pharmaobservatory 0.1.0

data/lib/pharmaobservatory/models/api_v1_biomarker_assay_screen_get200_response_evidence_inner_source_ref.rb

@@ -0,0 +1,369 @@
+=begin
+#Pharma Observatory Public REST API
+
+#No description provided (generated by Openapi Generator https://github.com/openapitools/openapi-generator)
+
+The version of the OpenAPI document: 1.0.0
+
+Generated by: https://openapi-generator.tech
+Generator version: 7.13.0
+
+=end
+
+require 'date'
+require 'time'
+
+module PharmaObservatory
+  class ApiV1BiomarkerAssayScreenGet200ResponseEvidenceInnerSourceRef
+    attr_accessor :source_url
+
+    attr_accessor :document_id
+
+    attr_accessor :source_type
+
+    attr_accessor :canonical_id
+
+    attr_accessor :document_sha
+
+    attr_accessor :evidence_quote
+
+    # Attribute mapping from ruby-style variable name to JSON key.
+    def self.attribute_map
+      {
+        :'source_url' => :'source_url',
+        :'document_id' => :'document_id',
+        :'source_type' => :'source_type',
+        :'canonical_id' => :'canonical_id',
+        :'document_sha' => :'document_sha',
+        :'evidence_quote' => :'evidence_quote'
+      }
+    end
+
+    # Returns attribute mapping this model knows about
+    def self.acceptable_attribute_map
+      attribute_map
+    end
+
+    # Returns all the JSON keys this model knows about
+    def self.acceptable_attributes
+      acceptable_attribute_map.values
+    end
+
+    # Attribute type mapping.
+    def self.openapi_types
+      {
+        :'source_url' => :'String',
+        :'document_id' => :'String',
+        :'source_type' => :'String',
+        :'canonical_id' => :'String',
+        :'document_sha' => :'String',
+        :'evidence_quote' => :'Array<String>'
+      }
+    end
+
+    # List of attributes with nullable: true
+    def self.openapi_nullable
+      Set.new([
+      ])
+    end
+
+    # Initializes the object
+    # @param [Hash] attributes Model attributes in the form of hash
+    def initialize(attributes = {})
+      if (!attributes.is_a?(Hash))
+        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::ApiV1BiomarkerAssayScreenGet200ResponseEvidenceInnerSourceRef` initialize method"
+      end
+
+      # check to see if the attribute exists and convert string to symbol for hash key
+      acceptable_attribute_map = self.class.acceptable_attribute_map
+      attributes = attributes.each_with_object({}) { |(k, v), h|
+        if (!acceptable_attribute_map.key?(k.to_sym))
+          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::ApiV1BiomarkerAssayScreenGet200ResponseEvidenceInnerSourceRef`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
+        end
+        h[k.to_sym] = v
+      }
+
+      if attributes.key?(:'source_url')
+        self.source_url = attributes[:'source_url']
+      else
+        self.source_url = nil
+      end
+
+      if attributes.key?(:'document_id')
+        self.document_id = attributes[:'document_id']
+      else
+        self.document_id = nil
+      end
+
+      if attributes.key?(:'source_type')
+        self.source_type = attributes[:'source_type']
+      else
+        self.source_type = nil
+      end
+
+      if attributes.key?(:'canonical_id')
+        self.canonical_id = attributes[:'canonical_id']
+      else
+        self.canonical_id = nil
+      end
+
+      if attributes.key?(:'document_sha')
+        self.document_sha = attributes[:'document_sha']
+      else
+        self.document_sha = nil
+      end
+
+      if attributes.key?(:'evidence_quote')
+        if (value = attributes[:'evidence_quote']).is_a?(Array)
+          self.evidence_quote = value
+        end
+      else
+        self.evidence_quote = nil
+      end
+    end
+
+    # Show invalid properties with the reasons. Usually used together with valid?
+    # @return Array for valid properties with the reasons
+    def list_invalid_properties
+      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
+      invalid_properties = Array.new
+      if @source_url.nil?
+        invalid_properties.push('invalid value for "source_url", source_url cannot be nil.')
+      end
+
+      if @document_id.nil?
+        invalid_properties.push('invalid value for "document_id", document_id cannot be nil.')
+      end
+
+      if @source_type.nil?
+        invalid_properties.push('invalid value for "source_type", source_type cannot be nil.')
+      end
+
+      if @canonical_id.nil?
+        invalid_properties.push('invalid value for "canonical_id", canonical_id cannot be nil.')
+      end
+
+      if @document_sha.nil?
+        invalid_properties.push('invalid value for "document_sha", document_sha cannot be nil.')
+      end
+
+      if @evidence_quote.nil?
