picky-statistics 4.5.0 → 4.5.1

data/lib/picky-statistics/application/javascripts/d3/lib/science/science.lin.js

@@ -1,27 +0,0 @@
-(function(){science.lin = {};
-/**
- * Solves tridiagonal systems of linear equations.
- *
- * Source: http://en.wikipedia.org/wiki/Tridiagonal_matrix_algorithm
- *
- * @param {number[]} a
- * @param {number[]} b
- * @param {number[]} c
- * @param {number[]} d
- * @param {number[]} x
- * @param {number} n
- */
-science.lin.tridag = function(a, b, c, d, x, n) {
-  var i,
-      m;
-  for (i = 1; i < n; i++) {
-    m = a[i] / b[i - 1];
-    b[i] -= m * c[i - 1];
-    d[i] -= m * d[i - 1];
-  }
-  x[n - 1] = d[n - 1] / b[n - 1];
-  for (i = n - 2; i >= 0; i--) {
-    x[i] = (d[i] - c[i] * x[i + 1]) / b[i];
-  }
-};
-})()

data/lib/picky-statistics/application/javascripts/d3/lib/science/science.lin.min.js

@@ -1 +0,0 @@
-(function(){science.lin={},science.lin.tridag=function(a,b,c,d,e,f){var g,h;for(g=1;g<f;g++)h=a[g]/b[g-1],b[g]-=h*c[g-1],d[g]-=h*d[g-1];e[f-1]=d[f-1]/b[f-1];for(g=f-2;g>=0;g--)e[g]=(d[g]-c[g]*e[g+1])/b[g]}})()

data/lib/picky-statistics/application/javascripts/d3/lib/science/science.min.js

@@ -1 +0,0 @@
-(function(){science={version:"1.7.0"},science.ascending=function(a,b){return a-b},science.EULER=.5772156649015329,science.expm1=function(a){return a<1e-5&&a>-0.00001?a+.5*a*a:Math.exp(a)-1},science.functor=function(a){return typeof a=="function"?a:function(){return a}},science.hypot=function(a,b){a=Math.abs(a),b=Math.abs(b);var c,d;a>b?(c=a,d=b):(c=b,d=a);var e=d/c;return c*Math.sqrt(1+e*e)},science.quadratic=function(){function b(b,c,d){var e=c*c-4*b*d;if(e>0){e=Math.sqrt(e)/(2*b);return a?[{r:-c-e,i:0},{r:-c+e,i:0}]:[-c-e,-c+e]}if(e===0){e=-c/(2*b);return a?[{r:e,i:0}]:[e]}if(a){e=Math.sqrt(-e)/(2*b);return[{r:-c,i:-e},{r:-c,i:e}]}return[]}var a=!1;b.complex=function(c){if(!arguments.length)return a;a=c;return b};return b},science.zeroes=function(a){var b=-1,c=[];if(arguments.length===1)while(++b<a)c[b]=0;else while(++b<a)c[b]=science.zeroes.apply(this,Array.prototype.slice.call(arguments,1));return c},science.vector={},science.vector.cross=function(a,b){return[a[1]*b[2]-a[2]*b[1],a[2]*b[0]-a[0]*b[2],a[0]*b[1]-a[1]*b[0]]},science.vector.dot=function(a,b){var c=0,d=-1,e=Math.min(a.length,b.length);while(++d<e)c+=a[d]*b[d];return c},science.vector.length=function(a){return Math.sqrt(science.vector.dot(a,a))},science.vector.normalize=function(a){var b=science.vector.length(a);return