML = ""; this.applyCorners = function()
+{ for(var t = 0; t < 2; t++)
+{ switch(t)
+{ case 0:
+if(this.settings.tl || this.settings.tr)
+{ var newMainContainer = document.createElement("DIV"); newMainContainer.style.width = "100%"; newMainContainer.style.fontSize = "1px"; newMainContainer.style.overflow = "hidden"; newMainContainer.style.position = "absolute"; newMainContainer.style.paddingLeft = this.borderWidth + "px"; newMainContainer.style.paddingRight = this.borderWidth + "px"; var topMaxRadius = Math.max(this.settings.tl ? this.settings.tl.radius : 0, this.settings.tr ? this.settings.tr.radius : 0); newMainContainer.style.height = topMaxRadius + "px"; newMainContainer.style.top = 0 - topMaxRadius + "px"; newMainContainer.style.left = 0 - this.borderWidth + "px"; this.topContainer = this.box.appendChild(newMainContainer);}
+break; case 1:
+if(this.settings.bl || this.settings.br)
+{ var newMainContainer = document.createElement("DIV"); newMainContainer.style.width = "100%"; newMainContainer.style.fontSize = "1px"; newMainContainer.style.overflow = "hidden"; newMainContainer.style.position = "absolute"; newMainContainer.style.paddingLeft = this.borderWidth + "px"; newMainContainer.style.paddingRight = this.borderWidth + "px"; var botMaxRadius = Math.max(this.settings.bl ? this.settings.bl.radius : 0, this.settings.br ? this.settings.br.radius : 0); newMainContainer.style.height = botMaxRadius + "px"; newMainContainer.style.bottom = 0 - botMaxRadius + "px"; newMainContainer.style.left = 0 - this.borderWidth + "px"; this.bottomContainer = this.box.appendChild(newMainContainer);}
+break;}
+}
+if(this.topContainer) this.box.style.borderTopWidth = "0px"; if(this.bottomContainer) this.box.style.borderBottomWidth = "0px"; var corners = ["tr", "tl", "br", "bl"]; for(var i in corners)
+{ if(i > -1 < 4)
+{ var cc = corners[i]; if(!this.settings[cc])
+{ if(((cc == "tr" || cc == "tl") && this.topContainer != null) || ((cc == "br" || cc == "bl") && this.bottomContainer != null))
+{ var newCorner = document.createElement("DIV"); newCorner.style.position = "relative"; newCorner.style.fontSize = "1px"; newCorner.style.overflow = "hidden"; if(this.backgroundImage == "")
+newCorner.style.backgroundColor = this.boxColour; else
+newCorner.style.backgroundImage = this.backgroundImage; switch(cc)
+{ case "tl":
+newCorner.style.height = topMaxRadius - this.borderWidth + "px"; newCorner.style.marginRight = this.settings.tr.radius - (this.borderWidth*2) + "px"; newCorner.style.borderLeft = this.borderString; newCorner.style.borderTop = this.borderString; newCorner.style.left = -this.borderWidth + "px"; break; case "tr":
+newCorner.style.height = topMaxRadius - this.borderWidth + "px"; newCorner.style.marginLeft = this.settings.tl.radius - (this.borderWidth*2) + "px"; newCorner.style.borderRight = this.borderString; newCorner.style.borderTop = this.borderString; newCorner.style.backgroundPosition = "-" + (topMaxRadius + this.borderWidth) + "px 0px"; newCorner.style.left = this.borderWidth + "px"; break; case "bl":
+newCorner.style.height = botMaxRadius - this.borderWidth + "px"; newCorner.style.marginRight = this.settings.br.radius - (this.borderWidth*2) + "px"; newCorner.style.borderLeft = this.borderString; newCorner.style.borderBottom = this.borderString; newCorner.style.left = -this.borderWidth + "px"; newCorner.style.backgroundPosition = "-" + (this.borderWidth) + "px -" + (this.boxHeight + (botMaxRadius + this.borderWidth)) + "px"; break; case "br":
