parse_fasta 1.9.0 → 1.9.1

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data/README.md

@@ -66,6 +66,11 @@ Read fasta file into a hash.
 
 ## Versions ##
 
+### 1.9.1 ###
+
+Speed up fastQ `each_record` and `each_record_fast`. Courtesy of
+[Matthew Ralston](https://github.com/MatthewRalston).
+
 ### 1.9.0 ###
 
 Added "fast" versions of `each_record` methods

data/lib/parse_fasta/fastq_file.rb

@@ -78,7 +78,7 @@ class FastqFile < File
     f.each_line do |line|
       line.chomp!
 
-      case count % 4
+      case count
       when 0
         header = line[1..-1]
       when 1
@@ -86,6 +86,7 @@ class FastqFile < File
       when 2
         description = line[1..-1]
       when 3
+        count = -1
         quality = Quality.new(line)
         yield(header, sequence, description, quality)
       end
@@ -137,7 +138,7 @@ class FastqFile < File
     f.each_line do |line|
       line.chomp!
 
-      case count % 4
+      case count
       when 0
         header = line[1..-1]
       when 1
@@ -145,6 +146,7 @@ class FastqFile < File
       when 2
         description = line[1..-1]
       when 3
+        count = -1
         quality = line
         yield(header, sequence, description, quality)
       end

data/lib/parse_fasta/version.rb

@@ -17,5 +17,5 @@
 # along with parse_fasta.  If not, see <http://www.gnu.org/licenses/>.
 
 module ParseFasta
-  VERSION = "1.9.0"
+  VERSION = "1.9.1"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: parse_fasta
 version: !ruby/object:Gem::Version
-  version: 1.9.0
+  version: 1.9.1
 platform: ruby
 authors:
 - Ryan Moore
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2016-04-16 00:00:00.000000000 Z
+date: 2016-04-20 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler