pipehat 0.1.0

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Files changed (83) hide show
  1. checksums.yaml +7 -0
  2. data/.gitignore +9 -0
  3. data/.rubocop.yml +18 -0
  4. data/.travis.yml +10 -0
  5. data/CODE_OF_CONDUCT.md +74 -0
  6. data/Gemfile +8 -0
  7. data/LICENSE.txt +21 -0
  8. data/README.md +184 -0
  9. data/Rakefile +10 -0
  10. data/bin/console +10 -0
  11. data/bin/setup +8 -0
  12. data/lib/pipehat.rb +22 -0
  13. data/lib/pipehat/component/base.rb +30 -0
  14. data/lib/pipehat/define_type.rb +68 -0
  15. data/lib/pipehat/field/base.rb +59 -0
  16. data/lib/pipehat/message.rb +32 -0
  17. data/lib/pipehat/node.rb +53 -0
  18. data/lib/pipehat/parser.rb +149 -0
  19. data/lib/pipehat/repeat/base.rb +31 -0
  20. data/lib/pipehat/segment/aip.rb +21 -0
  21. data/lib/pipehat/segment/ais.rb +21 -0
  22. data/lib/pipehat/segment/al1.rb +15 -0
  23. data/lib/pipehat/segment/base.rb +124 -0
  24. data/lib/pipehat/segment/dg1.rb +30 -0
  25. data/lib/pipehat/segment/err.rb +21 -0
  26. data/lib/pipehat/segment/evn.rb +16 -0
  27. data/lib/pipehat/segment/in1.rb +64 -0
  28. data/lib/pipehat/segment/msa.rb +17 -0
  29. data/lib/pipehat/segment/msh.rb +52 -0
  30. data/lib/pipehat/segment/obr.rb +63 -0
  31. data/lib/pipehat/segment/obx.rb +37 -0
  32. data/lib/pipehat/segment/orc.rb +43 -0
  33. data/lib/pipehat/segment/pid.rb +49 -0
  34. data/lib/pipehat/segment/prd.rb +23 -0
  35. data/lib/pipehat/segment/pv1.rb +63 -0
  36. data/lib/pipehat/segment/rf1.rb +34 -0
  37. data/lib/pipehat/segment/rgs.rb +12 -0
  38. data/lib/pipehat/segment/sch.rb +36 -0
  39. data/lib/pipehat/subcomponent/base.rb +27 -0
  40. data/lib/pipehat/types/aui.rb +8 -0
  41. data/lib/pipehat/types/ce.rb +11 -0
  42. data/lib/pipehat/types/cne.rb +27 -0
  43. data/lib/pipehat/types/cnn.rb +16 -0
  44. data/lib/pipehat/types/cp.rb +11 -0
  45. data/lib/pipehat/types/cq.rb +7 -0
  46. data/lib/pipehat/types/cwe.rb +27 -0
  47. data/lib/pipehat/types/cx.rb +17 -0
  48. data/lib/pipehat/types/dld.rb +7 -0
  49. data/lib/pipehat/types/dt.rb +4 -0
  50. data/lib/pipehat/types/dtm.rb +4 -0
  51. data/lib/pipehat/types/ei.rb +9 -0
  52. data/lib/pipehat/types/eip.rb +7 -0
  53. data/lib/pipehat/types/erl.rb +11 -0
  54. data/lib/pipehat/types/fn.rb +10 -0
  55. data/lib/pipehat/types/hd.rb +8 -0
  56. data/lib/pipehat/types/id.rb +4 -0
  57. data/lib/pipehat/types/is.rb +4 -0
  58. data/lib/pipehat/types/mo.rb +7 -0
  59. data/lib/pipehat/types/moc.rb +7 -0
  60. data/lib/pipehat/types/msg.rb +8 -0
  61. data/lib/pipehat/types/ndl.rb +16 -0
  62. data/lib/pipehat/types/nm.rb +4 -0
  63. data/lib/pipehat/types/pl.rb +16 -0
  64. data/lib/pipehat/types/pln.rb +9 -0
  65. data/lib/pipehat/types/prl.rb +8 -0
  66. data/lib/pipehat/types/pt.rb +7 -0
  67. data/lib/pipehat/types/rc.rb +7 -0
  68. data/lib/pipehat/types/sad.rb +8 -0
  69. data/lib/pipehat/types/si.rb +4 -0
  70. data/lib/pipehat/types/snm.rb +4 -0
  71. data/lib/pipehat/types/st.rb +4 -0
  72. data/lib/pipehat/types/ts.rb +7 -0
  73. data/lib/pipehat/types/tx.rb +4 -0
  74. data/lib/pipehat/types/varies.rb +28 -0
  75. data/lib/pipehat/types/vid.rb +8 -0
  76. data/lib/pipehat/types/xad.rb +28 -0
  77. data/lib/pipehat/types/xcn.rb +30 -0
  78. data/lib/pipehat/types/xon.rb +15 -0
  79. data/lib/pipehat/types/xpn.rb +20 -0
  80. data/lib/pipehat/types/xtn.rb +22 -0
  81. data/lib/pipehat/version.rb +3 -0
  82. data/pipehat.gemspec +27 -0
  83. metadata +127 -0
@@ -0,0 +1,59 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ module Field
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+ class Base < Pipehat::Node
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+ def initialize(segment, fnum)
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+ @segment = segment
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+ @fnum = fnum
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+ end
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+
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+ attr_reader :segment, :fnum
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+
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+ def repeat(rnum)
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+ repeat_class.new(segment, fnum, rnum)
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+ end
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+
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+ def [](rnum)
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+ repeat(rnum)