a.map(function(a){return a/b})},science.vector.determinant=function(a){var b=a[0].concat(a[1]).concat(a[2]).concat(a[3]);return b[12]*b[9]*b[6]*b[3]-b[8]*b[13]*b[6]*b[3]-b[12]*b[5]*b[10]*b[3]+b[4]*b[13]*b[10]*b[3]+b[8]*b[5]*b[14]*b[3]-b[4]*b[9]*b[14]*b[3]-b[12]*b[9]*b[2]*b[7]+b[8]*b[13]*b[2]*b[7]+b[12]*b[1]*b[10]*b[7]-b[0]*b[13]*b[10]*b[7]-b[8]*b[1]*b[14]*b[7]+b[0]*b[9]*b[14]*b[7]+b[12]*b[5]*b[2]*b[11]-b[4]*b[13]*b[2]*b[11]-b[12]*b[1]*b[6]*b[11]+b[0]*b[13]*b[6]*b[11]+b[4]*b[1]*b[14]*b[11]-b[0]*b[5]*b[14]*b[11]-b[8]*b[5]*b[2]*b[15]+b[4]*b[9]*b[2]*b[15]+b[8]*b[1]*b[6]*b[15]-b[0]*b[9]*b[6]*b[15]-b[4]*b[1]*b[10]*b[15]+b[0]*b[5]*b[10]*b[15]},science.vector.gaussjordan=function(a,b){b||(b=1e-10);var c=a.length,d=a[0].length,e=-1,f,g;while(++e<c){var h=e;f=e;while(++f<c)Math.abs(a[f][e])>Math.abs(a[h][e])&&(h=f);var i=a[e];a[e]=a[h],a[h]=i;if(Math.abs(a[e][e])<=b)return!1;f=e;while(++f<c){var j=a[f][e]/a[e][e];g=e-1;while(++g<d)a[f][g]-=a[e][g]*j}}e=c;while(--e>=0){var j=a[e][e];f=-1;while(++f<e){g=d;while(--g>=e)a[f][g]-=a[e][g]*a[f][e]/j}a[e][e]/=j,g=c-1;while(++g<d)a[e][g]/=j}return!0},science.vector.inverse=function(a){var b=a.length;i=-1;if(b===a[0].length){a=a.map(function(a,c){var d=Array(b),e=-1;while(++e<b)d[e]=c===e?1:0;return a.concat(d)}),science.vector.gaussjordan(a);while(++i<b)a[i]=a[i].slice(b);return a}},science.vector.multiply=function(a,b){var c=a.length,d=b[0].length,e=b.length,f=-1,g,h;if(e!==a[0].length)throw{error:"columns(a) != rows(b); "+a[0].length+" != "+e};var i=Array(c);while(++f<c){i[f]=Array(d),g=-1;while(++g<d){var j=0;h=-1;while(++h<e)j+=a[f][h]*b[h][g];i[f][g]=j}}return i},science.vector.transpose=function(a){var b=a.length,c=a[0].length,d=-1,e,f=Array(c);while(++d<c){f[d]=Array(b),e=-1;while(++e<b)f[d][e]=a[e][d]}return f}})()

data/lib/picky-statistics/application/javascripts/d3/lib/science/science.stats.js

@@ -1,720 +0,0 @@
-(function(){science.stats = {};
-// Bandwidth selectors for Gaussian kernels.
-// Based on R's implementations in `stats.bw`.
-science.stats.bandwidth = {
-
-  // Silverman, B. W. (1986) Density Estimation. London: Chapman and Hall.
-  nrd0: function(x) {
-    var hi = Math.sqrt(science.stats.variance(x));
-    if (!(lo = Math.min(hi, science.stats.iqr(x) / 1.34)))
-      (lo = hi) || (lo = Math.abs(x[1])) || (lo = 1);
-    return .9 * lo * Math.pow(x.length, -.2);
-  },
-
-  // Scott, D. W. (1992) Multivariate Density Estimation: Theory, Practice, and
-  // Visualization. Wiley.