+        invalid_properties.push('invalid value for "evidence_quote", evidence_quote cannot be nil.')
+      end
+
+      invalid_properties
+    end
+
+    # Check to see if the all the properties in the model are valid
+    # @return true if the model is valid
+    def valid?
+      warn '[DEPRECATED] the `valid?` method is obsolete'
+      return false if @source_url.nil?
+      return false if @document_id.nil?
+      return false if @source_type.nil?
+      return false if @canonical_id.nil?
+      return false if @document_sha.nil?
+      return false if @evidence_quote.nil?
+      true
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] source_url Value to be assigned
+    def source_url=(source_url)
+      if source_url.nil?
+        fail ArgumentError, 'source_url cannot be nil'
+      end
+
+      @source_url = source_url
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] document_id Value to be assigned
+    def document_id=(document_id)
+      if document_id.nil?
+        fail ArgumentError, 'document_id cannot be nil'
+      end
+
+      @document_id = document_id
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] source_type Value to be assigned
+    def source_type=(source_type)
+      if source_type.nil?
+        fail ArgumentError, 'source_type cannot be nil'
+      end
+
+      @source_type = source_type
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] canonical_id Value to be assigned
+    def canonical_id=(canonical_id)
+      if canonical_id.nil?
+        fail ArgumentError, 'canonical_id cannot be nil'
+      end
+
+      @canonical_id = canonical_id
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] document_sha Value to be assigned
+    def document_sha=(document_sha)
+      if document_sha.nil?
+        fail ArgumentError, 'document_sha cannot be nil'
+      end
+
+      @document_sha = document_sha
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] evidence_quote Value to be assigned
+    def evidence_quote=(evidence_quote)
+      if evidence_quote.nil?
+        fail ArgumentError, 'evidence_quote cannot be nil'
+      end
+
+      @evidence_quote = evidence_quote
+    end
+
+    # Checks equality by comparing each attribute.
+    # @param [Object] Object to be compared
+    def ==(o)
+      return true if self.equal?(o)
+      self.class == o.class &&
+          source_url == o.source_url &&
+          document_id == o.document_id &&
+          source_type == o.source_type &&
+          canonical_id == o.canonical_id &&
+          document_sha == o.document_sha &&
+          evidence_quote == o.evidence_quote
+    end
+
+    # @see the `==` method
+    # @param [Object] Object to be compared
+    def eql?(o)
+      self == o
+    end
+
+    # Calculates hash code according to all attributes.
+    # @return [Integer] Hash code
+    def hash
+      [source_url, document_id, source_type, canonical_id, document_sha, evidence_quote].hash
+    end
+
+    # Builds the object from hash
+    # @param [Hash] attributes Model attributes in the form of hash
+    # @return [Object] Returns the model itself
+    def self.build_from_hash(attributes)
+      return nil unless attributes.is_a?(Hash)
+      attributes = attributes.transform_keys(&:to_sym)
+      transformed_hash = {}
+      openapi_types.each_pair do |key, type|
+        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = nil
+        elsif type =~ /\AArray<(.*)>/i
+          # check to ensure the input is an array given that the attribute
+          # is documented as an array but the input is not
+          if attributes[attribute_map[key]].is_a?(Array)
+            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
+          end
+        elsif !attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
+        end
+      end
+      new(transformed_hash)
+    end
+
+    # Deserializes the data based on type
+    # @param string type Data type
+    # @param string value Value to be deserialized
+    # @return [Object] Deserialized data
+    def self._deserialize(type, value)
+      case type.to_sym
+      when :Time
+        Time.parse(value)
+      when :Date
+        Date.parse(value)
+      when :String
+        value.to_s
+      when :Integer
+        value.to_i
+      when :Float
+        value.to_f
+      when :Boolean
+        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
+          true
+        else
+          false
+        end
+      when :Object
+        # generic object (usually a Hash), return directly
+        value
+      when /\AArray<(?<inner_type>.+)>\z/
+        inner_type = Regexp.last_match[:inner_type]
+        value.map { |v| _deserialize(inner_type, v) }
+      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
+        k_type = Regexp.last_match[:k_type]
+        v_type = Regexp.last_match[:v_type]
+        {}.tap do |hash|
+          value.each do |k, v|
+            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
+          end
+        end
+      else # model
+        # models (e.g. Pet) or oneOf
+        klass = PharmaObservatory.const_get(type)
+        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
+      end
+    end
+
+    # Returns the string representation of the object
+    # @return [String] String presentation of the object
+    def to_s
+      to_hash.to_s
+    end
+
+    # to_body is an alias to to_hash (backward compatibility)
+    # @return [Hash] Returns the object in the form of hash
+    def to_body
+      to_hash
+    end
+
+    # Returns the object in the form of hash
+    # @return [Hash] Returns the object in the form of hash
+    def to_hash
+      hash = {}
+      self.class.attribute_map.each_pair do |attr, param|
+        value = self.send(attr)
+        if value.nil?