+newCorner.style.height = botMaxRadius - this.borderWidth + "px"; newCorner.style.marginLeft = this.settings.bl.radius - (this.borderWidth*2) + "px"; newCorner.style.borderRight = this.borderString; newCorner.style.borderBottom = this.borderString; newCorner.style.left = this.borderWidth + "px"
+newCorner.style.backgroundPosition = "-" + (botMaxRadius + this.borderWidth) + "px -" + (this.boxHeight + (botMaxRadius + this.borderWidth)) + "px"; break;}
+}
+}
+else
+{ if(this.masterCorners[this.settings[cc].radius])
+{ var newCorner = this.masterCorners[this.settings[cc].radius].cloneNode(true);}
+else
+{ var newCorner = document.createElement("DIV"); newCorner.style.height = this.settings[cc].radius + "px"; newCorner.style.width = this.settings[cc].radius + "px"; newCorner.style.position = "absolute"; newCorner.style.fontSize = "1px"; newCorner.style.overflow = "hidden"; var borderRadius = parseInt(this.settings[cc].radius - this.borderWidth); for(var intx = 0, j = this.settings[cc].radius; intx < j; intx++)
+{ if((intx +1) >= borderRadius)
+var y1 = -1; else
+var y1 = (Math.floor(Math.sqrt(Math.pow(borderRadius, 2) - Math.pow((intx+1), 2))) - 1); if(borderRadius != j)
+{ if((intx) >= borderRadius)
+var y2 = -1; else
+var y2 = Math.ceil(Math.sqrt(Math.pow(borderRadius,2) - Math.pow(intx, 2))); if((intx+1) >= j)
+var y3 = -1; else
+var y3 = (Math.floor(Math.sqrt(Math.pow(j ,2) - Math.pow((intx+1), 2))) - 1);}
+if((intx) >= j)
+var y4 = -1; else
+var y4 = Math.ceil(Math.sqrt(Math.pow(j ,2) - Math.pow(intx, 2))); if(y1 > -1) this.drawPixel(intx, 0, this.boxColour, 100, (y1+1), newCorner, -1, this.settings[cc].radius); if(borderRadius != j)
+{ for(var inty = (y1 + 1); inty < y2; inty++)
+{ if(this.settings.antiAlias)
+{ if(this.backgroundImage != "")
+{ var borderFract = (pixelFraction(intx, inty, borderRadius) * 100); if(borderFract < 30)
+{ this.drawPixel(intx, inty, this.borderColour, 100, 1, newCorner, 0, this.settings[cc].radius);}
+else
+{ this.drawPixel(intx, inty, this.borderColour, 100, 1, newCorner, -1, this.settings[cc].radius);}
+}
+else
+{ var pixelcolour = BlendColour(this.boxColour, this.borderColour, pixelFraction(intx, inty, borderRadius)); this.drawPixel(intx, inty, pixelcolour, 100, 1, newCorner, 0, this.settings[cc].radius, cc);}
+}
+}
+if(this.settings.antiAlias)
+{ if(y3 >= y2)
+{ if (y2 == -1) y2 = 0; this.drawPixel(intx, y2, this.borderColour, 100, (y3 - y2 + 1), newCorner, 0, 0);}
+}
+else
+{ if(y3 >= y1)
+{ this.drawPixel(intx, (y1 + 1), this.borderColour, 100, (y3 - y1), newCorner, 0, 0);}
+}
+var outsideColour = this.borderColour;}
+else
+{ var outsideColour = this.boxColour; var y3 = y1;}
+if(this.settings.antiAlias)
+{ for(var inty = (y3 + 1); inty < y4; inty++)
+{ this.drawPixel(intx, inty, outsideColour, (pixelFraction(intx, inty , j) * 100), 1, newCorner, ((this.borderWidth > 0)? 0 : -1), this.settings[cc].radius);}
+}
+}
+this.masterCorners[this.settings[cc].radius] = newCorner.cloneNode(true);}
+if(cc != "br")
+{ for(var t = 0, k = newCorner.childNodes.length; t < k; t++)
