pharmaobservatory 0.1.5 → 0.1.6

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (307) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +114 -7
  3. data/docs/BiomarkerAssayEvidenceResponse.md +58 -0
  4. data/docs/{BiomarkerCdxAssertionsResponseBuild.md → BiomarkerAssayEvidenceResponseBuild.md} +2 -2
  5. data/docs/{BiomarkerCdxAssertionsResponseFreshness.md → BiomarkerAssayEvidenceResponseFreshness.md} +2 -2
  6. data/docs/{BiomarkerCdxAssertionsResponseScope.md → BiomarkerAssayEvidenceResponseScope.md} +2 -2
  7. data/docs/BiomarkerAssayEvidenceRow.md +68 -0
  8. data/docs/BiomarkerAssayWhitespaceResponse.md +58 -0
  9. data/docs/BiomarkerAssayWhitespaceRow.md +66 -0
  10. data/docs/BiomarkerBqpAssertionsResponse.md +3 -3
  11. data/docs/BiomarkerCdxAssertionsResponse.md +3 -3
  12. data/docs/BiomarkerEvidenceResponse.md +3 -3
  13. data/docs/BiomarkerLiteratureResponse.md +3 -3
  14. data/docs/BiomarkerPublishingCompaniesResponse.md +3 -3
  15. data/docs/BiomarkerPublishingCompaniesRow.md +9 -1
  16. data/docs/BiomarkerRelationsResponse.md +3 -3
  17. data/docs/BiomarkerSampleCoverageResponse.md +3 -3
  18. data/docs/BiomarkerSamplePrevalenceResponse.md +3 -3
  19. data/docs/BiomarkerValidationResponse.md +3 -3
  20. data/docs/BiomarkerVariantMentionsResponse.md +3 -3
  21. data/docs/BiomarkersApi.md +160 -0
  22. data/docs/BiomarkersRecord.md +2 -2
  23. data/docs/BiomarkersResponse.md +3 -3
  24. data/docs/BiomarkersRow.md +2 -0
  25. data/docs/CellLinesRecord.md +2 -2
  26. data/docs/CellLinesResponse.md +3 -3
  27. data/docs/CompaniesApi.md +246 -0
  28. data/docs/CompaniesRecord.md +2 -2
  29. data/docs/CompaniesResponse.md +3 -3
  30. data/docs/CompaniesRow.md +1 -1
  31. data/docs/CompanyAssetsResponse.md +3 -3
  32. data/docs/CompanyFundingEventsResponse.md +3 -3
  33. data/docs/CompanyFundingEventsRow.md +1 -1
  34. data/docs/CompanyFundingSummaryResponse.md +3 -3
  35. data/docs/CompanyMembersResponse.md +3 -3
  36. data/docs/CompanyProgramsResponse.md +3 -3
  37. data/docs/CompanyTargetsResponse.md +3 -3
  38. data/docs/CompanyTargetsRow.md +5 -1
  39. data/docs/ConditionAdverseEventsResponse.md +3 -3
  40. data/docs/ConditionBurdenResponse.md +3 -3
  41. data/docs/ConditionDeliveryResponse.md +3 -3
  42. data/docs/ConditionDrugsResponse.md +3 -3
  43. data/docs/ConditionPrevalenceResponse.md +3 -3
  44. data/docs/ConditionPrevalenceRow.md +1 -1
  45. data/docs/ConditionPublicationsResponse.md +3 -3
  46. data/docs/ConditionRecruitmentByPhaseResponse.md +58 -0
  47. data/docs/ConditionRecruitmentByPhaseRow.md +50 -0
  48. data/docs/ConditionRecruitmentDurationResponse.md +58 -0
  49. data/docs/ConditionRecruitmentDurationRow.md +86 -0
  50. data/docs/ConditionSitesResponse.md +3 -3
  51. data/docs/ConditionTrialStartForecastResponse.md +58 -0
  52. data/docs/ConditionTrialStartForecastRow.md +70 -0
  53. data/docs/ConditionTrialsResponse.md +3 -3
  54. data/docs/ConditionTrialsRow.md +1 -1
  55. data/docs/ConditionsApi.md +240 -0
  56. data/docs/ConditionsRecord.md +2 -2
  57. data/docs/ConditionsRecordAttributes.md +3 -1
  58. data/docs/ConditionsResponse.md +3 -3
  59. data/docs/DrugPatentCliffResponse.md +3 -3
  60. data/docs/InstitutionalHoldingsResponse.md +3 -3
  61. data/docs/InstitutionalHoldingsRow.md +7 -1
  62. data/docs/InvestorFundsResponse.md +58 -0
  63. data/docs/InvestorFundsRow.md +24 -0
  64. data/docs/InvestorPortfolioResponse.md +58 -0
  65. data/docs/InvestorPortfolioRow.md +42 -0
  66. data/docs/InvestorPrivateFundsResponse.md +58 -0
  67. data/docs/InvestorPrivateFundsRow.md +44 -0
  68. data/docs/InvestorsApi.md +633 -0
  69. data/docs/InvestorsRecord.md +38 -0
  70. data/docs/InvestorsResponse.md +58 -0
  71. data/docs/InvestorsRow.md +54 -0
  72. data/docs/LegalEntitiesApi.md +240 -0
  73. data/docs/LegalEntitiesRecord.md +2 -2
  74. data/docs/LegalEntitiesResponse.md +3 -3
  75. data/docs/LegalEntitiesRow.md +1 -1
  76. data/docs/ManagersApi.md +233 -0
  77. data/docs/ManagersRecord.md +38 -0
  78. data/docs/ManagersResponse.md +58 -0
  79. data/docs/ManagersRow.md +46 -0
  80. data/docs/OrgDisclosuresResponse.md +58 -0
  81. data/docs/OrgDisclosuresRow.md +56 -0
  82. data/docs/OrgRelationshipsResponse.md +58 -0
  83. data/docs/OrgRelationshipsRow.md +68 -0
  84. data/docs/OwnershipPositionsResponse.md +3 -3
