ro-crate 0.4.10 → 0.4.11

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA256:
3
- metadata.gz: cb6b4eba94b7190b7888cf3b1ddc8a8c6d0b464834ff48c45d9b50e6b13844ce
4
- data.tar.gz: 70e0079caadfa3f17745e918f8109ec5908a8aa0c87d80aeaebfc55fdc03a9a8
3
+ metadata.gz: 62f3979b325743d31720f803dbf75690ad6b7b9bcf9f2cbf63d8200a2bb204ba
4
+ data.tar.gz: 3a229e06492a3f9a90721799f43929d6a5ca01fc0a0ff34d917eeebff037d9d4
5
5
  SHA512:
6
- metadata.gz: 62c9875be216987ceaca7e47f92112ba744109e4df9f8dcbba9023211ef3fc278f74f8ce7421523a0f443000f251627735eb01ce2357e9e526e36c23818bbba0
7
- data.tar.gz: 0b5be2eedc7a045ccf25db4e3d800107f30d00b62e1e4b5bdb1deed1eed941897f46621bef9fa9a012891bc058857de82d6afebeb122153f8ffc944b8ca06a7a
6
+ metadata.gz: 242b8e326756d51ab583726db7fb94763286f2764bdf1f0523cd9dab5fa560fe4da3016a4a4b84b0cc6bcef4ec096aeae7dc2fd344ef6cb5ee045cf99a954ef9
7
+ data.tar.gz: 4abaece91d997ac398ee627f639fc98c924768c255bac1bb6c9ce7f43fc03f5b018a2fc657008863c65537592261e85f697ef2c7e200c20621ba41ff0a933541
data/Gemfile.lock CHANGED
@@ -1,7 +1,7 @@
1
1
  PATH
2
2
  remote: .
3
3
  specs:
4
- ro-crate (0.4.10)
4
+ ro-crate (0.4.11)
5
5
  addressable (~> 2.7.0)
6
6
  rubyzip (~> 2.0.0)
7
7
 
@@ -12,19 +12,19 @@ GEM
12
12
  public_suffix (>= 2.0.2, < 5.0)
13
13
  crack (0.4.3)
14
14
  safe_yaml (~> 1.0.0)
15
- docile (1.3.1)
15
+ docile (1.3.5)
16
16
  hashdiff (1.0.1)
17
- json (2.3.1)
18
17
  power_assert (0.4.1)
19
18
  public_suffix (4.0.3)
20
19
  rake (13.0.0)
21
20
  rubyzip (2.0.0)
22
21
  safe_yaml (1.0.5)
23
- simplecov (0.16.1)
22
+ simplecov (0.21.2)
24
23
  docile (~> 1.1)
25
- json (>= 1.8, < 3)
26
- simplecov-html (~> 0.10.0)
27
- simplecov-html (0.10.2)
24
+ simplecov-html (~> 0.11)
25
+ simplecov_json_formatter (~> 0.1)
26
+ simplecov-html (0.12.3)
27
+ simplecov_json_formatter (0.1.2)
28
28
  test-unit (3.2.3)
29
29
  power_assert
30
30
  webmock (3.8.3)
@@ -39,7 +39,7 @@ PLATFORMS
39
39
  DEPENDENCIES
40
40
  rake (~> 13.0.0)
41
41
  ro-crate!
42
- simplecov (~> 0.16.1)
42
+ simplecov (~> 0.21.2)
43
43
  test-unit (~> 3.2.3)
44
44
  webmock (~> 3.8.3)
45
45
  yard (~> 0.9.25)
data/README.md CHANGED
@@ -17,6 +17,43 @@ and run `bundle install`.
17
17
 
18
18
  ## Usage
19
19
 
20
+ This gem consists a hierarchy of classes to model RO-Crate "entities": the crate itself, data entities
21
+ (files and directory) and contextual entities (with a limited set of specializations, such as `ROCrate::Person`).
22
+ They are all descendents of the `ROCrate::Entity` class, with the `ROCrate::Crate` class representing the crate itself.
23
+
24
+ The `ROCrate::Reader` class handles reading of RO-Crates into the above model, from a Zip file or directory.
25
+
26
+ The `ROCrate::Writer` class can write out an `ROCrate::Crate` instance into a Zip file or directory.
27
+
28
+ **Note:** for performance reasons, the gem is currently not linked-data aware and will allow you to set properties that
29
+ are not semantically valid.
30
+
31
+ ### Entities
32
+ Entities correspond to entries in the `@graph` of the RO-Crate's metadata JSON-LD file. Each entity class is
33
+ basically a wrapper around a set of JSON properties, with some convenience methods for getting/setting some
34
+ commonly used properties (`crate.name = "My first crate"`).
35
+
36
+ These convenience getter/setter methods will automatically handle turning objects into references and adding them to the
37
+ `@graph` if necessary.
38
+
39
+ ##### Getting/Setting Arbitrary Properties of Entities
40
+ As well as using the pre-defined getter/setter methods, you can get/set arbitrary properties like so.
41
+
42
+ To set the "creativeWorkStatus" property of the RO-Crate itself to a string literal:
43
+ ```ruby
44
+ crate['creativeWorkStatus'] = 'work-in-progress'
45
+ ```
46
+
47
+ If you want to reference other entities in the crate, you can get a JSON-LD reference from an entity object by using the `reference` method:
48
+ ```ruby
49
+ joe = crate.add_person('joe', { name: 'Joe Bloggs' }) # Add the entity to the @graph
50
+ crate['copyrightHolder'] = joe.reference # Reference the entity from the "copyrightHolder" property
51
+ ```
52
+ and to resolve those references back to the object, use the `dereference` method:
53
+ ```ruby
54
+ joe = crate['copyrightHolder'].dereference
55
+ ```
56
+
20
57
  ### Documentation
21
58
 
22
59
  [Click here for API documentation](https://www.researchobject.org/ro-crate-ruby/).
data/lib/ro_crate.rb CHANGED
@@ -14,6 +14,7 @@ require 'ro_crate/model/remote_entry'
14
14
  require 'ro_crate/model/entry'
15
15
  require 'ro_crate/model/directory'
16
16
  require 'ro_crate/model/metadata'
17
+ require 'ro_crate/model/preview_generator'
17
18
  require 'ro_crate/model/preview'
18
19
  require 'ro_crate/model/crate'
19
20
  require 'ro_crate/model/contextual_entity'
@@ -168,6 +168,15 @@ module ROCrate
168
168
  @preview ||= ROCrate::Preview.new(self)
169
169
  end
170
170
 