-  nrd: function(x) {
-    var h = science.stats.iqr(x) / 1.34;
-    return 1.06 * Math.min(Math.sqrt(science.stats.variance(x)), h)
-      * Math.pow(x.length, -1/5);
-  }
-};
-science.stats.distance = {
-  euclidean: function(a, b) {
-    var n = a.length,
-        i = -1,
-        s = 0,
-        x;
-    while (++i < n) {
-      x = a[i] - b[i];
-      s += x * x;
-    }
-    return Math.sqrt(s);
-  },
-  manhattan: function(a, b) {
-    var n = a.length,
-        i = -1,
-        s = 0;
-    while (++i < n) s += Math.abs(a[i] - b[i]);
-    return s;
-  },
-  minkowski: function(p) {
-    return function(a, b) {
-      var n = a.length,
-          i = -1,
-          s = 0;
-      while (++i < n) s += Math.pow(Math.abs(a[i] - b[i]), p);
-      return Math.pow(s, 1 / p);
-    };
-  },
-  chebyshev: function(a, b) {
-    var n = a.length,
-        i = -1,
-        max = 0,
-        x;
-    while (++i < n) {
-      x = Math.abs(a[i] - b[i]);
-      if (x > max) max = x;
-    }
-    return max;
-  },
-  hamming: function(a, b) {
-    var n = a.length,
-        i = -1,
-        d = 0;
-    while (++i < n) if (a[i] !== b[i]) d++;
-    return d;
-  },
-  jaccard: function(a, b) {
-    var n = a.length,
-        i = -1,
-        s = 0;
-    while (++i < n) if (a[i] === b[i]) s++;
-    return s / n;
-  },
-  braycurtis: function(a, b) {
-    var n = a.length,
-        i = -1,
-        s0 = 0,
-        s1 = 0,
-        ai,
-        bi;
-    while (++i < n) {
-      ai = a[i];
-      bi = b[i];
-      s0 += Math.abs(ai - bi);
-      s1 += Math.abs(ai + bi);
-    }
-    return s0 / s1;
-  }
-};
-// Based on implementation in http://picomath.org/.
-science.stats.erf = function(x) {
-  var a1 =  0.254829592,
-      a2 = -0.284496736,
-      a3 =  1.421413741,
-      a4 = -1.453152027,
-      a5 =  1.061405429,
-      p  =  0.3275911;
-
-  // Save the sign of x
-  var sign = x < 0 ? -1 : 1;
-  if (x < 0) {
-    sign = -1;
-    x = -x;
-  }
-
-  // A&S formula 7.1.26
-  var t = 1 / (1 + p * x);
-  return sign * (
-    1 - (((((a5 * t + a4) * t) + a3) * t + a2) * t + a1)
-    * t * Math.exp(-x * x));
-};
-science.stats.phi = function(x) {
-  return .5 * (1 + science.stats.erf(x / Math.SQRT2));
-};
-// See <http://en.wikipedia.org/wiki/Kernel_(statistics)>.
-science.stats.kernel = {
-  uniform: function(u) {
-    if (u <= 1 && u >= -1) return .5;
-    return 0;
-  },
-  triangular: function(u) {
-    if (u <= 1 && u >= -1) return 1 - Math.abs(u);
-    return 0;
-  },
-  epanechnikov: function(u) {
-    if (u <= 1 && u >= -1) return .75 * (1 - u * u);
-    return 0;
-  },
-  quartic: function(u) {
-    if (u <= 1 && u >= -1) {
-      var tmp = 1 - u * u;
-      return (15 / 16) * tmp * tmp;
-    }
-    return 0;
-  },
-  triweight: function(u) {
-    if (u <= 1 && u >= -1) {
-      var tmp = 1 - u * u;
-      return (35 / 32) * tmp * tmp * tmp;
-    }
-    return 0;
-  },
-  gaussian: function(u) {
-    return 1 / Math.sqrt(2 * Math.PI) * Math.exp(-.5 * u * u);
-  },
-  cosine: function(u) {
-    if (u <= 1 && u >= -1) return Math.PI / 4 * Math.cos(Math.PI / 2 * u);
-    return 0;
-  }
-};
-// http://exploringdata.net/den_trac.htm
-science.stats.kde = function() {
-  var kernel = science.stats.kernel.gaussian,
-      sample = [],
-      bandwidth = science.stats.bandwidth.nrd;
-
-  function kde(points, i) {
-    var bw = bandwidth.call(this, sample);
-    return points.map(function(x) {
-      var i = -1,
-          y = 0,
-          n = sample.length;
-      while (++i < n) {
-        y += kernel((x - sample[i]) / bw);
-      }
-      return [x, y / bw / n];
-    });
-  }
-
-  kde.kernel = function(x) {
-    if (!arguments.length) return kernel;
-    kernel = x;
-    return kde;
-  };
-
-  kde.sample = function(x) {
-    if (!arguments.length) return sample;
-    sample = x;
-    return kde;
-  };
-
-  kde.bandwidth = function(x) {
-    if (!arguments.length) return bandwidth;
-    bandwidth = science.functor(x);
-    return kde;
-  };
-
-  return kde;
-};
-// Based on figue implementation by Jean-Yves Delort.