  85. data/docs/OwnershipPositionsRow.md +16 -14
  86. data/docs/PdufaDatesResponse.md +3 -3
  87. data/docs/SiteBedsYearlyResponse.md +3 -3
  88. data/docs/SiteCroTrialsResponse.md +3 -3
  89. data/docs/SiteHospitalsResponse.md +3 -3
  90. data/docs/SiteInvestigatorsResponse.md +3 -3
  91. data/docs/SiteTrialConditionsResponse.md +3 -3
  92. data/docs/SiteTrialDrugsResponse.md +3 -3
  93. data/docs/SiteTrialsResponse.md +3 -3
  94. data/docs/SitesRecord.md +2 -2
  95. data/docs/SitesResponse.md +3 -3
  96. data/docs/SponsorRecruitmentByPhaseResponse.md +3 -3
  97. data/docs/SponsorRecruitmentDurationResponse.md +3 -3
  98. data/docs/SponsorTrialStartForecastResponse.md +3 -3
  99. data/docs/SponsorTrialsResponse.md +3 -3
  100. data/docs/SponsorTrialsRow.md +1 -1
  101. data/docs/SupplierCapabilityEsgResponse.md +58 -0
  102. data/docs/SupplierCapabilityEsgRow.md +64 -0
  103. data/docs/SupplierServicesResponse.md +58 -0
  104. data/docs/SupplierServicesRow.md +30 -0
  105. data/docs/SupplierSitesResponse.md +58 -0
  106. data/docs/SupplierSitesRow.md +42 -0
  107. data/docs/SuppliersApi.md +313 -0
  108. data/docs/SuppliersRecord.md +38 -0
  109. data/docs/SuppliersResponse.md +58 -0
  110. data/docs/SuppliersRow.md +76 -0
  111. data/docs/TargetAssociationsResponse.md +58 -0
  112. data/docs/TargetAssociationsRow.md +26 -0
  113. data/docs/TargetCrowdingResponse.md +58 -0
  114. data/docs/TargetCrowdingRow.md +30 -0
  115. data/docs/TargetDrugsResponse.md +58 -0
  116. data/docs/TargetDrugsRow.md +38 -0
  117. data/docs/TargetEvidenceResponse.md +58 -0
  118. data/docs/TargetEvidenceRow.md +52 -0
  119. data/docs/TargetPatentMentionsResponse.md +58 -0
  120. data/docs/TargetPatentMentionsRow.md +34 -0
  121. data/docs/TargetProgramsResponse.md +58 -0
  122. data/docs/TargetProgramsRow.md +58 -0
  123. data/docs/TargetPublicationsResponse.md +58 -0
  124. data/docs/TargetPublicationsRow.md +32 -0
  125. data/docs/TargetRegulatoryPrecedentResponse.md +58 -0
  126. data/docs/TargetRegulatoryPrecedentRow.md +38 -0
  127. data/docs/TargetTrialsResponse.md +58 -0
  128. data/docs/TargetTrialsRow.md +46 -0
  129. data/docs/TargetsApi.md +1033 -0
  130. data/docs/TargetsRecord.md +38 -0
  131. data/docs/TargetsResponse.md +58 -0
  132. data/docs/TargetsRow.md +68 -0
  133. data/docs/TrialAdverseEventsResponse.md +3 -3
  134. data/docs/TrialChangesResponse.md +3 -3
  135. data/docs/TrialDeliveryResponse.md +3 -3
  136. data/docs/TrialDemographicsResponse.md +3 -3
  137. data/docs/TrialDrugClassesResponse.md +58 -0
  138. data/docs/TrialDrugClassesRow.md +28 -0
  139. data/docs/TrialDrugsResponse.md +3 -3
  140. data/docs/TrialEnrollmentHistoryResponse.md +3 -3
  141. data/docs/TrialEnrollmentRateResponse.md +3 -3
  142. data/docs/TrialExtractedEndpointsResponse.md +3 -3
  143. data/docs/TrialKolsResponse.md +58 -0
  144. data/docs/TrialKolsRow.md +32 -0
  145. data/docs/TrialOutcomeMeasuresResponse.md +3 -3
  146. data/docs/TrialResearchPaymentsResponse.md +58 -0
  147. data/docs/TrialResearchPaymentsRow.md +44 -0
  148. data/docs/TrialSiteHistoryResponse.md +58 -0
  149. data/docs/TrialSiteHistoryRow.md +50 -0
  150. data/docs/TrialSitesResponse.md +3 -3
  151. data/docs/TrialsApi.md +320 -0
  152. data/docs/TrialsRecord.md +2 -2
  153. data/docs/TrialsResponse.md +3 -3
  154. data/lib/pharmaobservatory/api/biomarkers_api.rb +168 -0
  155. data/lib/pharmaobservatory/api/companies_api.rb +273 -0
  156. data/lib/pharmaobservatory/api/conditions_api.rb +252 -0
  157. data/lib/pharmaobservatory/api/investors_api.rb +665 -0
  158. data/lib/pharmaobservatory/api/legal_entities_api.rb +252 -0
  159. data/lib/pharmaobservatory/api/managers_api.rb +245 -0
  160. data/lib/pharmaobservatory/api/suppliers_api.rb +329 -0
  161. data/lib/pharmaobservatory/api/targets_api.rb +1085 -0
  162. data/lib/pharmaobservatory/api/trials_api.rb +336 -0
  163. data/lib/pharmaobservatory/models/biomarker_assay_evidence_response.rb +478 -0
  164. data/lib/pharmaobservatory/models/{biomarker_cdx_assertions_response_build.rb → biomarker_assay_evidence_response_build.rb} +3 -3
  165. data/lib/pharmaobservatory/models/{biomarker_cdx_assertions_response_freshness.rb → biomarker_assay_evidence_response_freshness.rb} +3 -3
  166. data/lib/pharmaobservatory/models/{biomarker_cdx_assertions_response_scope.rb → biomarker_assay_evidence_response_scope.rb} +3 -3
  167. data/lib/pharmaobservatory/models/biomarker_assay_evidence_row.rb +506 -0
  168. data/lib/pharmaobservatory/models/biomarker_assay_whitespace_response.rb +478 -0
  169. data/lib/pharmaobservatory/models/biomarker_assay_whitespace_row.rb +499 -0
  170. data/lib/pharmaobservatory/models/biomarker_bqp_assertions_response.rb +3 -3
  171. data/lib/pharmaobservatory/models/biomarker_cdx_assertions_response.rb +3 -3
  172. data/lib/pharmaobservatory/models/biomarker_evidence_response.rb +3 -3
  173. data/lib/pharmaobservatory/models/biomarker_literature_response.rb +3 -3
  174. data/lib/pharmaobservatory/models/biomarker_publishing_companies_response.rb +3 -3
  175. data/lib/pharmaobservatory/models/biomarker_publishing_companies_row.rb +49 -5
  176. data/lib/pharmaobservatory/models/biomarker_relations_response.rb +3 -3
  177. data/lib/pharmaobservatory/models/biomarker_sample_coverage_response.rb +3 -3
  178. data/lib/pharmaobservatory/models/biomarker_sample_prevalence_response.rb +3 -3
  179. data/lib/pharmaobservatory/models/biomarker_validation_response.rb +3 -3
  180. data/lib/pharmaobservatory/models/biomarker_variant_mentions_response.rb +3 -3
  181. data/lib/pharmaobservatory/models/biomarkers_record.rb +2 -2
  182. data/lib/pharmaobservatory/models/biomarkers_response.rb +3 -3
  183. data/lib/pharmaobservatory/models/biomarkers_row.rb +12 -1
  184. data/lib/pharmaobservatory/models/cell_lines_record.rb +2 -2
  185. data/lib/pharmaobservatory/models/cell_lines_response.rb +3 -3
  186. data/lib/pharmaobservatory/models/companies_record.rb +2 -2
  187. data/lib/pharmaobservatory/models/companies_response.rb +3 -3
  188. data/lib/pharmaobservatory/models/companies_row.rb +1 -1
  189. data/lib/pharmaobservatory/models/company_assets_response.rb +3 -3
  190. data/lib/pharmaobservatory/models/company_funding_events_response.rb +3 -3
  191. data/lib/pharmaobservatory/models/company_funding_events_row.rb +1 -1
  192. data/lib/pharmaobservatory/models/company_funding_summary_response.rb +3 -3
  193. data/lib/pharmaobservatory/models/company_members_response.rb +3 -3
  194. data/lib/pharmaobservatory/models/company_programs_response.rb +3 -3
  195. data/lib/pharmaobservatory/models/company_targets_response.rb +3 -3
  196. data/lib/pharmaobservatory/models/company_targets_row.rb +27 -5
  197. data/lib/pharmaobservatory/models/condition_adverse_events_response.rb +3 -3
  198. data/lib/pharmaobservatory/models/condition_burden_response.rb +3 -3
  199. data/lib/pharmaobservatory/models/condition_delivery_response.rb +3 -3
  200. data/lib/pharmaobservatory/models/condition_drugs_response.rb +3 -3
  201. data/lib/pharmaobservatory/models/condition_prevalence_response.rb +3 -3
  202. data/lib/pharmaobservatory/models/condition_prevalence_row.rb +1 -1
  203. data/lib/pharmaobservatory/models/condition_publications_response.rb +3 -3
  204. data/lib/pharmaobservatory/models/condition_recruitment_by_phase_response.rb +478 -0
  205. data/lib/pharmaobservatory/models/condition_recruitment_by_phase_row.rb +399 -0
  206. data/lib/pharmaobservatory/models/condition_recruitment_duration_response.rb +478 -0
  207. data/lib/pharmaobservatory/models/condition_recruitment_duration_row.rb +597 -0
  208. data/lib/pharmaobservatory/models/condition_sites_response.rb +3 -3
  209. data/lib/pharmaobservatory/models/condition_trial_start_forecast_response.rb +478 -0
  210. data/lib/pharmaobservatory/models/condition_trial_start_forecast_row.rb +509 -0
  211. data/lib/pharmaobservatory/models/condition_trials_response.rb +3 -3
  212. data/lib/pharmaobservatory/models/condition_trials_row.rb +1 -1
  213. data/lib/pharmaobservatory/models/conditions_record.rb +2 -2
  214. data/lib/pharmaobservatory/models/conditions_record_attributes.rb +13 -4
  215. data/lib/pharmaobservatory/models/conditions_response.rb +3 -3
  216. data/lib/pharmaobservatory/models/drug_patent_cliff_response.rb +3 -3
  217. data/lib/pharmaobservatory/models/institutional_holdings_response.rb +3 -3
  218. data/lib/pharmaobservatory/models/institutional_holdings_row.rb +35 -2
  219. data/lib/pharmaobservatory/models/investor_funds_response.rb +478 -0
  220. data/lib/pharmaobservatory/models/investor_funds_row.rb +256 -0
  221. data/lib/pharmaobservatory/models/investor_portfolio_response.rb +478 -0