171
+ ##
172
+ # Set the RO-Crate preview file
173
+ # @param preview [Preview] the preview to set.
174
+ #
175
+ # @return [Preview]
176
+ def preview=(preview)
177
+ @preview = claim(preview)
178
+ end
179
+
171
180
  ##
172
181
  # All the entities within the crate. Includes contextual entities, data entities, the crate itself and its metadata file.
173
182
  #
@@ -3,6 +3,8 @@ module ROCrate
3
3
  # A class to represent a "Data Entity" within an RO-Crate.
4
4
  # Data Entities are the actual physical files and directories within the Crate.
5
5
  class DataEntity < Entity
6
+ properties(%w[name contentSize dateModified encodingFormat identifier sameAs author])
7
+
6
8
  def self.format_local_id(id)
7
9
  super.chomp('/')
8
10
  end
@@ -13,8 +15,6 @@ module ROCrate
13
15
  # @return [Class]
14
16
  def self.specialize(props)
15
17
  type = props['@type']
16
- id = props['@id']
17
- abs = URI(id)&.absolute? rescue false
18
18
  type = [type] unless type.is_a?(Array)
19
19
  if type.include?('Dataset')
20
20
  ROCrate::Directory
@@ -2,8 +2,6 @@ module ROCrate
2
2
  ##
3
3
  # A data entity that represents a directory of potentially many files and subdirectories (or none).
4
4
  class Directory < DataEntity
5
- properties(%w[name contentSize dateModified encodingFormat identifier sameAs])
6
-
7
5
  def self.format_local_id(id)
8
6
  super + '/'
9
7
  end
@@ -2,14 +2,12 @@ module ROCrate
2
2
  ##
3
3
  # A data entity that represents a single file.
4
4
  class File < DataEntity
5
- properties(%w[name contentSize dateModified encodingFormat identifier sameAs])
6
-
7
5
  ##
8
6
  # Create a new ROCrate::File. PLEASE NOTE, the new file will not be added to the crate. To do this, call
9
7
  # Crate#add_data_entity, or just use Crate#add_file.
10
8
  #
11
9
  # @param crate [Crate] The RO-Crate that owns this file.
12
- # @param source [String, Pathname, ::File, #read, URI, nil] The source on the disk (or on the internet if a URI) where this file will be read.
10
+ # @param source [String, Pathname, ::File, URI, nil, #read] The source on the disk (or on the internet if a URI) where this file will be read.
13
11
  # @param crate_path [String] The relative path within the RO-Crate where this file will be written.
14
12
  # @param properties [Hash{String => Object}] A hash of JSON-LD properties to associate with this file.
15
13
  def initialize(crate, source, crate_path = nil, properties = {})
@@ -17,7 +17,15 @@ module ROCrate
17
17
  # @return [String] The rendered JSON-LD as a "prettified" string.
18
18
  def generate
19
19
  graph = crate.entities.map(&:properties).reject(&:empty?)
20
- JSON.pretty_generate('@context' => CONTEXT, '@graph' => graph)
20
+ JSON.pretty_generate('@context' => context, '@graph' => graph)
21
+ end
22
+
23
+ def context
24
+ @context || CONTEXT
25
+ end
26
+
27
+ def context= c
28
+ @context = c
21
29
  end
22
30
 
23
31
  private
@@ -2,7 +2,7 @@ module ROCrate
2
2
  ##
3
3
  # A contextual entity that represents an organization.
4
4
  class Organization < ContextualEntity
5
- properties(['name'])
5
+ properties(%w[name])
6
6
 
7
7
  private
8
8
 
@@ -12,26 +12,14 @@ module ROCrate
12
12
  # @return [String]
13
13
  attr_accessor :template
14
14
 
15
- def initialize(crate, properties = {})
15
+ def initialize(crate, source = nil, properties = {})
16
+ source ||= PreviewGenerator.new(self)
16
17
  @template = nil
17
- super(crate, nil, IDENTIFIER, properties)
18
- end
19
-
20
- ##
21
- # Generate the crate's `ro-crate-preview.html`.
22
- # @return [String] The rendered HTML as a string.
23
- def generate
24
- b = crate.get_binding
25
- renderer = ERB.new(template || ::File.read(DEFAULT_TEMPLATE))
26
- renderer.result(b)
18
+ super(crate, source, IDENTIFIER, properties)
27
19
  end
28
20
 
29
21
  private
30
22
 
31
- def source
32
- Entry.new(StringIO.new(generate))
33
- end
34
-
35
23
  def default_properties
36
24
  {
37
25
  '@id' => IDENTIFIER,
@@ -0,0 +1,40 @@
1
+ require 'erb'
2
+
3
+ module ROCrate
4
+ ##
5
+ # A class to handle generation of an RO-Crate's preview HTML in an IO-like way (to fit into an Entry).
6
+ class PreviewGenerator
7
+ ##
8
+ # @param preview [Preview] The RO-Crate preview object.
9
+ def initialize(preview)
10
+ @preview = preview
11
+ end
12
+
13
+ def read(*args)
14
+ io.read(*args)
15
+ end
16
+
17
+ ##
18
+ # Generate the crate's `ro-crate-preview.html`.
19
+ # @return [String] The rendered HTML as a string.
20
+ def generate
21
+ b = crate.get_binding
22
+ renderer = ERB.new(template)
23
+ renderer.result(b)
24
+ end
25
+
26
+ def template
27
+ @preview.template || ::File.read(Preview::DEFAULT_TEMPLATE)
28
+ end
29
+
30
+ def crate
31
+ @preview.crate
32
+ end
33
+
34
+ private
35
+
36
+ def io
37
+ @io ||= StringIO.new(generate)
38
+ end
39
+ end
40
+ end
@@ -103,8 +103,12 @@ module ROCrate
103
103
  entry == ROCrate::Metadata::IDENTIFIER_1_0 }
104
104
 
