rdf 3.1.0 → 3.1.5
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- checksums.yaml +4 -4
- data/AUTHORS +1 -1
- data/README.md +43 -9
- data/VERSION +1 -1
- data/bin/rdf +2 -2
- data/etc/doap.nt +74 -80
- data/lib/rdf.rb +16 -11
- data/lib/rdf/changeset.rb +86 -18
- data/lib/rdf/cli.rb +11 -3
- data/lib/rdf/mixin/enumerable.rb +1 -0
- data/lib/rdf/mixin/mutable.rb +3 -13
- data/lib/rdf/mixin/queryable.rb +8 -0
- data/lib/rdf/mixin/writable.rb +9 -14
- data/lib/rdf/model/dataset.rb +1 -1
- data/lib/rdf/model/graph.rb +3 -0
- data/lib/rdf/model/statement.rb +30 -7
- data/lib/rdf/model/uri.rb +10 -10
- data/lib/rdf/nquads.rb +2 -2
- data/lib/rdf/ntriples.rb +6 -4
- data/lib/rdf/ntriples/reader.rb +28 -3
- data/lib/rdf/ntriples/writer.rb +9 -0
- data/lib/rdf/query.rb +4 -1
- data/lib/rdf/query/hash_pattern_normalizer.rb +9 -8
- data/lib/rdf/query/pattern.rb +49 -16
- data/lib/rdf/query/solution.rb +20 -1
- data/lib/rdf/query/solutions.rb +15 -5
- data/lib/rdf/query/variable.rb +17 -5
- data/lib/rdf/reader.rb +65 -20
- data/lib/rdf/repository.rb +27 -13
- data/lib/rdf/util.rb +6 -5
- data/lib/rdf/util/cache.rb +2 -2
- data/lib/rdf/util/coercions.rb +60 -0
- data/lib/rdf/util/file.rb +3 -3
- data/lib/rdf/util/logger.rb +1 -1
- data/lib/rdf/vocab/owl.rb +401 -86
- data/lib/rdf/vocab/rdfs.rb +81 -18
- data/lib/rdf/vocab/rdfv.rb +122 -1
- data/lib/rdf/vocab/writer.rb +43 -4
- data/lib/rdf/vocab/xsd.rb +203 -2
- data/lib/rdf/vocabulary.rb +105 -11
- data/lib/rdf/writer.rb +21 -5
- metadata +9 -8
@@ -77,14 +77,15 @@ module RDF; class Query
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##
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# Returns the normalization of the specified `hash_pattern`.
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#
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# @
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#
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#
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#
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#
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#
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#
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#
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+
# @overload normalize!(hash_pattern, **options)
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# @param [Hash{Symbol => Object}] hash_pattern (Hash.new)
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# the query pattern as a hash.
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# @param [Hash{Symbol => Object}] **options
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# any additional normalization options.
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# @option options [String] :anonymous_subject_format ("__%s__")
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# the string format for anonymous subjects.
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# @return [Hash{Symbol => Object}]
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# the resulting query pattern as a normalized hash.
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def normalize!(*args)
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hash_pattern = args.shift
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options = args.shift || {}
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data/lib/rdf/query/pattern.rb
CHANGED
@@ -50,10 +50,12 @@ module RDF; class Query
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# Estmate cost positionally, with variables being least expensive as objects, then predicates, then subjects, then graph_names.
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# XXX does not consider bound variables, which would need to be dynamically calculated.
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-
@cost = (@object.nil? || @object.is_a?(Variable) ?
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-
(@predicate.nil? || @predicate.is_a?(Variable) ?
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-
(@subject.nil? || @subject.is_a?(Variable) ?
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-
(@graph_name.is_a?(Variable) ?
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+
@cost = (@object.nil? || @object.is_a?(Variable) ? 8 : 0) +
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(@predicate.nil? || @predicate.is_a?(Variable) ? 4 : 0) +
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(@subject.nil? || @subject.is_a?(Variable) ? 2 : 0) +
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(@graph_name.is_a?(Variable) ? 1 : 0) +
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(@object.is_a?(Pattern) ? (@object.cost * 4) : 0) +
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(@subject.is_a?(Pattern) ? (@subject.cost * 2) : 0)
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super
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end
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@@ -84,10 +86,10 @@ module RDF; class Query
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# @return [Boolean] `true` or `false`
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# @since 0.3.0
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def has_variables?
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-
subject.