  222. data/lib/pharmaobservatory/models/investor_portfolio_row.rb +357 -0
  223. data/lib/pharmaobservatory/models/investor_private_funds_response.rb +478 -0
  224. data/lib/pharmaobservatory/models/investor_private_funds_row.rb +366 -0
  225. data/lib/pharmaobservatory/models/investors_record.rb +385 -0
  226. data/lib/pharmaobservatory/models/investors_response.rb +478 -0
  227. data/lib/pharmaobservatory/models/investors_row.rb +421 -0
  228. data/lib/pharmaobservatory/models/legal_entities_record.rb +2 -2
  229. data/lib/pharmaobservatory/models/legal_entities_response.rb +3 -3
  230. data/lib/pharmaobservatory/models/legal_entities_row.rb +1 -1
  231. data/lib/pharmaobservatory/models/managers_record.rb +385 -0
  232. data/lib/pharmaobservatory/models/managers_response.rb +478 -0
  233. data/lib/pharmaobservatory/models/managers_row.rb +377 -0
  234. data/lib/pharmaobservatory/models/org_disclosures_response.rb +478 -0
  235. data/lib/pharmaobservatory/models/org_disclosures_row.rb +432 -0
  236. data/lib/pharmaobservatory/models/org_relationships_response.rb +478 -0
  237. data/lib/pharmaobservatory/models/org_relationships_row.rb +498 -0
  238. data/lib/pharmaobservatory/models/ownership_positions_response.rb +3 -3
  239. data/lib/pharmaobservatory/models/ownership_positions_row.rb +26 -15
  240. data/lib/pharmaobservatory/models/pdufa_dates_response.rb +3 -3
  241. data/lib/pharmaobservatory/models/site_beds_yearly_response.rb +3 -3
  242. data/lib/pharmaobservatory/models/site_cro_trials_response.rb +3 -3
  243. data/lib/pharmaobservatory/models/site_hospitals_response.rb +3 -3
  244. data/lib/pharmaobservatory/models/site_investigators_response.rb +3 -3
  245. data/lib/pharmaobservatory/models/site_trial_conditions_response.rb +3 -3
  246. data/lib/pharmaobservatory/models/site_trial_drugs_response.rb +3 -3
  247. data/lib/pharmaobservatory/models/site_trials_response.rb +3 -3
  248. data/lib/pharmaobservatory/models/sites_record.rb +2 -2
  249. data/lib/pharmaobservatory/models/sites_response.rb +3 -3
  250. data/lib/pharmaobservatory/models/sponsor_recruitment_by_phase_response.rb +3 -3
  251. data/lib/pharmaobservatory/models/sponsor_recruitment_duration_response.rb +3 -3
  252. data/lib/pharmaobservatory/models/sponsor_trial_start_forecast_response.rb +3 -3
  253. data/lib/pharmaobservatory/models/sponsor_trials_response.rb +3 -3
  254. data/lib/pharmaobservatory/models/sponsor_trials_row.rb +1 -1
  255. data/lib/pharmaobservatory/models/supplier_capability_esg_response.rb +478 -0
  256. data/lib/pharmaobservatory/models/supplier_capability_esg_row.rb +480 -0
  257. data/lib/pharmaobservatory/models/supplier_services_response.rb +478 -0
  258. data/lib/pharmaobservatory/models/supplier_services_row.rb +289 -0
  259. data/lib/pharmaobservatory/models/supplier_sites_response.rb +478 -0
  260. data/lib/pharmaobservatory/models/supplier_sites_row.rb +357 -0
  261. data/lib/pharmaobservatory/models/suppliers_record.rb +385 -0
  262. data/lib/pharmaobservatory/models/suppliers_response.rb +478 -0
  263. data/lib/pharmaobservatory/models/suppliers_row.rb +544 -0
  264. data/lib/pharmaobservatory/models/target_associations_response.rb +478 -0
  265. data/lib/pharmaobservatory/models/target_associations_row.rb +267 -0
  266. data/lib/pharmaobservatory/models/target_crowding_response.rb +478 -0
  267. data/lib/pharmaobservatory/models/target_crowding_row.rb +289 -0
  268. data/lib/pharmaobservatory/models/target_drugs_response.rb +478 -0
  269. data/lib/pharmaobservatory/models/target_drugs_row.rb +335 -0
  270. data/lib/pharmaobservatory/models/target_evidence_response.rb +478 -0
  271. data/lib/pharmaobservatory/models/target_evidence_row.rb +410 -0
  272. data/lib/pharmaobservatory/models/target_patent_mentions_response.rb +478 -0
  273. data/lib/pharmaobservatory/models/target_patent_mentions_row.rb +311 -0
  274. data/lib/pharmaobservatory/models/target_programs_response.rb +478 -0
  275. data/lib/pharmaobservatory/models/target_programs_row.rb +447 -0
  276. data/lib/pharmaobservatory/models/target_publications_response.rb +478 -0
  277. data/lib/pharmaobservatory/models/target_publications_row.rb +300 -0
  278. data/lib/pharmaobservatory/models/target_regulatory_precedent_response.rb +478 -0
  279. data/lib/pharmaobservatory/models/target_regulatory_precedent_row.rb +333 -0