105
105
  if metadata_file
106
- entities = entities_from_metadata(::File.read(::File.join(source, metadata_file)))
107
- build_crate(entities, source)
106
+ metadata_json = ::File.read(::File.join(source, metadata_file))
107
+ metadata = JSON.parse(metadata_json)
108
+ entities = entities_from_metadata(metadata)
109
+ context = metadata['@context']
110
+
111
+ build_crate(entities, source, context: context)
108
112
  else
109
113
  raise 'No metadata found!'
110
114
  end
@@ -113,10 +117,9 @@ module ROCrate
113
117
  ##
114
118
  # Extracts all the entities from the @graph of the RO-Crate Metadata.
115
119
  #
116
- # @param metadata_json [String] A string containing the metadata JSON.
120
+ # @param metadata [Hash] A Hash containing the parsed metadata JSON.
117
121
  # @return [Hash{String => Hash}] A Hash of all the entities, mapped by their @id.
118
- def self.entities_from_metadata(metadata_json)
119
- metadata = JSON.parse(metadata_json)
122
+ def self.entities_from_metadata(metadata)
120
123
  graph = metadata['@graph']
121
124
 
122
125
  if graph
@@ -129,6 +132,7 @@ module ROCrate
129
132
  # Do some normalization...
130
133
  entities[ROCrate::Metadata::IDENTIFIER] = extract_metadata_entity(entities)
131
134
  raise "No metadata entity found in @graph!" unless entities[ROCrate::Metadata::IDENTIFIER]
135
+ entities[ROCrate::Preview::IDENTIFIER] = extract_preview_entity(entities)
132
136
  entities[ROCrate::Crate::IDENTIFIER] = extract_root_entity(entities)
133
137
  raise "No root entity (with @id: #{entities[ROCrate::Metadata::IDENTIFIER].dig('about', '@id')}) found in @graph!" unless entities[ROCrate::Crate::IDENTIFIER]
134
138
 
@@ -139,25 +143,49 @@ module ROCrate
139
143
  end
140
144
 
141
145
  ##
142
- # Create a crate from the given set of entities.
146
+ # Create and populate crate from the given set of entities.
147
+ #
148
+ # @param entity_hash [Hash{String => Hash}] A Hash containing all the entities in the @graph, mapped by their @id.
149
+ # @param source [String, ::File, Pathname] The location of the RO-Crate being read.
150
+ # @param crate_class [Class] The class to use to instantiate the crate,
151
+ # useful if you have created a subclass of ROCrate::Crate that you want to use. (defaults to ROCrate::Crate).
152
+ # @param context [nil, String, Array, Hash] A custom JSON-LD @context (parsed), or nil to use default.
153
+ # @return [Crate] The RO-Crate.
154
+ def self.build_crate(entity_hash, source, crate_class: ROCrate::Crate, context:)
155
+ crate = initialize_crate(entity_hash, source, crate_class: crate_class, context: context)
156
+
157
+ extract_data_entities(crate, source, entity_hash).each do |entity|
158
+ crate.add_data_entity(entity)
159
+ end
160
+
161
+ # The remaining entities in the hash must be contextual.
162
+ extract_contextual_entities(crate, entity_hash).each do |entity|
163
+ crate.add_contextual_entity(entity)
164
+ end
165
+
166
+ crate
167
+ end
168
+
169
+ ##
170
+ # Initialize a crate from the given set of entities.
143
171
  #
144
172
  # @param entity_hash [Hash{String => Hash}] A Hash containing all the entities in the @graph, mapped by their @id.
145
173
  # @param source [String, ::File, Pathname] The location of the RO-Crate being read.
174
+ # @param crate_class [Class] The class to use to instantiate the crate,
175
+ # useful if you have created a subclass of ROCrate::Crate that you want to use. (defaults to ROCrate::Crate).
176
+ # @param context [nil, String, Array, Hash] A custom JSON-LD @context (parsed), or nil to use default.
146
177
  # @return [Crate] The RO-Crate.
147
- def self.build_crate(entity_hash, source)
148
- ROCrate::Crate.new.tap do |crate|
178
+ def self.initialize_crate(entity_hash, source, crate_class: ROCrate::Crate, context:)
179
+ crate_class.new.tap do |crate|
149
180
  crate.properties = entity_hash.delete(ROCrate::Crate::IDENTIFIER)
150
181
  crate.metadata.properties = entity_hash.delete(ROCrate::Metadata::IDENTIFIER)
182
+ crate.metadata.context = context
151
183
  preview_properties = entity_hash.delete(ROCrate::Preview::IDENTIFIER)
152
- crate.preview.properties = preview_properties if preview_properties
153
- crate.add_all(source, false)
154
- extract_data_entities(crate, source, entity_hash).each do |entity|
155
- crate.add_data_entity(entity)
156
- end
157
- # The remaining entities in the hash must be contextual.
158
- extract_contextual_entities(crate, entity_hash).each do |entity|
159
- crate.add_contextual_entity(entity)
184
+ if preview_properties
185
+ preview_path = ::File.join(source, ROCrate::Preview::IDENTIFIER)
186
+ crate.preview = ROCrate::Preview.new(crate, ::File.exists?(preview_path) ? Pathname.new(preview_path) : nil, preview_properties)
160
187
  end
188
+ crate.add_all(source, false)
161
189
  end
162
190
  end
163
191
 
@@ -229,8 +257,8 @@ module ROCrate
229
257
  ##
230
258
  # Extract the metadata entity from the entity hash, according to the rules defined here:
231
259
  # https://www.researchobject.org/ro-crate/1.1/root-data-entity.html#finding-the-root-data-entity
232
- # @return [Hash{String => Hash}] A Hash containing (hopefully) one value, the metadata entity's properties,
233
- # mapped by its @id.
260
+ # @return [nil, Hash{String => Hash}] A Hash containing (hopefully) one value, the metadata entity's properties
261
+ # mapped by its @id, or nil if nothing is found.
234
262
  def self.extract_metadata_entity(entities)
235
263
  key = entities.detect do |_, props|
236
264
  props.dig('conformsTo', '@id')&.start_with?(ROCrate::Metadata::RO_CRATE_BASE)
@@ -245,6 +273,13 @@ module ROCrate
245
273
  entities.delete(ROCrate::Metadata::IDENTIFIER_1_0))
246
274
  end
247
275
 
