quorum 0.1.0 → 0.2.0

data/lib/generators/templates/blast_db.rb

@@ -0,0 +1,106 @@
+$LOAD_PATH.unshift(File.expand_path("../../", __FILE__))
+
+require 'logger'
+
+module Quorum
+  module FetchTools
+    #
+    # Blast DB Fetch Tool
+    #
+    class BlastDb
+
+      # blastdbcmd -dbtype
+      DB_TYPE = {
+        "blastn"  => "nucl",
+        "blastx"  => "prot",
+        "tblastn" => "nucl",
+        "blastp"  => "prot"
+      }
+
+      private
+
+      def initialize(args)
+        @tool           = args[:fetch_tool]
+        @entry          = args[:blast_hit_id]
+        @hit_display_id = args[:blast_hit_display_id]
+        @blast_algo     = args[:blast_algo]
+        @log_directory  = args[:log_directory]
+        @tmp_directory  = args[:tmp_directory]
+        @fetch_database = args[:fetch_database]
+        @databases      = args[:fetch_database_names]
+
+        @logger = Quorum::Logger.new(@log_directory)
+
+        @db = @databases.split(';')
+        @db.map! { |d| File.join(@fetch_database, d) }
+
+        @db_type = DB_TYPE[@blast_algo]
+        @db_type ||= 'guess'
+      end
+
+      #
+      # Generate the blastdbcmd(s).
+      #
+      def generate_blast_db_cmds
+        @cmds = []
+        @db.each do |d|
+          blastdbcmd = "blastdbcmd " <<
+          "-db '#{d}' " <<
+          "-dbtype '#{@db_type}' " <<
+          "-entry '#{@entry}' "
+          @cmds << blastdbcmd
+        end
+      end
+
+      #
+      # Parse the blastdbcmd returned sequence(s) and delete if @hit_display_id
+      # is not present.
+      #
+      def parse_and_send_results
+        seqs = @seqs.split('>')
+        seqs.delete_if { |s| s.empty? || !s.include?(@hit_display_id) }
+        if seqs.length != 1
+          @logger.log(
+            "Quorum::FetchTools::BlastDb#parse_and_send_results",
+            "blastdbcmd returned #{seqs.length} sequence(s). Please ensure " <<
+            "your Blast database source FASTA headers are unique across ALL " <<
+            "databases. See the entry above for details."
+          )
+          "An error occurred while processing your request."
+        else
+          ">" << seqs.first
+        end
+      end
+
+      public
+
+      #
+      # Execute the blastdbcmd(s) and return the matching sequence.
+      #
+      # To make Blast execute as quickly as possible, each selected 
+      # algorithm blasts against all supplied databases at once. 
+      # 
+      # See quorum/lib/search_tools/blast.rb for more information. 
+      #
+      # One consequence of this is not knowing which Blast database to use
+      # when retrieving a hit sequence via blastdbcmd.
+      #
+      # See blastdbcmd -help for more information.
+      #
+      # To work around this issue, simply execute blastdbcmd against all
+      # Blast databases and filter on hit_display_id.
+      #
+      def execute_blast_db_cmd
+        generate_blast_db_cmds
+        @logger.log("NCBI Blast", @cmds.join('; '))
+        
+        @seqs = ""
+        @cmds.each { |c| @seqs << `#{c} 2> /dev/null` }
+        
+        seq = parse_and_send_results
+        $stdout.print seq
+      end
+
+    end
+  end
+end

data/lib/generators/templates/fetch

@@ -0,0 +1,115 @@
+#!/usr/bin/env ruby
+
+$LOAD_PATH.unshift(File.expand_path("../../lib", __FILE__))
+
+require 'trollop'
+require 'fetch_tools/blast_db'
+
+FETCH_TOOLS = {
+  "blastdbcmd" => ["blastdbcmd"]
+}
+
+module Quorum
+  #
+  # Parse Options for Quorum Fetch
+  #
+  class Fetch
+
+    def initialize
+      opts = Trollop::options do
+        text <<-HEAD
+
+Quorum
+
+A flexible bioinformatics search tool.
+
+Options:
+
+        HEAD
+
+        # Fetch tool
+        opt :fetch_tool, "Fetch tool to execute. Available tools: " <<
+        "#{FETCH_TOOLS.keys.join(', ')}", :type => :string,
+          :required => true, :short => "-f"
+
+        # General settings
+        opt :log_directory, "Path to log directory", :type => :string,
+          :required => true, :short => "-l"
+        opt :tmp_directory, "Path to tmp directory", :type => :string,
+          :required => true, :short => "-m"
+        
+        # Global settings
+        opt :fetch_database, "Path to fetch tool database", :type => :string,
+          :short => "-d"
+        opt :fetch_database_names, "Semicolon delimited database names",
+          :type => :string, :short => "-n"
+
+        # Algorithm specific opts
+        opt :blast_hit_id, "Blast hit id", :type => :string, :short => "-b"
+        opt :blast_hit_display_id, "Blast hit display id", :type => :string, 
+          :short => "-s"
+        opt :blast_algo, "Blast algorithm", :type => :string, :short => "-a"
+      end
+
+      @args = {} # Contains valid opts.
+
+      ## Additional opt validation. ##
+
+      unless FETCH_TOOLS.keys.include?(opts[:fetch_tool].downcase)
+        Trollop::die :fetch_tool, "fetch_tool not found\n" <<
+        "Available tools: " + FETCH_TOOLS.keys.join(", ")
+      end
+
+      @args[:fetch_tool] = opts[:fetch_tool].downcase
+
+      unless opts[:fetch_database] && Dir.exists?(opts[:fetch_database])
+        Trollop::die :fetch_database, "fetch tool database not found\n" <<
+        "Supplied directory: " + opts[:fetch_database]
+      end
+
+      @args[:fetch_database]       = opts[:fetch_database]
+      @args[:fetch_database_names] = opts[:fetch_database_names]
+
+      unless Dir.exists?(opts[:log_directory])
+        Trollop::die :log_directory, "log directory not found\n" <<
+        "Supplied directory: " + opts[:log_directory]
+      end
+
+      @args[:log_directory]         = opts[:log_directory]
+      @args[:tmp_directory]         = opts[:tmp_directory]
+      @args[:blast_hit_id]          = opts[:blast_hit_id]
+      @args[:blast_hit_display_id]  = opts[:blast_hit_display_id]
+      @args[:blast_algo]            = opts[:blast_algo]
+
+      ## Check System Dependancies ##
+
+      check_dependencies
+
+      ## Execute fetch tool ##
+
+      if @args[:fetch_tool].include? "blastdbcmd"
+        blast = Quorum::FetchTools::BlastDb.new(@args)
+        blast.execute_blast_db_cmd
+      end
+    end
+
+    #
+    # Check system dependencies.
+    #
+    def check_dependencies
+      FETCH_TOOLS[@args[:fetch_tool]].each do |f|
+        system("which #{f} > /dev/null 2>&1")
+        if $?.exitstatus > 0
+          Trollop::die "Quorum dependency not found for tool " <<
+          "#{@args[:fetch_tool].to_s}. Please add `#{f}` to your PATH."
+        end
+      end
+    end
+
+  end
+end
+
+if __FILE__ == $0
+  Quorum::Fetch.new  
+end
+

data/lib/generators/templates/quorum_initializer.rb

@@ -24,7 +24,7 @@ Quorum.blast_remote      = blast['remote']
 Quorum.blast_ssh_host    = blast['ssh_host']
 Quorum.blast_ssh_user    = blast['ssh_user']
 Quorum.blast_ssh_options = blast['ssh_options']
-Quorum.blast_script      = blast['script']
+Quorum.blast_bin         = blast['bin']
 Quorum.blast_log_dir     = blast['log_dir']
 Quorum.blast_tmp_dir     = blast['tmp_dir']
 Quorum.blast_db          = blast['blast_db']

data/lib/generators/templates/quorum_settings.yml

@@ -22,7 +22,7 @@
 #       password: "secret password"
 #       port: 8888
 #
-#   script: Absolute path to search script.
+#   bin: Absolute path to quorum/bin.
 #
 #   log_dir: Absolute path to log file directory.
 #
@@ -72,7 +72,7 @@ development:
       # Example:
       # password: "secret password"
       # port: 8888
-    script: "%{RAILS_ROOT}/quorum/bin/search"
+    bin: "%{RAILS_ROOT}/quorum/bin"
     log_dir: "%{RAILS_ROOT}/quorum/log"
     tmp_dir: "%{RAILS_ROOT}/quorum/tmp"
     blast_db: "%{RAILS_ROOT}/quorum/blastdb"
@@ -103,7 +103,7 @@ test:
       # Example:
       # password: "secret password"
       # port: 8888
-    script: "%{RAILS_ROOT}/quorum/bin/search"
+    bin: "%{RAILS_ROOT}/quorum/bin"
     log_dir: "%{RAILS_ROOT}/quorum/log"
     tmp_dir: "%{RAILS_ROOT}/quorum/tmp"
     blast_db: "%{RAILS_ROOT}/quorum/blastdb"
@@ -134,7 +134,7 @@ production:
       # Example:
       # password: "secret password"
       # port: 8888
-    script:
+    bin:
     log_dir:
     tmp_dir:
     blast_db:

