pione 0.4.2 → 0.5.0.alpha.1

data/example/OddSelector/Package.pione

@@ -0,0 +1,2 @@
+.@ PackageName :: "OddSelector"
+.@ Entrance :: OddSelector

data/example/OddSelector/pione-package.json

@@ -4,6 +4,7 @@
 
   ],
   "Documents": [
+    "Package.pione",
     "OddSelector.pione"
   ],
   "Scenarios": [
@@ -11,5 +12,8 @@
   ],
   "Bins": [
 
+  ],
+  "Etcs": [
+
   ]
 }

data/example/OddSelector/scenario/pione-scenario.json

@@ -2,22 +2,22 @@
   "ScenarioName": "from 1 to 10",
   "ParamSet": null,
   "Inputs": [
-    "input/4.i",
-    "input/3.i",
+    "input/9.i",
+    "input/2.i",
+    "input/10.i",
     "input/5.i",
+    "input/3.i",
+    "input/7.i",
     "input/8.i",
     "input/1.i",
-    "input/9.i",
     "input/6.i",
-    "input/10.i",
-    "input/2.i",
-    "input/7.i"
+    "input/4.i"
   ],
   "Outputs": [
-    "output/7.res",
-    "output/1.res",
     "output/3.res",
     "output/9.res",
+    "output/1.res",
+    "output/7.res",
     "output/5.res"
   ]
 }

data/example/ParentPackage/ParentPackage.pione

@@ -0,0 +1,13 @@
+.@ PackageName :: "ParentPackage"
+
+Rule Main
+  output 'result.txt'
+Flow
+  rule DoAction
+End
+
+Rule DoAction
+  output 'result.txt'.stdout
+Action
+  echo "This is a parent's action."
+End

data/example/ParentPackage/pione-package.json

@@ -0,0 +1,18 @@
+{
+  "PackageName": "ParentPackage",
+  "Parents": [
+
+  ],
+  "Documents": [
+    "ParentPackage.pione"
+  ],
+  "Scenarios": [
+
+  ],
+  "Bins": [
+
+  ],
+  "Etcs": [
+
+  ]
+}

data/example/PegasusWMS/Merge/Package.pione

@@ -0,0 +1,2 @@
+.@ PackageName :: "PegasusWMSMerge"
+.@ Entrance :: PegasusWMSMerge

data/example/PegasusWMS/Merge/PegasusWMSMerge.action.md

@@ -0,0 +1,17 @@
+# Actions for PegasusWMS-Merge package
+
+## List
+
+Create a file that contains names of files in a directory.
+
+```
+ls -l {$DIRS[$INDEX+1]} > {$O[1]}
+```
+
+## Join
+
+Concatenate all files into a file.
+
+```
+cat {$I[1]} > {$O[1]}
+```

data/example/PegasusWMS/Merge/{Merge.pione → PegasusWMSMerge.pione}

@@ -1,10 +1,16 @@
-.@ PackageName :: "PegasusWMS-Merge"
 
-Rule Main
+Rule PegasusWMSMerge
   output 'binaries.txt'
 Flow
-  rule List
   rule Join
+  rule List
+End
+
+Rule Join
+  input 'bin_*.txt'.all
+  output 'binaries.txt'
+Action
+  cat {$I[1]} > {$O[1]}
 End
 
 Rule List
@@ -14,10 +20,3 @@ Rule List
 Action
   ls -l {$DIRS[$INDEX+1]} > {$O[1]}
 End
-
-Rule Join
-  input 'bin_*.txt'.all
-  output 'binaries.txt'
-Action
-  cat {$I[1]} > {$O[1]}
-End