+{ var pixelBar = newCorner.childNodes[t]; var pixelBarTop = parseInt(pixelBar.style.top.substring(0, pixelBar.style.top.indexOf("px"))); var pixelBarLeft = parseInt(pixelBar.style.left.substring(0, pixelBar.style.left.indexOf("px"))); var pixelBarHeight = parseInt(pixelBar.style.height.substring(0, pixelBar.style.height.indexOf("px"))); if(cc == "tl" || cc == "bl"){ pixelBar.style.left = this.settings[cc].radius -pixelBarLeft -1 + "px";}
+if(cc == "tr" || cc == "tl"){ pixelBar.style.top = this.settings[cc].radius -pixelBarHeight -pixelBarTop + "px";}
+switch(cc)
+{ case "tr":
+pixelBar.style.backgroundPosition = "-" + Math.abs((this.boxWidth - this.settings[cc].radius + this.borderWidth) + pixelBarLeft) + "px -" + Math.abs(this.settings[cc].radius -pixelBarHeight -pixelBarTop - this.borderWidth) + "px"; break; case "tl":
+pixelBar.style.backgroundPosition = "-" + Math.abs((this.settings[cc].radius -pixelBarLeft -1) - this.borderWidth) + "px -" + Math.abs(this.settings[cc].radius -pixelBarHeight -pixelBarTop - this.borderWidth) + "px"; break; case "bl":
+pixelBar.style.backgroundPosition = "-" + Math.abs((this.settings[cc].radius -pixelBarLeft -1) - this.borderWidth) + "px -" + Math.abs((this.boxHeight + this.settings[cc].radius + pixelBarTop) -this.borderWidth) + "px"; break;}
+}
+}
+}
+if(newCorner)
+{ switch(cc)
+{ case "tl":
+if(newCorner.style.position == "absolute") newCorner.style.top = "0px"; if(newCorner.style.position == "absolute") newCorner.style.left = "0px"; if(this.topContainer) this.topContainer.appendChild(newCorner); break; case "tr":
+if(newCorner.style.position == "absolute") newCorner.style.top = "0px"; if(newCorner.style.position == "absolute") newCorner.style.right = "0px"; if(this.topContainer) this.topContainer.appendChild(newCorner); break; case "bl":
+if(newCorner.style.position == "absolute") newCorner.style.bottom = "0px"; if(newCorner.style.position == "absolute") newCorner.style.left = "0px"; if(this.bottomContainer) this.bottomContainer.appendChild(newCorner); break; case "br":
+if(newCorner.style.position == "absolute") newCorner.style.bottom = "0px"; if(newCorner.style.position == "absolute") newCorner.style.right = "0px"; if(this.bottomContainer) this.bottomContainer.appendChild(newCorner); break;}
+}
+}
+}
+var radiusDiff = new Array(); radiusDiff["t"] = Math.abs(this.settings.tl.radius - this.settings.tr.radius)
+radiusDiff["b"] = Math.abs(this.settings.bl.radius - this.settings.br.radius); for(z in radiusDiff)
+{ if(z == "t" || z == "b")
+{ if(radiusDiff[z])
+{ var smallerCornerType = ((this.settings[z + "l"].radius < this.settings[z + "r"].radius)? z +"l" : z +"r"); var newFiller = document.createElement("DIV"); newFiller.style.height = radiusDiff[z] + "px"; newFiller.style.width = this.settings[smallerCornerType].radius+ "px"
+newFiller.style.position = "absolute"; newFiller.style.fontSize = "1px"; newFiller.style.overflow = "hidden"; newFiller.style.backgroundColor = this.boxColour; switch(smallerCornerType)
+{ case "tl":
+newFiller.style.bottom = "0px"; newFiller.style.left = "0px"; newFiller.style.borderLeft = this.borderString; this.topContainer.appendChild(newFiller); break; case "tr":
+newFiller.style.bottom = "0px"; newFiller.style.right = "0px"; newFiller.style.borderRight = this.borderString; this.topContainer.appendChild(newFiller); break; case "bl":