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+ end
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+
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+ def []=(rnum, value)
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+ repeat(rnum).set(value)
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+ end
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+
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+ def first
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+ repeat(1)
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+ end
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+
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+ # Set on a field should replace the entire tree at this field
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+ # This should discard anything under repeats etc
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+ def set(value)
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+ segment.set_field(fnum, value)
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+ end
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+
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+ # calling component(n) on a field assumes you mean the first repeat
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+ def component(cnum, type = Pipehat::Component::Base)
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+ first.component(cnum, type)
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+ end
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+
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+ def to_hl7
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+ (segment.tree(fnum) || []).map do |repeat|
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+ (repeat || []).map do |component|
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+ (component || []).join(parser.subcomponent_sep)
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+ end.join(parser.component_sep)
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+ end.join(parser.repetition_sep)
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+ end
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+
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+ def inspect
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+ inspect_node(fnum)
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+ end
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+
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+ private
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+
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+ def repeat_class
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+ Object.const_get(self.class.name.sub(/Field/, "Repeat"))
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+ end
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+ end
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+ end
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+ end
@@ -0,0 +1,32 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ class Message
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+ def initialize(hl7 = "", parser: Pipehat::DEFAULT_PARSER)
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+ @parser = parser
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+ @segments = parser.parse(hl7)
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+ end
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+
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+ attr_reader :parser
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+
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+ def to_hl7
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+ segments.map(&:to_hl7).join(parser.segment_sep)
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+ end
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+
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+ def <<(segment)
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+ @segments << segment
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+ end
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+
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+ # Returns an enumerator over the message's segments
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+ # The optional parameter limits it to the given type
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+ def segments(type = nil)
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+ return to_enum(:segments, type) unless block_given?