276
+ ##
277
+ # Extract the ro-crate-preview entity from the entity hash.
278
+ # @return [Hash{String => Hash}] A Hash containing the preview entity's properties mapped by its @id, or nil if nothing is found.
279
+ def self.extract_preview_entity(entities)
280
+ entities.delete("./#{ROCrate::Preview::IDENTIFIER}") || entities.delete(ROCrate::Preview::IDENTIFIER)
281
+ end
282
+
248
283
  ##
249
284
  # Extract the root entity from the entity hash, according to the rules defined here:
250
285
  # https://www.researchobject.org/ro-crate/1.1/root-data-entity.html#finding-the-root-data-entity
data/ro_crate.gemspec CHANGED
@@ -1,6 +1,6 @@
1
1
  Gem::Specification.new do |s|
2
2
  s.name = 'ro-crate'
3
- s.version = '0.4.10'
3
+ s.version = '0.4.11'
4
4
  s.summary = 'Create, manipulate, read RO-Crates.'
5
5
  s.authors = ['Finn Bacall']
6
6
  s.email = 'finn.bacall@manchester.ac.uk'
@@ -12,7 +12,7 @@ Gem::Specification.new do |s|
12
12
  s.add_runtime_dependency 'rubyzip', '~> 2.0.0'
13
13
  s.add_development_dependency 'rake', '~> 13.0.0'
14
14
  s.add_development_dependency 'test-unit', '~> 3.2.3'
15
- s.add_development_dependency 'simplecov', '~> 0.16.1'
15
+ s.add_development_dependency 'simplecov', '~> 0.21.2'
16
16
  s.add_development_dependency 'yard', '~> 0.9.25'
17
17
  s.add_development_dependency 'webmock', '~> 3.8.3'
18
18
  end
data/test/crate_test.rb CHANGED
@@ -164,6 +164,18 @@ class CrateTest < Test::Unit::TestCase
164
164
  assert_equal 2, crate1.contextual_entities.first.properties['cats']
165
165
  end
166
166
 
