rbbt-study 0.2.0
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- checksums.yaml +15 -0
- data/LICENSE.txt +20 -0
- data/README.rdoc +19 -0
- data/lib/rbbt/entity/study/cnv/genes.rb +28 -0
- data/lib/rbbt/entity/study/cnv/samples.rb +55 -0
- data/lib/rbbt/entity/study/cnv.rb +170 -0
- data/lib/rbbt/entity/study/enrichment.rb +418 -0
- data/lib/rbbt/entity/study/expression.rb +19 -0
- data/lib/rbbt/entity/study/features.rb +17 -0
- data/lib/rbbt/entity/study/genes.rb +104 -0
- data/lib/rbbt/entity/study/genotypes/enrichment.rb +56 -0
- data/lib/rbbt/entity/study/genotypes/genes.rb +103 -0
- data/lib/rbbt/entity/study/genotypes/knowledge_base.rb +39 -0
- data/lib/rbbt/entity/study/genotypes/mutations.rb +34 -0
- data/lib/rbbt/entity/study/genotypes/samples.rb +28 -0
- data/lib/rbbt/entity/study/genotypes.rb +110 -0
- data/lib/rbbt/entity/study/knowledge_base.rb +36 -0
- data/lib/rbbt/entity/study/methylation/samples.rb +31 -0
- data/lib/rbbt/entity/study/methylation.rb +90 -0
- data/lib/rbbt/entity/study/mutations.rb +259 -0
- data/lib/rbbt/entity/study/plots.rb +142 -0
- data/lib/rbbt/entity/study/samples.rb +61 -0
- data/lib/rbbt/entity/study/snp.rb +87 -0
- data/lib/rbbt/entity/study.rb +151 -0
- metadata +69 -0
metadata
ADDED
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--- !ruby/object:Gem::Specification
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name: rbbt-study
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version: !ruby/object:Gem::Version
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version: 0.2.0
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2013-10-21 00:00:00.000000000 Z
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dependencies: []
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description: This gem add the study entity with suport for NGS, Microarray and other
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types of data
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email: miguel.vazquez@cnio.es
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executables: []
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extensions: []
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extra_rdoc_files:
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- LICENSE.txt
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- README.rdoc
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files:
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- lib/rbbt/entity/study.rb
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- lib/rbbt/entity/study/cnv.rb
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- lib/rbbt/entity/study/cnv/genes.rb
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- lib/rbbt/entity/study/cnv/samples.rb
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- lib/rbbt/entity/study/enrichment.rb
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- lib/rbbt/entity/study/expression.rb
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- lib/rbbt/entity/study/features.rb
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- lib/rbbt/entity/study/genes.rb
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- lib/rbbt/entity/study/genotypes.rb
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- lib/rbbt/entity/study/genotypes/enrichment.rb
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- lib/rbbt/entity/study/genotypes/genes.rb
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- lib/rbbt/entity/study/genotypes/knowledge_base.rb
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- lib/rbbt/entity/study/genotypes/mutations.rb
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- lib/rbbt/entity/study/genotypes/samples.rb
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- lib/rbbt/entity/study/knowledge_base.rb
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- lib/rbbt/entity/study/methylation.rb
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- lib/rbbt/entity/study/methylation/samples.rb
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- lib/rbbt/entity/study/mutations.rb
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- lib/rbbt/entity/study/plots.rb
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- lib/rbbt/entity/study/samples.rb
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- lib/rbbt/entity/study/snp.rb
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- LICENSE.txt
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- README.rdoc
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homepage: http://github.com/mikisvaz/rbbt-study
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licenses:
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- MIT
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metadata: {}
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post_install_message:
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rdoc_options: []
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require_paths:
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- lib
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required_ruby_version: !ruby/object:Gem::Requirement
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requirements:
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- - ! '>='
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- !ruby/object:Gem::Version
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version: '0'
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required_rubygems_version: !ruby/object:Gem::Requirement
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requirements:
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- - ! '>='
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- !ruby/object:Gem::Version
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version: '0'
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requirements: []
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rubyforge_project:
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rubygems_version: 2.0.3
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signing_key:
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specification_version: 4
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summary: Genomic study entity
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test_files: []
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