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+
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+ @segments.each do |segment|
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+ next if type && segment.segment_name != type.to_s
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+
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+ yield segment
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+ end
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+ end
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+ end
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+ end
@@ -0,0 +1,53 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ # Parent class of all accessor types (Field, Repeat, (Sub)Component
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+ # providing common methods
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+ class Node
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+ def fnum
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+ 1
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+ end
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+
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+ def rnum
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+ 1
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+ end
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+
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+ def cnum
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+ 1
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+ end
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+
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+ def snum
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+ 1
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+ end
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+
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+ def to_s
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+ segment.parser.unescape(unescaped)
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+ end
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+
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+ def unescaped
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+ segment.get(fnum, rnum, cnum, snum)
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+ end
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+
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+ def component_names
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+ self.class.component_names
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+ end
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+
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+ def self.component_names
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+ @component_names ||= []
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+ end
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+
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+ def parser
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+ segment.parser
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+ end
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+
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+ private
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+
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+ def inspect_node(*nums)
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+ s = "#<#{self.class} #{segment.segment_name}(#{nums.join(",")}) "
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+ maxlen = 76 - s.length
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+ fragment = to_hl7
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+ fragment = fragment[0, maxlen - 3] + "..." if fragment.length > maxlen
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+ "#{s}#{fragment}>"
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+ end
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+ end
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+ end
@@ -0,0 +1,149 @@
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+ # frozen_string_literal: true
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+
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+ require "strscan"
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+
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+ module Pipehat
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+ class Parser
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+ def segment_sep
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+ "\r"
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+ end
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+
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+ def field_sep
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+ "|"
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+ end
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+
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+ def repetition_sep
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+ "~"
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+ end
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+
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+ def component_sep
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+ "^"
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+ end
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+
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+ def subcomponent_sep
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+ "&"
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+ end
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+
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+ def escape_char
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+ "\\"
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+ end
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+
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+ def escaped_field_sep
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+ "#{escape_char}F#{escape_char}"
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+ end
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+
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+ def escaped_repetition_sep
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+ "#{escape_char}R#{escape_char}"
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+ end
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+
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+ def escaped_component_sep
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+ "#{escape_char}S#{escape_char}"
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+ end
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+
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+ def escaped_subcomponent_sep
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+ "#{escape_char}T#{escape_char}"
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+ end
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+
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+ def escaped_escape_char
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+ "#{escape_char}E#{escape_char}"
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+ end
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+
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+ def escaped_field_sep_regex
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+ @escaped_field_sep_regex ||= Regexp.new Regexp.quote escaped_field_sep
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+ end
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+
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+ def escaped_repetition_sep_regex
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+ @escaped_repetition_sep_regex ||= Regexp.new Regexp.quote escaped_repetition_sep
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+ end
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+
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+ def escaped_component_sep_regex
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+ @escaped_component_sep_regex ||= Regexp.new Regexp.quote escaped_component_sep
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+ end
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+
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+ def escaped_subcomponent_sep_regex
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+ @escaped_subcomponent_sep_regex ||= Regexp.new Regexp.quote escaped_subcomponent_sep
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+ end
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+
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+ def escaped_escape_char_regex
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+ @escaped_escape_char_regex ||= Regexp.new Regexp.quote escaped_escape_char
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+ end
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+
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+ def escaped_hex_regex
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+ @escaped_hex_regex ||= Regexp.new "#{Regexp.quote escape_char}X\\h+#{Regexp.quote escape_char}"
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+ end
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+
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+ def msh2
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+ @msh2 ||= [
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+ component_sep,
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+ repetition_sep,
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+ escape_char,
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+ subcomponent_sep
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+ ].join
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+ end
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+
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+ def escape(string)
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+ return "" if string.nil?
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+
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+ string.each_char.map do |chr|
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+ case chr
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+ when field_sep then escaped_field_sep
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+ when repetition_sep then escaped_repetition_sep
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+ when component_sep then escaped_component_sep
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+ when subcomponent_sep then escaped_subcomponent_sep
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+ when escape_char then escaped_escape_char
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+ else
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+ if (32.chr..127.chr).cover?(chr)
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+ chr
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+ else
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+ format("\\X%02X\\", chr.ord)
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+ end
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+ end
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+ end.join
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+ end
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+
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+ def unescape(string)
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+ return "" if string.nil?
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+ return string unless string.include?(escape_char)
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+
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+ s = StringScanner.new(string)
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+ out = String.new
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+ until s.eos?