167
+ test 'sharing entities' do
168
+ crate = ROCrate::Crate.new
169
+ info = crate.add_file(fixture_file('info.txt'),'the_info.txt')
170
+ bob = crate.add_person('bob', name: 'Bob Jones')
171
+ crate.author = bob
172
+ info.author = bob
173
+
174
+ assert_equal [bob], crate.contextual_entities
175
+ assert_equal bob, info.author
176
+ assert_equal bob, crate.author
177
+ end
178
+
167
179
  test 'external files' do
168
180
  crate = ROCrate::Crate.new
169
181
  local = crate.add_file(fixture_file('info.txt'))
@@ -0,0 +1,176 @@
1
+
2
+ Apache License
3
+ Version 2.0, January 2004
4
+ http://www.apache.org/licenses/
5
+
6
+ TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
7
+
8
+ 1. Definitions.
9
+
10
+ "License" shall mean the terms and conditions for use, reproduction,
11
+ and distribution as defined by Sections 1 through 9 of this document.
12
+
13
+ "Licensor" shall mean the copyright owner or entity authorized by
14
+ the copyright owner that is granting the License.
15
+
16
+ "Legal Entity" shall mean the union of the acting entity and all
17
+ other entities that control, are controlled by, or are under common
18
+ control with that entity. For the purposes of this definition,
19
+ "control" means (i) the power, direct or indirect, to cause the
20
+ direction or management of such entity, whether by contract or
21
+ otherwise, or (ii) ownership of fifty percent (50%) or more of the
22
+ outstanding shares, or (iii) beneficial ownership of such entity.
23
+
24
+ "You" (or "Your") shall mean an individual or Legal Entity
25
+ exercising permissions granted by this License.
26
+
27
+ "Source" form shall mean the preferred form for making modifications,
28
+ including but not limited to software source code, documentation
29
+ source, and configuration files.
30
+
31
+ "Object" form shall mean any form resulting from mechanical
32
+ transformation or translation of a Source form, including but
33
+ not limited to compiled object code, generated documentation,
34
+ and conversions to other media types.
35
+
36
+ "Work" shall mean the work of authorship, whether in Source or
37
+ Object form, made available under the License, as indicated by a
38
+ copyright notice that is included in or attached to the work
39
+ (an example is provided in the Appendix below).
40
+
41
+ "Derivative Works" shall mean any work, whether in Source or Object
42
+ form, that is based on (or derived from) the Work and for which the
43
+ editorial revisions, annotations, elaborations, or other modifications
44
+ represent, as a whole, an original work of authorship. For the purposes
45
+ of this License, Derivative Works shall not include works that remain
46
+ separable from, or merely link (or bind by name) to the interfaces of,
47
+ the Work and Derivative Works thereof.
48
+
49
+ "Contribution" shall mean any work of authorship, including
50
+ the original version of the Work and any modifications or additions
51
+ to that Work or Derivative Works thereof, that is intentionally
52
+ submitted to Licensor for inclusion in the Work by the copyright owner
53
+ or by an individual or Legal Entity authorized to submit on behalf of
54
+ the copyright owner. For the purposes of this definition, "submitted"
55
+ means any form of electronic, verbal, or written communication sent
56
+ to the Licensor or its representatives, including but not limited to
57
+ communication on electronic mailing lists, source code control systems,
58
+ and issue tracking systems that are managed by, or on behalf of, the
59
+ Licensor for the purpose of discussing and improving the Work, but
60
+ excluding communication that is conspicuously marked or otherwise
61
+ designated in writing by the copyright owner as "Not a Contribution."
62
+
63
+ "Contributor" shall mean Licensor and any individual or Legal Entity
64
+ on behalf of whom a Contribution has been received by Licensor and
65
+ subsequently incorporated within the Work.
66
+
67
+ 2. Grant of Copyright License. Subject to the terms and conditions of
68
+ this License, each Contributor hereby grants to You a perpetual,
69
+ worldwide, non-exclusive, no-charge, royalty-free, irrevocable
70
+ copyright license to reproduce, prepare Derivative Works of,
71
+ publicly display, publicly perform, sublicense, and distribute the
72
+ Work and such Derivative Works in Source or Object form.
73
+
74
+ 3. Grant of Patent License. Subject to the terms and conditions of
75
+ this License, each Contributor hereby grants to You a perpetual,
76
+ worldwide, non-exclusive, no-charge, royalty-free, irrevocable
77
+ (except as stated in this section) patent license to make, have made,
78
+ use, offer to sell, sell, import, and otherwise transfer the Work,
79
+ where such license applies only to those patent claims licensable
80
+ by such Contributor that are necessarily infringed by their
81
+ Contribution(s) alone or by combination of their Contribution(s)
82
+ with the Work to which such Contribution(s) was submitted. If You
83
+ institute patent litigation against any entity (including a
84
+ cross-claim or counterclaim in a lawsuit) alleging that the Work
85
+ or a Contribution incorporated within the Work constitutes direct
86
+ or contributory patent infringement, then any patent licenses
87
+ granted to You under this License for that Work shall terminate
88
+ as of the date such litigation is filed.
89
+
90
+ 4. Redistribution. You may reproduce and distribute copies of the
91
+ Work or Derivative Works thereof in any medium, with or without
92
+ modifications, and in Source or Object form, provided that You
93
+ meet the following conditions:
94
+
95
+ (a) You must give any other recipients of the Work or
96
+ Derivative Works a copy of this License; and
97
+
98
+ (b) You must cause any modified files to carry prominent notices
99
+ stating that You changed the files; and
100
+
101
+ (c) You must retain, in the Source form of any Derivative Works
102
+ that You distribute, all copyright, patent, trademark, and
103
+ attribution notices from the Source form of the Work,
104
+ excluding those notices that do not pertain to any part of
105
+ the Derivative Works; and
106
+
107
+ (d) If the Work includes a "NOTICE" text file as part of its
108
+ distribution, then any Derivative Works that You distribute must
109
+ include a readable copy of the attribution notices contained
110
+ within such NOTICE file, excluding those notices that do not
111
