parsley-store 0.3.2 → 0.3.3

checksums.yaml

@@ -0,0 +1,7 @@
+---
+SHA1:
+  metadata.gz: 127205fef9e3d4fc643b63e7952ba9f80069a369
+  data.tar.gz: 878294e658908172539d099855d9897d9717908b
+SHA512:
+  metadata.gz: 6812a3886b8ca8f2a60e579be49b5e453e577e862e6f834fd2949cf883c2f8fb9fa9097e164dfc8f361eab99895c881c1c0030b0fa0fabb09a48c7c91306e07b
+  data.tar.gz: 6d4f5fd32bb151f9e159c3f12855056d69dfed9f21809825c7a6e82605f2e73b27da109125db2d97900036c442227b62f5b6e23c8a47236b73f8a94650e63e30

data/.gitignore

@@ -0,0 +1,24 @@
+## MAC OS
+.DS_Store
+
+## TEXTMATE
+*.tmproj
+tmtags
+
+## EMACS
+*~
+\#*
+.\#*
+
+## VIM
+*.swp
+
+## PROJECT::GENERAL
+coverage
+rdoc
+pkg
+parsley-store.gemspec
+
+## PROJECT::SPECIFIC
+.bundle
+bundle_bin

data/.ruby-version

@@ -0,0 +1 @@
+2.0.0-p353

data/CHANGELOG

@@ -1 +1,2 @@
+0.3.3 -- updated gems, removed jeweler dependency
 0.3.1 -- updated gems, added rvm and bundle support

data/Gemfile

@@ -1,8 +1,7 @@
 source 'https://rubygems.org'
 
-gem 'biodiversity', '~> 3.1.0'
+gem 'biodiversity', '~> 3.1'
 gem 'redis', '~> 3.0'
-gem 'jeweler', '~> 1.8'
 
 group :test do
   gem 'rspec', '~> 2.13'

data/Gemfile.lock

@@ -1,45 +1,38 @@
 GEM
   remote: https://rubygems.org/
   specs:
-    biodiversity (3.1.0)
+    biodiversity (3.1.2)
       parallel
       parallel (~> 0.6)
       rake (~> 10.0)
       treetop
       treetop (~> 1.4)
       unicode_utils (~> 1.4)
-    builder (3.2.0)
-    cucumber (1.3.1)
+    builder (3.2.2)
+    cucumber (1.3.10)
       builder (>= 2.1.2)
       diff-lcs (>= 1.1.3)
-      gherkin (~> 2.12.0)
+      gherkin (~> 2.12)
+      multi_json (>= 1.7.5, < 2.0)
+      multi_test (>= 0.0.2)
+    diff-lcs (1.2.5)
+    gherkin (2.12.2)
       multi_json (~> 1.3)
-    diff-lcs (1.2.4)
-    gherkin (2.12.0)
-      multi_json (~> 1.3)
-    git (1.2.5)
-    jeweler (1.8.4)
-      bundler (~> 1.0)
-      git (>= 1.2.5)
-      rake
-      rdoc
-    json (1.7.7)
-    multi_json (1.7.3)
-    parallel (0.7.0)
+    multi_json (1.8.2)
+    multi_test (0.0.2)
+    parallel (0.9.1)
     polyglot (0.3.3)
-    rake (10.0.4)
-    rdoc (4.0.1)
-      json (~> 1.4)
-    redis (3.0.4)
-    rspec (2.13.0)
-      rspec-core (~> 2.13.0)
-      rspec-expectations (~> 2.13.0)
-      rspec-mocks (~> 2.13.0)
-    rspec-core (2.13.1)
-    rspec-expectations (2.13.0)
+    rake (10.1.0)
+    redis (3.0.6)
+    rspec (2.14.1)
+      rspec-core (~> 2.14.0)
+      rspec-expectations (~> 2.14.0)
+      rspec-mocks (~> 2.14.0)
+    rspec-core (2.14.7)
+    rspec-expectations (2.14.4)
       diff-lcs (>= 1.1.3, < 2.0)
-    rspec-mocks (2.13.1)
-    treetop (1.4.14)
+    rspec-mocks (2.14.4)
+    treetop (1.4.15)
       polyglot
       polyglot (>= 0.3.1)
     unicode_utils (1.4.0)
@@ -48,8 +41,7 @@ PLATFORMS
   ruby
 