  280. data/lib/pharmaobservatory/models/target_trials_response.rb +478 -0
  281. data/lib/pharmaobservatory/models/target_trials_row.rb +377 -0
  282. data/lib/pharmaobservatory/models/targets_record.rb +385 -0
  283. data/lib/pharmaobservatory/models/targets_response.rb +478 -0
  284. data/lib/pharmaobservatory/models/targets_row.rb +498 -0
  285. data/lib/pharmaobservatory/models/trial_adverse_events_response.rb +3 -3
  286. data/lib/pharmaobservatory/models/trial_changes_response.rb +3 -3
  287. data/lib/pharmaobservatory/models/trial_delivery_response.rb +3 -3
  288. data/lib/pharmaobservatory/models/trial_demographics_response.rb +3 -3
  289. data/lib/pharmaobservatory/models/trial_drug_classes_response.rb +478 -0
  290. data/lib/pharmaobservatory/models/trial_drug_classes_row.rb +278 -0
  291. data/lib/pharmaobservatory/models/trial_drugs_response.rb +3 -3
  292. data/lib/pharmaobservatory/models/trial_enrollment_history_response.rb +3 -3
  293. data/lib/pharmaobservatory/models/trial_enrollment_rate_response.rb +3 -3
  294. data/lib/pharmaobservatory/models/trial_extracted_endpoints_response.rb +3 -3
  295. data/lib/pharmaobservatory/models/trial_kols_response.rb +478 -0
  296. data/lib/pharmaobservatory/models/trial_kols_row.rb +302 -0
  297. data/lib/pharmaobservatory/models/trial_outcome_measures_response.rb +3 -3
  298. data/lib/pharmaobservatory/models/trial_research_payments_response.rb +478 -0
  299. data/lib/pharmaobservatory/models/trial_research_payments_row.rb +366 -0
  300. data/lib/pharmaobservatory/models/trial_site_history_response.rb +478 -0
  301. data/lib/pharmaobservatory/models/trial_site_history_row.rb +401 -0
  302. data/lib/pharmaobservatory/models/trial_sites_response.rb +3 -3
  303. data/lib/pharmaobservatory/models/trials_record.rb +2 -2
  304. data/lib/pharmaobservatory/models/trials_response.rb +3 -3
  305. data/lib/pharmaobservatory/version.rb +1 -1
  306. data/lib/pharmaobservatory.rb +71 -3
  307. metadata +144 -8
data/docs/BiomarkerCdxAssertionsResponse.md CHANGED
@@ -8,7 +8,7 @@
8
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  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerCdxAssertionsRow>**](BiomarkerCdxAssertionsRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
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  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
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  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerEvidenceResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerEvidenceRow>**](BiomarkerEvidenceRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerLiteratureResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerLiteratureRow>**](BiomarkerLiteratureRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerPublishingCompaniesResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerPublishingCompaniesRow>**](BiomarkerPublishingCompaniesRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerPublishingCompaniesRow.md CHANGED
@@ -18,6 +18,10 @@
18
18
  | **supporting_pmids** | **Array<String>** | A sample of the supporting PubMed ids. | [optional] |
19
19
  | **supporting_pmids_truncated** | **Boolean** | True when the sample is shorter than the paper count. | [optional] |
20
20
  | **n_papers_excluded_as_consortium** | **Integer** | Papers left out because they name too many organizations. | [optional] |
21
+ | **corpus_articles** | **Integer** | Articles in the trial-cited publication set the publishing counts are drawn from (not all of PubMed). Corpus-wide, the same value on every row, never per biomarker or per company. | [optional] |
22
+ | **n_affiliations** | **Integer** | Distinct author affiliation strings in the corpus. Corpus-wide, the same value on every row. | [optional] |
23
+ | **n_resolved_affiliations** | **Integer** | Affiliation strings that resolved to an organization. Corpus-wide, the same value on every row. | [optional] |
24
+ | **affiliation_resolved_share** | **Float** | n_resolved_affiliations divided by n_affiliations, rounded to four places. Corpus-wide, the same value on every row: how much of the corpus the company attribution can see, not a figure about this biomarker. | [optional] |
21
25
 
22
26
  ## Example
23
27
 
@@ -38,7 +42,11 @@ instance = PharmaObservatory::BiomarkerPublishingCompaniesRow.new(
38
42
  last_pub_year: null,
39
43
