rbbt-study 0.2.5 → 0.2.6
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- checksums.yaml +8 -8
- data/lib/rbbt/entity/study/genotypes.rb +0 -2
- metadata +2 -2
checksums.yaml
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!binary "U0hBMQ==":
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@@ -7,7 +7,6 @@ require 'rbbt/entity/study/genotypes/enrichment'
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require 'rbbt/entity/study/genotypes/knowledge_base'
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Workflow.require_workflow "NKIWorkflow"
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Workflow.require_workflow "TSVWorkflow"
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module StudyWorkflow
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helper :organism do
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mutation_significance = NKIWorkflow.job(:significantly_mutated, study, :study => study, :threshold => 0.1).run
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log :significance, "Reordering mutation significance file"
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#TSVWorkflow.job(:change_id, study, :format => "Ensembl Gene ID", :tsv => mutation_significance).run
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mutation_significance.identifiers = Organism.identifiers(study.organism)
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mutation_significance = mutation_significance.change_key "Ensembl Gene ID"
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metadata
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--- !ruby/object:Gem::Specification
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name: rbbt-study
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version: !ruby/object:Gem::Version
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version: 0.2.
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version: 0.2.6
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2013-10-
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date: 2013-10-31 00:00:00.000000000 Z
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dependencies: []
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description: This gem add the study entity with suport for NGS, Microarray and other
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types of data
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