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-
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-
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-
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subject && subject.variable? ||
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predicate && predicate.variable? ||
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object && object.variable? ||
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graph_name && graph_name.variable?
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end
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alias_method :variables?, :has_variables?
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@@ -117,13 +119,33 @@ module RDF; class Query
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false
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end
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##
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# Checks pattern equality against a statement, considering nesting.
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#
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# * A pattern which has a pattern as a subject or an object, matches
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# a statement having a statement as a subject or an object using {#eql?}.
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#
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# @param [Statement] other
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# @return [Boolean]
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#
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# @see RDF::URI#==
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# @see RDF::Node#==
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# @see RDF::Literal#==
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# @see RDF::Query::Variable#==
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def eql?(other)
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return false unless other.is_a?(Statement) && (self.graph_name || false) == (other.graph_name || false)
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+
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predicate == other.predicate &&
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(subject.is_a?(Pattern) ? subject.eql?(other.subject) : subject == other.subject) &&
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(object.is_a?(Pattern) ? object.eql?(other.object) : object == other.object)
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end
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##
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# Executes this query pattern on the given `queryable` object.
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#
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# Values are matched using using Queryable#query_pattern.
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#
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# If the optional `bindings` are given, variables will be substituted with their values
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# when executing the query.
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# If the optional `bindings` are given, variables will be substituted with their values when executing the query.
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#
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# To match triples only in the default graph, set graph_name to `false`.
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#
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@@ -198,6 +220,8 @@ module RDF; class Query
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solution[predicate.to_sym] = statement.predicate if predicate.is_a?(Variable)
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solution[object.to_sym] = statement.object if object.is_a?(Variable)
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solution[graph_name.to_sym] = statement.graph_name if graph_name.is_a?(Variable)
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solution.merge!(subject.solution(statement.subject)) if subject.is_a?(Pattern)
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solution.merge!(object.solution(statement.object)) if object.is_a?(Pattern)
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end
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end
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@@ -229,7 +253,8 @@ module RDF; class Query
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# @return [Integer] (0..3)
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def variable_count
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[subject, predicate, object, graph_name].inject(0) do |memo, term|
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-
memo += (term.is_a?(Variable) ? 1 :
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memo += (term.is_a?(Variable) ? 1 :
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(term.is_a?(Pattern) ? term.variable_count : 0))
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end
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end
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alias_method :cardinality, :variable_count
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@@ -243,7 +268,7 @@ module RDF; class Query
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# @return [Hash{Symbol => Variable}]
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def variables
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[subject, predicate, object, graph_name].inject({}) do |memo, term|
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term.
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term && term.variable? ? memo.merge(term.variables) : memo
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end
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end
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@@ -254,8 +279,10 @@ module RDF; class Query
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# @return [self]
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def bind(solution)
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self.to_quad.each_with_index do |term, index|
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-
if term
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if term.is_a?(Variable) && solution[term]
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self[index] = solution[term]
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elsif term.is_a?(Pattern)
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term.bind(solution)
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end
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end
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self
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@@ -283,9 +310,9 @@ module RDF; class Query
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# @return [Hash{Symbol => RDF::Term}]
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def bindings
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bindings = {}
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-
bindings.merge!(subject.bindings) if subject.
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bindings.merge!(subject.bindings) if subject && subject.variable?
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bindings.merge!(predicate.bindings) if predicate.is_a?(Variable)
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bindings.merge!(object.bindings) if object.
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bindings.merge!(object.bindings) if object && object.variable?
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bindings.merge!(graph_name.bindings) if graph_name.is_a?(Variable)
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bindings
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end
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@@ -330,7 +357,13 @@ module RDF; class Query
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StringIO.open do |buffer| # FIXME in RDF::Statement
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buffer << 'OPTIONAL ' if optional?
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buffer << [subject, predicate, object].map do |r|
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r.is_a?(RDF::Query::Variable)
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if r.is_a?(RDF::Query::Variable)
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r.to_s
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elsif r.is_a?(RDF::Query::Pattern)
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"<<#{r.to_s[0..-3]}>>"
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else
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RDF::NTriples.serialize(r)
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end
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end.join(" ")
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buffer << case graph_name
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when nil, false then " ."
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data/lib/rdf/query/solution.rb
CHANGED
@@ -195,12 +195,31 @@ class RDF::Query
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# Merges the bindings from the given `other` query solution into this
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# one, overwriting any existing ones having the same name.