-// http://code.google.com/p/figue/
-science.stats.kmeans = function() {
-  var distance = science.stats.distance.euclidean,
-      maxIterations = 1000,
-      k = 1;
-
-  function kmeans(vectors) {
-    var n = vectors.length,
-        assignments = [],
-        clusterSizes = [],
-        repeat = 1,
-        iterations = 0,
-        centroids = science_stats_kmeansRandom(k, vectors),
-        newCentroids,
-        i,
-        j,
-        x,
-        d,
-        min,
-        best;
-
-    while (repeat && iterations < maxIterations) {
-      // Assignment step.
-      j = -1; while (++j < k) {
-        clusterSizes[j] = 0;
-      }
-
-      i = -1; while (++i < n) {
-        x = vectors[i];
-        min = Infinity;
-        j = -1; while (++j < k) {
-          d = distance.call(this, centroids[j], x);
-          if (d < min) {
-            min = d;
-            best = j;
-          }
-        }
-        clusterSizes[assignments[i] = best]++;
-      }
-
-      // Update centroids step.
-      newCentroids = [];
-      i = -1; while (++i < n) {
-        x = assignments[i];
-        d = newCentroids[x];
-        if (d == null) newCentroids[x] = vectors[i].slice();
-        else {
-          j = -1; while (++j < d.length) {
-            d[j] += vectors[i][j];
-          }
-        }
-      }
-      j = -1; while (++j < k) {
-        x = newCentroids[j];
-        d = 1 / clusterSizes[j];
-        i = -1; while (++i < x.length) x[i] *= d;
-      }
-
-      // Check convergence.
-      repeat = 0;
-      j = -1; while (++j < k) {
-        if (!science_stats_kmeansCompare(newCentroids[j], centroids[j])) {
-          repeat = 1;
-          break;
-        }
-      }
-      centroids = newCentroids;
-      iterations++;
-    }
-    return {assignments: assignments, centroids: centroids};
-  }
-
-  kmeans.k = function(x) {
-    if (!arguments.length) return k;
-    k = x;
-    return kmeans;
-  };
-
-  kmeans.distance = function(x) {
-    if (!arguments.length) return distance;
-    distance = x;
-    return kmeans;
-  };
-
-  return kmeans;
-};
-
-function science_stats_kmeansCompare(a, b) {
-  if (!a || !b || a.length !== b.length) return false;
-  var n = a.length,
-      i = -1;
-  while (++i < n) if (a[i] !== b[i]) return false;
-  return true;
-}
-
-// Returns an array of k distinct vectors randomly selected from the input
-// array of vectors. Returns null if k > n or if there are less than k distinct
-// objects in vectors.
-function science_stats_kmeansRandom(k, vectors) {
-  var n = vectors.length;
-  if (k > n) return null;
-  
-  var selected_vectors = [];
-  var selected_indices = [];
-  var tested_indices = {};
-  var tested = 0;
-  var selected = 0;
-  var i,
-      vector,
-      select;
-
-  while (selected < k) {
-    if (tested === n) return null;
-    
-    var random_index = Math.floor(Math.random() * n);
-    if (random_index in tested_indices) continue;
-    
-    tested_indices[random_index] = 1;
-    tested++;
-    vector = vectors[random_index];
-    select = true;
-    for (i = 0; i < selected; i++) {
-      if (science_stats_kmeansCompare(vector, selected_vectors[i])) {
-        select = false;
-        break;
-      }
-    }
-    if (select) {
-      selected_vectors[selected] = vector;
-      selected_indices[selected] = random_index;
-      selected++;
-    }
-  }
-  return selected_vectors;
-}
-science.stats.hcluster = function() {
-  var distance = science.stats.distance.euclidean,
-      linkage = "simple"; // simple, complete or average
-
-  function hcluster(vectors) {
-    var n = vectors.length,
-        dMin = [],
-        cSize = [],
-        distMatrix = [],
-        clusters = [],
-        c1,
-        c2,
-        c1Cluster,
-        c2Cluster,
-        p,
-        root,
-        i,
-        j;
-
-    // Initialise distance matrix and vector of closest clusters.