data/lib/quorum/helpers.rb

@@ -12,6 +12,76 @@ module Quorum
       message = I18n.t("#{kind}", options)
       flash[key] = message if message.present?
     end
- 
+
+    #
+    # Colorize console text.
+    #
+    module Colors
+      ## Thanks to the Rspec team for this code! ##
+
+      #
+      # Main color method.
+      #
+      def color(text, color_code)
+        "#{color_code}#{text}\e[0m"
+      end
+
+      #
+      # Bold
+      #
+      def bold(text)
+        color(text, "\e[1m")
+      end
+
+      #
+      # White
+      #
+      def white(text)
+        color(text, "\e[37m")
+      end
+
+      #
+      # Green
+      #
+      def green(text)
+        color(text, "\e[32m")
+      end
+
+      #
+      # Red
+      #
+      def red(text)
+        color(text, "\e[31m")
+      end
+
+      #
+      # Magenta
+      #
+      def magenta(text)
+        color(text, "\e[35m")
+      end
+
+      #
+      # Yellow
+      #
+      def yellow(text)
+        color(text, "\e[33m")
+      end
+
+      #
+      # Blue
+      #
+      def blue(text)
+        color(text, "\e[34m")
+      end
+
+      #
+      # Grey
+      #
+      def grey(text)
+        color(text, "\e[90m")
+      end
+    end
+
   end
 end

data/lib/quorum/version.rb

@@ -1,3 +1,3 @@
 module Quorum
-  VERSION = "0.1.0"
+  VERSION = "0.2.0"
 end

data/lib/quorum.rb

@@ -1,10 +1,11 @@
 require "quorum/engine"
 require "quorum/helpers"
 require "quorum/sequence"
-require "workers/quorum"
 require "resque"
 require "resque/server"
+require "resque-result"
 require "net/ssh"
+require "workers/quorum"
 
 module Quorum
 
@@ -12,9 +13,12 @@ module Quorum
   BLAST_ALGORITHMS = ["blastn", "blastx", "blastp", "tblastn"]
 
   mattr_accessor :blast_remote, :blast_ssh_host, :blast_ssh_user, 
-    :blast_ssh_options, :blast_script, :blast_log_dir, :blast_tmp_dir,
+    :blast_ssh_options, :blast_bin, :blast_log_dir, :blast_tmp_dir,
     :blast_db, :tblastn, :blastp, :blastn, :blastx, :blast_threads
 
+  ## Deprecated ##
+  mattr_accessor :blast_script
+
   class << self
 
     ## Blast ##
@@ -39,9 +43,9 @@ module Quorum
       @@blast_ssh_options || {}
     end
 
-    # Blast script path.
-    def blast_script
-      @@blast_script || nil
+    # Blast bin path.
+    def blast_bin
+      @@blast_bin || nil
     end
 
     # Blast log dir path.
@@ -84,6 +88,12 @@ module Quorum
       @@blast_threads || 1
     end
 
+    ## Blast Deprecated ##
+
+    def blast_script
+      nil
+    end
+
   end
 
 end

data/lib/workers/quorum.rb

@@ -1,11 +1,13 @@
 module Workers 
   class System
+    extend Resque::Plugins::Result
+
     @queue = :system_queue
 
     #
     # Resque worker method.
     #
-    def self.perform(cmd, remote, ssh_host, ssh_user, ssh_options = {})
+    def self.perform(meta_id, cmd, remote, ssh_host, ssh_user, ssh_options = {}, stdout = false)
       unless ssh_options.empty?
         # Convert each key in ssh_options to a symbol.
         ssh_options = ssh_options.inject({}) do |memo, (k, v)|
@@ -15,6 +17,7 @@ module Workers
       end
 
       exit_status = 1
+      out         = ""
 
       if remote
         # Execute command on remote machine.
@@ -24,6 +27,12 @@ module Workers
               unless success 
                 Rails.logger.warn "Channel Net::SSH exec() failed. :'("
               else
+                # Capture STDOUT from ch.exec()
+                if stdout
+                  ch.on_data do |ch, data|
+                    out = data
+                  end
+                end
                 # Read the exit status of the remote process.
                 ch.on_request("exit-status") do |ch, data|
                   exit_status = data.read_long
@@ -34,12 +43,13 @@ module Workers
           ssh.loop
         end
       else
-        system(cmd)
+        out         = `#{cmd}`
         exit_status = $?.exitstatus
       end
       if exit_status > 0
         raise "Worker failed :'(. See quorum/log/quorum.log for more information."
       end
+      out if stdout
     end
   end
 end

data/quorum.gemspec

@@ -19,11 +19,13 @@ Gem::Specification.new do |s|
   s.add_dependency "jquery-rails"
   s.add_dependency "net-ssh", "~> 2.2.1"
   s.add_dependency "resque", "~> 1.19.0"
+  s.add_dependency "resque-result", "~> 1.0.1"
   s.add_dependency "bio-blastxmlparser", "~> 1.0.1"
 
   s.add_development_dependency "mysql2"
   s.add_development_dependency "rspec-rails", "~> 2.6"
-  s.add_development_dependency "capybara"
-  s.add_development_dependency "database_cleaner"
+  s.add_development_dependency "resque_spec", "~> 0.8.1"
+  s.add_development_dependency "capybara", "~> 1.1.1"
+  s.add_development_dependency "database_cleaner", "~> 0.6.7"
   s.add_development_dependency "factory_girl_rails", "~> 1.2.0"
 end