+newFiller.style.top = "0px"; newFiller.style.left = "0px"; newFiller.style.borderLeft = this.borderString; this.bottomContainer.appendChild(newFiller); break; case "br":
+newFiller.style.top = "0px"; newFiller.style.right = "0px"; newFiller.style.borderRight = this.borderString; this.bottomContainer.appendChild(newFiller); break;}
+}
+var newFillerBar = document.createElement("DIV"); newFillerBar.style.position = "relative"; newFillerBar.style.fontSize = "1px"; newFillerBar.style.overflow = "hidden"; newFillerBar.style.backgroundColor = this.boxColour; newFillerBar.style.backgroundImage = this.backgroundImage; switch(z)
+{ case "t":
+if(this.topContainer)
+{ if(this.settings.tl.radius && this.settings.tr.radius)
+{ newFillerBar.style.height = topMaxRadius - this.borderWidth + "px"; newFillerBar.style.marginLeft = this.settings.tl.radius - this.borderWidth + "px"; newFillerBar.style.marginRight = this.settings.tr.radius - this.borderWidth + "px"; newFillerBar.style.borderTop = this.borderString; if(this.backgroundImage != "")
+newFillerBar.style.backgroundPosition = "-" + (topMaxRadius + this.borderWidth) + "px 0px"; this.topContainer.appendChild(newFillerBar);}
+this.box.style.backgroundPosition = "0px -" + (topMaxRadius - this.borderWidth) + "px";}
+break; case "b":
+if(this.bottomContainer)
+{ if(this.settings.bl.radius && this.settings.br.radius)
+{ newFillerBar.style.height = botMaxRadius - this.borderWidth + "px"; newFillerBar.style.marginLeft = this.settings.bl.radius - this.borderWidth + "px"; newFillerBar.style.marginRight = this.settings.br.radius - this.borderWidth + "px"; newFillerBar.style.borderBottom = this.borderString; if(this.backgroundImage != "")
+newFillerBar.style.backgroundPosition = "-" + (botMaxRadius + this.borderWidth) + "px -" + (this.boxHeight + (topMaxRadius + this.borderWidth)) + "px"; this.bottomContainer.appendChild(newFillerBar);}
+}
+break;}
+}
+}
+if(this.settings.autoPad == true && this.boxPadding > 0)
+{ var contentContainer = document.createElement("DIV"); contentContainer.style.position = "relative"; contentContainer.innerHTML = this.boxContent; contentContainer.className = "autoPadDiv"; var topPadding = Math.abs(topMaxRadius - this.boxPadding); var botPadding = Math.abs(botMaxRadius - this.boxPadding); if(topMaxRadius < this.boxPadding)
+contentContainer.style.paddingTop = topPadding + "px"; if(botMaxRadius < this.boxPadding)
+contentContainer.style.paddingBottom = botMaxRadius + "px"; contentContainer.style.paddingLeft = this.boxPadding + "px"; contentContainer.style.paddingRight = this.boxPadding + "px"; this.contentDIV = this.box.appendChild(contentContainer);}
+}
+this.drawPixel = function(intx, inty, colour, transAmount, height, newCorner, image, cornerRadius)
+{ var pixel = document.createElement("DIV"); pixel.style.height = height + "px"; pixel.style.width = "1px"; pixel.style.position = "absolute"; pixel.style.fontSize = "1px"; pixel.style.overflow = "hidden"; var topMaxRadius = Math.max(this.settings["tr"].radius, this.settings["tl"].radius); if(image == -1 && this.backgroundImage != "")
+{ pixel.style.backgroundImage = this.backgroundImage; pixel.style.backgroundPosition = "-" + (this.boxWidth - (cornerRadius - intx) + this.borderWidth) + "px -" + ((this.boxHeight + topMaxRadius + inty) -this.borderWidth) + "px";}