 DEPENDENCIES
-  biodiversity (~> 3.1.0)
+  biodiversity (~> 3.1)
   cucumber (~> 1.3)
-  jeweler (~> 1.8)
   redis (~> 3.0)
   rspec (~> 2.13)

data/README.dm

@@ -0,0 +1,41 @@
+parsley-store
+=============
+
+This gem allows to dramatically increase speed of 'parsing' scientific names. 
+It stores parsed strings in Redis database and does not repeat work already done
+
+Installation
+------------
+  
+  Make sure you have Redis installed on your localhost
+
+  gem install parsley-store
+
+Usage
+-----
+
+  parser = ParsleyStore.new
+  parser.parse('Homo sapiens sapiens Linn. 1758')
+  parser.parse('Homo sapiens sapiens Linn. 1758')
+
+The second parse must be much faster!
+
+To get only canonical name:
+
+  parser.parse('Homo sapiens sapiens Linn. 1758', :canonical_only => true)
+
+Contributing
+------------
+
+1. Fork it
+2. Create your feature branch (`git checkout -b my-new-feature`)
+3. Commit your changes (`git commit -am 'Add some feature'`)
+4. Push to the branch (`git push origin my-new-feature`)
+5. Create new Pull Request
+
+Copyright
+---------
+
+Authors: [Dmitry Mozzherin][12] 
+
+Copyright (c) 2010-2014 Marine Biological Laboratory. See LICENSE for details.

data/Rakefile

@@ -1,56 +1,26 @@
-require 'rake'
-
-begin
-  require 'jeweler'
-  Jeweler::Tasks.new do |gem|
-    gem.name = "parsley-store"
-    gem.summary = %Q{Scientific Names Parser with Cached Results}
-    gem.description = %Q{Scientific names parser/atomizer with cached distributed storage of atomized data}
-    gem.email = "dmozzherin@gmail.com"
-    gem.homepage = "http://github.com/GlobalNamesArchitecture/parsley-store"
-    gem.authors = ["Dmitry Mozzherin"]
-    # gem.add_development_dependency "rspec", ">= 1.2.9"
-    # gem.add_development_dependency "cucumber", ">= 0"
-    # gem.add_dependency "biodiversity", "~> 3.0.1"
-    # gem.add_dependency "redis"
-    # gem.add_dependency "SystemTimer"
-    # gem is a Gem::Specification... see http://www.rubygems.org/read/chapter/20 for additional settings
-  end
-  Jeweler::GemcutterTasks.new
-rescue LoadError
-  puts "Jeweler (or a dependency) not available. Install it with: gem install jeweler"
-end
-
+require 'bundler'
+require 'bundler/gem_tasks'
 require 'rspec/core'
 require 'rspec/core/rake_task'
-RSpec::Core::RakeTask.new(:spec) do |spec|
-  spec.pattern = FileList['spec/**/*_spec.rb']
-end
+require 'cucumber'
+require 'cucumber/rake/task'
 
-RSpec::Core::RakeTask.new(:rcov) do |spec|
-  spec.pattern = 'spec/**/*_spec.rb'
-  spec.rcov = true
-end
+Bundler::GemHelper.install_tasks
 
 begin
-  require 'cucumber/rake/task'
-  Cucumber::Rake::Task.new(:features)
-
-  task :features => :check_dependencies
-rescue LoadError
-  task :features do
-    abort "Cucumber is not available. In order to run features, you must: sudo gem install cucumber"
-  end
+  Bundler.setup(:default, :development)
+rescue Bundler::BundlerError => e
+  $stderr.puts e.message
+  $stderr.puts 'Run `bundle install` to install missing gems'
+  exit e.status_code
 end
 
 task :default => :spec
 
-require 'rdoc/task'
-Rake::RDocTask.new do |rdoc|
-  version = File.exist?('VERSION') ? File.read('VERSION') : ""
+RSpec::Core::RakeTask.new do |t|
+  t.pattern = 'spec/**/*spec.rb'
+end
 
