orthanc 0.1.0 → 0.1.1
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- checksums.yaml +4 -4
- data/README.md +12 -10
- data/lib/orthanc/client.rb +20 -17
- data/lib/orthanc/instances.rb +49 -49
- data/lib/orthanc/modalities.rb +12 -12
- data/lib/orthanc/patients.rb +28 -28
- data/lib/orthanc/peers.rb +7 -7
- data/lib/orthanc/plugins.rb +5 -5
- data/lib/orthanc/series.rb +27 -27
- data/lib/orthanc/studies.rb +28 -28
- data/lib/orthanc/tools.rb +6 -6
- data/lib/orthanc/version.rb +1 -1
- metadata +2 -2
checksums.yaml
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@@ -1,7 +1,7 @@
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---
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SHA1:
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metadata.gz:
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data.tar.gz:
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metadata.gz: cd7892469761f2610ebec1e93d457212a0231f4a
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data.tar.gz: 6b5a8cbd7aac358337ca577e914997479473d97a
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 1c6b7a5e8a156cf63bc64e80847d5f319dd3c9a197aec2622d49223feb451d2765d12d2a6e4410959c8815387bcaba61004ae77144a914701054a8ff0c257a50
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data.tar.gz: 3541b04589e433c39e98cc8c56b1490efa2e843d98bc92e5b329d8cd6516eeb69b59afb3ef8d2ba88ce6694539894d60c9fb827ffd47195799a111a776d18208
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data/README.md
CHANGED
@@ -8,6 +8,8 @@
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## Installation
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**NOTE:** If you need an instance of Orthanc to test against, you can build a ready-to-use Orthanc server VM with the [orthanc-vagrant](https://github.com/chafey/orthanc-vagrant) project.
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Add this line to your application's Gemfile:
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```ruby
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@@ -25,19 +27,19 @@ Or install it yourself as:
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## Usage
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The gem tries to follow the Orthanc API naming scheme as closely as possible, converting methods and response items to snake case to make the experience more ruby-like.
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-
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-
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-
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-
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-
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api=Orthanc::Client.new("localhost", "8042")
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api.all_patients
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api.all_patients.first
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api.system.database_version => 5
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api.statistics.count_studies => 14
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You get the picture.
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-
You
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You can see what Orthanc API resources have been mapped in the gem, and their status [here](https://docs.google.com/spreadsheets/d/1KWQHNGS-NEYppo3XW4TkNbZYk_AraPhWOmSwxcsScvU/edit?usp=sharing)
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-
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Basic documentation can be found in [here](http://www.rubydoc.info/github/simonmd/orthanc-ruby/master/Orthanc/Client)
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-
After checking out the repo, run `bin/setup` to install dependencies. Then, run `bin/console` for an interactive prompt that will allow you to experiment.
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-
To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release` to create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).
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## Contributing
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@@ -49,4 +51,4 @@ To install this gem onto your local machine, run `bundle exec rake install`. To
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## License
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-
MIT License
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MIT License
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data/lib/orthanc/client.rb
CHANGED
@@ -18,27 +18,27 @@ module Orthanc
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# ------------- General -------------
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def system
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-
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+
handle_response(base_uri["system"].get)
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end
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def statistics
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-
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handle_response(base_uri["statistics"].get)
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end
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def changes(params = {}) # "last", "limit" and "since" arguments
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-
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handle_response(base_uri["changes"].get({params: params}))
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end
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def delete_changes(params = {}) # "last", "limit" and "since" arguments
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-
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handle_response(base_uri["changes"].delete({params: params}))
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end
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def exports(params = {}) # "last", "limit" and "since" arguments
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-
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handle_response(base_uri["exports"].get({params: params}))
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end
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def delete_exports(params = {}) # "last", "limit" and "since" arguments
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-
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handle_response(base_uri["exports"].delete({params: params}))
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end
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@@ -54,19 +54,22 @@ module Orthanc
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return true if num == "1"
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end
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def
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-
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-
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def handle_response(response)
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begin
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# Try to parse response
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parsed_response = JSON.parse(response)
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if parsed_response.class == Array
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return parsed_response
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elsif parsed_response.class == Hash
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return RecursiveOpenStruct.new(parsed_response.to_snake_keys, recurse_over_arrays: true )
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else
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return response
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end
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rescue JSON::ParserError => e # If JSON parse fails, return original response
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return response
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end
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end
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end
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-
end
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end
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data/lib/orthanc/instances.rb
CHANGED
@@ -4,220 +4,220 @@ module Orthanc
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4
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# GET /instances
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def all_instances
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7
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-
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7
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handle_response(base_uri["instances"].get)
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end
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# POST /instances
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def instances(dicom_file) # POST = Add the new DICOM file given in the POST body
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12
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-
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handle_response(base_uri["instances"].post(dicom_file))
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end
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# GET /instances/{id}
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def instance(id)
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-
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handle_response(base_uri["instances/#{id}"].get)
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end
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# DELETE /instances/{id}
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def delete_instance(id)
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-
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handle_response(base_uri["instances/#{id}"].delete)
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end
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# POST /instances/{id}/anonymize
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def anonymize_instance(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
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-
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+
base_uri["instances/#{id}/anonymize"].post(payload.to_s)
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end
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# GET /instances/{id}/content/
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def instance_content(id) # List the first-level DICOM tags
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-
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handle_response(base_uri["instances/#{id}/frames"].get)
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end
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# GET /instances/{id}/content/{group}-{element}
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def instance_content_tag(id, group, element) # Raw access to the value of DICOM tags (comprising the padding character)
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-
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handle_response(base_uri["instances/#{id}/content/#{group}-#{element}"].get)
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end
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# GET /instances/{id}/content/{group}-{element}/{index}/...
