rbbt-dm 1.1.15 → 1.1.16
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/rbbt/statistics/random_walk.rb +12 -8
- data/lib/rbbt/statistics/rank_product.rb +0 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 0ae479006dfc634dda28affa527fd67a90215c95
|
4
|
+
data.tar.gz: d6b3e24779cf07cf276dc7273338e9bf04ed5f49
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: ecc5a24854bc69ccc075f652430f31db3e9e769b23ca87e2aa4c76441ccc5bedff2898e1575e28b83fb52f15f309e861cb528235c14f6e7b0b81c5d87c556f89
|
7
|
+
data.tar.gz: 2ccfacc38784a9c4fe83e8e82ddebb7f17ab6ae9a93c703c51632e7fb6e0ca7e5443979bffeab0ded34f9298e0b553c8e78b362567e8d0cb89368e120f99d8e4
|
@@ -260,15 +260,19 @@ module RandomWalk
|
|
260
260
|
repo_file = "/tmp/rw_repo7"
|
261
261
|
repo = Persist.open_tokyocabinet(repo_file, false, :float_array)
|
262
262
|
key = Misc.digest([size, total, missing, times, scoring_method].inspect)
|
263
|
-
|
264
|
-
|
265
|
-
repo[key]
|
266
|
-
|
267
|
-
|
268
|
-
|
269
|
-
repo
|
263
|
+
begin
|
264
|
+
repo.read
|
265
|
+
if repo[key]
|
266
|
+
repo[key]
|
267
|
+
else
|
268
|
+
p = permutations(size, total, missing, times)
|
269
|
+
repo.write_and_close do
|
270
|
+
repo[key] = p
|
271
|
+
end
|
272
|
+
p
|
270
273
|
end
|
271
|
-
|
274
|
+
ensure
|
275
|
+
repo.close
|
272
276
|
end
|
273
277
|
end
|
274
278
|
|
@@ -63,7 +63,6 @@ module TSV
|
|
63
63
|
|
64
64
|
signature_sizes = fields.collect{|field| slice(field).values.select{|v| v and not (v.respond_to?(:empty?) and v.empty?)}.length}
|
65
65
|
|
66
|
-
#score = RankProduct.score(positions, fields.collect{ tsv.size })
|
67
66
|
score = RankProduct.score(positions, signature_sizes)
|
68
67
|
|
69
68
|
score
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: rbbt-dm
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.1.
|
4
|
+
version: 1.1.16
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Miguel Vazquez
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2015-10-
|
11
|
+
date: 2015-10-26 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: rbbt-util
|