-    i = -1; while (++i < n) {
-      dMin[i] = 0;
-      distMatrix[i] = [];
-      j = -1; while (++j < n) {
-        distMatrix[i][j] = i === j ? Infinity : distance(vectors[i] , vectors[j]);
-        if (distMatrix[i][dMin[i]] > distMatrix[i][j]) dMin[i] = j;
-      }
-    }
-
-    // create leaves of the tree
-    i = -1; while (++i < n) {
-      clusters[i] = [];
-      clusters[i][0] = {
-        left: null,
-        right: null,
-        dist: 0,
-        centroid: vectors[i],
-        size: 1,
-        depth: 0
-      };
-      cSize[i] = 1;
-    }
-
-    // Main loop
-    for (p = 0; p < n-1; p++) {
-      // find the closest pair of clusters
-      c1 = 0;
-      for (i = 0; i < n; i++) {
-        if (distMatrix[i][dMin[i]] < distMatrix[c1][dMin[c1]]) c1 = i;
-      }
-      c2 = dMin[c1];
-
-      // create node to store cluster info 
-      c1Cluster = clusters[c1][0];
-      c2Cluster = clusters[c2][0];
-
-      newCluster = {
-        left: c1Cluster,
-        right: c2Cluster,
-        dist: distMatrix[c1][c2],
-        centroid: calculateCentroid(c1Cluster.size, c1Cluster.centroid,
-          c2Cluster.size, c2Cluster.centroid),
-        size: c1Cluster.size + c2Cluster.size,
-        depth: 1 + Math.max(c1Cluster.depth, c2Cluster.depth)
-      };
-      clusters[c1].splice(0, 0, newCluster);
-      cSize[c1] += cSize[c2];
-
-      // overwrite row c1 with respect to the linkage type
-      for (j = 0; j < n; j++) {
-        switch (linkage) {
-          case "single":
-            if (distMatrix[c1][j] > distMatrix[c2][j])
-              distMatrix[j][c1] = distMatrix[c1][j] = distMatrix[c2][j];
-            break;
-          case "complete":
-            if (distMatrix[c1][j] < distMatrix[c2][j])
-              distMatrix[j][c1] = distMatrix[c1][j] = distMatrix[c2][j];
-            break;
-          case "average":
-            distMatrix[j][c1] = distMatrix[c1][j] = (cSize[c1] * distMatrix[c1][j] + cSize[c2] * distMatrix[c2][j]) / (cSize[c1] + cSize[j]);
-            break;
-        }
-      }
-      distMatrix[c1][c1] = Infinity;
-
-      // infinity ­out old row c2 and column c2
-      for (i = 0; i < n; i++)
-        distMatrix[i][c2] = distMatrix[c2][i] = Infinity;
-
-      // update dmin and replace ones that previous pointed to c2 to point to c1
-      for (j = 0; j < n; j++) {
-        if (dMin[j] == c2) dMin[j] = c1;
-        if (distMatrix[c1][j] < distMatrix[c1][dMin[c1]]) dMin[c1] = j;
-      }
-
-      // keep track of the last added cluster
-      root = newCluster;
-    }
-
-    return root;
-  }
-
-  hcluster.distance = function(x) {
-    if (!arguments.length) return distance;
-    distance = x;
-    return hcluster;
-  };
-
-  return hcluster;
-};
-
-function calculateCentroid(c1Size, c1Centroid, c2Size, c2Centroid) {
-  var newCentroid = [],
-      newSize = c1Size + c2Size,
-      n = c1Centroid.length,
-      i = -1;
-  while (++i < n) {
-    newCentroid[i] = (c1Size * c1Centroid[i] + c2Size * c2Centroid[i]) / newSize;
-  }
-  return newCentroid;
-}
-science.stats.iqr = function(x) {
-  var quartiles = science.stats.quantiles(x, [.25, .75]);
-  return quartiles[1] - quartiles[0];
-};
-// Based on org.apache.commons.math.analysis.interpolation.LoessInterpolator
-// from http://commons.apache.org/math/
-science.stats.loess = function() {    
-  var bandwidth = .3,
-      robustnessIters = 2,
-      accuracy = 1e-12;
-
-  function smooth(xval, yval, weights) {
-    var n = xval.length,
-        i;
-
-    if (n !== yval.length) throw {error: "Mismatched array lengths"};
-    if (n == 0) throw {error: "At least one point required."};
-
-    if (arguments.length < 3) {
-      weights = [];
-      i = -1; while (++i < n) weights[i] = 1;
-    }
-
-    science_stats_loessFiniteReal(xval);
-    science_stats_loessFiniteReal(yval);
-    science_stats_loessFiniteReal(weights);
-    science_stats_loessStrictlyIncreasing(xval);
-
-    if (n == 1) return [yval[0]];
-    if (n == 2) return [yval[0], yval[1]];
-
-    var bandwidthInPoints = Math.floor(bandwidth * n);
-
-    if (bandwidthInPoints < 2) throw {error: "Bandwidth too small."};
-
-    var res = [],
-        residuals = [],
-        robustnessWeights = [];
-
-    // Do an initial fit and 'robustnessIters' robustness iterations.