data/spec/data/seqs_not_fa.txt

@@ -1,16 +1,16 @@
-TGATAGGATAATTCTAGACAAAACATTAGCCGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTTAGTGATACAGTGGTGACTGATCATGCTTGTTCTGGGGAAACATGCTCGTACTACGCAATTGGAGATGTATTTATTTGTGAAAAGACTGGACAAGTTCATGTTTGTGACGAAACATGTAGGGAAGTAGTAATGGATCCCACCAACGAGCTTTTGGTCTGTACAATATCTGGCCACTGTTTTGACAGATTGCTATCACCTGCTGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGCGGCAGATGAGGCAGAACCGTTTATGGGATCTGGCCGTTTTGCACGGGCTTATTTGCTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTGATCCCTATTGGCCCTTCTGGAGTGGATGATCTCATGTCTCAGCATTTACCTATTTAAGATCAAATAAATCGGGTTTCCTTTTCGTGTTTCTCTTGGCATAAGAATGTTTGATTAGATCTAGATTATGAAACTCTAATCGTCTTCTATATTAATAATTGTATGCTTAAATTTATAGTTGAAATTCCATTGATGAATTTTTCTT
-CAGAAGACATGTCTTTGACAAAGGTATACCATCTTTTCCNCCAACTTGGTTTGAGACATTTATTTGTTGTACCTCGTCCATCGCGTGTGCTTGGTTTGATAACCAGAAAAGATTTGTTGATTGAGGACACAGATGCGAATACATTAGAGCTTCAGGCAACTAGTAGTTCGGCATCCAGGTAAAAGATTGATGGCAAGGAATGCAGATGTGGAGAGCCCTCTGCTAAATGGTCTTCTGGTTCAGAATCAGATACCTGACTAATACCGTCTGCAGCCTTCCCGAATTCCTTTTTGCGTCCCATTTTCACTTGAAAATCATTCTTTATTATTTTTGTATTAATGTTGAAATAGGTTAGAGAACCCGATATTTTGGGGATGGAACGGGGTTGTAGACTGACAGTATACCCTAGAATTTTGTATATAAAGTATAAACTACAGCAAGCACAGAAAAAAATCATGAAAGCGCCCTTGTGATAATTATGATAGCAGAATTTAGACTGAT
-CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCGTCGTTTTGGGTTCTGCGGATCGGTGGATTCTGGTCGCGAATTCCGACGCTGTTCGTGGCGGCGAACCGAATTCCGGTCAACAAGCGAAGAAGATGAAGGTTTTCGTCAAGACTCTGAAGGGCTCTCACTTCGAAATCGAAGTCAAGCCCCAAGACACGGTTTCGGATGTGAAGAAAAATATTGAAACTGTTCAAGGTGGATGTCTATCCTGCCGCGCAGCAAATGCTTATTCATCAAGGGAAAGTTCTTAAGGATGGTACTACCTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATTGTGATTATGATTTCCAAGAGTAAGACTCCGTCTGGTGAAGGATCTACTACTTCAGCTGCACCTTCAGCTAAGGCTCCAGCTCCTGCTCCTATATCTTCGGGCACGGCTGTGGAAGGTTCTGATGTCTATGGACAAGCAGCATCCAATCTGGTTGCTGGTAGCAACTTGGAAGACACAATTCAGCAAATTCTTGATGTTGGAGGAGGGACCTGGGATAGGGATACTGTAGTCCGGGCTCTTCGAGCTGCCTTCAACAACCCTGAGAGAGCTATTGAATATTTATATTCAGGAATCCCCGAGCAAGCTGAAGCTCCACCTGTGGGCCGTGTGCCTGCAAGTGCACAACCTGCAAATCCTCCAGCAGCTGCAGCTCCGCAAGCGGCACAACCTGCTCCTGTTACCTCAAGTGGGCCTAATGCTAATCCTTTAGACCTTTTTCCACAGGGCCTCCCAAATGTTGGTTCTGGTGGTGCTGGTGCTGGTGCTGGCTCTTTAGATTTTCTTCGCAACAGCCAACAATTCCAAGCCTTGCGAGCTATGGTGCAGGCTAATCCACAAATATTGCAGCCTATGCTACAAGAGCTTGGCAAACAGAATCCTCATCTAATGAGATTGATTCGAGATCATCAAGCTGACTTCCTTCGCTTGATAAATGAGCCTGTGGAAGGTGGCGAAGGGAACCCATTGGGGCAGCTGGCTGGTGGCATACCACAAGCAATAACTGTCACCCCTGAGGAGCGCCAAGCAATTGAACGTCTTGAAGCAATGGGTTTCGATCGTGCGATTGTATTGGAGGTGTTCTTCGCTTGCAACAAAAATGAGGAATTGGCTGCCAACTACCTTTTAGATCACATGCATGAGTTCGACGAACAATAAATCTCTTCATGTTGCTAAATTATTTATCTGTTATCTTTTTAATGTTTATGGGGCCTTTGTTTTACTAGACGGTTTGATGAGGTAATACTTGAAAATGAAAAAAATCTCAAGTGGAGAAGGAACGTTTTTACCACCTCCACATTATTGCCTTTGTGGACAGTCTCAGTATTCATATACATAGTCGTTTGTCCTGTACTATTGGTATTGTGCATCCTTTTAACATGTGTAATTGTTTAGCTGCGCATCCTATTCTATATTTTCT
-CGTTCGCATTGTTCACTCACCATACGCACTTCCATTTTCATCTCCCACCGTCGCATTTTCTTCGGATCTGAAATTCCTCACCATGAATCGCCACCACGATCCCAATCCATTCGACGAAGACGAAGTCAATCCCTTCTCGAACGGTGCTGCTCCTGGATCTAAATCACGTATTCCACCATTGGCATCCGAACCACTGGGCTTTGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACCACAAATGAGCCTAAAAAAAAAGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAAGGATTTAAAAAGAAGAGAGGATGCTGTTTCTAGAGCTGGTGTGCCTGTTGATGATAAGAATTGGCCTCCGATTTTCCCAATTATTCACCATGATATTGCCAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTTGTTTTTAATGTAGTTGCTGTGATGGTCTGTTGGATCAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATCTATGCTCTACTTGGTGTTCCCCTTTCATATGTGCTTTGGTACAGGCCCCTTTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGCTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATCTTTGCTGCAATTGCACCTCCAGTTGTTTTTCATGGGAAATCATTAACGGGCATCCTTGCAGCAACTGACGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCCTGTTTTGCTTGGAGTCTCTTCTAAGCTTGTGGGTAATTCAGAAAATATACCTGTTTTTCCGGGGGCATAAGTGAGGCTACTCAGGATTTTGATCCATCGGCTTTTATGATATCAGTCACTTCCCGGCGTGGCTTAGTATATTCTTTCTTTTTGTCTATCCTCTTTTTTCGCTTGCAATATTTTCGTGTGATATTGTTTGTTGTTGTAGTCTAGTTCTTGTTACAGAGCTTAGTGTGTAATTTCCTGTGTAATGAATTCTGTGAAGTTTAGTAATTTTCTAGTGTAACAATAACCAAGCTTTGCTTTCGATAAGCATATATGTAGTGGATTTCCATAAGGAATTATTGTAGTGCTATTGTAGTTGTGAATAGTGACACCCCTCGGAGGTTTTCTATTTGTAAGACAGCACTGATGCAAACACTTTAGTTAAAATTCATGTAGGATCTATTCAATT
-CAGGATACACCTCCAGATGGGGAAAATATGACAGGAGCCTCCAAAGAGATGAATGTAGAATCTATTCCTTCCTTCTTTCAAGATATTATTGAGCGTATGGTTTCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTCTATAATGAGGGCGATCACTCACATCCCTACAATTGGCCACATTGGTATGGAAGGCCTGTCTATATCCTTTCCCTGACAGAATGTGATATGACTTTAGGAAGAGTAATTTCCTCAGACCATCCAGGGGATTACAGGGGCTCTCTGAAGCTTTCTCTTCTCCCTGGGTCTCTTCTGTCAAGGCAAGGGAAATCTACTAATTTTGCTAGATATGCTATTCCTTCTATCCGCAAACAACGCATACTTGTTATTTTTACAAAGTCCCAACCAAAGAAGTCACTGTCAAGTGATGCTCAACGTTTTACCTCATCAGCAGCATCTTCTCATTGGGGTCCACCGCCAAGCCGTTCCCCCAATCACGTTCGTCATCATTTAGGCCACAAGCATTATGCTTCAGCTCCAACAAACGGAGGACTGCCAGCTCCACCAATCCGGCCACA
-AAGGACTAGTTGATTTGCTACATGTGTTCTGTGTTGTTCTTGCTTTGGTAAATGTGTCTCTAGTGAAAGCAGAAGATCCATACAAGTTCTACACATGGACAGTGACTTATGGAACTCTTTCTCCTCTGGGCAGTCCTCAACAAGTTATTCTGATCAATGGTCAGTTTCCTGGTCCAAGACTTGACTTGGTAACTAATGACAACGTGATTCTCAACCTCATCAACAAGCTGGATGAGCCATTCTTGCTCACATGGAATGGCATTAAGCAGAGGAAAAATTCTTGGCAAGATGGGGTTTTAGGAACTAACTGTCCCATTCCTCCAAACTCAAATTACACTTACAAGTTTCAGGCCAAGGATCAGATTGGCACTTATACATACTTTCCATCAACTAAGATGCATAAAGCTTCTGGAGGGTTTGGAGCTCTCAATGTTCTTCATAGATCTGTCATCCCAATCCCTTATCCAAACCCTGATGGAGATTTTACATTACTCATTGGTGATTGGTACAAAACTAGCCACAAGACATTAAGCCAAACATTGGATTCTGGGAAATCTCTTGCCTTTCCTGATGGCCTCCTTATCAATGGCCAGGCTCATTCTACCTTCACTGTTAACCAGGGAAAAACCTATATGTTCAGGATCTCAAATGTTGGTCTGTCAACCTCAATTAACTTCAGAATTCAGGGACATACCCTAAAACTAGTTGAGGTTGAAGGATCACACACTATCCAGAACGAATACGACTCGCTTGATGTGCATGTTGGCCAATCAGTTTCTGTGTTAGTAACCTTAAATCAACCTCCAAAGGACTATTACATCGTTGCCTCAACAAGATTTACCAAGACTGTTCTCACTACAACCTCAGTGCTACACTAAAATTCTCAGTCAGCCGCATCAGGATCCTTGCCTGCTCCCCCTGCTGACAAT