-  rdoc.rdoc_dir = 'rdoc'
-  rdoc.title = "name-stapler #{version}"
-  rdoc.rdoc_files.include('README*')
-  rdoc.rdoc_files.include('lib/**/*.rb')
+Cucumber::Rake::Task.new(:features) do |t|
+  t.cucumber_opts = "features --format pretty"
 end

data/lib/parsley-store.rb

@@ -1,7 +1,10 @@
 require 'redis'
 require 'biodiversity'
+require_relative 'parsley-store/version'
 
-raise "IMPORTANT: Parsley-store gem  requires ruby >= 1.9.1" if RUBY_VERSION < "1.9.1"
+if RUBY_VERSION < '1.9.1'
+  raise 'IMPORTANT: Parsley-store gem  requires ruby >= 1.9.1' 
+end
 
 class ParsleyStore
   #database numbers for Redis
@@ -37,7 +40,7 @@ class ParsleyStore
       return stored if stored
     else
       stored = @local.get(@scientific_name)
-      return JSON.parse(stored, :symbolize_names => true) if stored
+      return JSON.parse(stored, symbolize_names: true) if stored
     end
   end
 
@@ -46,15 +49,24 @@ class ParsleyStore
       @parser.parse(@scientific_name)
     rescue
       @parser = ScientificNameParser.new
-      @parser.parse(@scientific_name) rescue {:scientificName => {:parsed => false, :parser_version => ScientificNameParser::VERSION, :anonical => nil, :verbatim => @scientific_name}}
+      @parser.parse(@scientific_name) rescue {
+        scientificName: {parsed: false, 
+                         parser_version: ScientificNameParser::VERSION, 
+                         anonical: nil, 
+                         verbatim: @scientific_name}}
     end
   end
 
   def cache_parsed_data(parsed_data)
     if @canonical_only
-      @local.hset @scientific_name, 'parsed',  parsed_data[:scientificName][:parsed]
-      @local.hset @scientific_name, 'parser_version', parsed_data[:scientificName][:parser_version]
-      @local.hset @scientific_name, 'canonical', parsed_data[:scientificName][:canonical]
+      @local.hset(@scientific_name, 
+                  'parsed',  
+                  parsed_data[:scientificName][:parsed])
+      @local.hset(@scientific_name, 
+                  'parser_version', 
+                  parsed_data[:scientificName][:parser_version])
+      @local.hset(@scientific_name, 
+                  'canonical', parsed_data[:scientificName][:canonical])
       parsed_data[:scientificName][:canonical]
     else
       serialized = parsed_data.to_json