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#
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# ## RDFStar (RDF*)
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#
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# If merging a binding for a statement to a pattern,
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# merge their embedded solutions.
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#
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# @param [RDF::Query::Solution, #to_h] other
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# another query solution or hash bindings
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# @return [void] self
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# @since 0.3.0
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def merge!(other)
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@bindings.merge!(other.to_h)
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@bindings.merge!(other.to_h) do |key, v1, v2|
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# Don't merge a pattern over a statement
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# This happens because JOIN does a reverse merge,
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# and a pattern is set in v2.
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v2.is_a?(Pattern) ? v1 : v2
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end
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# Merge bindings from patterns
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embedded_solutions = []
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@bindings.each do |k, v|
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if v.is_a?(Pattern) && other[k].is_a?(RDF::Statement)
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embedded_solutions << v.solution(other[k])
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end
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end
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# Merge embedded solutions
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embedded_solutions.each {|soln| merge!(soln)}
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self
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end
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data/lib/rdf/query/solutions.rb
CHANGED
@@ -66,13 +66,15 @@ module RDF; class Query
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#
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# @return [Array<Symbol>]
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def variable_names
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-
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-
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-
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@variable_names ||= begin
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variables = self.inject({}) do |result, solution|
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solution.each_name do |name|
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result[name] ||= true
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end
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result
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end
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-
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variables.keys
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end
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-
variables.keys
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end
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##
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@@ -136,6 +138,7 @@ module RDF; class Query
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# @yieldreturn [Boolean]
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# @return [self]
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def filter(criteria = {})
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@variable_names = nil
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if block_given?
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self.reject! do |solution|
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!yield(solution.is_a?(Solution) ? solution : Solution.new(solution))
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@@ -223,6 +226,13 @@ module RDF; class Query
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solution.bindings.delete_if { |k, v| !variables.include?(k.to_sym) }
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end
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end
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+
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# Make sure variable_names are ordered by projected variables
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projected_vars, vars = variables.map(&:to_sym), variable_names
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vars = variable_names
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+
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# Maintain projected order, and add any non-projected variables
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@variable_names = (projected_vars & vars) + (vars - projected_vars)
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self
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end
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alias_method :select, :project
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data/lib/rdf/query/variable.rb
CHANGED
@@ -157,12 +157,24 @@ class RDF::Query
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##
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# Rebinds this variable to the given `value`.
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#
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# @
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#
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# @overload bind(value)
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# @param [RDF::Query::Solution] value
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# @return [self] the bound variable
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#
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# @overload bind(value)
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# @param [RDF::Term] value
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# @return [RDF::Term] the previous value, if any.
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def bind(value)
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-
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-
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-
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+
if value.is_a?(RDF::Query::Solution)
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self.value = value.to_h.fetch(name, self.value)
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self
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else
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warn "[DEPRECATION] RDF::Query::Variable#bind should be used with a solution, not a term.\n" +
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"Called from #{Gem.location_of_caller.join(':')}"
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old_value = self.value
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self.value = value
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old_value
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end
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end
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alias_method :bind!, :bind
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data/lib/rdf/reader.rb
CHANGED
@@ -121,6 +121,12 @@ module RDF
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# @return [Array<RDF::CLI::Option>]
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def self.options
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[
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RDF::CLI::Option.new(
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symbol: :base_uri,
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control: :url,
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datatype: RDF::URI,
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on: ["--uri URI"],
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description: "Base URI of input file, defaults to the filename.") {|arg| RDF::URI(arg)},
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RDF::CLI::Option.new(
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symbol: :canonicalize,
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datatype: TrueClass,
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@@ -153,11 +159,11 @@ module RDF
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end
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end,
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RDF::CLI::Option.new(
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-
symbol: :
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control: :
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-
datatype:
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on: ["--
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-
description: "
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+
symbol: :rdfstar,
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control: :select,
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datatype: [:PG, :SA],
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on: ["--rdf-star MODE"],
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+
description: "Parse RDF*, either in Property Graph mode (PG) or Separate Assertions mode (SA).") {|arg| arg.to_sym},
|
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RDF::CLI::Option.new(
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symbol: :validate,
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datatype: TrueClass,
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@@ -261,42 +267,48 @@ module RDF
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#
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# @param [IO, File, String] input
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# the input stream to read
|
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-
# @param [
|
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-
# the
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-
#
|
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-
# whether to validate the parsed statements and values
|
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+
# @param [#to_s] base_uri (nil)
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+
# the base URI to use when resolving relative URIs (not supported by
|
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# all readers)
|
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# @param [Boolean] canonicalize (false)
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# whether to canonicalize parsed literals
|
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+
# @param [Encoding] encoding (Encoding::UTF_8)
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# the encoding of the input stream
|
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# @param [Boolean] intern (true)
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# whether to intern all parsed URIs