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+ if s.scan(escaped_field_sep_regex)
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+ out << field_sep
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+ elsif s.scan(escaped_repetition_sep_regex)
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+ out << repetition_sep
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+ elsif s.scan(escaped_component_sep_regex)
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+ out << component_sep
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+ elsif s.scan(escaped_subcomponent_sep_regex)
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+ out << subcomponent_sep
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+ elsif s.scan(escaped_escape_char_regex)
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+ out << escape_char
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+ elsif s.scan(escaped_hex_regex)
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+ s.matched[2..-2].scan(/../).each { |hex| out << hex.to_i(16).chr }
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+ else
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+ out << s.getch
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+ end
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+ end
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+ out
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+ end
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+
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+ # Returns an array of Pipehat::Segments of the right class
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+ def parse(hl7)
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+ hl7.split(segment_sep).map do |seg|
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+ name = seg[0, seg.index("|")]
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+ klass = if Pipehat::Segment.const_defined?(name)
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+ Pipehat::Segment.const_get(name)
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+ else
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+ Pipehat::Segment::Base
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+ end
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+ klass.new(seg, parser: self)
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+ end
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+ end
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+
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+ def inspect
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+ "#<#{self.class} #{field_sep}#{msh2}>"
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+ end
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+ end
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+
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+ DEFAULT_PARSER = Parser.new
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+ end
@@ -0,0 +1,31 @@
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+ module Pipehat
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+ module Repeat
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+ class Base < Pipehat::Node
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+ def initialize(segment, fnum, rnum)
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+ @segment = segment
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+ @fnum = fnum
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+ @rnum = rnum
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+ end
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+
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+ attr_reader :segment, :fnum, :rnum
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+
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+ def component(cnum, type = Pipehat::Component::Base)
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+ type.new(segment, fnum, rnum, cnum)
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+ end
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+
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+ def set(value)
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+ segment.set_repeat(fnum, rnum, value)
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+ end
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+
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+ def to_hl7
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+ (segment.tree(fnum, rnum) || []).map do |component|
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+ (component || []).join(parser.subcomponent_sep)
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+ end.join(parser.component_sep)
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+ end
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+
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+ def inspect
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+ inspect_node(fnum, rnum)
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+ end
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+ end
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+ end
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+ end
@@ -0,0 +1,21 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ module Segment
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+ # Appointment Information - Personnel Resource
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+ class AIP < Base
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+ add_field :set_id, :SI
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+ add_field :segment_action_code, :ID
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+ add_field :personnel_resource_id, :XCN
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+ add_field :resource_type, :CWE
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+ add_field :resource_group, :CWE
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+ add_field :start_date_time, :DTM
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+ add_field :start_date_time_offset, :NM
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+ add_field :start_date_time_offset_units, :CNE
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+ add_field :duration, :NM
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+ add_field :duration_units, :CNE
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+ add_field :allow_substitution_code, :CWE
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+ add_field :filler_status_code, :CWE
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+ end
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+ end
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+ end
@@ -0,0 +1,21 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ module Segment
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+ # Appointment Information
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+ class AIS < Base
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+ add_field :set_id, :SI
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+ add_field :segment_action_code, :ID
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+ add_field :universal_service_identifier, :CWE
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+ add_field :start_date_time, :DTM
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+ add_field :start_date_time_offset, :NM
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+ add_field :start_date_time_offset_units, :CNE
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+ add_field :duration, :NM
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+ add_field :duration_units, :CNE
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+ add_field :allow_substitution_code, :CWE
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+ add_field :filler_status_code, :CWE
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+ add_field :placer_supplemental_service_information, :CWE
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+ add_field :filler_supplemental_service_information, :CWE
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+ end
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+ end
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+ end
@@ -0,0 +1,15 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ module Segment
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+ # Patient Allergy Information
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+ class AL1 < Base
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+ add_field :set_id, :SI
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+ add_field :allergen_type_code, :CE
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+ add_field :allergen_code, :CE
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+ add_field :allergy_severity_code, :CE
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+ add_field :allergy_reaction_code, :ST
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+ add_field :identification_date, :DT
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+ end
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+ end
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+ end
@@ -0,0 +1,124 @@
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+ # frozen_string_literal: true
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+
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+ module Pipehat
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+ module Segment
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+ class Base
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+ def initialize(string = nil, parser: Pipehat::DEFAULT_PARSER)
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+ string ||= self.class.name.split("::").last
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+ # storage is nested array (to depth of subcomponents). The unescaped
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+ # strings is stored (escape/unescape occurs in accessors).
