rocker 0.0.9 → 0.0.10

data/Rakefile

@@ -14,6 +14,7 @@ $hoe = Hoe.spec 'rocker' do
   self.developer 'John Woods', 'john.woods@marcottelab.org'
   self.post_install_message = 'PostInstall.txt' # TODO remove if post-install message not required
   # self.extra_deps         = [['activesupport','>= 2.0.2']]
+  self.extra_deps = [['facets','>=2.8.3']]
 end
 
 require 'newgem/tasks'

data/ext/rockerxx/rockerxx.h

@@ -45,7 +45,11 @@ bool path_to_uint(const boost::filesystem::path& p, uint& n) {
 class Rocker {
 public:
 
-    // Connect to the database and create the read transaction
+    // Connect to the database and create the read transaction.
+    // This also creates the place where query results from the fetch operation will
+    // be stored. It won't work if the fetcher creates those results itself, since
+    // perform() apparently creates a copy and therefore doesn't write to the
+    // original's var.
     Rocker(string dbarg, uint m_id, uint e_id)
     : c(dbarg), known_(new map<uint, set<uint> >), fetch(m_id, known_), update(e_id)
     {

data/lib/rocker.rb

@@ -2,13 +2,14 @@ $:.unshift(File.dirname(__FILE__)) unless
   $:.include?(File.dirname(__FILE__)) || $:.include?(File.expand_path(File.dirname(__FILE__)))
 
 # STDERR.puts("__FILE__=#{__FILE__}\ndirname=#{File.dirname(__FILE__)}")
-# $:.unshift(File.join(File.dirname(__FILE__),'..','ext','rocker'))
+# $:.unshift(File.join(File.dirname(__FILE__),'..','ext','rockerxx'))
 # STDERR.puts($:)
 
-#require 'rockerxx'
+require 'facets'
+require_local '../ext/rockerxx/rockerxx.so'
 
 module Rocker
-  VERSION = '0.0.9'
+  VERSION = '0.0.10'
   DBARGS  = "dbname=crossval_development user=jwoods password=youwish1"
 
   # Calculate AUCs in the current working directory

metadata

@@ -5,8 +5,8 @@ version: !ruby/object:Gem::Version
   segments: 
   - 0
   - 0
-  - 9
-  version: 0.0.9
+  - 10
+  version: 0.0.10
 platform: ruby
 authors: 
 - John Woods
@@ -14,13 +14,27 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2010-04-24 00:00:00 -05:00
+date: 2010-04-26 00:00:00 -05:00
 default_executable: 
 dependencies: 
 - !ruby/object:Gem::Dependency 
-  name: rubyforge
+  name: facets
   prerelease: false
   requirement: &id001 !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        segments: 
+        - 2
+        - 8
+        - 3
+        version: 2.8.3
+  type: :runtime
+  version_requirements: *id001
+- !ruby/object:Gem::Dependency 
+  name: rubyforge
+  prerelease: false
+  requirement: &id002 !ruby/object:Gem::Requirement 
     requirements: 
     - - ">="
       - !ruby/object:Gem::Version 
@@ -30,11 +44,11 @@ dependencies:
         - 4
         version: 2.0.4
   type: :development
-  version_requirements: *id001
+  version_requirements: *id002
 - !ruby/object:Gem::Dependency 
   name: hoe
   prerelease: false
-  requirement: &id002 !ruby/object:Gem::Requirement 
+  requirement: &id003 !ruby/object:Gem::Requirement 
     requirements: 
     - - ">="
       - !ruby/object:Gem::Version 
@@ -44,7 +58,7 @@ dependencies:
         - 0
         version: 2.6.0
   type: :development
-  version_requirements: *id002
+  version_requirements: *id003
 description: |-
   This gem is very fast C++ code for calculating AUCs on results of cross-validation.