-ATTGAAATACGTCTTGCAAAAGCTGAAGCTATTAATTGGACATCTCTCGAATATAGCAAGGATATGCCTCCCCAAAAAATTAAAGTGCCTACAATTCAATCTGAAAGGCCTGCATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTATGGTGAAAAAAGAGGAGAAAGAAGAAAAGCTGGATGGTGATGCTGCTTTGAATAAATTGTTCCGTGATATTTATCAAAATGCTGATGAGGACATGCGGAGAGCAATGAGCAAGTCATTTCTGGAGTCAAATGGAACAGTGCTGTCAACGGATTGGAAAGAAGTGGGATCCAAGAAGGTGGAAGGAAGTCCTCCAGAAGGTATGGAATTGAAGAAATGGGAGTACTAATTCAGTACAAGCTGATGCTCATGAGAGTTCAAATTCACAAAAATAAATTCTGAGAAGGGAAACAAATTCTGTAATCTTAATGGTATCGGTTATTTTG
-TGAGATCATGCGCGAAATGATGAGGAATACAGACAGAGCCATGAGCAACATTGAGTCTTCTCCTGAGGGATTCAACATGCTGAGGCGCATGTATGAAAATGTTCAAGAACCATTTTTAAATGCCACTACAATGGCTGGTAATACAGGAAATGATGGTGTCAGGAATCAATCAACTAATCCCTCAACGACTAATTCTGAAGCAACTTCCCCTGTTCCAAATACTAACCCACTTCCTAATCCTTGGTCCTCCACTGGAACTGGAGGTGCACAAGGCAACACCAGAAGGACAACTGCTGGTGGGGATGCTCGGCAGCAGGCACTCACTGGACTAGGAGGACTTGGTGTGCCAGATCTTGAAGGCATGATGGGTGGTATGCCAGATCCTGCTATGTTGACCCAATTAATGCAAAATCCAGCTATTTCACAAATGATGCAGAGTATCCTTTCCAATCCACAGACTATGAATCAGATTCTTGGTCTCAATACTGAGCAGCGTGGCATGCCTGATCTAAACTCACTAAGAAGATGTGATGCAAAACCCAGAGTTTCTTCGCTTATTTTCCTCACCTGAGACACTGCAGCAACTCATGTCTTTCCAGCAATCTCTTATGTCTCAAGTTGG
-CAGCTCTATTCTCCACCAACACAAAAACGCTCACAAACTAGCTTCTTTGGAGAAAACATTAGAGACAATAGTGGCGGTGGTGGGAACAATGGCAGCCTCACTACAAGCAGCAGCTACTTTCATGCAACCAACCAAGTTTGGTCGCACCAACACTTTGCAGCTGAAATCTACTCAATCCATTTCTAAGGCTTTTGGGTTGGAGCCCTCTGCAGCTAAGGTCTCATGTTCCCTTCAGGCTGATTTCAAGGAGTTGGCTCACAAGTGTGTTGAAGCTACCAAGATTGCTGGGTTTGCTCTTGCCACCTCTGCTCTAGTTGTCTCTGGAGCAAGTGCGGAAGGTGCTCCGAAGAGGCTAACCTTCGATGAAATCCAGAGCAAGACATACATGGAAGTGAAGGGAACCGGAACCGCAAACCAGTGCCCCACCATTGAAGGGGGAGTGGAATCATTTTCCTTCAAGGCCGGGAAGTACAATGCCAAGAAGTTCTGCCTTGAACCCACTTCATTCACAGTGAAGGCAGAGGGAGTAGCCAAGAACGCCCCACTTGAGTTCCAAAACACCAAGCTCATGACACGTCTGACCTACACCCTCGACGAGATCGAAGGACCCTTTGAGGTTTCCTCTGATGGCACTGTCAAGTTCGAGGAGAAAGATGGCATTGACTACGCTGCTGTCACAGTTCAGCTTCCCGGTGGCGAGCGTGTTCCATTCCTTTTCACCATCAAACAGTTGGTAGCATCTGGGAAGCCAGACAGCTTCAGTGGGGAGTTTCTAGTGCCTTCATACCGTGGATCTTCCTTCTTGGACCCCAAGGGAAGAGGTGCGTCAACTGGTTATGACAATGCTGTCGCATTGCCTGCTGGTGGCAGAGGAGATGAGGAAGAACTTGCTAAGGAGAACAACCAGAGTGCTTCTTCATCCCAAGGGAAGATCACCTTGAGCGTGACACAGAGCAAGCCTGATACCGGTGAGGTGATTGGTGTGTTCGAGAGCATTCAGCCGTCCGACACTGATTTGGGAGCGAAAGCTCCCAAGGATGTGAAGATCCAGGGAGTTTGGTATGCTCAGCTCGAGTCATAGACAGCTTTATCTCTCTTCTGCTTTATTTTGTATTTTGTTGTAACTTCTCAGTGTTGCTGCCATTACCTTTGACACCACTGTCCCAGCATGAGAGTGTTATCCTTGTTTGTATGTATACTATCGACTTTCAATTATAATGCTCGAAAATGTCCAAGGTTT
-AGCAGTGTTCCCATGAAACCTTCCCACTGAGTCAACTCACTCTGTACATAAAACCCTCTTCATCATCATCATGGCTTCTCAAGTTTTTCTTCAGCAAGGGTTGTTACTGTTTGCCCCAAACCAATGTTCTCCAACCAAGCTCGGTGTATCTTCTTGCCTCGGTTCTCGTAACTTTCCGTTGATTTCCTCCACCTCAATTTCATGGCGTTGCAACAACCCTCTCTCTGCCAAACCCTCTTTTGTTGTCAGAGCTGACTCCAATGTCGACGCTGCTTCCGACAATGCTGGTGAAGTTCCAGAAGCTGAAGGTAGCGTTGATCAGGTTCCTGAAGATGGAGAAGCAGAACTAGCTTCGGATTCTGAGGTGGAGCAACCCAAGCCCCCTAGAAAGCAACGAGTCAAGCTTGGAGATGTTATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAAAGCATGAGGCCGACTCCAGAAATTAGGACTGGAGATGTTGTGGAAATCAAACTGGAAGTTCCTGAGAACAAGCGTAGGTTGTCTATTTATAAAGGTATAGTCATCTCAAGACAAAATGCTGGTATTCACACAACTATTCGAATCCGAAGGATTATTGCTGGCACAGGGGTTGAGATTGTCTTCCCAATTTACTCACCAAACATCAAAGAAATCAAAGTGGTAAACCACCGTAAAGTCAGAAGAGCAAGATTGTACTATTTAAGAGACAAGCTTCCCAGATTCTCCACTTTCAAATGATACGGTTACCACTTCTCATCCTGATCTTCTTCAAAGTAGTTGCTGATATTGCAGGGCCATATTTTGGTTATTTCGTTTTGTTGTGTTGTAGAATATATCATTTTTCTTCCTCTAAATCTATCCTCCGAGAATTGGAAACAAGTGTATGTATGTTGCCCTTGATAATATTTGAAATTTGAAGTGTTCTCCCTTGCATTCCTTGGTATAGGATAGAAAGCCAAGCTCCTAAACAAACATTACTAAATATGACAGTCTAAGGAATGAGCATGTGTATCGATACCAGTTAAGTGCATTGTGAATGTATTTTTTTTTTTTATCTCTATCCATAAAAAAAGGTATGTTCATTCTTG
-AAGAAACAAGAGAGAGAAGATGATTTAGATGAGCCAAAAACAAAGGAAAAACGGCAAAAGGGAGAGAAAGGAAAATCTCCATCAGGTTTTCTTGCTCCTCTCCAGCTATCTGATGCCCTTGTAAACTTCCTTGGTACTGGAGAAAGTGAATTATCAAGATCTGATGTCATAAAAAGAATGTGGGAATACATAAAAGGAAACGACCTTCAGGATCCTTCTGACAAGAGGAAAATATTATGCGACGACAAGCTGAAAGAACTCTTTGATGTGGACTCCTTTAACGGCTTCACCGTTACAAAACTGTTGACTCCTCATTTTATAAAGGCAGAGCAGTGAGTTGCTTGTGGAAATCGGTAATGTTGTCCAATTAGGTTTGGAAGGTCCTTCTTTTGTGGCCTTTTGGCATTGTCTGCCAACACGAGGAATAGGAATTAGGAACATGACAGATTTTCAGTAAATTTTTCTCCAAGAATTTAATGTTACGTGACCATTACTTTGTTTTTTTTAATATCACGTTTTGTCACTTGGCAGTTGAAATTTTTGTATATTTTCAGTTCCTGAAGCTGCAAGGATAATGCTGACTTCTTACTCTACTCTGCATTTGCTCATATGAGGCACTACACATATCCATAATACATGAATAAATTTGCAGTATTGAA
-CATTTGTTCCATTTGCTCAGGCATTTGCAGCTGTACTTACAGCTGTCCTTACTGGTTCTCTCTATTATGTGGCTGCCTCTCCTAAAGATCCTACTTATATTGTGGCACCTGTTTTACAGTCTCGCTCTGGTCGTCAAGATTTGAAAAAGCTATTTGAAGCCTGGTATGAGAAACGGCAAATGAAAAAAATATATTCACCACTTCTGGAAGGACTACTAGCTCTCTACCTAGGATTTGAGTGGATCCAAACGAATAACATTCTTGCTCCCATTATCACACATGGCATATACTCCACAGTTATATTGGGACATGGCCTTTGGAAGATAAACGACCACCGGCGAAGACTACGTCAAAGAATCCAACAGCTCAAATCTGAAGAACAAAATTCCCAGTAGACTTTGAAATACCTTCCATGTCTGGCTGTGATACAAAAAATGTATATGTATGTATTAGAGCTGCTAATTATGTAAAGAGAAAAGATGTATATACTTGTGTTAGCTGAGGTCTCGTACACACTGAATATTCAGGTTTTGTTCACCATTTTCTAATTTCGAGTTACTATATGTAGTGTTTTCTAATAAAATGAAATAAAATCCCCAAGTTGGGTTGATTTAAATT
-GAGACCTGTTATGATTCACAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATTCTTTTAGAGCACTACAAGGGTAAATGGCCCTTGTGGCTCAGTCCTCGTCAAGCAATTGTATGTCCTGTGTCAGAGAAATCACAAGCTTATGCACTGCAGGTGCGAGATCAGATCCACCAAGCAGGATATCACGTTGATGCTGATACAACTGATCGGAAGATTCAGAAGAAGGTACGGGAAGCTCAATTAGCGCAGTACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATACAGGACAGGTGAGTGTACGGGTTAGAGATAAAGCAGACCATAGCGTTATGAGTATTGAGAATCTACTCAAACACTTCAGCGACGAAGTTGCAGCTTTTCATTGATACTTCTCTTGTGAAAACTGTTGGAAGCAAATTTTACCCCCACTCACCTAGTTTGTTCACACTTTGTGTGCATTATTTATATTTTCAGCCTGACAATTTACATTTAGATGATTTGGGTAATGACTGTATTTTCTATGTGAATTTTGGAGCGCACTGATATCGATCCATTGTTTGAAAAGCTGAGAGAAAGTGTAATCTTTTATTTTCTGTCTACATTTTAATTATGTTTTTCGTTAGTTTTTTCCTTTTATATATTTGTTTGTTAAATTGAAGGAAACTATTGTTGG
-GGCACCAGGGATCTTACAAGGCTGGATCTCCATAATAACAAGTTGACAGGGCCTATTCCTCCTCAAATTGGACGGTTGAAGCGTCTTAAAATACTCAATTTGAGGTGGAACAAACTACAGGATGCAATTCCTCCAGAAATTGGCGAGCTTAAAAGTTTAACACATCTGTACCTAAGCTTCAATAGTTTCAAGGGAGAAATTCCCAAAGAGCTAGCAAATCTTCCAGACCTTCGCTACCTTTATCTTCATGAAAACCGTTTAATTGGTAGGATACCACCTGAGTTGGGCACTCTACAAAACCTTCGGCACTTGGATGCTGGTAACAATCATTTGGTGGGTACCATAAGGGAACTCATTCGTATTGAAGGTTGCTTTCCAGCACTCCGCAATCTATATCTAAACAATAATTATTTTACTGGAGGAATGCCTGCACAACTTGCCAACTTATCCAGTCTTGAGATCTTGTACCTGTCCTACAATAAAATGTCAGGAGTTATACCATCTAGCCTTGCTCATATTCCTAAATTGACATACTTGTACTTGGATCACAATCAGTTTTCGGGGAGAATTCCCGAACCCTTTTACAAACATTCATTTTTGAAAGAAATGTACATCGAGGGAAATGCATTCCGGCCTGGTGTTAAACCCATTGGTTTCCATAAAGTGCTTGAAGTTTCTGATTCAGACTTCCTTGTTTAATGAAACTCAACATATTTAGTTTTTTAGGAAGTTTACGTGTATAATTAATGAAACAATAGCTCCTCTGATTTTCTCAATGAAAATTGCTATATGGGTAATTCAATTTTTGTCACGGCTGTCTTGTCAGAAGAATCAATAAATAATAGTGTTTTTTAACTCT
-GGAAATGAGCACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACTATTATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTATCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCAGCCGAGCAGTCACTCAAGGGATATGAGGCTGCTTCAGCCACTGCCAACACCGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGCGAGGAGAACATAAAAGCTGAAGAAGCCAAACCTACTGAGCCTGAGAATTAACTAGGTTCTTTTGGATCTTTGGCCCTGATTCAATAGTCAGATTTTTGTGGTGCTCTGCAAAGAGGGCATTTTTCAGCTTTTCTTGCAATGGATTTGGAATGGACAATATGAGCTGTCGCCACTTCATAATTACCAACCAAAGCCAAAAGATCTGAGCCTGCCTTTTCTTTATTTCTTTAAATTGTTTTTCTTTCTTACTGCCTTTATCTATTTTAAGCAAAGTGGTCGGTTGAAACAATGGATAATTCACATTTAAATCATAAGAATCTTTTTCAAGTGTTCATTACATCCGTTTTGGTTCGTTTAAAATATTGTTTCCTATGCGCTCCTAGATGGGATACAGTACAAGTATTCAACTGTTGAGCAGAGATTTTTACCTCAAAAAATTAGT
-AGACACAACATCATAGAAACAGATCAACAACACATTAAAATTAGCATGGATCATAGCTTACGTTGTTTTGGGTCGACACTACCCAAAACTCTTCTTCAGTTTCTGTTATCACCTTCACTCCTTCTCTTCATCTCCTTCTTCAGTTTCTCCAACGCAGCCTTCGACCTCGCCACCATACCCTTCAACGATGCCTATTCACCCCTCTTTGGGGATGGCAACCTTGTCCGCTCCGCCGATGGCAACGGTGTTCAACTCCTCCTCGATCGCTTCACCGGTTCTGGTTTCGTTTCTTCCAATATGTACCAGCATGGATTCTTCAGCGCCAATATCAAGCTACCATCGAATTACAGCGCTGGTATTTGCGTGGCCTTTTATACATCAAACAATGAGATGTTTGAGAAGACACACGATGAGTTAGACTTTGAATTCTTAGGTAATATAGCCGGAAAGCCTTGGAGGTTTCAGACAAACTTGTACGGCAATGGCAGCACCAACCGTGGCCGTGAGGAGCGGTACCGCCTCTGGTTTGATCCAACCAAGGGATTCCATAGATACAGCATTCTATGGACAGCTAAGAACATCATATTTTACATAGATGAGGTTCCAATTAGAGAAATTATAAGAAGTGAAGAAATGGGAGCTGATTACCCAGCAAAGCCAATGGCATTATACGCCACAATATGGGATGCATCAAATTGGGCCACATCGGGTGGAAA
+TGATAGGATAATTCTAGACAAAACATTAGCCGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTTAGTGATACAGTGGTGACTGATCATGCTTGTTCTGGGGAAACATGCTCGTACTACGCAATTGGAGATGTATTTATTTGTGAAAAGACTGGACAAGTTCATGTTTGTGACGAAACATGTAGGGAAGTAGTAATGGATCCCACCAACGAGCTTTTGGTCTGTACAATATCTGGCCACTGTTTTGACAGATTGCTATCACCTGCTGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGCGGCAGATGAGGCAGAACCGTTTATGGGATCTGGCCGTTTTGCACGGGCTTATTTGCTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTGATCCCTATTGGCCCTTCTGGAGTGGATGATCTCATGTCTCAGCATTTACCTATTTAAGATCAAATAAATCGGGTTTCCTTTTCGTGTTTCTCTTGGCATAAGAATGTTTGATTAGATCTAGATTATGAAACTCTAATCGTCTTCTATATTAATAATTGTATGCTTAAATTTATAGTTGAAATTCCATTGATGAATTTTTCTT
+CAGAAGACATGTCTTTGACAAAGGTATACCATCTTTTCCNCCAACTTGGTTTGAGACATTTATTTGTTGTACCTCGTCCATCGCGTGTGCTTGGTTTGATAACCAGAAAAGATTTGTTGATTGAGGACACAGATGCGAATACATTAGAGCTTCAGGCAACTAGTAGTTCGGCATCCAGGTAAAAGATTGATGGCAAGGAATGCAGATGTGGAGAGCCCTCTGCTAAATGGTCTTCTGGTTCAGAATCAGATACCTGACTAATACCGTCTGCAGCCTTCCCGAATTCCTTTTTGCGTCCCATTTTCACTTGAAAATCATTCTTTATTATTTTTGTATTAATGTTGAAATAGGTTAGAGAACCCGATATTTTGGGGATGGAACGGGGTTGTAGACTGACAGTATACCCTAGAATTTTGTATATAAAGTATAAACTACAGCAAGCACAGAAAAAAATCATGAAAGCGCCCTTGTGATAATTATGATAGCAGAATTTAGACTGAT
+CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCGTCGTTTTGGGTTCTGCGGATCGGTGGATTCTGGTCGCGAATTCCGACGCTGTTCGTGGCGGCGAACCGAATTCCGGTCAACAAGCGAAGAAGATGAAGGTTTTCGTCAAGACTCTGAAGGGCTCTCACTTCGAAATCGAAGTCAAGCCCCAAGACACGGTTTCGGATGTGAAGAAAAATATTGAAACTGTTCAAGGTGGATGTCTATCCTGCCGCGCAGCAAATGCTTATTCATCAAGGGAAAGTTCTTAAGGATGGTACTACCTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATTGTGATTATGATTTCCAAGAGTAAGACTCCGTCTGGTGAAGGATCTACTACTTCAGCTGCACCTTCAGCTAAGGCTCCAGCTCCTGCTCCTATATCTTCGGGCACGGCTGTGGAAGGTTCTGATGTCTATGGACAAGCAGCATCCAATCTGGTTGCTGGTAGCAACTTGGAAGACACAATTCAGCAAATTCTTGATGTTGGAGGAGGGACCTGGGATAGGGATACTGTAGTCCGGGCTCTTCGAGCTGCCTTCAACAACCCTGAGAGAGCTATTGAATATTTATATTCAGGAATCCCCGAGCAAGCTGAAGCTCCACCTGTGGGCCGTGTGCCTGCAAGTGCACAACCTGCAAATCCTCCAGCAGCTGCAGCTCCGCAAGCGGCACAACCTGCTCCTGTTACCTCAAGTGGGCCTAATGCTAATCCTTTAGACCTTTTTCCACAGGGCCTCCCAAATGTTGGTTCTGGTGGTGCTGGTGCTGGTGCTGGCTCTTTAGATTTTCTTCGCAACAGCCAACAATTCCAAGCCTTGCGAGCTATGGTGCAGGCTAATCCACAAATATTGCAGCCTATGCTACAAGAGCTTGGCAAACAGAATCCTCATCTAATGAGATTGATTCGAGATCATCAAGCTGACTTCCTTCGCTTGATAAATGAGCCTGTGGAAGGTGGCGAAGGGAACCCATTGGGGCAGCTGGCTGGTGGCATACCACAAGCAATAACTGTCACCCCTGAGGAGCGCCAAGCAATTGAACGTCTTGAAGCAATGGGTTTCGATCGTGCGATTGTATTGGAGGTGTTCTTCGCTTGCAACAAAAATGAGGAATTGGCTGCCAACTACCTTTTAGATCACATGCATGAGTTCGACGAACAATAAATCTCTTCATGTTGCTAAATTATTTATCTGTTATCTTTTTAATGTTTATGGGGCCTTTGTTTTACTAGACGGTTTGATGAGGTAATACTTGAAAATGAAAAAAATCTCAAGTGGAGAAGGAACGTTTTTACCACCTCCACATTATTGCCTTTGTGGACAGTCTCAGTATTCATATACATAGTCGTTTGTCCTGTACTATTGGTATTGTGCATCCTTTTAACATGTGTAATTGTTTAGCTGCGCATCCTATTCTATATTTTCT