-    // This is equivalent to doing 'robustnessIters+1' robustness iterations
-    // starting with all robustness weights set to 1.
-    i = -1; while (++i < n) {
-      res[i] = 0;
-      residuals[i] = 0;
-      robustnessWeights[i] = 1;
-    }
-
-    var iter = -1;
-    while (++iter <= robustnessIters) {
-      var bandwidthInterval = [0, bandwidthInPoints - 1];
-      // At each x, compute a local weighted linear regression
-      var x;
-      i = -1; while (++i < n) {
-        x = xval[i];
-
-        // Find out the interval of source points on which
-        // a regression is to be made.
-        if (i > 0) {
-          science_stats_loessUpdateBandwidthInterval(xval, weights, i, bandwidthInterval);
-        }
-
-        var ileft = bandwidthInterval[0],
-            iright = bandwidthInterval[1];
-
-        // Compute the point of the bandwidth interval that is
-        // farthest from x
-        var edge = (xval[i] - xval[ileft]) > (xval[iright] - xval[i]) ? ileft : iright;
-
-        // Compute a least-squares linear fit weighted by
-        // the product of robustness weights and the tricube
-        // weight function.
-        // See http://en.wikipedia.org/wiki/Linear_regression
-        // (section "Univariate linear case")
-        // and http://en.wikipedia.org/wiki/Weighted_least_squares
-        // (section "Weighted least squares")
-        var sumWeights = 0,
-            sumX = 0,
-            sumXSquared = 0,
-            sumY = 0,
-            sumXY = 0,
-            denom = Math.abs(1 / (xval[edge] - x));
-
-        for (var k = ileft; k <= iright; ++k) {
-          var xk   = xval[k],
-              yk   = yval[k],
-              dist = k < i ? x - xk : xk - x,
-              w    = science_stats_loessTricube(dist * denom) * robustnessWeights[k] * weights[k],
-              xkw  = xk * w;
-          sumWeights += w;
-          sumX += xkw;
-          sumXSquared += xk * xkw;
-          sumY += yk * w;
-          sumXY += yk * xkw;
-        }
-
-        var meanX = sumX / sumWeights,
-            meanY = sumY / sumWeights,
-            meanXY = sumXY / sumWeights,
-            meanXSquared = sumXSquared / sumWeights;
-
-        var beta = (Math.sqrt(Math.abs(meanXSquared - meanX * meanX)) < accuracy)
-            ? 0 : ((meanXY - meanX * meanY) / (meanXSquared - meanX * meanX));
-
-        var alpha = meanY - beta * meanX;
-
-        res[i] = beta * x + alpha;
-        residuals[i] = Math.abs(yval[i] - res[i]);
-      }
-
-      // No need to recompute the robustness weights at the last
-      // iteration, they won't be needed anymore
-      if (iter === robustnessIters) {
-        break;
-      }
-
-      // Recompute the robustness weights.
-
-      // Find the median residual.
