rbbt-util 5.17.89 → 5.18.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/etc/app.d/finder.rb +4 -0
- data/lib/rbbt/workflow/accessor.rb +3 -4
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: ab39fdc1ea50f9747effe02d0c7008a288194a88
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4
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data.tar.gz: 4359eaf63e8c0592bb0d035099bd94e1e12fa3b9
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5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: cccceae6eee4bbc8d64dcfc8e9791c7e7b00ee32bfec839ff3bb914b2511c29b1382acf626f641e1b38c022caabe347492ea3eb1315f5a5b06b01dbc3d2a312c
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7
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data.tar.gz: dc1dc72ef5f0f69f36d81b9b7bbfcb8f84c5259618aa9e466967a750e13192eeaed3a5d69589fbbbead6347d3df8306cb22e43c098de7414b5fb91f049dc5adb
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data/etc/app.d/finder.rb
CHANGED
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@@ -11,6 +11,10 @@ if ENV['RBBT_FINDER']
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mi_hash = {"Mutated Isoform" => /ENSP\w+:.+/}
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finder.add_instance(mi_hash, :namespace => organism)
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+
prot_hash = {"Ensembl Protein ID" => /ENSP\w+$/}
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finder.add_instance(prot_hash, :namespace => organism)
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+
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+
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organism_hash = {"organism" => /[A-Z][a-z]{2}(?:\/[a-z]{3}20\d\d)?/}
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finder.add_instance(organism_hash, :namespace => organism)
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16
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end
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@@ -586,10 +586,9 @@ module Workflow
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if inputs.any? or dependencies.any?
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tagged_jobname = case TAG
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when :hash
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-
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-
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-
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jobname + '_' << Misc.digest(input_str)
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+
input_hash = Hash[*(1..inputs.length).zip(inputs).flatten]
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hash_str = Misc.hash2md5(input_hash)
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+
jobname + '_' << hash_str
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else
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jobname
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end
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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name: rbbt-util
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version: !ruby/object:Gem::Version
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4
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-
version: 5.
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4
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+
version: 5.18.0
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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-
date: 2015-11-
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+
date: 2015-11-22 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: rake
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