+CGTTCGCATTGTTCACTCACCATACGCACTTCCATTTTCATCTCCCACCGTCGCATTTTCTTCGGATCTGAAATTCCTCACCATGAATCGCCACCACGATCCCAATCCATTCGACGAAGACGAAGTCAATCCCTTCTCGAACGGTGCTGCTCCTGGATCTAAATCACGTATTCCACCATTGGCATCCGAACCACTGGGCTTTGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACCACAAATGAGCCTAAAAAAAAAGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAAGGATTTAAAAAGAAGAGAGGATGCTGTTTCTAGAGCTGGTGTGCCTGTTGATGATAAGAATTGGCCTCCGATTTTCCCAATTATTCACCATGATATTGCCAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTTGTTTTTAATGTAGTTGCTGTGATGGTCTGTTGGATCAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATCTATGCTCTACTTGGTGTTCCCCTTTCATATGTGCTTTGGTACAGGCCCCTTTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGCTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATCTTTGCTGCAATTGCACCTCCAGTTGTTTTTCATGGGAAATCATTAACGGGCATCCTTGCAGCAACTGACGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCCTGTTTTGCTTGGAGTCTCTTCTAAGCTTGTGGGTAATTCAGAAAATATACCTGTTTTTCCGGGGGCATAAGTGAGGCTACTCAGGATTTTGATCCATCGGCTTTTATGATATCAGTCACTTCCCGGCGTGGCTTAGTATATTCTTTCTTTTTGTCTATCCTCTTTTTTCGCTTGCAATATTTTCGTGTGATATTGTTTGTTGTTGTAGTCTAGTTCTTGTTACAGAGCTTAGTGTGTAATTTCCTGTGTAATGAATTCTGTGAAGTTTAGTAATTTTCTAGTGTAACAATAACCAAGCTTTGCTTTCGATAAGCATATATGTAGTGGATTTCCATAAGGAATTATTGTAGTGCTATTGTAGTTGTGAATAGTGACACCCCTCGGAGGTTTTCTATTTGTAAGACAGCACTGATGCAAACACTTTAGTTAAAATTCATGTAGGATCTATTCAATT
+CAGGATACACCTCCAGATGGGGAAAATATGACAGGAGCCTCCAAAGAGATGAATGTAGAATCTATTCCTTCCTTCTTTCAAGATATTATTGAGCGTATGGTTTCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTCTATAATGAGGGCGATCACTCACATCCCTACAATTGGCCACATTGGTATGGAAGGCCTGTCTATATCCTTTCCCTGACAGAATGTGATATGACTTTAGGAAGAGTAATTTCCTCAGACCATCCAGGGGATTACAGGGGCTCTCTGAAGCTTTCTCTTCTCCCTGGGTCTCTTCTGTCAAGGCAAGGGAAATCTACTAATTTTGCTAGATATGCTATTCCTTCTATCCGCAAACAACGCATACTTGTTATTTTTACAAAGTCCCAACCAAAGAAGTCACTGTCAAGTGATGCTCAACGTTTTACCTCATCAGCAGCATCTTCTCATTGGGGTCCACCGCCAAGCCGTTCCCCCAATCACGTTCGTCATCATTTAGGCCACAAGCATTATGCTTCAGCTCCAACAAACGGAGGACTGCCAGCTCCACCAATCCGGCCACA
+AAGGACTAGTTGATTTGCTACATGTGTTCTGTGTTGTTCTTGCTTTGGTAAATGTGTCTCTAGTGAAAGCAGAAGATCCATACAAGTTCTACACATGGACAGTGACTTATGGAACTCTTTCTCCTCTGGGCAGTCCTCAACAAGTTATTCTGATCAATGGTCAGTTTCCTGGTCCAAGACTTGACTTGGTAACTAATGACAACGTGATTCTCAACCTCATCAACAAGCTGGATGAGCCATTCTTGCTCACATGGAATGGCATTAAGCAGAGGAAAAATTCTTGGCAAGATGGGGTTTTAGGAACTAACTGTCCCATTCCTCCAAACTCAAATTACACTTACAAGTTTCAGGCCAAGGATCAGATTGGCACTTATACATACTTTCCATCAACTAAGATGCATAAAGCTTCTGGAGGGTTTGGAGCTCTCAATGTTCTTCATAGATCTGTCATCCCAATCCCTTATCCAAACCCTGATGGAGATTTTACATTACTCATTGGTGATTGGTACAAAACTAGCCACAAGACATTAAGCCAAACATTGGATTCTGGGAAATCTCTTGCCTTTCCTGATGGCCTCCTTATCAATGGCCAGGCTCATTCTACCTTCACTGTTAACCAGGGAAAAACCTATATGTTCAGGATCTCAAATGTTGGTCTGTCAACCTCAATTAACTTCAGAATTCAGGGACATACCCTAAAACTAGTTGAGGTTGAAGGATCACACACTATCCAGAACGAATACGACTCGCTTGATGTGCATGTTGGCCAATCAGTTTCTGTGTTAGTAACCTTAAATCAACCTCCAAAGGACTATTACATCGTTGCCTCAACAAGATTTACCAAGACTGTTCTCACTACAACCTCAGTGCTACACTAAAATTCTCAGTCAGCCGCATCAGGATCCTTGCCTGCTCCCCCTGCTGACAAT
+ATTGAAATACGTCTTGCAAAAGCTGAAGCTATTAATTGGACATCTCTCGAATATAGCAAGGATATGCCTCCCCAAAAAATTAAAGTGCCTACAATTCAATCTGAAAGGCCTGCATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTATGGTGAAAAAAGAGGAGAAAGAAGAAAAGCTGGATGGTGATGCTGCTTTGAATAAATTGTTCCGTGATATTTATCAAAATGCTGATGAGGACATGCGGAGAGCAATGAGCAAGTCATTTCTGGAGTCAAATGGAACAGTGCTGTCAACGGATTGGAAAGAAGTGGGATCCAAGAAGGTGGAAGGAAGTCCTCCAGAAGGTATGGAATTGAAGAAATGGGAGTACTAATTCAGTACAAGCTGATGCTCATGAGAGTTCAAATTCACAAAAATAAATTCTGAGAAGGGAAACAAATTCTGTAATCTTAATGGTATCGGTTATTTTG
+TGAGATCATGCGCGAAATGATGAGGAATACAGACAGAGCCATGAGCAACATTGAGTCTTCTCCTGAGGGATTCAACATGCTGAGGCGCATGTATGAAAATGTTCAAGAACCATTTTTAAATGCCACTACAATGGCTGGTAATACAGGAAATGATGGTGTCAGGAATCAATCAACTAATCCCTCAACGACTAATTCTGAAGCAACTTCCCCTGTTCCAAATACTAACCCACTTCCTAATCCTTGGTCCTCCACTGGAACTGGAGGTGCACAAGGCAACACCAGAAGGACAACTGCTGGTGGGGATGCTCGGCAGCAGGCACTCACTGGACTAGGAGGACTTGGTGTGCCAGATCTTGAAGGCATGATGGGTGGTATGCCAGATCCTGCTATGTTGACCCAATTAATGCAAAATCCAGCTATTTCACAAATGATGCAGAGTATCCTTTCCAATCCACAGACTATGAATCAGATTCTTGGTCTCAATACTGAGCAGCGTGGCATGCCTGATCTAAACTCACTAAGAAGATGTGATGCAAAACCCAGAGTTTCTTCGCTTATTTTCCTCACCTGAGACACTGCAGCAACTCATGTCTTTCCAGCAATCTCTTATGTCTCAAGTTGG
+CAGCTCTATTCTCCACCAACACAAAAACGCTCACAAACTAGCTTCTTTGGAGAAAACATTAGAGACAATAGTGGCGGTGGTGGGAACAATGGCAGCCTCACTACAAGCAGCAGCTACTTTCATGCAACCAACCAAGTTTGGTCGCACCAACACTTTGCAGCTGAAATCTACTCAATCCATTTCTAAGGCTTTTGGGTTGGAGCCCTCTGCAGCTAAGGTCTCATGTTCCCTTCAGGCTGATTTCAAGGAGTTGGCTCACAAGTGTGTTGAAGCTACCAAGATTGCTGGGTTTGCTCTTGCCACCTCTGCTCTAGTTGTCTCTGGAGCAAGTGCGGAAGGTGCTCCGAAGAGGCTAACCTTCGATGAAATCCAGAGCAAGACATACATGGAAGTGAAGGGAACCGGAACCGCAAACCAGTGCCCCACCATTGAAGGGGGAGTGGAATCATTTTCCTTCAAGGCCGGGAAGTACAATGCCAAGAAGTTCTGCCTTGAACCCACTTCATTCACAGTGAAGGCAGAGGGAGTAGCCAAGAACGCCCCACTTGAGTTCCAAAACACCAAGCTCATGACACGTCTGACCTACACCCTCGACGAGATCGAAGGACCCTTTGAGGTTTCCTCTGATGGCACTGTCAAGTTCGAGGAGAAAGATGGCATTGACTACGCTGCTGTCACAGTTCAGCTTCCCGGTGGCGAGCGTGTTCCATTCCTTTTCACCATCAAACAGTTGGTAGCATCTGGGAAGCCAGACAGCTTCAGTGGGGAGTTTCTAGTGCCTTCATACCGTGGATCTTCCTTCTTGGACCCCAAGGGAAGAGGTGCGTCAACTGGTTATGACAATGCTGTCGCATTGCCTGCTGGTGGCAGAGGAGATGAGGAAGAACTTGCTAAGGAGAACAACCAGAGTGCTTCTTCATCCCAAGGGAAGATCACCTTGAGCGTGACACAGAGCAAGCCTGATACCGGTGAGGTGATTGGTGTGTTCGAGAGCATTCAGCCGTCCGACACTGATTTGGGAGCGAAAGCTCCCAAGGATGTGAAGATCCAGGGAGTTTGGTATGCTCAGCTCGAGTCATAGACAGCTTTATCTCTCTTCTGCTTTATTTTGTATTTTGTTGTAACTTCTCAGTGTTGCTGCCATTACCTTTGACACCACTGTCCCAGCATGAGAGTGTTATCCTTGTTTGTATGTATACTATCGACTTTCAATTATAATGCTCGAAAATGTCCAAGGTTT