|
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+
# @param [:PG, :SA] rdfstar (nil)
|
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+
# support parsing RDF* statement resources.
|
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+
# If `:PG`, referenced statements are also emitted.
|
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+
# If `:SA`, referenced statements are not emitted.
|
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# @param [Hash] prefixes (Hash.new)
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# the prefix mappings to use (not supported by all readers)
|
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|
-
# @param [#to_s] base_uri (nil)
|
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|
-
# the base URI to use when resolving relative URIs (not supported by
|
276
|
-
# all readers)
|
277
285
|
# @param [Hash{Symbol => Object}] options
|
278
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|
# any additional options
|
287
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+
# @param [Boolean] validate (false)
|
288
|
+
# whether to validate the parsed statements and values
|
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|
# @yield [reader] `self`
|
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|
# @yieldparam [RDF::Reader] reader
|
281
291
|
# @yieldreturn [void] ignored
|
282
292
|
def initialize(input = $stdin,
|
283
|
-
|
284
|
-
validate: false,
|
293
|
+
base_uri: nil,
|
285
294
|
canonicalize: false,
|
295
|
+
encoding: Encoding::UTF_8,
|
286
296
|
intern: true,
|
287
297
|
prefixes: Hash.new,
|
288
|
-
|
298
|
+
rdfstar: nil,
|
299
|
+
validate: false,
|
289
300
|
**options,
|
290
301
|
&block)
|
291
302
|
|
292
303
|
base_uri ||= input.base_uri if input.respond_to?(:base_uri)
|
293
304
|
@options = options.merge({
|
294
|
-
|
295
|
-
validate: validate,
|
305
|
+
base_uri: base_uri,
|
296
306
|
canonicalize: canonicalize,
|
307
|
+
encoding: encoding,
|
297
308
|
intern: intern,
|
298
309
|
prefixes: prefixes,
|
299
|
-
|
310
|
+
rdfstar: rdfstar,
|
311
|
+
validate: validate
|
300
312
|
})
|
301
313
|
|
302
314
|
@input = case input
|
@@ -389,6 +401,9 @@ module RDF
|
|
389
401
|
# Statements are yielded in the order that they are read from the input
|
390
402
|
# stream.
|
391
403
|
#
|
404
|
+
# If the `rdfstar` option is `:PG` and triples include
|
405
|
+
# embedded statements, they are also enumerated.
|
406
|
+
#
|
392
407
|
# @overload each_statement
|
393
408
|
# @yield [statement]
|
394
409
|
# each statement
|
@@ -405,7 +420,11 @@ module RDF
|
|
405
420
|
def each_statement(&block)
|
406
421
|
if block_given?
|
407
422
|
begin
|
408
|
-
loop
|
423
|
+
loop do
|
424
|
+
st = read_statement
|
425
|
+
block.call(st)
|
426
|
+
each_pg_statement(st, &block) if options[:rdfstar] == :PG
|
427
|
+
end
|
409
428
|
rescue EOFError
|
410
429
|
rewind rescue nil
|
411
430
|
end
|
@@ -422,6 +441,9 @@ module RDF
|
|
422
441
|
# Triples are yielded in the order that they are read from the input
|
423
442
|
# stream.
|
424
443
|
#
|
444
|
+
# If the `rdfstar` option is `:PG` and triples include
|
445
|
+
# embedded statements, they are also enumerated.
|
446
|
+
#
|
425
447
|
# @overload each_triple
|
426
448
|
# @yield [subject, predicate, object]
|
427
449
|
# each triple
|
@@ -439,7 +461,14 @@ module RDF
|
|
439
461
|
def each_triple(&block)
|
440
462
|
if block_given?
