rbbt-study 0.2.12 → 0.2.13
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +8 -8
- data/lib/rbbt/entity/study/samples.rb +1 -1
- data/lib/rbbt/entity/study.rb +13 -5
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,15 +1,15 @@
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---
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!binary "U0hBMQ==":
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metadata.gz: !binary |-
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-
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+
MDEwOTcwMzliOWZlZDBlMmIyOGY5NDdmOTk3N2FlNGY3ZWU5ZWQxMg==
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data.tar.gz: !binary |-
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-
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ZWFhZjg2ZThiYTkwMzdlNzZkYTYwOGRhMGIxZDFkMDYyNTIzMTAyZg==
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SHA512:
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metadata.gz: !binary |-
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-
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OTNjZTBmYzY2ZDUyYjRiNWZhZWZlMDY4OGU3NjA2YzY5ZmU0NGY4NDBjYzMw
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MWU4OGM5NjhjZTdmNjAwMGNjZjcxMWJkZjEzOTQ0MWExZTk2YTM4YjNmM2Jm
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ZWU0OTA5YTQ4MGRiZDVhNGMxNDdiNzY3NjJlNWQ4OGRhZmI0ODU=
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data.tar.gz: !binary |-
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-
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YmM2ODMzODlkZjk2M2Y1N2YzMGVjYTVlZWI2NDg0YTJjMGNlZjdmNThmMGMw
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ZGM2YjkzYTllMDcwODEwOTdlNTk1YTMyOTE2OTg0ODRiMDAwNTkxNGZiZGRl
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OGM2ODFmOWQ4MDQxZjdkNTE5ZjFjOGU1ZGUxYThmMzg5M2M1MGI=
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data/lib/rbbt/entity/study.rb
CHANGED
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@@ -51,9 +51,9 @@ module Study
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@study_dir ||= begin
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case
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when (not defined?(Rbbt))
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File.join(ENV["HOME"], '.studies')
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Path.setup(File.join(ENV["HOME"], '.studies'))
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when Rbbt.etc.study_dir.exists?
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Rbbt.etc.study_dir.read.chomp
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Path.setup(Rbbt.etc.study_dir.read.chomp)
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else
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Rbbt.studies.find
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end
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@@ -88,13 +88,16 @@ module Study
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end
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def self.extended(base)
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-
setup_file = File.join(base.dir, 'setup.rb')
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base.workflow = StudyWorkflow.clone
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base.workflow.study = base
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-
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+
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if File.exists?(setup_file = File.join(base.dir, 'setup.rb'))
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base.instance_eval Open.read(setup_file), setup_file
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end
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+
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base.local_persist_dir = Rbbt.var.cache.studies[base].persistence.find
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base
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end
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def self.studies
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@@ -103,7 +106,12 @@ module Study
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end
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def dir
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@dir ||= Path === Study.study_dir
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@dir ||= if Path === Study.study_dir
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Study.study_dir[self]
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else
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Path.setup(File.join(Study.study_dir.dup, self), nil, Study)
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end
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@dir
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end
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def metadata
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: rbbt-study
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version: !ruby/object:Gem::Version
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version: 0.2.
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version: 0.2.13
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2013-11-
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date: 2013-11-15 00:00:00.000000000 Z
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dependencies: []
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description: This gem add the study entity with suport for NGS, Microarray and other
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types of data
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