rbbt-study 0.2.22 → 0.2.23

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data/lib/rbbt/entity/study/cnv/samples.rb

@@ -1,10 +1,10 @@
 module Sample
   property :cnvs => :array2single do
-    study.cnv_cohort
+    study.has_cnv? ? study.cnv_cohort : {}
   end
 
   property :has_cnv? => :array2single do
-    study.cnv_cohort.values_at(*self).collect{|cnvs| not cnvs.nil?}
+    study.has_cnv? ? cnvs.values_at(*self).collect{|cnvs| not cnvs.nil?} : [false] * self.length
   end
 
   property :gene_CN => :single do

data/lib/rbbt/entity/study/methylation/samples.rb

@@ -1,10 +1,10 @@
 module Sample
   property :methylation => :array2single do
-    study.methylation_cohort
+    study.has_methylation? ? study.methylation_cohort : {}
   end
 
   property :has_methylation? => :array2single do
-    study.methylation_cohort.values_at(*self).collect{|methylation| not methylation.nil?}
+    study.has_methylation? ? study.methylation_cohort.values_at(*self).collect{|methylation| not methylation.nil?} : [false] * self.length
   end
   
   property :methylated => :single do

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-study
 version: !ruby/object:Gem::Version
-  version: 0.2.22
+  version: 0.2.23
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2013-12-17 00:00:00.000000000 Z
+date: 2013-12-30 00:00:00.000000000 Z
 dependencies: []
 description: This gem add the study entity with suport for NGS, Microarray and other
   types of data