data/lib/parsley-store/version.rb

@@ -0,0 +1,3 @@
+class ParsleyStore
+  VERSION = '0.3.3'
+end

metadata

@@ -1,117 +1,70 @@
 --- !ruby/object:Gem::Specification
 name: parsley-store
 version: !ruby/object:Gem::Version
-  version: 0.3.2
-  prerelease: 
+  version: 0.3.3
 platform: ruby
 authors:
 - Dmitry Mozzherin
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2013-06-17 00:00:00.000000000 Z
-dependencies:
-- !ruby/object:Gem::Dependency
-  name: biodiversity
-  requirement: !ruby/object:Gem::Requirement
-    none: false
-    requirements:
-    - - ~>
-      - !ruby/object:Gem::Version
-        version: 3.1.0
-  type: :runtime
-  prerelease: false
-  version_requirements: !ruby/object:Gem::Requirement
-    none: false
-    requirements:
-    - - ~>
-      - !ruby/object:Gem::Version
-        version: 3.1.0
-- !ruby/object:Gem::Dependency
-  name: redis
-  requirement: !ruby/object:Gem::Requirement
-    none: false
-    requirements:
-    - - ~>
-      - !ruby/object:Gem::Version
-        version: '3.0'
-  type: :runtime
-  prerelease: false
-  version_requirements: !ruby/object:Gem::Requirement
-    none: false
-    requirements:
-    - - ~>
-      - !ruby/object:Gem::Version
-        version: '3.0'
-- !ruby/object:Gem::Dependency
-  name: jeweler
-  requirement: !ruby/object:Gem::Requirement
-    none: false
-    requirements:
-    - - ~>
-      - !ruby/object:Gem::Version
-        version: '1.8'
-  type: :runtime
-  prerelease: false
-  version_requirements: !ruby/object:Gem::Requirement
-    none: false
-    requirements:
-    - - ~>
-      - !ruby/object:Gem::Version
-        version: '1.8'
-description: Scientific names parser/atomizer with cached distributed storage of atomized
-  data
-email: dmozzherin@gmail.com
-executables:
-- parsley-store
+date: 2013-12-18 00:00:00.000000000 Z
+dependencies: []
+description: Scientific Names Parser with Cached Results
+email:
+- dmozzherin@gmail.com
+executables: []
 extensions: []
-extra_rdoc_files:
-- LICENSE
-- README.rdoc
+extra_rdoc_files: []
 files:
 - .document
-- .rvmrc
+- .gitignore
+- .ruby-version
 - CHANGELOG
 - Gemfile
 - Gemfile.lock
 - LICENSE
-- README.rdoc
+- README.dm
 - Rakefile
-- VERSION
-- bin/parsley-store
 - features/parsley-store.feature
 - features/step_definitions/parsley-store_steps.rb
 - features/support/env.rb
 - features/support/helper.rb
 - lib/parsley-store.rb
+- lib/parsley-store/version.rb
 - spec/parsley-store_spec.rb
 - spec/spec.opts
 - spec/spec_helper.rb
-homepage: http://github.com/GlobalNamesArchitecture/parsley-store
-licenses: []
+homepage: https://github.com/GlobalNamesArchitecture/parsley-store
+licenses:
+- MIT
+metadata: {}
 post_install_message: 
 rdoc_options: []
 require_paths:
 - lib
 required_ruby_version: !ruby/object:Gem::Requirement
-  none: false
   requirements:
-  - - ! '>='
+  - - '>='
     - !ruby/object:Gem::Version
       version: '0'
-      segments:
-      - 0
-      hash: -627591492272483572
 required_rubygems_version: !ruby/object:Gem::Requirement
-  none: false
   requirements:
-  - - ! '>='
+  - - '>='
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 1.8.25
+rubygems_version: 2.0.14
 signing_key: 
-specification_version: 3
-summary: Scientific Names Parser with Cached Results
-test_files: []
+specification_version: 4
+summary: Scientific names parser/atomizer with cached distributed storage of atomized
+  data
+test_files:
+- features/parsley-store.feature
+- features/step_definitions/parsley-store_steps.rb
+- features/support/env.rb
+- features/support/helper.rb
+- spec/parsley-store_spec.rb
+- spec/spec.opts
+- spec/spec_helper.rb

data/.rvmrc

@@ -1,2 +0,0 @@
-rvm use ruby-1.9.3-p392@parsley_store --create
-

data/README.rdoc

@@ -1,36 +0,0 @@
-= parsley-store
-
-This gem allows to dramatically increase speed of 'parsing' scientific names. 
-It stores parsed strings in Redis database and does not repeat work already done
-
-== Installation
-  
-  Make sure you have Redis installed on your localhost
-
-  gem install parsley-store
-
-== Usage
-
-  parser = ParsleyStore.new
-  parser.parse('Homo sapiens sapiens Linn. 1758')
-  parser.parse('Homo sapiens sapiens Linn. 1758')
-
-The second parse must be much faster!
-
-To get only canonical name:
-
-  parser.parse('Homo sapiens sapiens Linn. 1758', :canonical_only => true)
-
-== Note on Patches/Pull Requests
- 
-* Fork the project.
-* Make your feature addition or bug fix.
-* Add tests for it. This is important so I don't break it in a
-  future version unintentionally.
-* Commit, do not mess with rakefile, version, or history.
-  (if you want to have your own version, that is fine but bump version in a commit by itself I can ignore when I pull)
-* Send me a pull request. Bonus points for topic branches.
-
-== Copyright
-
-Copyright (c) 2010 Dmitry Mozzherin. See LICENSE for details.

data/VERSION

@@ -1 +0,0 @@
-0.3.2

data/bin/parsley-store

@@ -1,3 +0,0 @@
-#!/usr/bin/env ruby
-
-puts 'it will be command line interface to configure and operate parsley store'