rbbt-sources 3.1.28 → 3.1.29
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/rbbt/sources/pubmed.rb +9 -1
- data/test/rbbt/sources/test_pubmed.rb +8 -0
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 14ec519ad1a7309351fadacf8d418b197c931769
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4
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data.tar.gz: 8426ce938123e929a04a07bbb6c0ab5d12be6b04
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5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: d817ada6d2df2a355dd3ac7ae6c98d3261f029bd9a82a02e45c0022118ff88b99e5ead63c6d424c6a522e0c4d89f66ac4b0c00c33d4007cd9462dbb8b3923ba6
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7
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data.tar.gz: adf03a5ba5263bcb10877e8823826b9239cbabc73e9fe81ace8b2d21e2da0505d6a350f7c36f44efe73af0257863ec0077b6a7255abbb7daa3dfba857b6717bc
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data/lib/rbbt/sources/pubmed.rb
CHANGED
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@@ -257,11 +257,19 @@ module PubMed
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257
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result[pmid] = xml
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end
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ids.each{|id| next if id.nil? or result[id]; fid = id.sub(/^0+/,''); next unless result[fid]; result[id] = result[fid]}
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ids.each{|id| next if id.nil? or result[id]; result[id] = ""}
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+
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result
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end
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articles = {}
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-
pmids.each
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267
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pmids.each do |id|
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268
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next if id.nil? or result_files[id].nil?
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269
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txt = Open.read(result_files[id])
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next if txt.empty?
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articles[id] = Article.new(txt)
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end
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if _array
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articles
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@@ -31,6 +31,14 @@ class TestPubMed < Test::Unit::TestCase
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assert("vazquez2008sent", PubMed::Article.make_bibentry('vazquez', 2008, "SENT: Semantic features in text"))
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assert("vazquez2008aes", PubMed::Article.make_bibentry('vazquez', 2008, "An Example System"))
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end
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+
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def test_missing
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36
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pmids = '18627426,014966295'.split(",")
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Log.severity = 0
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assert PubMed.get_article(pmids).include? "014966295"
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assert ! PubMed.get_article(pmids).include?("18627426")
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end
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+
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end
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
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--- !ruby/object:Gem::Specification
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name: rbbt-sources
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version: !ruby/object:Gem::Version
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4
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-
version: 3.1.
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4
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version: 3.1.29
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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-
date:
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11
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+
date: 2018-01-15 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: rbbt-util
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