rbbt-util 5.5.64 → 5.5.65

checksums.yaml

@@ -1,15 +1,7 @@
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data/lib/rbbt/util/misc.rb

@@ -1417,7 +1417,8 @@ module IndiferentHash
   end
 
   def [](key)
-    res = super(key) and return res
+    res = super(key) 
+    return res unless res.nil?
 
     case key
     when Symbol, Module

data/lib/rbbt/util/named_array.rb

@@ -29,7 +29,8 @@ module NamedArray
     template = entity_templates[field]
     entity_templates ||= {}
     if template and template.respond_to?(:annotate)
-      entity = template.annotate(entity.frozen? ? entity.dup : entity)
+      begin entity = entity.dup if entity.frozen?;  rescue; end
+      entity = template.annotate(entity)
       entity.extend AnnotatedArray if Array === entity
       entity
     else
@@ -39,7 +40,8 @@ module NamedArray
         template = Misc.prepare_entity("ENTITY_TEMPLATE", field, options)
         if template.respond_to?(:annotate)
           entity_templates[field] = template
-          entity = template.annotate(entity.frozen? ? entity.dup : entity)
+          begin entity = entity.dup if entity.frozen?;  rescue; end
+          entity = template.annotate(entity)
           entity.extend AnnotatedArray if Array === entity
           entity
         else

data/lib/rbbt/util/open.rb

@@ -190,7 +190,7 @@ module Open
 
   def self.rm_rf(file)
     if (dir_sub_path = find_repo_dir(file))
-      remove_from_repo(*dir_sub_path, true)
+      remove_from_repo(dir_sub_path[0], dir_sub_path[1], true)
     else
       FileUtils.rm_rf(file)
     end

metadata

@@ -1,111 +1,111 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-util
 version: !ruby/object:Gem::Version
-  version: 5.5.64
+  version: 5.5.65
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2013-12-30 00:00:00.000000000 Z
+date: 2014-01-20 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rake
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
   name: progress-monitor
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
   name: lockfile
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
   name: spreadsheet
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
   name: highline
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
   name: narray
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
   name: term-ansicolor
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - ! '>='
+    - - ">="
       - !ruby/object:Gem::Version
         version: '0'
 - !ruby/object:Gem::Dependency
@@ -278,17 +278,17 @@ require_paths:
 - lib
 required_ruby_version: !ruby/object:Gem::Requirement
   requirements:
-  - - ! '>='
+  - - ">="
     - !ruby/object:Gem::Version
       version: '0'
 required_rubygems_version: !ruby/object:Gem::Requirement
   requirements:
-  - - ! '>='
+  - - ">="
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 2.2.0
+rubygems_version: 2.2.1
 signing_key: 
 specification_version: 4
 summary: Utilities for the Ruby Bioinformatics Toolkit (rbbt)