+          is_nullable = self.class.openapi_nullable.include?(attr)
+          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
+        end
+
+        hash[param] = _to_hash(value)
+      end
+      hash
+    end
+
+    # Outputs non-array value in the form of hash
+    # For object, use to_hash. Otherwise, just return the value
+    # @param [Object] value Any valid value
+    # @return [Hash] Returns the value in the form of hash
+    def _to_hash(value)
+      if value.is_a?(Array)
+        value.compact.map { |v| _to_hash(v) }
+      elsif value.is_a?(Hash)
+        {}.tap do |hash|
+          value.each { |k, v| hash[k] = _to_hash(v) }
+        end
+      elsif value.respond_to? :to_hash
+        value.to_hash
+      else
+        value
+      end
+    end
+
+  end
+
+end

data/lib/pharmaobservatory/models/api_v1_biomarker_assay_screen_get200_response_filters.rb

@@ -0,0 +1,283 @@
+=begin
+#Pharma Observatory Public REST API
+
+#No description provided (generated by Openapi Generator https://github.com/openapitools/openapi-generator)
+
+The version of the OpenAPI document: 1.0.0
+
+Generated by: https://openapi-generator.tech
+Generator version: 7.13.0
+
+=end
+
+require 'date'
+require 'time'
+
+module PharmaObservatory
+  class ApiV1BiomarkerAssayScreenGet200ResponseFilters
+    attr_accessor :gene
+
+    attr_accessor :assay_provider_company
+
+    attr_accessor :pmid
+
+    attr_accessor :document_id
+
+    attr_accessor :gene_resolution_status
+
+    attr_accessor :validation_type_mentioned
+
+    # Attribute mapping from ruby-style variable name to JSON key.
+    def self.attribute_map
+      {
+        :'gene' => :'gene',
+        :'assay_provider_company' => :'assay_provider_company',
+        :'pmid' => :'pmid',
+        :'document_id' => :'document_id',
+        :'gene_resolution_status' => :'gene_resolution_status',
+        :'validation_type_mentioned' => :'validation_type_mentioned'
+      }
+    end
+
+    # Returns attribute mapping this model knows about
+    def self.acceptable_attribute_map
+      attribute_map
+    end
+
+    # Returns all the JSON keys this model knows about
+    def self.acceptable_attributes
+      acceptable_attribute_map.values
+    end
+
+    # Attribute type mapping.
+    def self.openapi_types
+      {
+        :'gene' => :'String',
+        :'assay_provider_company' => :'String',
+        :'pmid' => :'String',
+        :'document_id' => :'String',
+        :'gene_resolution_status' => :'String',
+        :'validation_type_mentioned' => :'String'
+      }
+    end
+
+    # List of attributes with nullable: true
+    def self.openapi_nullable
+      Set.new([
+        :'gene',
+        :'assay_provider_company',
+        :'pmid',
+        :'document_id',
+        :'gene_resolution_status',
+        :'validation_type_mentioned'
+      ])
+    end
+
+    # Initializes the object
+    # @param [Hash] attributes Model attributes in the form of hash
+    def initialize(attributes = {})
+      if (!attributes.is_a?(Hash))
+        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::ApiV1BiomarkerAssayScreenGet200ResponseFilters` initialize method"
+      end
+
+      # check to see if the attribute exists and convert string to symbol for hash key
+      acceptable_attribute_map = self.class.acceptable_attribute_map
+      attributes = attributes.each_with_object({}) { |(k, v), h|
+        if (!acceptable_attribute_map.key?(k.to_sym))
+          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::ApiV1BiomarkerAssayScreenGet200ResponseFilters`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
+        end
+        h[k.to_sym] = v
+      }
+
+      if attributes.key?(:'gene')
+        self.gene = attributes[:'gene']
+      else
+        self.gene = nil
+      end
+
+      if attributes.key?(:'assay_provider_company')
+        self.assay_provider_company = attributes[:'assay_provider_company']
+      else
+        self.assay_provider_company = nil
+      end
+
+      if attributes.key?(:'pmid')
+        self.pmid = attributes[:'pmid']
+      else
+        self.pmid = nil
+      end
+
+      if attributes.key?(:'document_id')
+        self.document_id = attributes[:'document_id']
+      else
+        self.document_id = nil
+      end
+
+      if attributes.key?(:'gene_resolution_status')
+        self.gene_resolution_status = attributes[:'gene_resolution_status']
+      else
+        self.gene_resolution_status = nil
+      end
+
+      if attributes.key?(:'validation_type_mentioned')
+        self.validation_type_mentioned = attributes[:'validation_type_mentioned']
+      else
+        self.validation_type_mentioned = nil
+      end
+    end
+
+    # Show invalid properties with the reasons. Usually used together with valid?