-      var sortedResiduals = residuals.slice();
-      sortedResiduals.sort();
-      var medianResidual = sortedResiduals[Math.floor(n / 2)];
-
-      if (Math.abs(medianResidual) < accuracy)
-        break;
-
-      var arg,
-          w;
-      i = -1; while (++i < n) {
-        arg = residuals[i] / (6 * medianResidual);
-        robustnessWeights[i] = (arg >= 1) ? 0 : ((w = 1 - arg * arg) * w);
-      }
-    }
-
-    return res;
-  }
-
-  smooth.bandwidth = function(x) {
-    if (!arguments.length) return x;
-    bandwidth = x;
-    return smooth;
-  };
-
-  smooth.robustnessIterations = function(x) {
-    if (!arguments.length) return x;
-    robustnessIters = x;
-    return smooth;
-  };
-
-  smooth.accuracy = function(x) {
-    if (!arguments.length) return x;
-    accuracy = x;
-    return smooth;
-  };
-
-  return smooth;
-};
-
-function science_stats_loessFiniteReal(values) {
-  var n = values.length,
-      i = -1;
-
-  while (++i < n) if (!isFinite(values[i])) return false;
-
-  return true;
-}
-
-function science_stats_loessStrictlyIncreasing(xval) {
-  var n = xval.length,
-      i = 0;
-
-  while (++i < n) if (xval[i - 1] >= xval[i]) return false;
-
-  return true;
-}
-
-// Compute the tricube weight function.
-// http://en.wikipedia.org/wiki/Local_regression#Weight_function
-function science_stats_loessTricube(x) {
-  return (x = 1 - x * x * x) * x * x;
-}
-
-// Given an index interval into xval that embraces a certain number of
-// points closest to xval[i-1], update the interval so that it embraces
-// the same number of points closest to xval[i], ignoring zero weights.
-function science_stats_loessUpdateBandwidthInterval(
-  xval, weights, i, bandwidthInterval) {
-
-  var left = bandwidthInterval[0],
-      right = bandwidthInterval[1];
-
-  // The right edge should be adjusted if the next point to the right
-  // is closer to xval[i] than the leftmost point of the current interval
-  var nextRight = science_stats_loessNextNonzero(weights, right);
-  if ((nextRight < xval.length) && (xval[nextRight] - xval[i]) < (xval[i] - xval[left])) {
-    var nextLeft = science_stats_loessNextNonzero(weights, left);
-    bandwidthInterval[0] = nextLeft;
-    bandwidthInterval[1] = nextRight;
-  }
-}
-
-function science_stats_loessNextNonzero(weights, i) {
-  var j = i + 1;
-  while (j < weights.length && weights[j] === 0) j++;
-  return j;
-}
-// Welford's algorithm.
-science.stats.mean = function(x) {
-  var n = x.length;
-  if (n === 0) return NaN;
-  var m = 0,
-      i = -1;
-  while (++i < n) m += (x[i] - m) / (i + 1);
-  return m;
-};
-science.stats.median = function(x) {
-  return science.stats.quantiles(x, [.5])[0];
-};
-science.stats.mode = function(x) {
-  x = x.slice().sort(science.ascending);
-  var mode,
-      n = x.length,
-      i = -1,
-      l = i,
-      last = null,
-      max = 0,
-      tmp,
-      v;
-  while (++i < n) {
-    if ((v = x[i]) !== last) {
-      if ((tmp = i - l) > max) {
-        max = tmp;
-        mode = last;
-      }
-      last = v;
-      l = i;
-    }
-  }
-  return mode;
-};
-// Uses R's quantile algorithm type=7.
-science.stats.quantiles = function(d, quantiles) {
-  d = d.slice().sort(science.ascending);
-  var n_1 = d.length - 1;
-  return quantiles.map(function(q) {
-    if (q === 0) return d[0];
-    else if (q === 1) return d[n_1];
-
-    var index = 1 + q * n_1,
-        lo = Math.floor(index),
-        h = index - lo,
-        a = d[lo - 1];
-
-    return h === 0 ? a : a + h * (d[lo] - a);
-  });
-};
-// Unbiased estimate of a sample's variance.
-// Also known as the sample variance, where the denominator is n - 1.
-science.stats.variance = function(x) {
-  var n = x.length;
-  if (n < 1) return NaN;
-  if (n === 1) return 0;
-  var mean = science.stats.mean(x),
-      i = -1,
-      s = 0;
-  while (++i < n) {
-    var v = x[i] - mean;
-    s += v * v;
-  }
-  return s / (n - 1);
-};
-})()