data/example/PegasusWMS/Merge/PegasusWMSMerge.pnml

@@ -0,0 +1,217 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!--PLEASE DO NOT EDIT THIS FILE
+Created with Workflow PetriNet Designer Version 1.0 (woped.org)-->
+<pnml>
+  <net type="http://www.informatik.hu-berlin.de/top/pntd/ptNetb" id="noID">
+    <place id="p5">
+      <name>
+        <text>>'binaries.txt'</text>
+        <graphics>
+          <offset x="650" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="650" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+    </place>
+    <place id="p4">
+      <name>
+        <text>'bin_*.txt'.all</text>
+        <graphics>
+          <offset x="490" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="490" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+    </place>
+    <place id="p3">
+      <name>
+        <text>'bin_{$INDEX}.txt'</text>
+        <graphics>
+          <offset x="330" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="330" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+    </place>
+    <place id="p2">
+      <name>
+        <text>$DIRS := ("/bin" | "/usr/bin" | "/usr/local/bin").all</text>
+        <graphics>
+          <offset x="100" y="290"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="100" y="250"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <initialMarking>
+        <text>1</text>
+      </initialMarking>
+    </place>
+    <place id="p1">
+      <name>
+        <text>$INDEX := 0.upto(2)</text>
+        <graphics>
+          <offset x="100" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="100" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <initialMarking>
+        <text>1</text>
+      </initialMarking>
+    </place>
+    <transition id="t3">
+      <name>
+        <text>Join</text>
+        <graphics>
+          <offset x="570" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="570" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <toolspecific tool="WoPeD" version="1.0">
+        <time>0</time>
+        <timeUnit>1</timeUnit>
+        <orientation>1</orientation>
+      </toolspecific>
+    </transition>
+    <transition id="t2">
+      <name>
+        <text/>
+        <graphics>
+          <offset x="410" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="410" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <toolspecific tool="WoPeD" version="1.0">
+        <time>0</time>
+        <timeUnit>1</timeUnit>
+        <orientation>1</orientation>
+      </toolspecific>
+    </transition>
+    <transition id="t1">
+      <name>
+        <text>List</text>
+        <graphics>
+          <offset x="250" y="210"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="250" y="170"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <toolspecific tool="WoPeD" version="1.0">
+        <time>0</time>
+        <timeUnit>1</timeUnit>
+        <orientation>1</orientation>
+      </toolspecific>
+    </transition>
+    <arc id="a1" source="p1" target="t1">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a2" source="p2" target="t1">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a3" source="t1" target="p3">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a4" source="p3" target="t2">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a5" source="t2" target="p4">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a6" source="p4" target="t3">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a7" source="t3" target="p5">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <toolspecific tool="WoPeD" version="1.0">
+      <bounds>
+        <position x="2" y="25"/>
+        <dimension x="1049" y="524"/>
+      </bounds>
+      <scale>100</scale>
+      <treeWidthRight>823</treeWidthRight>
+      <overviewPanelVisible>true</overviewPanelVisible>
+      <treeHeightOverview>100</treeHeightOverview>
+      <treePanelVisible>true</treePanelVisible>
+      <verticalLayout>false</verticalLayout>
+      <resources/>
+      <simulations/>
+      <partnerLinks/>
+      <variables/>
+    </toolspecific>
+  </net>
+</pnml>

data/example/PegasusWMS/Merge/pione-package.json

@@ -1,15 +1,19 @@
 {
-  "PackageName": "PegasusWMS-Merge",
+  "PackageName": "PegasusWMSMerge",
   "Parents": [
 
   ],
   "Documents": [
-    "Merge.pione"
+    "Package.pione",
+    "PegasusWMSMerge.pione"
   ],
   "Scenarios": [
 
   ],
   "Bins": [
 
+  ],
+  "Etcs": [
+
   ]
 }

data/example/PegasusWMS/Pipeline/Package.pione

@@ -0,0 +1,2 @@
+.@ PackageName :: "PegasusWMSPipeline"
+.@ Entrance :: PegasusWMSPipeline

data/example/PegasusWMS/Pipeline/PegasusWMSPipeline.action.md

@@ -0,0 +1,17 @@
+# Actions for PegasusWMS-Pipeline package
+
+## GetHTML
+
+Get a HTML file from http://pegasus.isi.edu.
+
+```
+curl -o {$O[1]} "http://pegasus.isi.edu"
+```
+
+## Count
+
+Create a character count file.
+
+```
+wc {$I[1]} > {$O[1]}
+```

data/example/PegasusWMS/Pipeline/{Pipeline.pione → PegasusWMSPipeline.pione}

@@ -1,16 +1,9 @@
-.@ PackageName :: "PegasusWMS-Pipeline"
 
