rbbt-sources 3.1.5 → 3.1.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/rbbt/sources/clinvar.rb +0 -2
- data/lib/rbbt/sources/uniprot.rb +1 -1
- metadata +11 -11
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 1a2f9d5c13961a7fa8a3c948367f312ad15ae555
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4
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data.tar.gz: e6ec67742de00219a229d9cc4db6bc4a6fff67fd
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 0f06fd95e0e4ad122ebbd35bca6cd878de70ee2cc251e99296d055cdbefa055132daf0329f3f2491624e905ac7dad5fb63edada9a88da027639afe2dc8e4e307
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7
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+
data.tar.gz: f85b6b37937b24c7a282a0d07c2e567e4db3bb816ef40a12d31f7eaf65bcbe3c1886cad923a73e6732394325161ff7750bf76dba8100aa5db3d91f0224498342
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data/lib/rbbt/sources/clinvar.rb
CHANGED
data/lib/rbbt/sources/uniprot.rb
CHANGED
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@@ -150,7 +150,7 @@ module UniProt
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150
150
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when value.match(/(\d+) (\d+) (.*)/)
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start, eend, description = $1, $2, $3
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description.gsub(/^FT\s+/m, '')
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153
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-
when value.match(
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153
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+
when value.match(/^\s+(\d+) (\d+)/)
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start, eend = $1, $2
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description = nil
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else
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: rbbt-sources
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 3.1.
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4
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+
version: 3.1.7
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Miguel Vazquez
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8
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autorequire:
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bindir: bin
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cert_chain: []
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11
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-
date:
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11
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+
date: 2016-09-06 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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14
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name: rbbt-util
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@@ -180,19 +180,19 @@ signing_key:
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specification_version: 4
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summary: Data sources for the Ruby Bioinformatics Toolkit (rbbt)
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test_files:
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183
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+
- test/test_helper.rb
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183
184
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- test/rbbt/sources/test_pubmed.rb
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184
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-
- test/rbbt/sources/
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185
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-
- test/rbbt/sources/test_biomart.rb
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185
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+
- test/rbbt/sources/test_string.rb
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186
186
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- test/rbbt/sources/test_gscholar.rb
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187
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-
- test/rbbt/sources/
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187
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+
- test/rbbt/sources/test_biomart.rb
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188
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+
- test/rbbt/sources/test_go.rb
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188
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- test/rbbt/sources/test_pina.rb
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189
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- test/rbbt/sources/test_entrez.rb
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191
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+
- test/rbbt/sources/test_pharmagkb.rb
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192
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+
- test/rbbt/sources/test_organism.rb
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190
193
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- test/rbbt/sources/test_matador.rb
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191
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-
- test/rbbt/sources/
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194
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+
- test/rbbt/sources/test_tfacts.rb
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195
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+
- test/rbbt/sources/test_kegg.rb
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192
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- test/rbbt/sources/test_synapse.rb
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193
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-
- test/rbbt/sources/test_go.rb
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197
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- test/rbbt/sources/test_stitch.rb
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195
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-
- test/rbbt/sources/
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196
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-
- test/rbbt/sources/test_string.rb
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197
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- test/rbbt/sources/test_tfacts.rb
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198
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-
- test/test_helper.rb
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198
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+
- test/rbbt/sources/test_HPRD.rb
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