+ pertain to any part of the Derivative Works, in at least one
112
+ of the following places: within a NOTICE text file distributed
113
+ as part of the Derivative Works; within the Source form or
114
+ documentation, if provided along with the Derivative Works; or,
115
+ within a display generated by the Derivative Works, if and
116
+ wherever such third-party notices normally appear. The contents
117
+ of the NOTICE file are for informational purposes only and
118
+ do not modify the License. You may add Your own attribution
119
+ notices within Derivative Works that You distribute, alongside
120
+ or as an addendum to the NOTICE text from the Work, provided
121
+ that such additional attribution notices cannot be construed
122
+ as modifying the License.
123
+
124
+ You may add Your own copyright statement to Your modifications and
125
+ may provide additional or different license terms and conditions
126
+ for use, reproduction, or distribution of Your modifications, or
127
+ for any such Derivative Works as a whole, provided Your use,
128
+ reproduction, and distribution of the Work otherwise complies with
129
+ the conditions stated in this License.
130
+
131
+ 5. Submission of Contributions. Unless You explicitly state otherwise,
132
+ any Contribution intentionally submitted for inclusion in the Work
133
+ by You to the Licensor shall be under the terms and conditions of
134
+ this License, without any additional terms or conditions.
135
+ Notwithstanding the above, nothing herein shall supersede or modify
136
+ the terms of any separate license agreement you may have executed
137
+ with Licensor regarding such Contributions.
138
+
139
+ 6. Trademarks. This License does not grant permission to use the trade
140
+ names, trademarks, service marks, or product names of the Licensor,
141
+ except as required for reasonable and customary use in describing the
142
+ origin of the Work and reproducing the content of the NOTICE file.
143
+
144
+ 7. Disclaimer of Warranty. Unless required by applicable law or
145
+ agreed to in writing, Licensor provides the Work (and each
146
+ Contributor provides its Contributions) on an "AS IS" BASIS,
147
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
148
+ implied, including, without limitation, any warranties or conditions
149
+ of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
150
+ PARTICULAR PURPOSE. You are solely responsible for determining the
151
+ appropriateness of using or redistributing the Work and assume any
152
+ risks associated with Your exercise of permissions under this License.
153
+
154
+ 8. Limitation of Liability. In no event and under no legal theory,
155
+ whether in tort (including negligence), contract, or otherwise,
156
+ unless required by applicable law (such as deliberate and grossly
157
+ negligent acts) or agreed to in writing, shall any Contributor be
158
+ liable to You for damages, including any direct, indirect, special,
159
+ incidental, or consequential damages of any character arising as a
160
+ result of this License or out of the use or inability to use the
161
+ Work (including but not limited to damages for loss of goodwill,
162
+ work stoppage, computer failure or malfunction, or any and all
163
+ other commercial damages or losses), even if such Contributor
164
+ has been advised of the possibility of such damages.
165
+
166
+ 9. Accepting Warranty or Additional Liability. While redistributing
167
+ the Work or Derivative Works thereof, You may choose to offer,
168
+ and charge a fee for, acceptance of support, warranty, indemnity,
169
+ or other liability obligations and/or rights consistent with this
170
+ License. However, in accepting such obligations, You may act only
171
+ on Your own behalf and on Your sole responsibility, not on behalf
172
+ of any other Contributor, and only if You agree to indemnify,
173
+ defend, and hold each Contributor harmless for any liability
174
+ incurred by, or claims asserted against, such Contributor by reason
175
+ of your accepting any such warranty or additional liability.
176
+
@@ -0,0 +1,6 @@
1
+ # Galaxy mini workflow
2
+
3
+ A tiny Galaxy workflow that sorts tabular lines according to the first column
4
+ and changes the text to upper case.
5
+
6
+ This RO-Crate is based on an [example from the Life Monitor repository](https://github.com/crs4/life_monitor/tree/8437be177822d0e2b3fed30db094b91c2fc14391/interaction_experiments/data/crates/ro-crate-galaxy-sortchangecase).
@@ -0,0 +1,133 @@
1
+ {
2
+ "@context": [
3
+ "https://w3id.org/ro/crate/1.1/context",
4
+ {
5
+ "TestSuite": "https://w3id.org/ro/terms/test#TestSuite",
6
+ "TestInstance": "https://w3id.org/ro/terms/test#TestInstance",
7
+ "TestService": "https://w3id.org/ro/terms/test#TestService",
8
+ "TestDefinition": "https://w3id.org/ro/terms/test#TestDefinition",
9
+ "PlanemoEngine": "https://w3id.org/ro/terms/test#PlanemoEngine",
10
+ "JenkinsService": "https://w3id.org/ro/terms/test#JenkinsService",
11
+ "TravisService": "https://w3id.org/ro/terms/test#TravisService",
12
+ "GithubService": "https://w3id.org/ro/terms/test#GithubService",
13
+ "instance": "https://w3id.org/ro/terms/test#instance",
14
+ "runsOn": "https://w3id.org/ro/terms/test#runsOn",
15
+ "resource": "https://w3id.org/ro/terms/test#resource",
16
+ "definition": "https://w3id.org/ro/terms/test#definition",
17
+ "engineVersion": "https://w3id.org/ro/terms/test#engineVersion"
18
+ }
19
+ ],
20
+ "@graph": [
21
+ {
22
+ "@id": "ro-crate-metadata.json",
23
+ "@type": "CreativeWork",
24
+ "about": {
25
+ "@id": "./"
26
+ },
27
+ "conformsTo": {
28
+ "@id": "https://w3id.org/ro/crate/1.1"
29
+ }
30
+ },
31
+ {
32
+ "@id": "./",
33
+ "@type": "Dataset",
34
+ "name": "sort-and-change-case",
35
+ "description": "sort lines and change text to upper case",
36
+ "license": "Apache-2.0",
37
+ "mainEntity": {
38
+ "@id": "sort-and-change-case.ga"
39
+ },
40
+ "hasPart": [
41
+ {
42
+ "@id": "sort-and-change-case.ga"
43
+ },
44
+ {
45
+ "@id": "LICENSE"
46
+ },
47
+ {
48
+ "@id": "README.md"
49
+ },
50
+ {
51
+ "@id": "test/test1/sort-and-change-case-test.yml"
52
+ }
53
+ ],
54
+ "mentions": [
55
+ {
56
+ "@id": "#test1"
57
+ }
58
+ ]
59
+ },
60
+ {
61
+ "@id": "sort-and-change-case.ga",
62
+ "@type": [
63
+ "File",
64
+ "SoftwareSourceCode",
65
+ "ComputationalWorkflow"
66
+ ],
67
+ "programmingLanguage": {
68
+ "@id": "#galaxy"
69
+ },
70
+ "name": "sort-and-change-case"
71
+ },
72
+ {
73
+ "@id": "LICENSE",
74
+ "@type": "File"
75
+ },
76