-Rule Main
+Rule PegasusWMSPipeline
   output 'count.txt'
 Flow
-  rule GetHTML
   rule Count
-End
-
-Rule GetHTML
-  output 'pegasus.html'
-Action
-  curl -o {$O[1]} "http://pegasus.isi.edu"
+  rule GetHTML
 End
 
 Rule Count
@@ -20,3 +13,8 @@ Action
   wc {$I[1]} > {$O[1]}
 End
 
+Rule GetHTML
+  output 'pegasus.html'
+Action
+  curl -o {$O[1]} "http://pegasus.isi.edu"
+End

data/example/PegasusWMS/Pipeline/PegasusWMSPipeline.pnml

@@ -0,0 +1,137 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!--PLEASE DO NOT EDIT THIS FILE
+Created with Workflow PetriNet Designer Version 1.0 (woped.org)-->
+<pnml>
+  <net type="http://www.informatik.hu-berlin.de/top/pntd/ptNetb" id="noID">
+    <place id="p3">
+      <name>
+        <text>>'count.txt'</text>
+        <graphics>
+          <offset x="610" y="270"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="610" y="230"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+    </place>
+    <place id="p2">
+      <name>
+        <text>'pegasus.html'</text>
+        <graphics>
+          <offset x="370" y="270"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="370" y="230"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+    </place>
+    <place id="p1">
+      <name>
+        <text/>
+        <graphics>
+          <offset x="150" y="270"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="150" y="230"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+    </place>
+    <transition id="t2">
+      <name>
+        <text>Count</text>
+        <graphics>
+          <offset x="490" y="270"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="490" y="230"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <toolspecific tool="WoPeD" version="1.0">
+        <time>0</time>
+        <timeUnit>1</timeUnit>
+        <orientation>1</orientation>
+      </toolspecific>
+    </transition>
+    <transition id="t1">
+      <name>
+        <text>GetHTML</text>
+        <graphics>
+          <offset x="260" y="270"/>
+        </graphics>
+      </name>
+      <graphics>
+        <position x="260" y="230"/>
+        <dimension x="40" y="40"/>
+      </graphics>
+      <toolspecific tool="WoPeD" version="1.0">
+        <time>0</time>
+        <timeUnit>1</timeUnit>
+        <orientation>1</orientation>
+      </toolspecific>
+    </transition>
+    <arc id="a1" source="p1" target="t1">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a2" source="t1" target="p2">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a3" source="p2" target="t2">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <arc id="a4" source="t2" target="p3">
+      <inscription>
+        <text>1</text>
+      </inscription>
+      <graphics/>
+      <toolspecific tool="WoPeD" version="1.0">
+        <probability>1.0</probability>
+        <displayProbabilityOn>false</displayProbabilityOn>
+        <displayProbabilityPosition x="500.0" y="0.0"/>
+      </toolspecific>
+    </arc>
+    <toolspecific tool="WoPeD" version="1.0">
+      <bounds>
+        <position x="2" y="25"/>
+        <dimension x="1905" y="784"/>
+      </bounds>
+      <scale>100</scale>
+      <treeWidthRight>1551</treeWidthRight>
+      <overviewPanelVisible>true</overviewPanelVisible>
+      <treeHeightOverview>100</treeHeightOverview>
+      <treePanelVisible>true</treePanelVisible>
+      <verticalLayout>false</verticalLayout>
+      <resources/>
+      <simulations/>
+      <partnerLinks/>
+      <variables/>
+    </toolspecific>
+  </net>
+</pnml>