  supporting_pmids: null,
40
44
  supporting_pmids_truncated: null,
41
- n_papers_excluded_as_consortium: null
45
+ n_papers_excluded_as_consortium: null,
46
+ corpus_articles: null,
47
+ n_affiliations: null,
48
+ n_resolved_affiliations: null,
49
+ affiliation_resolved_share: null
42
50
  )
43
51
  ```
44
52
 
data/docs/BiomarkerRelationsResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerRelationsRow>**](BiomarkerRelationsRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerSampleCoverageResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerSampleCoverageRow>**](BiomarkerSampleCoverageRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerSamplePrevalenceResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerSamplePrevalenceRow>**](BiomarkerSamplePrevalenceRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerValidationResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerValidationRow>**](BiomarkerValidationRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkerVariantMentionsResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array<BiomarkerVariantMentionsRow>**](BiomarkerVariantMentionsRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array<String>** | | [optional] |
23
23
  | **withheld_columns** | **Array<String>** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash<String, Object>** | | [optional] |
28
28
 
data/docs/BiomarkersApi.md CHANGED
@@ -4,6 +4,8 @@ All URIs are relative to *https://pharmaobservatory.com*
4
4
 
5
5
  | Method | HTTP request | Description |
6
6
  | ------ | ------------ | ----------- |
7
+ | [**biomarkers_biomarker_assay_evidence**](BiomarkersApi.md#biomarkers_biomarker_assay_evidence) | **GET** /api/v1/biomarkers/{id}/biomarker_assay_evidence | Biomarker assay evidence from the literature |
8
+ | [**biomarkers_biomarker_assay_whitespace**](BiomarkersApi.md#biomarkers_biomarker_assay_whitespace) | **GET** /api/v1/biomarkers/{id}/biomarker_assay_whitespace | Biomarker assay whitespace (evidence against supplier supply) |
7
9
  | [**biomarkers_biomarker_bqp_assertions**](BiomarkersApi.md#biomarkers_biomarker_bqp_assertions) | **GET** /api/v1/biomarkers/{id}/biomarker_bqp_assertions | FDA biomarker qualification projects |
8
10
  | [**biomarkers_biomarker_cdx_assertions**](BiomarkersApi.md#biomarkers_biomarker_cdx_assertions) | **GET** /api/v1/biomarkers/{id}/biomarker_cdx_assertions | FDA companion diagnostic assertions |
9
11
  | [**biomarkers_biomarker_evidence**](BiomarkersApi.md#biomarkers_biomarker_evidence) | **GET** /api/v1/biomarkers/{id}/biomarker_evidence | Biomarker evidence |
@@ -18,6 +20,164 @@ All URIs are relative to *https://pharmaobservatory.com*
18
20
  | [**biomarkers_list**](BiomarkersApi.md#biomarkers_list) | **GET** /api/v1/biomarkers | List biomarkers |
19
21
 
20
22
 
23
+ ## biomarkers_biomarker_assay_evidence
24
+
25
+ > <BiomarkerAssayEvidenceResponse> biomarkers_biomarker_assay_evidence(id, opts)
26
+
27
+ Biomarker assay evidence from the literature
28
+
29
+ ### Examples
30
+
31
+ ```ruby
32
+ require 'time'
33
+ require 'pharmaobservatory'
34
+ # setup authorization
35
+ PharmaObservatory.configure do |config|
36
+ # Configure Bearer authorization (JWT): ApiBearerJwt
37
+ config.access_token = 'YOUR_BEARER_TOKEN'
38
+ end
39
+
40
+ api_instance = PharmaObservatory::BiomarkersApi.new
41
+ id = 'ESR1' # String |
42
+ opts = {
43
+ cursor: 'cursor_example', # String | The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it.
44
+ limit: 56, # Integer | Rows per page, up to 500 (default 50).
45
+ sort: 'sort_example', # String | Comma separated columns, a leading minus for descending: sort=a,-b.
46
+ group_by: 'group_by_example', # String | A dimension to group by; a date takes :year, :quarter or :month.
47
+ measure: 'measure_example' # String | count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col).
48
+ }
49
+
50
+ begin
51
+ # Biomarker assay evidence from the literature
52
+ result = api_instance.biomarkers_biomarker_assay_evidence(id, opts)
53
+ p result
54
+ rescue PharmaObservatory::ApiError => e
55
+ puts "Error when calling BiomarkersApi->biomarkers_biomarker_assay_evidence: #{e}"
56
+ end
57
+ ```
58
+
59
+ #### Using the biomarkers_biomarker_assay_evidence_with_http_info variant
60
+
61
+ This returns an Array which contains the response data, status code and headers.