+ {
77
+ "@id": "README.md",
78
+ "@type": "File"
79
+ },
80
+ {
81
+ "@id": "#galaxy",
82
+ "@type": "ComputerLanguage",
83
+ "name": "Galaxy",
84
+ "identifier": {
85
+ "@id": "https://galaxyproject.org/"
86
+ },
87
+ "url": {
88
+ "@id": "https://galaxyproject.org/"
89
+ }
90
+ },
91
+ {
92
+ "@id": "#test1",
93
+ "name": "test1",
94
+ "@type": "TestSuite",
95
+ "mainEntity": {
96
+ "@id": "sort-and-change-case.ga"
97
+ },
98
+ "instance": [
99
+ {"@id": "#test1_1"}
100
+ ],
101
+ "definition": {"@id": "test/test1/sort-and-change-case-test.yml"}
102
+ },
103
+ {
104
+ "@id": "#test1_1",
105
+ "name": "test1_1",
106
+ "@type": "TestInstance",
107
+ "runsOn": {"@id": "https://w3id.org/ro/terms/test#JenkinsService"},
108
+ "url": "http://example.org/jenkins",
109
+ "resource": "job/tests/"
110
+ },
111
+ {
112
+ "@id": "test/test1/sort-and-change-case-test.yml",
113
+ "@type": [
114
+ "File",
115
+ "TestDefinition"
116
+ ],
117
+ "conformsTo": {"@id": "https://w3id.org/ro/terms/test#PlanemoEngine"},
118
+ "engineVersion": ">=0.70"
119
+ },
120
+ {
121
+ "@id": "https://w3id.org/ro/terms/test#JenkinsService",
122
+ "@type": "TestService",
123
+ "name": "Jenkins",
124
+ "url": {"@id": "https://www.jenkins.io"}
125
+ },
126
+ {
127
+ "@id": "https://w3id.org/ro/terms/test#PlanemoEngine",
128
+ "@type": "SoftwareApplication",
129
+ "name": "Planemo",
130
+ "url": {"@id": "https://github.com/galaxyproject/planemo"}
131
+ }
132
+ ]
133
+ }
@@ -0,0 +1,118 @@
1
+ {
2
+ "uuid": "e2a8566c-c025-4181-9e90-7ed29d4e4df1",
3
+ "tags": [],
4
+ "format-version": "0.1",
5
+ "name": "sort-and-change-case",
6
+ "version": 0,
7
+ "steps": {
8
+ "0": {
9
+ "tool_id": null,
10
+ "tool_version": null,
11
+ "outputs": [],
12
+ "workflow_outputs": [],
13
+ "input_connections": {},
14
+ "tool_state": "{}",
15
+ "id": 0,
16
+ "uuid": "5a36fad2-66c7-4b9e-8759-0fbcae9b8541",
17
+ "errors": null,
18
+ "name": "Input dataset",
19
+ "label": "bed_input",
20
+ "inputs": [],
21
+ "position": {
22
+ "top": 200,
23
+ "left": 200
24
+ },
25
+ "annotation": "",
26
+ "content_id": null,
27
+ "type": "data_input"
28
+ },
29
+ "1": {
30
+ "tool_id": "sort1",
31
+ "tool_version": "1.1.0",
32
+ "outputs": [
33
+ {
34
+ "type": "input",
35
+ "name": "out_file1"
36
+ }
37
+ ],
38
+ "workflow_outputs": [
39
+ {
40
+ "output_name": "out_file1",
41
+ "uuid": "8237f71a-bc2a-494e-a63c-09c1e65ef7c8",
42
+ "label": "sorted_bed"
43
+ }
44
+ ],
45
+ "input_connections": {
46
+ "input": {
47
+ "output_name": "output",
48
+ "id": 0
49
+ }
50
+ },
51
+ "tool_state": "{\"__page__\": null, \"style\": \"\\\"alpha\\\"\", \"column\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"column_set\": \"[]\", \"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"header_lines\": \"\\\"0\\\"\", \"order\": \"\\\"ASC\\\"\"}",
52
+ "id": 1,
53
+ "uuid": "0b6b3cda-c75f-452b-85b1-8ae4f3302ba4",
54
+ "errors": null,
55
+ "name": "Sort",
56
+ "post_job_actions": {},
57
+ "label": "sort",
58
+ "inputs": [
59
+ {
60
+ "name": "input",
61
+ "description": "runtime parameter for tool Sort"
62
+ }
63
+ ],
64
+ "position": {
65
+ "top": 200,
66
+ "left": 420
67
+ },
68
+ "annotation": "",
69
+ "content_id": "sort1",
70
+ "type": "tool"
71
+ },
72
+ "2": {
73
+ "tool_id": "ChangeCase",
74
+ "tool_version": "1.0.0",
75
+ "outputs": [
76
+ {
77
+ "type": "tabular",
78
+ "name": "out_file1"
79
+ }
80
+ ],
81
+ "workflow_outputs": [
82
+ {
83
+ "output_name": "out_file1",
84
+ "uuid": "c31cd733-dab6-4d50-9fec-b644d162397b",
85
+ "label": "uppercase_bed"
86
+ }
87
+ ],
88
+ "input_connections": {
89
+ "input": {
90
+ "output_name": "out_file1",
91
+ "id": 1
92
+ }
93
+ },
94
+ "tool_state": "{\"__page__\": null, \"casing\": \"\\\"up\\\"\", \"__rerun_remap_job_id__\": null, \"cols\": \"\\\"c1\\\"\", \"delimiter\": \"\\\"TAB\\\"\", \"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}",
95
+ "id": 2,
96
+ "uuid": "9698bcde-0729-48fe-b88d-ccfb6f6153b4",
97
+ "errors": null,
98
+ "name": "Change Case",
99
+ "post_job_actions": {},
100
+ "label": "change_case",
101
+ "inputs": [
102
+ {
103
+ "name": "input",
104
+ "description": "runtime parameter for tool Change Case"
105
+ }
106
+ ],
107
+ "position": {
108
+ "top": 200,
109
+ "left": 640
110
+ },
111
+ "annotation": "",
112
+ "content_id": "ChangeCase",
113
+ "type": "tool"
114
+ }
115
+ },
116
+ "annotation": "",
117
+ "a_galaxy_workflow": "true"
118
+ }
@@ -0,0 +1,3 @@
1
+ chr1 66999824 67210768
2
+ chr7 48998526 50489626
3
+ chr1 66874821 66010368
@@ -0,0 +1,3 @@
1
+ CHR1 66874821 66010368
2
+ CHR1 66999824 67210768
3
+ CHR7 48998526 50489626
@@ -0,0 +1,8 @@
1
+ - doc: test with a small input
2
+ job:
3
+ bed_input:
4
+ class: File
5
+ path: input.bed
6
+ outputs:
7
+ uppercase_bed:
8
+ path: output_exp.bed
@@ -1,66 +1,67 @@
1
1
  <!DOCTYPE html>
2
2
  <html>
3
3
  <head>
4
- <title>New RO-Crate</title>
5
- <script type="application/ld+json">{
6
- "@context": "https://w3id.org/ro/crate/1.1/context",
7
- "@graph": [
8
- {
9
- "@id": "ro-crate-metadata.jsonld",
10
- "@type": "CreativeWork",
11
- "about": {
12
- "@id": "./"
13
- }
14
- },
15
- {
16
- "@id": "ro-crate-preview.html",
17
- "@type": "CreativeWork",
18
- "about": {
19
- "@id": "./"
20
- }
21
- },
22
- {
23
- "@id": "./",
24
- "@type": "Dataset",
25
- "hasPart": [
26
- {
27
- "@id": "fish/"
28
- }
29
- ]
30
- },
31
- {
32
- "@id": "fish/",
33
- "@type": "Dataset"
34
- }
35
- ]
36
- }</script>
37
- <meta name="generator" content="https://github.com/fbacall/ro-crate-ruby">
38
- <meta name="keywords" content="RO-Crate">
4
+ <title>New RO-Crate</title>
5
+ <script type="application/ld+json">{
6
+ "@context": "https://w3id.org/ro/crate/1.0/context",
7
+ "@graph": [
8
+ {
9
+ "@id": "ro-crate-metadata.jsonld",
10
+ "@type": "CreativeWork",
11
+ "about": {
12
+ "@id": "./"
13
+ }
14
+ },
15
+ {
16
+ "@id": "ro-crate-preview.html",
17
+ "@type": "CreativeWork",
18
+ "about": {
19
+ "@id": "./"
20
+ }
21
+ },
22
+ {
23
+ "@id": "./",
24
+ "@type": "Dataset",
25
+ "hasPart": [
26
+ {
27
+ "@id": "listed_file.txt"
28
+ }
29
+ ]
30
+ },
31
+ {
32
+ "@id": "listed_file.txt",
33
+ "@type": "File"
34
+ }
35
+ ]
36
+ }</script>
37
+ <meta name="generator" content="https://github.com/fbacall/ro-crate-ruby">
38
+ <meta name="keywords" content="RO-Crate">
39
39
  </head>
40
40
  <body>
41
- <h1>New RO-Crate</h1>
42
-
43
- <p>
44
-
45
- </p>
46
- <dl>
47
-
48
-
49
-
50
-
51
- </dl>
41
+ <h1>New RO-Crate</h1>
42
+ Some stuff has been added here blablabla
52
43
 