+else
+{ pixel.style.backgroundColor = colour;}
+if (transAmount != 100)
+setOpacity(pixel, transAmount); pixel.style.top = inty + "px"; pixel.style.left = intx + "px"; newCorner.appendChild(pixel);}
+}
+function insertAfter(parent, node, referenceNode)
+{ parent.insertBefore(node, referenceNode.nextSibling);}
+function BlendColour(Col1, Col2, Col1Fraction)
+{ var red1 = parseInt(Col1.substr(1,2),16); var green1 = parseInt(Col1.substr(3,2),16); var blue1 = parseInt(Col1.substr(5,2),16); var red2 = parseInt(Col2.substr(1,2),16); var green2 = parseInt(Col2.substr(3,2),16); var blue2 = parseInt(Col2.substr(5,2),16); if(Col1Fraction > 1 || Col1Fraction < 0) Col1Fraction = 1; var endRed = Math.round((red1 * Col1Fraction) + (red2 * (1 - Col1Fraction))); if(endRed > 255) endRed = 255; if(endRed < 0) endRed = 0; var endGreen = Math.round((green1 * Col1Fraction) + (green2 * (1 - Col1Fraction))); if(endGreen > 255) endGreen = 255; if(endGreen < 0) endGreen = 0; var endBlue = Math.round((blue1 * Col1Fraction) + (blue2 * (1 - Col1Fraction))); if(endBlue > 255) endBlue = 255; if(endBlue < 0) endBlue = 0; return "#" + IntToHex(endRed)+ IntToHex(endGreen)+ IntToHex(endBlue);}
+function IntToHex(strNum)
+{ base = strNum / 16; rem = strNum % 16; base = base - (rem / 16); baseS = MakeHex(base); remS = MakeHex(rem); return baseS + '' + remS;}
+function MakeHex(x)
+{ if((x >= 0) && (x <= 9))
+{ return x;}
+else
+{ switch(x)
+{ case 10: return "A"; case 11: return "B"; case 12: return "C"; case 13: return "D"; case 14: return "E"; case 15: return "F";}
+}
+}
+function pixelFraction(x, y, r)
+{ var pixelfraction = 0; var xvalues = new Array(1); var yvalues = new Array(1); var point = 0; var whatsides = ""; var intersect = Math.sqrt((Math.pow(r,2) - Math.pow(x,2))); if ((intersect >= y) && (intersect < (y+1)))
+{ whatsides = "Left"; xvalues[point] = 0; yvalues[point] = intersect - y; point = point + 1;}
+var intersect = Math.sqrt((Math.pow(r,2) - Math.pow(y+1,2))); if ((intersect >= x) && (intersect < (x+1)))
+{ whatsides = whatsides + "Top"; xvalues[point] = intersect - x; yvalues[point] = 1; point = point + 1;}
+var intersect = Math.sqrt((Math.pow(r,2) - Math.pow(x+1,2))); if ((intersect >= y) && (intersect < (y+1)))
+{ whatsides = whatsides + "Right"; xvalues[point] = 1; yvalues[point] = intersect - y; point = point + 1;}
+var intersect = Math.sqrt((Math.pow(r,2) - Math.pow(y,2))); if ((intersect >= x) && (intersect < (x+1)))
+{ whatsides = whatsides + "Bottom"; xvalues[point] = intersect - x; yvalues[point] = 0;}
+switch (whatsides)
+{ case "LeftRight":
+pixelfraction = Math.min(yvalues[0],yvalues[1]) + ((Math.max(yvalues[0],yvalues[1]) - Math.min(yvalues[0],yvalues[1]))/2); break; case "TopRight":
+pixelfraction = 1-(((1-xvalues[0])*(1-yvalues[1]))/2); break; case "TopBottom":
+pixelfraction = Math.min(xvalues[0],xvalues[1]) + ((Math.max(xvalues[0],xvalues[1]) - Math.min(xvalues[0],xvalues[1]))/2); break; case "LeftBottom":
+pixelfraction = (yvalues[0]*xvalues[1])/2; break; default:
+pixelfraction = 1;}
+return pixelfraction;}
+function rgb2Hex(rgbColour)
+{ try{ var rgbArray = rgb2Array(rgbColour); var red = parseInt(rgbArray[0]); var green = parseInt(rgbArray[1]); var blue = parseInt(rgbArray[2]); var hexColour = "#" + IntToHex(red) + IntToHex(green) + IntToHex(blue);}