+AGCAGTGTTCCCATGAAACCTTCCCACTGAGTCAACTCACTCTGTACATAAAACCCTCTTCATCATCATCATGGCTTCTCAAGTTTTTCTTCAGCAAGGGTTGTTACTGTTTGCCCCAAACCAATGTTCTCCAACCAAGCTCGGTGTATCTTCTTGCCTCGGTTCTCGTAACTTTCCGTTGATTTCCTCCACCTCAATTTCATGGCGTTGCAACAACCCTCTCTCTGCCAAACCCTCTTTTGTTGTCAGAGCTGACTCCAATGTCGACGCTGCTTCCGACAATGCTGGTGAAGTTCCAGAAGCTGAAGGTAGCGTTGATCAGGTTCCTGAAGATGGAGAAGCAGAACTAGCTTCGGATTCTGAGGTGGAGCAACCCAAGCCCCCTAGAAAGCAACGAGTCAAGCTTGGAGATGTTATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAAAGCATGAGGCCGACTCCAGAAATTAGGACTGGAGATGTTGTGGAAATCAAACTGGAAGTTCCTGAGAACAAGCGTAGGTTGTCTATTTATAAAGGTATAGTCATCTCAAGACAAAATGCTGGTATTCACACAACTATTCGAATCCGAAGGATTATTGCTGGCACAGGGGTTGAGATTGTCTTCCCAATTTACTCACCAAACATCAAAGAAATCAAAGTGGTAAACCACCGTAAAGTCAGAAGAGCAAGATTGTACTATTTAAGAGACAAGCTTCCCAGATTCTCCACTTTCAAATGATACGGTTACCACTTCTCATCCTGATCTTCTTCAAAGTAGTTGCTGATATTGCAGGGCCATATTTTGGTTATTTCGTTTTGTTGTGTTGTAGAATATATCATTTTTCTTCCTCTAAATCTATCCTCCGAGAATTGGAAACAAGTGTATGTATGTTGCCCTTGATAATATTTGAAATTTGAAGTGTTCTCCCTTGCATTCCTTGGTATAGGATAGAAAGCCAAGCTCCTAAACAAACATTACTAAATATGACAGTCTAAGGAATGAGCATGTGTATCGATACCAGTTAAGTGCATTGTGAATGTATTTTTTTTTTTTATCTCTATCCATAAAAAAAGGTATGTTCATTCTTG
+AAGAAACAAGAGAGAGAAGATGATTTAGATGAGCCAAAAACAAAGGAAAAACGGCAAAAGGGAGAGAAAGGAAAATCTCCATCAGGTTTTCTTGCTCCTCTCCAGCTATCTGATGCCCTTGTAAACTTCCTTGGTACTGGAGAAAGTGAATTATCAAGATCTGATGTCATAAAAAGAATGTGGGAATACATAAAAGGAAACGACCTTCAGGATCCTTCTGACAAGAGGAAAATATTATGCGACGACAAGCTGAAAGAACTCTTTGATGTGGACTCCTTTAACGGCTTCACCGTTACAAAACTGTTGACTCCTCATTTTATAAAGGCAGAGCAGTGAGTTGCTTGTGGAAATCGGTAATGTTGTCCAATTAGGTTTGGAAGGTCCTTCTTTTGTGGCCTTTTGGCATTGTCTGCCAACACGAGGAATAGGAATTAGGAACATGACAGATTTTCAGTAAATTTTTCTCCAAGAATTTAATGTTACGTGACCATTACTTTGTTTTTTTTAATATCACGTTTTGTCACTTGGCAGTTGAAATTTTTGTATATTTTCAGTTCCTGAAGCTGCAAGGATAATGCTGACTTCTTACTCTACTCTGCATTTGCTCATATGAGGCACTACACATATCCATAATACATGAATAAATTTGCAGTATTGAA
+CATTTGTTCCATTTGCTCAGGCATTTGCAGCTGTACTTACAGCTGTCCTTACTGGTTCTCTCTATTATGTGGCTGCCTCTCCTAAAGATCCTACTTATATTGTGGCACCTGTTTTACAGTCTCGCTCTGGTCGTCAAGATTTGAAAAAGCTATTTGAAGCCTGGTATGAGAAACGGCAAATGAAAAAAATATATTCACCACTTCTGGAAGGACTACTAGCTCTCTACCTAGGATTTGAGTGGATCCAAACGAATAACATTCTTGCTCCCATTATCACACATGGCATATACTCCACAGTTATATTGGGACATGGCCTTTGGAAGATAAACGACCACCGGCGAAGACTACGTCAAAGAATCCAACAGCTCAAATCTGAAGAACAAAATTCCCAGTAGACTTTGAAATACCTTCCATGTCTGGCTGTGATACAAAAAATGTATATGTATGTATTAGAGCTGCTAATTATGTAAAGAGAAAAGATGTATATACTTGTGTTAGCTGAGGTCTCGTACACACTGAATATTCAGGTTTTGTTCACCATTTTCTAATTTCGAGTTACTATATGTAGTGTTTTCTAATAAAATGAAATAAAATCCCCAAGTTGGGTTGATTTAAATT
+GAGACCTGTTATGATTCACAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATTCTTTTAGAGCACTACAAGGGTAAATGGCCCTTGTGGCTCAGTCCTCGTCAAGCAATTGTATGTCCTGTGTCAGAGAAATCACAAGCTTATGCACTGCAGGTGCGAGATCAGATCCACCAAGCAGGATATCACGTTGATGCTGATACAACTGATCGGAAGATTCAGAAGAAGGTACGGGAAGCTCAATTAGCGCAGTACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATACAGGACAGGTGAGTGTACGGGTTAGAGATAAAGCAGACCATAGCGTTATGAGTATTGAGAATCTACTCAAACACTTCAGCGACGAAGTTGCAGCTTTTCATTGATACTTCTCTTGTGAAAACTGTTGGAAGCAAATTTTACCCCCACTCACCTAGTTTGTTCACACTTTGTGTGCATTATTTATATTTTCAGCCTGACAATTTACATTTAGATGATTTGGGTAATGACTGTATTTTCTATGTGAATTTTGGAGCGCACTGATATCGATCCATTGTTTGAAAAGCTGAGAGAAAGTGTAATCTTTTATTTTCTGTCTACATTTTAATTATGTTTTTCGTTAGTTTTTTCCTTTTATATATTTGTTTGTTAAATTGAAGGAAACTATTGTTGG
+GGCACCAGGGATCTTACAAGGCTGGATCTCCATAATAACAAGTTGACAGGGCCTATTCCTCCTCAAATTGGACGGTTGAAGCGTCTTAAAATACTCAATTTGAGGTGGAACAAACTACAGGATGCAATTCCTCCAGAAATTGGCGAGCTTAAAAGTTTAACACATCTGTACCTAAGCTTCAATAGTTTCAAGGGAGAAATTCCCAAAGAGCTAGCAAATCTTCCAGACCTTCGCTACCTTTATCTTCATGAAAACCGTTTAATTGGTAGGATACCACCTGAGTTGGGCACTCTACAAAACCTTCGGCACTTGGATGCTGGTAACAATCATTTGGTGGGTACCATAAGGGAACTCATTCGTATTGAAGGTTGCTTTCCAGCACTCCGCAATCTATATCTAAACAATAATTATTTTACTGGAGGAATGCCTGCACAACTTGCCAACTTATCCAGTCTTGAGATCTTGTACCTGTCCTACAATAAAATGTCAGGAGTTATACCATCTAGCCTTGCTCATATTCCTAAATTGACATACTTGTACTTGGATCACAATCAGTTTTCGGGGAGAATTCCCGAACCCTTTTACAAACATTCATTTTTGAAAGAAATGTACATCGAGGGAAATGCATTCCGGCCTGGTGTTAAACCCATTGGTTTCCATAAAGTGCTTGAAGTTTCTGATTCAGACTTCCTTGTTTAATGAAACTCAACATATTTAGTTTTTTAGGAAGTTTACGTGTATAATTAATGAAACAATAGCTCCTCTGATTTTCTCAATGAAAATTGCTATATGGGTAATTCAATTTTTGTCACGGCTGTCTTGTCAGAAGAATCAATAAATAATAGTGTTTTTTAACTCT
+GGAAATGAGCACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACTATTATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTATCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCAGCCGAGCAGTCACTCAAGGGATATGAGGCTGCTTCAGCCACTGCCAACACCGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGCGAGGAGAACATAAAAGCTGAAGAAGCCAAACCTACTGAGCCTGAGAATTAACTAGGTTCTTTTGGATCTTTGGCCCTGATTCAATAGTCAGATTTTTGTGGTGCTCTGCAAAGAGGGCATTTTTCAGCTTTTCTTGCAATGGATTTGGAATGGACAATATGAGCTGTCGCCACTTCATAATTACCAACCAAAGCCAAAAGATCTGAGCCTGCCTTTTCTTTATTTCTTTAAATTGTTTTTCTTTCTTACTGCCTTTATCTATTTTAAGCAAAGTGGTCGGTTGAAACAATGGATAATTCACATTTAAATCATAAGAATCTTTTTCAAGTGTTCATTACATCCGTTTTGGTTCGTTTAAAATATTGTTTCCTATGCGCTCCTAGATGGGATACAGTACAAGTATTCAACTGTTGAGCAGAGATTTTTACCTCAAAAAATTAGT
+AGACACAACATCATAGAAACAGATCAACAACACATTAAAATTAGCATGGATCATAGCTTACGTTGTTTTGGGTCGACACTACCCAAAACTCTTCTTCAGTTTCTGTTATCACCTTCACTCCTTCTCTTCATCTCCTTCTTCAGTTTCTCCAACGCAGCCTTCGACCTCGCCACCATACCCTTCAACGATGCCTATTCACCCCTCTTTGGGGATGGCAACCTTGTCCGCTCCGCCGATGGCAACGGTGTTCAACTCCTCCTCGATCGCTTCACCGGTTCTGGTTTCGTTTCTTCCAATATGTACCAGCATGGATTCTTCAGCGCCAATATCAAGCTACCATCGAATTACAGCGCTGGTATTTGCGTGGCCTTTTATACATCAAACAATGAGATGTTTGAGAAGACACACGATGAGTTAGACTTTGAATTCTTAGGTAATATAGCCGGAAAGCCTTGGAGGTTTCAGACAAACTTGTACGGCAATGGCAGCACCAACCGTGGCCGTGAGGAGCGGTACCGCCTCTGGTTTGATCCAACCAAGGGATTCCATAGATACAGCATTCTATGGACAGCTAAGAACATCATATTTTACATAGATGAGGTTCCAATTAGAGAAATTATAAGAAGTGAAGAAATGGGAGCTGATTACCCAGCAAAGCCAATGGCATTATACGCCACAATATGGGATGCATCAAATTGGGCCACATCGGGTGGAAA