+    # @return Array for valid properties with the reasons
+    def list_invalid_properties
+      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
+      invalid_properties = Array.new
+      invalid_properties
+    end
+
+    # Check to see if the all the properties in the model are valid
+    # @return true if the model is valid
+    def valid?
+      warn '[DEPRECATED] the `valid?` method is obsolete'
+      true
+    end
+
+    # Checks equality by comparing each attribute.
+    # @param [Object] Object to be compared
+    def ==(o)
+      return true if self.equal?(o)
+      self.class == o.class &&
+          gene == o.gene &&
+          assay_provider_company == o.assay_provider_company &&
+          pmid == o.pmid &&
+          document_id == o.document_id &&
+          gene_resolution_status == o.gene_resolution_status &&
+          validation_type_mentioned == o.validation_type_mentioned
+    end
+
+    # @see the `==` method
+    # @param [Object] Object to be compared
+    def eql?(o)
+      self == o
+    end
+
+    # Calculates hash code according to all attributes.
+    # @return [Integer] Hash code
+    def hash
+      [gene, assay_provider_company, pmid, document_id, gene_resolution_status, validation_type_mentioned].hash
+    end
+
+    # Builds the object from hash
+    # @param [Hash] attributes Model attributes in the form of hash
+    # @return [Object] Returns the model itself
+    def self.build_from_hash(attributes)
+      return nil unless attributes.is_a?(Hash)
+      attributes = attributes.transform_keys(&:to_sym)
+      transformed_hash = {}
+      openapi_types.each_pair do |key, type|
+        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = nil
+        elsif type =~ /\AArray<(.*)>/i
+          # check to ensure the input is an array given that the attribute
+          # is documented as an array but the input is not
+          if attributes[attribute_map[key]].is_a?(Array)
+            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
+          end
+        elsif !attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
+        end
+      end
+      new(transformed_hash)
+    end
+
+    # Deserializes the data based on type
+    # @param string type Data type
+    # @param string value Value to be deserialized
+    # @return [Object] Deserialized data
+    def self._deserialize(type, value)
+      case type.to_sym
+      when :Time
+        Time.parse(value)
+      when :Date
+        Date.parse(value)
+      when :String
+        value.to_s
+      when :Integer
+        value.to_i
+      when :Float
+        value.to_f
+      when :Boolean
+        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
+          true
+        else
+          false
+        end
+      when :Object
+        # generic object (usually a Hash), return directly
+        value
+      when /\AArray<(?<inner_type>.+)>\z/
+        inner_type = Regexp.last_match[:inner_type]
+        value.map { |v| _deserialize(inner_type, v) }
+      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
+        k_type = Regexp.last_match[:k_type]
+        v_type = Regexp.last_match[:v_type]
+        {}.tap do |hash|
+          value.each do |k, v|
+            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
+          end
+        end
+      else # model
+        # models (e.g. Pet) or oneOf
+        klass = PharmaObservatory.const_get(type)
+        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
+      end
+    end
+
+    # Returns the string representation of the object
+    # @return [String] String presentation of the object
+    def to_s
+      to_hash.to_s
+    end
+
+    # to_body is an alias to to_hash (backward compatibility)
+    # @return [Hash] Returns the object in the form of hash
+    def to_body
+      to_hash
+    end
+
+    # Returns the object in the form of hash
+    # @return [Hash] Returns the object in the form of hash
+    def to_hash
+      hash = {}
+      self.class.attribute_map.each_pair do |attr, param|
+        value = self.send(attr)
+        if value.nil?
+          is_nullable = self.class.openapi_nullable.include?(attr)
+          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
+        end
+
+        hash[param] = _to_hash(value)
+      end
+      hash
+    end
+
+    # Outputs non-array value in the form of hash
+    # For object, use to_hash. Otherwise, just return the value
+    # @param [Object] value Any valid value
+    # @return [Hash] Returns the value in the form of hash
+    def _to_hash(value)
+      if value.is_a?(Array)
+        value.compact.map { |v| _to_hash(v) }
+      elsif value.is_a?(Hash)
+        {}.tap do |hash|
+          value.each { |k, v| hash[k] = _to_hash(v) }
+        end
+      elsif value.respond_to? :to_hash
+        value.to_hash
+      else
+        value
+      end
+    end
+
+  end
+
+end