+catch(e){ alert("There was an error converting the RGB value to Hexadecimal in function rgb2Hex");}
+return hexColour;}
+function rgb2Array(rgbColour)
+{ var rgbValues = rgbColour.substring(4, rgbColour.indexOf(")")); var rgbArray = rgbValues.split(", "); return rgbArray;}
+function setOpacity(obj, opacity)
+{ opacity = (opacity == 100)?99.999:opacity; if(isSafari && obj.tagName != "IFRAME")
+{ var rgbArray = rgb2Array(obj.style.backgroundColor); var red = parseInt(rgbArray[0]); var green = parseInt(rgbArray[1]); var blue = parseInt(rgbArray[2]); obj.style.backgroundColor = "rgba(" + red + ", " + green + ", " + blue + ", " + opacity/100 + ")";}
+else if(typeof(obj.style.opacity) != "undefined")
+{ obj.style.opacity = opacity/100;}
+else if(typeof(obj.style.MozOpacity) != "undefined")
+{ obj.style.MozOpacity = opacity/100;}
+else if(typeof(obj.style.filter) != "undefined")
+{ obj.style.filter = "alpha(opacity:" + opacity + ")";}
+else if(typeof(obj.style.KHTMLOpacity) != "undefined")
+{ obj.style.KHTMLOpacity = opacity/100;}
+}
+function inArray(array, value)
+{ for(var i = 0; i < array.length; i++){ if (array[i] === value) return i;}
+return false;}
+function inArrayKey(array, value)
+{ for(key in array){ if(key === value) return true;}
+return false;}
+function addEvent(elm, evType, fn, useCapture) { if (elm.addEventListener) { elm.addEventListener(evType, fn, useCapture); return true;}
+else if (elm.attachEvent) { var r = elm.attachEvent('on' + evType, fn); return r;}
+else { elm['on' + evType] = fn;}
+}
+function removeEvent(obj, evType, fn, useCapture){ if (obj.removeEventListener){ obj.removeEventListener(evType, fn, useCapture); return true;} else if (obj.detachEvent){ var r = obj.detachEvent("on"+evType, fn); return r;} else { alert("Handler could not be removed");}
+}
+function format_colour(colour)
+{ var returnColour = "#ffffff"; if(colour != "" && colour != "transparent")
+{ if(colour.substr(0, 3) == "rgb")
+{ returnColour = rgb2Hex(colour);}
+else if(colour.length == 4)
+{ returnColour = "#" + colour.substring(1, 2) + colour.substring(1, 2) + colour.substring(2, 3) + colour.substring(2, 3) + colour.substring(3, 4) + colour.substring(3, 4);}
+else
+{ returnColour = colour;}
+}
+return returnColour;}
+function get_style(obj, property, propertyNS)
+{ try
+{ if(obj.currentStyle)
+{ var returnVal = eval("obj.currentStyle." + property);}
+else
+{ if(isSafari && obj.style.display == "none")
+{ obj.style.display = ""; var wasHidden = true;}
+var returnVal = document.defaultView.getComputedStyle(obj, '').getPropertyValue(propertyNS); if(isSafari && wasHidden)
+{ obj.style.display = "none";}
+}
+}
+catch(e)
+{ }
+return returnVal;}
+function getElementsByClass(searchClass, node, tag)
+{ var classElements = new Array(); if(node == null)
+node = document; if(tag == null)
+tag = '*'; var els = node.getElementsByTagName(tag); var elsLen = els.length; var pattern = new RegExp("(^|\s)"+searchClass+"(\s|$)"); for (i = 0, j = 0; i < elsLen; i++)
+{ if(pattern.test(els[i].className))
+{ classElements[j] = els[i]; j++;}
+}
+return classElements;}
+function newCurvyError(errorMessage)
+{ return new Error("curvyCorners Error:\n" + errorMessage)
+}