62
+
63
+ > <Array(<BiomarkerAssayEvidenceResponse>, Integer, Hash)> biomarkers_biomarker_assay_evidence_with_http_info(id, opts)
64
+
65
+ ```ruby
66
+ begin
67
+ # Biomarker assay evidence from the literature
68
+ data, status_code, headers = api_instance.biomarkers_biomarker_assay_evidence_with_http_info(id, opts)
69
+ p status_code # => 2xx
70
+ p headers # => { ... }
71
+ p data # => <BiomarkerAssayEvidenceResponse>
72
+ rescue PharmaObservatory::ApiError => e
73
+ puts "Error when calling BiomarkersApi->biomarkers_biomarker_assay_evidence_with_http_info: #{e}"
74
+ end
75
+ ```
76
+
77
+ ### Parameters
78
+
79
+ | Name | Type | Description | Notes |
80
+ | ---- | ---- | ----------- | ----- |
81
+ | **id** | **String** | | |
82
+ | **cursor** | **String** | The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it. | [optional] |
83
+ | **limit** | **Integer** | Rows per page, up to 500 (default 50). | [optional] |
84
+ | **sort** | **String** | Comma separated columns, a leading minus for descending: sort&#x3D;a,-b. | [optional] |
85
+ | **group_by** | **String** | A dimension to group by; a date takes :year, :quarter or :month. | [optional] |
86
+ | **measure** | **String** | count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col). | [optional] |
87
+
88
+ ### Return type
89
+
90
+ [**BiomarkerAssayEvidenceResponse**](BiomarkerAssayEvidenceResponse.md)
91
+
92
+ ### Authorization
93
+
94
+ [ApiBearerJwt](../README.md#ApiBearerJwt)
95
+
96
+ ### HTTP request headers
97
+
98
+ - **Content-Type**: Not defined
99
+ - **Accept**: application/json
100
+
101
+
102
+ ## biomarkers_biomarker_assay_whitespace
103
+
104
+ > <BiomarkerAssayWhitespaceResponse> biomarkers_biomarker_assay_whitespace(id, opts)
105
+
106
+ Biomarker assay whitespace (evidence against supplier supply)
107
+
108
+ ### Examples
109
+
110
+ ```ruby
111
+ require 'time'
112
+ require 'pharmaobservatory'
113
+ # setup authorization
114
+ PharmaObservatory.configure do |config|
115
+ # Configure Bearer authorization (JWT): ApiBearerJwt
116
+ config.access_token = 'YOUR_BEARER_TOKEN'
117
+ end
118
+
119
+ api_instance = PharmaObservatory::BiomarkersApi.new
120
+ id = 'ESR1' # String |
121
+ opts = {
122
+ cursor: 'cursor_example', # String | The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it.
123
+ limit: 56, # Integer | Rows per page, up to 500 (default 50).
124
+ sort: 'sort_example', # String | Comma separated columns, a leading minus for descending: sort=a,-b.
125
+ group_by: 'group_by_example', # String | A dimension to group by; a date takes :year, :quarter or :month.
126
+ measure: 'measure_example' # String | count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col).
127
+ }
128
+
129
+ begin
130
+ # Biomarker assay whitespace (evidence against supplier supply)
131
+ result = api_instance.biomarkers_biomarker_assay_whitespace(id, opts)
132
+ p result
133
+ rescue PharmaObservatory::ApiError => e
134
+ puts "Error when calling BiomarkersApi->biomarkers_biomarker_assay_whitespace: #{e}"
135
+ end
136
+ ```
137
+
138
+ #### Using the biomarkers_biomarker_assay_whitespace_with_http_info variant
139
+
140
+ This returns an Array which contains the response data, status code and headers.