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+ @data = string.split(parser.field_sep).map do |field|
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+ field.split(parser.repetition_sep).map do |repeat|
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+ repeat.split(parser.component_sep).map do |component|
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+ component.split(parser.subcomponent_sep)
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+ end
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+ end
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+ end
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+ @parser = parser
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+ end
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+
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+ # Returns a reference to a field by number
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+ def field(fnum, type = Pipehat::Field::Base)
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+ type.new(self, fnum)
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+ end
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+
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+ # Return the raw (unescaped) string at the specified position.
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+ # If the position doesn't exist, returns nil.
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+ #
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+ # Note this works by assuming @data always has arrays nesting to
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+ # the subcomponent position
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+ def get(fnum, rnum, cnum, snum)
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+ tree(fnum, rnum, cnum, snum)
32
+ end
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+
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+ def tree(fnum, rnum = nil, cnum = nil, snum = nil)
35
+ tmp = @data.dig(fnum)
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+ tmp = tmp&.dig(rnum - 1) if rnum
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+ tmp = tmp&.dig(cnum - 1) if cnum
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+ tmp = tmp&.dig(snum - 1) if snum
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+ tmp
40
+ end
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+
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+ # TODO: set_* currently assume a string only. Would be good to accept
43
+ # and insert arrays (for nodes higher than subcomponents)
44
+ # There should also be a way to avoid the escaping (eg, FT values use
45
+ # escape sequences that shouldn't be escaped again).
46
+
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+ def set_field(fnum, value)
48
+ @data[fnum] = [[[parser.escape(value)]]]
49
+ end
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+
51
+ def set_repeat(fnum, rnum, value)
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+ @data[fnum] ||= [[[]]]
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+ @data[fnum][rnum - 1] = [[parser.escape(value)]]
54
+ end
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+
56
+ def set_component(fnum, rnum, cnum, value)
57
+ @data[fnum] ||= [[[]]]
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+ @data[fnum][rnum - 1] ||= [[]]
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+ @data[fnum][rnum - 1][cnum - 1] = [parser.escape(value)]
60
+ end
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+
62
+ def set_subcomponent(fnum, rnum, cnum, snum, value)
63
+ @data[fnum] ||= [[[]]]
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+ @data[fnum][rnum - 1] ||= [[]]
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+ @data[fnum][rnum - 1][cnum - 1] ||= []
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+ @data[fnum][rnum - 1][cnum - 1][snum - 1] = parser.escape(value)
67
+ end
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+
69
+ def field_names
70
+ self.class.field_names
71
+ end
72
+
73
+ def segment_name
74
+ field(0).to_s
75
+ end
76
+
77
+ attr_accessor :parser
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+
79
+ def to_hl7
80
+ @data.map do |field|
81
+ (field || []).map do |repeat|
82
+ (repeat || []).map do |component|
83
+ (component || []).join(parser.subcomponent_sep)
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+ end.join(parser.component_sep)
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+ end.join(parser.repetition_sep)
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+ end.join(parser.field_sep)
87
+ end
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+
89
+ class << self
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+ # returns a list of the fields define on this segment as symbols
91
+ def field_names
92
+ @field_names ||= []
93
+ end
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+
95
+ def add_field(name, type, options = {})
96
+ field_names << name
97
+ count = field_names.size
98
+ klass = Object.const_get("Pipehat::Field::#{type}")
99
+
100
+ invalid_options = options.keys - %i[setter]
101
+ raise "Invalid options: #{invalid_options.join(", ")}" if invalid_options.any?
102
+
103
+ define_method name do
104
+ field(count, klass)
105
+ end
106
+
107
+ return unless options.fetch(:setter, true)
108
+
109
+ define_method "#{name}=" do |value|
110
+ send(name).set(value)
111
+ end
112
+ end
113
+ end
114
+
115
+ def inspect
116
+ s = "#<#{self.class} "
117
+ maxlen = 76 - s.length
118
+ fragment = to_hl7
119
+ fragment = fragment[0, maxlen - 3] + "..." if fragment.length > maxlen
120
+ "#{s}#{fragment}>"
121
+ end
122
+ end
123
+ end
124
+ end