rbbt-study 0.2.5 → 0.2.6
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- checksums.yaml +8 -8
- data/lib/rbbt/entity/study/genotypes.rb +0 -2
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,15 +1,15 @@
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---
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!binary "U0hBMQ==":
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metadata.gz: !binary |-
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-
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+
YjU1MDk3MzlhY2VjMDZmZGFmMDViZWQyOTE3MzQ3OTFiMmVmYTBlOA==
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data.tar.gz: !binary |-
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-
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M2NmYmE2NTMzOWU3MTc1OWI2YjE1Mjc2NzBkMzc4Nzk2NTY4MDAzMg==
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!binary "U0hBNTEy":
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metadata.gz: !binary |-
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-
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9
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ZDQ2MjcyNGFiYjNkMTM4MDc3ZThiMjNkM2E2NGExZTViZTJjYTcyNzE3YTQ5
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10
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ZWM2NGJkZDNiNzkwZDBkMzA2NjBmNmEwZmZiYTAzM2YzMmQ4ZGQzNWQ5Yjkw
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NWFmNTg4OWY4MWU1NGM3MzkwMmVlNjY5MDM0MjRmNWU0YjlkZTk=
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data.tar.gz: !binary |-
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-
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-
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MDc3YzRhMzE3OTc3ODkyYzRmM2I2MDdmMTQzNWM3MjY5NWI2NGZhZGU3MzU5
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N2RhYzFjNzNjZGJhMmNhMzcyZWFhMTMxYzU0M2U3N2ZjMDg2NmNlZTY3MTll
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ZmQ5Y2EzMmY1OTAzMmEwM2RiYzA3ZGVkODM3YTZiMGQzOWM0MDI=
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@@ -7,7 +7,6 @@ require 'rbbt/entity/study/genotypes/enrichment'
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require 'rbbt/entity/study/genotypes/knowledge_base'
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Workflow.require_workflow "NKIWorkflow"
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-
Workflow.require_workflow "TSVWorkflow"
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module StudyWorkflow
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helper :organism do
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@@ -39,7 +38,6 @@ module StudyWorkflow
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mutation_significance = NKIWorkflow.job(:significantly_mutated, study, :study => study, :threshold => 0.1).run
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log :significance, "Reordering mutation significance file"
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-
#TSVWorkflow.job(:change_id, study, :format => "Ensembl Gene ID", :tsv => mutation_significance).run
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mutation_significance.identifiers = Organism.identifiers(study.organism)
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mutation_significance = mutation_significance.change_key "Ensembl Gene ID"
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: rbbt-study
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version: !ruby/object:Gem::Version
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-
version: 0.2.
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version: 0.2.6
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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-
date: 2013-10-
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date: 2013-10-31 00:00:00.000000000 Z
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dependencies: []
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description: This gem add the study entity with suport for NGS, Microarray and other
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types of data
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