data/spec/dummy/config/initializers/quorum_initializer.rb

@@ -24,7 +24,7 @@ Quorum.blast_remote      = blast['remote']
 Quorum.blast_ssh_host    = blast['ssh_host']
 Quorum.blast_ssh_user    = blast['ssh_user']
 Quorum.blast_ssh_options = blast['ssh_options']
-Quorum.blast_script      = blast['script']
+Quorum.blast_bin         = blast['bin']
 Quorum.blast_log_dir     = blast['log_dir']
 Quorum.blast_tmp_dir     = blast['tmp_dir']
 Quorum.blast_db          = blast['blast_db']

data/spec/dummy/config/initializers/resque.rb

@@ -1 +1,4 @@
-Resque.inline = Rails.env.test?
+if Rails.env.test?
+  Resque.inline = true
+  Resque.redis  = 'localhost:9736'
+end

data/spec/dummy/config/quorum_settings.yml

@@ -22,7 +22,7 @@
 #       password: "secret password"
 #       port: 8888
 #
-#   script: Absolute path to search script.
+#   bin: Absolute path to quorum/bin.
 #
 #   log_dir: Absolute path to log file directory.
 #
@@ -72,7 +72,7 @@ development:
       # Example:
       # password: "secret password"
       # port: 8888
-    script: "%{RAILS_ROOT}/quorum/bin/search"
+    bin: "%{RAILS_ROOT}/quorum/bin"
     log_dir: "%{RAILS_ROOT}/quorum/log"
     tmp_dir: "%{RAILS_ROOT}/quorum/tmp"
     blast_db: "%{RAILS_ROOT}/quorum/blastdb"
@@ -99,7 +99,7 @@ test:
       # Example:
       # password: "secret password"
       # port: 8888
-    script: "%{RAILS_ROOT}/quorum/bin/search"
+    bin: "%{RAILS_ROOT}/quorum/bin"
     log_dir: "%{RAILS_ROOT}/quorum/log"
     tmp_dir: "%{RAILS_ROOT}/quorum/tmp"
     blast_db: "%{RAILS_ROOT}/quorum/blastdb"
@@ -122,7 +122,7 @@ production:
       # Example:
       # password: "secret password"
       # port: 8888
-    script:
+    bin:
     log_dir:
     tmp_dir:
     blast_db:

data/spec/dummy/db/schema.rb

@@ -11,7 +11,7 @@
 #
 # It's strongly recommended to check this file into your version control system.
 
-ActiveRecord::Schema.define(:version => 20111227224920) do
+ActiveRecord::Schema.define(:version => 20120110181717) do
 
   create_table "quorum_blastn_job_reports", :force => true do |t|
     t.string   "query"
@@ -41,6 +41,7 @@ ActiveRecord::Schema.define(:version => 20111227224920) do
     t.integer  "blastn_job_id"
     t.datetime "created_at"
     t.datetime "updated_at"
+    t.string   "hit_display_id"
   end
 
   create_table "quorum_blastn_jobs", :force => true do |t|
@@ -86,6 +87,7 @@ ActiveRecord::Schema.define(:version => 20111227224920) do
     t.integer  "blastp_job_id"
     t.datetime "created_at"
     t.datetime "updated_at"
+    t.string   "hit_display_id"
   end
 
   create_table "quorum_blastp_jobs", :force => true do |t|
@@ -131,6 +133,7 @@ ActiveRecord::Schema.define(:version => 20111227224920) do
     t.integer  "blastx_job_id"
     t.datetime "created_at"
     t.datetime "updated_at"
+    t.string   "hit_display_id"
   end
 
   create_table "quorum_blastx_jobs", :force => true do |t|
@@ -148,6 +151,9 @@ ActiveRecord::Schema.define(:version => 20111227224920) do
     t.datetime "updated_at"
   end
 
+  create_table "quorum_hmmer_job_reports", :force => true do |t|
+  end
+
   create_table "quorum_hmmer_jobs", :force => true do |t|
     t.string   "expectation"
     t.integer  "min_score"
@@ -194,6 +200,7 @@ ActiveRecord::Schema.define(:version => 20111227224920) do
     t.integer  "tblastn_job_id"
     t.datetime "created_at"
     t.datetime "updated_at"
+    t.string   "hit_display_id"
   end
 
   create_table "quorum_tblastn_jobs", :force => true do |t|