53
- <h2>Contents</h2>
54
- <ul>
55
-
56
- <li id="__data_entity_fish/">
57
-
58
- <strong>fish/</strong>
59
-
60
-
61
-
62
- </li>
63
-
64
- </ul>
44
+ <p>
45
+
46
+ </p>
47
+ <dl>
48
+
49
+
50
+
51
+
52
+ </dl>
53
+
54
+ <h2>Contents</h2>
55
+ <ul>
56
+
57
+ <li id="__data_entity_listed_file.txt">
58
+
59
+ <strong>listed_file.txt</strong>
60
+
61
+
62
+
63
+ </li>
64
+
65
+ </ul>
65
66
  </body>
66
- </html>
67
+ </html>
data/test/reader_test.rb CHANGED
@@ -227,4 +227,28 @@ class ReaderTest < Test::Unit::TestCase
227
227
  assert crate.entries['fish/data/binary.jpg']
228
228
  assert_equal ['./', 'fish/', 'ro-crate-metadata.json', 'ro-crate-preview.html'], crate.entities.map(&:id).sort
229
229
  end
230
+
231
+ test 'reading preserves any additions to @context' do
232
+ crate = ROCrate::Reader.read_directory(fixture_file('ro-crate-galaxy-sortchangecase').path)
233
+
234
+ context = crate.metadata.context
235
+ assert_equal [
236
+ 'https://w3id.org/ro/crate/1.1/context',
237
+ {
238
+ 'TestSuite' => 'https://w3id.org/ro/terms/test#TestSuite',
239
+ 'TestInstance' => 'https://w3id.org/ro/terms/test#TestInstance',
240
+ 'TestService' => 'https://w3id.org/ro/terms/test#TestService',
241
+ 'TestDefinition' => 'https://w3id.org/ro/terms/test#TestDefinition',
242
+ 'PlanemoEngine' => 'https://w3id.org/ro/terms/test#PlanemoEngine',
243
+ 'JenkinsService' => 'https://w3id.org/ro/terms/test#JenkinsService',
244
+ 'TravisService' => 'https://w3id.org/ro/terms/test#TravisService',
245
+ 'GithubService' => 'https://w3id.org/ro/terms/test#GithubService',
246
+ 'instance' => 'https://w3id.org/ro/terms/test#instance',
247
+ 'runsOn' => 'https://w3id.org/ro/terms/test#runsOn',
248
+ 'resource' => 'https://w3id.org/ro/terms/test#resource',
249
+ 'definition' => 'https://w3id.org/ro/terms/test#definition',
250
+ 'engineVersion' => 'https://w3id.org/ro/terms/test#engineVersion'
251
+ }
252
+ ], context
253
+ end
230
254
  end
data/test/writer_test.rb CHANGED
@@ -124,12 +124,32 @@ class WriterTest < Test::Unit::TestCase
124
124
  actual_files = Dir.chdir(dir) { Dir.glob('**/*') }
125
125
  assert_equal expected_files, actual_files
126
126
  expected_files.each do |file|
127
- next if file == 'ro-crate-metadata.jsonld' # Expected context gets updated.
128
- next if file == 'ro-crate-preview.html' # RO-Crate preview format changed
129
127
  abs_file_path = ::File.join(fixture, file)
130
128
  next if ::File.directory?(abs_file_path)
131
129
  assert_equal ::File.read(abs_file_path), ::File.read(::File.join(dir, file)), "#{file} didn't match"
132
130
  end
133
131
  end
134
132
  end
133
+
134
+ test 'reading/writing multiple times does not change the crate' do
135
+ input_dir = fixture_file('sparse_directory_crate').path
136
+ Dir.mktmpdir do |dir|
137
+ 3.times do |i|
138
+ output_dir = ::File.join(dir, "new_directory_#{i}")
139
+ crate = ROCrate::Reader.read(input_dir)
140
+
141
+ ROCrate::Writer.new(crate).write(output_dir)
142
+ expected_files = Dir.chdir(input_dir) { Dir.glob('**/*') }
143
+ actual_files = Dir.chdir(output_dir) { Dir.glob('**/*') }
144
+ assert_equal expected_files, actual_files
145
+ expected_files.each do |file|
146
+ abs_file_path = ::File.join(input_dir, file)
147
+ next if ::File.directory?(abs_file_path)
148
+ assert_equal ::File.read(abs_file_path), ::File.read(::File.join(output_dir, file)), "#{file} didn't match"
149
+ end
150
+
151
+ input_dir = output_dir
152
+ end
153
+ end
154
+ end
135
155
  end
metadata CHANGED
@@ -1,14 +1,14 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: ro-crate
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.4.10
4
+ version: 0.4.11
5
5
  platform: ruby
6
6
  authors:
7
7
  - Finn Bacall
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2021-03-09 00:00:00.000000000 Z
11
+ date: 2021-04-30 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: addressable
@@ -72,14 +72,14 @@ dependencies:
72
72
  requirements:
73
73
  - - "~>"
74
74
  - !ruby/object:Gem::Version
75
- version: 0.16.1
75
+ version: 0.21.2
76
76
  type: :development
77
77
  prerelease: false
78
78
  version_requirements: !ruby/object:Gem::Requirement
79
79
  requirements:
80
80
  - - "~>"
81
81
  - !ruby/object:Gem::Version
82
- version: 0.16.1
82
+ version: 0.21.2
83
83
  - !ruby/object:Gem::Dependency
84
84
  name: yard
85
85
  requirement: !ruby/object:Gem::Requirement
@@ -137,6 +137,7 @@ files:
137
137
  - lib/ro_crate/model/organization.rb
138
138
  - lib/ro_crate/model/person.rb
139
139
  - lib/ro_crate/model/preview.rb
140
+ - lib/ro_crate/model/preview_generator.rb
140
141
  - lib/ro_crate/model/remote_entry.rb
141
142
  - lib/ro_crate/reader.rb
142
143
  - lib/ro_crate/ro-crate-preview.html.erb
@@ -166,6 +167,13 @@ files:
166
167
  - test/fixtures/file with spaces.txt
167
168
  - test/fixtures/info.txt
168
169
  - test/fixtures/nested_directory.zip
170
+ - test/fixtures/ro-crate-galaxy-sortchangecase/LICENSE
171
+ - test/fixtures/ro-crate-galaxy-sortchangecase/README.md
172
+ - test/fixtures/ro-crate-galaxy-sortchangecase/ro-crate-metadata.json
173
+ - test/fixtures/ro-crate-galaxy-sortchangecase/sort-and-change-case.ga
174
+ - test/fixtures/ro-crate-galaxy-sortchangecase/test/test1/input.bed
175
+ - test/fixtures/ro-crate-galaxy-sortchangecase/test/test1/output_exp.bed
176
+ - test/fixtures/ro-crate-galaxy-sortchangecase/test/test1/sort-and-change-case-test.yml
169
177
  - test/fixtures/spaces/file with spaces.txt
170
178
  - test/fixtures/spaces/ro-crate-metadata.jsonld
171
179
  - test/fixtures/sparse_directory_crate.zip