|
441
463
|
begin
|
442
|
-
loop
|
464
|
+
loop do
|
465
|
+
triple = read_triple
|
466
|
+
block.call(*triple)
|
467
|
+
if options[:rdfstar] == :PG
|
468
|
+
block.call(*triple[0].to_a) if triple[0].is_a?(Statement)
|
469
|
+
block.call(*triple[2].to_a) if triple[2].is_a?(Statement)
|
470
|
+
end
|
471
|
+
end
|
443
472
|
rescue EOFError
|
444
473
|
rewind rescue nil
|
445
474
|
end
|
@@ -550,6 +579,22 @@ module RDF
|
|
550
579
|
log_error("Expected object (found: #{current_line.inspect})", lineno: lineno, exception: RDF::ReaderError)
|
551
580
|
end
|
552
581
|
|
582
|
+
##
|
583
|
+
# Recursively emit embedded statements in Property Graph mode
|
584
|
+
#
|
585
|
+
# @param [RDF::Statement] statement
|
586
|
+
def each_pg_statement(statement, &block)
|
587
|
+
if statement.subject.is_a?(Statement)
|
588
|
+
block.call(statement.subject)
|
589
|
+
each_pg_statement(statement.subject, &block)
|
590
|
+
end
|
591
|
+
|
592
|
+
if statement.object.is_a?(Statement)
|
593
|
+
block.call(statement.object)
|
594
|
+
each_pg_statement(statement.object, &block)
|
595
|
+
end
|
596
|
+
end
|
597
|
+
|
553
598
|
public
|
554
599
|
##
|
555
600
|
# Returns the encoding of the input stream.
|
data/lib/rdf/repository.rb
CHANGED
@@ -182,6 +182,7 @@ module RDF
|
|
182
182
|
when :validity then @options.fetch(:with_validity, true)
|
183
183
|
when :literal_equality then true
|
184
184
|
when :atomic_write then false
|
185
|
+
when :rdfstar then false
|
185
186
|
when :snapshots then false
|
186
187
|
else false
|
187
188
|
end
|
@@ -266,6 +267,7 @@ module RDF
|
|
266
267
|
when :validity then @options.fetch(:with_validity, true)
|
267
268
|
when :literal_equality then true
|
268
269
|
when :atomic_write then true
|
270
|
+
when :rdfstar then true
|
269
271
|
when :snapshots then true
|
270
272
|
else false
|
271
273
|
end
|
@@ -340,7 +342,14 @@ module RDF
|
|
340
342
|
# @see Mutable#apply_changeset
|
341
343
|
def apply_changeset(changeset)
|
342
344
|
data = @data
|
343
|
-
changeset.deletes.each
|
345
|
+
changeset.deletes.each do |del|
|
346
|
+
if del.constant?
|
347
|
+
data = delete_from(data, del)
|
348
|
+
else
|
349
|
+
# we need this condition to handle wildcard statements
|
350
|
+
query_pattern(del) { |stmt| data = delete_from(data, stmt) }
|
351
|
+
end
|
352
|
+
end
|
344
353
|
changeset.inserts.each { |ins| data = insert_to(data, ins) }
|
345
354
|
@data = data
|
346
355
|
end
|
@@ -388,20 +397,25 @@ module RDF
|
|
388
397
|
graph_name.eql?(c)
|
389
398
|
|
390
399
|
ss = if subject.nil? || subject.is_a?(RDF::Query::Variable)
|
391
|
-
|
392
|
-
|
393
|
-
|
394
|
-
|
395
|
-
|
396
|
-
|
400
|
+
ss
|
401
|
+
elsif subject.is_a?(RDF::Query::Pattern)
|
402
|
+
# Match subjects which are statements matching this pattern
|
403
|
+
ss.keys.select {|s| s.statement? && subject.eql?(s)}.inject({}) do |memo, st|
|
404
|
+
memo.merge(st => ss[st])
|
405
|
+
end
|
406
|
+
elsif ss.has_key?(subject)
|
407
|
+
{ subject => ss[subject] }
|
408
|
+
else
|
409
|
+
[]
|
410
|
+
end
|
397
411
|
ss.each do |s, ps|
|
398
412
|
ps = if predicate.nil? || predicate.is_a?(RDF::Query::Variable)
|
399
|
-
|
400
|
-
|
401
|
-
|
402
|
-
|
403
|
-
|
404
|
-
|
413
|
+
ps
|
414
|
+
elsif ps.has_key?(predicate)
|
415
|
+
{ predicate => ps[predicate] }
|
416
|
+
else
|
417
|
+
[]
|
418
|
+
end
|
405
419
|
ps.each do |p, os|
|
406
420
|
os.each do |o, object_options|
|
407
421
|
next unless object.nil? || object.eql?(o)
|