roboneuro 0.1.7 → 0.1.8

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: 178f8979297b26fe80f582a9e6e41e6dd4bdb4eb554fdf42fd7528d991f8efac
-  data.tar.gz: 5b7e8606cc13ac8019ca52e93ecb282e20595c751af9331d72e5b320da35f58a
+  metadata.gz: b6bc5531d47410a0156c6817e01acd475e252dfb41c36785b0c15abac3f2bf14
+  data.tar.gz: 6c8a3f226c75cc67e658dc4d2a41c50bd62fc90126651540cdcc249721c49d40
 SHA512:
-  metadata.gz: 93dcbf3a086abcd68d37754c5d4faa9ee8529eb0981b7f845d2fb8af9af803d9fe66eaf145ab739a5b8d0f18c3e7d585002216f171a2037e23a8a4020b0b7ca8
-  data.tar.gz: 723db9876f4f378f183533d2c4f17d14fc01e8f60643fa387c49eb6834f1fb6e2fc194d78e29cef3bba1345aa372f47eccf4906642b095007334fabe66beba65
+  metadata.gz: 2d9198dff147e2fb229da918d3a32eadde149a766962f092080c6f8d0fbcffbaac915731b7b17d4b4853d1b34e05024f7985dee06585842fe0364b3b2f716da1
+  data.tar.gz: 2872e08d3cda62804bdee632620ea9b085808cf384055f7ec47b0fc1a6ee2f45fc2f45e60bf50a1fd468bd55b5c9f8420117778583b096b2cbfea520f0516e49

data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    roboneuro (0.1.7)
+    roboneuro (0.1.8)
       bibtex-ruby (~> 6.0.0)
       dotenv
       github-linguist (~> 5.3)
@@ -60,7 +60,7 @@ GEM
       rugged (>= 0.25.1)
     hashdiff (1.0.1)
     http-accept (1.7.0)
-    http-cookie (1.0.4)
+    http-cookie (1.0.5)
       domain_name (~> 0.5)
     latex-decode (0.3.2)
     method_source (1.0.0)
@@ -72,9 +72,9 @@ GEM
     netrc (0.11.0)
     nokogiri (1.10.8)
       mini_portile2 (~> 2.4.0)
-    octokit (4.22.0)
-      faraday (>= 0.9)
-      sawyer (~> 0.8.0, >= 0.5.3)
+    octokit (4.23.0)
+      faraday (>= 1, < 3)
+      sawyer (~> 0.9)
     openjournals-nameable (1.1.7)
     pry (0.13.1)
       coderay (~> 1.1)
@@ -103,14 +103,14 @@ GEM
     rspec-support (3.10.2)
     ruby2_keywords (0.0.5)
     rugged (1.4.3)
-    sawyer (0.8.2)
+    sawyer (0.9.1)
       addressable (>= 2.3.5)
-      faraday (> 0.8, < 2.0)
+      faraday (>= 0.17.3, < 3)
     thor (0.20.3)
     tilt (2.0.10)
     unf (0.1.4)
       unf_ext
-    unf_ext (0.0.8.1)
+    unf_ext (0.0.8.2)
     unicode (0.4.4.4)
     vcr (6.0.0)
     webmock (3.11.2)

data/lib/whedon/version.rb

@@ -1,3 +1,3 @@
 module Whedon
-  VERSION = "0.1.7"
+  VERSION = "0.1.8"
 end

data/lib/whedon.rb

@@ -234,8 +234,11 @@ module Whedon
       "#{ENV['JOURNAL_ALIAS']}.#{id}"
     end
 
+    # HARDCODED 
+    # We run into a problem with domain registration for neurolibre.github.io/preperints 
+    # Therefore we decided to add neurolibre.github.io/preprints to xml metadata.
     def pdf_url
-      "http://neurolibre.org/#{paper_repo}/#{joss_id}/#{ENV['DOI_PREFIX']}.#{joss_id}.pdf"
+      "https://neurolibre.github.io/#{paper_repo}/#{joss_id}/#{ENV['DOI_PREFIX']}.#{joss_id}.pdf"
     end
 
     def paper_org
@@ -371,13 +374,6 @@ module Whedon
       "#{ENV['JOURNAL_URL']}/papers/#{formatted_doi}"
     end
 
-    # NeuroLibre journal URL and PDF urls are not identical. 
-    # To properly locate PDFs, the preprints repo is hardcoded below. 
-    def neurolibre_pdf_url
-      "https://neurolibre.github.io/preperints/#{formatted_doi}"
-      #"#{Rails.application.settings["papers_html_url"]}/#{joss_id}/#{doi_to_file}.pdf"
-    end
-
     # Return the Review object associated with the Paper
     def review_issue
       review = Whedon::Review.new(review_issue_id, review_repository)

data/resources/crossref.template

@@ -77,7 +77,7 @@
           <resource>$joss_resource_url$</resource>
           <collection property="text-mining">
             <item>
-              <resource mime_type="application/pdf">$joss_resource_url$.pdf</resource>
+              <resource mime_type="application/pdf">$paper_url$</resource>
             </item>
           </collection>
         </doi_data>

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: roboneuro
 version: !ruby/object:Gem::Version
-  version: 0.1.7
+  version: 0.1.8
 platform: ruby
 authors:
 - Agah Karakuzu