141
+
142
+ > <Array(<BiomarkerAssayWhitespaceResponse>, Integer, Hash)> biomarkers_biomarker_assay_whitespace_with_http_info(id, opts)
143
+
144
+ ```ruby
145
+ begin
146
+ # Biomarker assay whitespace (evidence against supplier supply)
147
+ data, status_code, headers = api_instance.biomarkers_biomarker_assay_whitespace_with_http_info(id, opts)
148
+ p status_code # => 2xx
149
+ p headers # => { ... }
150
+ p data # => <BiomarkerAssayWhitespaceResponse>
151
+ rescue PharmaObservatory::ApiError => e
152
+ puts "Error when calling BiomarkersApi->biomarkers_biomarker_assay_whitespace_with_http_info: #{e}"
153
+ end
154
+ ```
155
+
156
+ ### Parameters
157
+
158
+ | Name | Type | Description | Notes |
159
+ | ---- | ---- | ----------- | ----- |
160
+ | **id** | **String** | | |
161
+ | **cursor** | **String** | The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it. | [optional] |
162
+ | **limit** | **Integer** | Rows per page, up to 500 (default 50). | [optional] |
163
+ | **sort** | **String** | Comma separated columns, a leading minus for descending: sort&#x3D;a,-b. | [optional] |
164
+ | **group_by** | **String** | A dimension to group by; a date takes :year, :quarter or :month. | [optional] |
165
+ | **measure** | **String** | count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col). | [optional] |
166
+
167
+ ### Return type
168
+
169
+ [**BiomarkerAssayWhitespaceResponse**](BiomarkerAssayWhitespaceResponse.md)
170
+
171
+ ### Authorization
172
+
173
+ [ApiBearerJwt](../README.md#ApiBearerJwt)
174
+
175
+ ### HTTP request headers
176
+
177
+ - **Content-Type**: Not defined
178
+ - **Accept**: application/json
179
+
180
+
21
181
  ## biomarkers_biomarker_bqp_assertions
22
182
 
23
183
  > <BiomarkerBqpAssertionsResponse> biomarkers_biomarker_bqp_assertions(id, opts)
data/docs/BiomarkersRecord.md CHANGED
@@ -11,8 +11,8 @@
11
11
  | **datasets** | [**Array&lt;DatasetListing&gt;**](DatasetListing.md) | | |
12
12
  | **attribution** | [**Array&lt;DatasetAttribution&gt;**](DatasetAttribution.md) | | [optional] |
13
13
  | **source_credit** | **String** | | [optional] |
14
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
15
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
14
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
15
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
16
16
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
17
17
  | **restriction** | **Hash&lt;String, Object&gt;** | | [optional] |
18
18
 
data/docs/BiomarkersResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array&lt;DatasetColumn&gt;**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array&lt;BiomarkersRow&gt;**](BiomarkersRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array&lt;String&gt;** | | [optional] |
23
23
  | **withheld_columns** | **Array&lt;String&gt;** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash&lt;String, Object&gt;** | | [optional] |
28
28
 
data/docs/BiomarkersRow.md CHANGED
@@ -15,6 +15,7 @@
15
15
  | **target_id** | **String** | The target&#39;s Ensembl gene id. | [optional] |
16
16
  | **hgnc_id** | **String** | The HUGO Gene Nomenclature Committee (HGNC) gene id. | [optional] |
17
17
  | **uniprot_accession** | **String** | The UniProt accession. | [optional] |
18
+ | **target_protein_name** | **String** | The recommended name of the protein the biomarker&#39;s gene encodes: the UniProt protein of the accession, else the first UniProt protein of the gene symbol, else the Open Targets target name. Null when none names it. | [optional] |
18
19
  | **feature_code** | **String** | Feature code for a non-gene feature. | [optional] |
19
20
  | **feature_type** | **String** | Feature type for a non-gene feature. | [optional] |
20
21
  | **evidence_tier** | **Integer** | Strongest evidence tier: 1 companion diagnostic of the US Food and Drug Administration (FDA) through 6 no evidence. | [optional] |
@@ -48,6 +49,7 @@ instance = PharmaObservatory::BiomarkersRow.new(
48
49
  target_id: null,
49
50
  hgnc_id: null,
50
51
  uniprot_accession: null,
52
+ target_protein_name: null,
51
53
  feature_code: null,
52
54
  feature_type: null,
53
55
  evidence_tier: null,
data/docs/CellLinesRecord.md CHANGED
@@ -11,8 +11,8 @@
11
11
  | **datasets** | [**Array&lt;DatasetListing&gt;**](DatasetListing.md) | | |
12
12
  | **attribution** | [**Array&lt;DatasetAttribution&gt;**](DatasetAttribution.md) | | [optional] |
13
13
  | **source_credit** | **String** | | [optional] |
14
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
15
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
14
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
15
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
16
16
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
17
17
  | **restriction** | **Hash&lt;String, Object&gt;** | | [optional] |
18
18
 
data/docs/CellLinesResponse.md CHANGED
@@ -8,7 +8,7 @@
8
8
  | **grain** | **String** | | [optional] |
9
9
  | **object_type** | **String** | | [optional] |
10
10
  | **id** | **String** | | [optional] |
11
- | **scope** | [**BiomarkerCdxAssertionsResponseScope**](BiomarkerCdxAssertionsResponseScope.md) | | [optional] |
11
+ | **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
12
12
  | **columns** | [**Array&lt;DatasetColumn&gt;**](DatasetColumn.md) | | |
13
13
  | **rows** | [**Array&lt;CellLinesRow&gt;**](CellLinesRow.md) | | |
14
14
  | **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
@@ -21,8 +21,8 @@
21
21
  | **source_credit** | **String** | | [optional] |
22
22
  | **withheld_tiers** | **Array&lt;String&gt;** | | [optional] |
23
23
  | **withheld_columns** | **Array&lt;String&gt;** | | [optional] |
24
- | **freshness** | [**BiomarkerCdxAssertionsResponseFreshness**](BiomarkerCdxAssertionsResponseFreshness.md) | | [optional] |
25
- | **build** | [**BiomarkerCdxAssertionsResponseBuild**](BiomarkerCdxAssertionsResponseBuild.md) | | [optional] |
24
+ | **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
25
+ | **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
26
26
  | **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
27
27
  | **restriction** | **Hash&lt;String, Object&gt;** | | [optional] |
28
28