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def instance_content_sequence(id, group, element, index) # Raw access to the content of DICOM sequences
|
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-
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handle_response(base_uri["instances/#{id}/content/#{group}-#{element}/#{index}"].get)
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end
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# POST /instances/{id}/export
|
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-
def instance_export(id) # Write the DICOM file in the filesystem where Orthanc is running
|
47
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-
|
48
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-
end
|
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+
def instance_export(id, payload = {}) # Write the DICOM file in the filesystem where Orthanc is running
|
47
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+
base_uri["instances/#{id}/export"].post(payload)
|
48
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+
end
|
49
49
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|
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# GET /instances/{id}/file
|
51
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def instance_file(id)
|
52
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-
|
53
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-
end
|
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+
base_uri["instances/#{id}/file"].get
|
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+
end
|
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54
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|
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# GET /instances/{id}/frames
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def instance_frames(id) # Instance frames array
|
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-
|
58
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-
end
|
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handle_response(base_uri["instances/#{id}/frames"].get)
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+
end
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# GET /instances/{id}/frames/{frameNumber}/image-int16
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def instance_frame_image_int16(id, frame_number) # Truncated image to the [-32768;32767] range
|
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-
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+
base_uri["instances/#{id}/frames/#{frame_number}/image-int16"].get
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end
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# GET /instances/{id}/frames/{frameNumber}/image-uint16
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def instance_frame_image_uint16(id, frame_number) # Truncated image to the [0;65535] range
|
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-
|
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+
base_uri["instances/#{id}/frames/#{frame_number}/image-uint16"].get
|
68
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end
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# GET /instances/{id}/frames/{frameNumber}/image-uint8
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def instance_frame_image_uint8(id, frame_number) # Truncated image to the [0;255] range
|
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-
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+
base_uri["instances/#{id}/frames/#{frame_number}/image-uint8"].get
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end
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# GET /instances/{id}/frames/{frameNumber}/matlab
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def instance_frame_matlab(id, frame_number) # a = eval(urlread('http://localhost:8042/instances/.../matlab'))
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-
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+
base_uri["instances/#{id}/frames/#{frame_number}/matlab"].get
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end
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# GET /instances/{id}/frames/{frameNumber}/preview
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def instance_preview(id, frame_number) # Rescaled image (so that all the range [0;255] is used)
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-
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+
base_uri["instances/#{id}/frames/#{frame_number}/preview"].get
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end
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# GET /instances/{id}/image-int16
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def instance_image_int16(id) # Truncated image to the [-32768;32767] range
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-
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+
base_uri["instances/#{id}/image-int16"].get
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end
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# GET /instances/{id}/image-uint16
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def instance_image_uint16(id) # Truncated image to the [0;65535] range
|
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-
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+
base_uri["instances/#{id}/image-uint16"].get
|
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end
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# GET /instances/{id}/image-uint8
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def instance_image_uint8(id) # Truncated image to the [0;255] range
|
97
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-
|
97
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+
base_uri["instances/#{id}/image-uint8"].get
|
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end
|
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# GET /instances/{id}/matlab
|
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def instance_matlab(id) # a = eval(urlread('http://localhost:8042/instances/.../matlab'))
|
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-
|
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+
base_uri["instances/#{id}/matlab"].get
|
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end
|
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# POST /instances/{id}/modify
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def modify_instance(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
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-
|
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+
base_uri["instances/#{id}/modify"].post(payload.to_s)
|
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|
end
|
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# GET /instances/{id}/module
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def instance_module(id)
|
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-
|
112
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+
handle_response(base_uri["instances/#{id}/module"].get)
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end
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# GET /instances/{id}/patient
|
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def instance_patient(id)
|
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-
|
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+
handle_response(base_uri["instances/#{id}/patient"].get)
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end
|
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119
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# GET /instances/{id}/preview
|
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def instance_preview(id) # Rescaled image (so that all the range [0;255] is used)
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-
|
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+
handle_response(base_uri["instances/#{id}/preview"].get)
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end
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# GET /instances/{id}/series
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def instance_series(id)
|
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-
|
127
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+
handle_response(base_uri["instances/#{id}/series"].get)
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end
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129
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130
130
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# GET /instances/{id}/simplified-tags
|
131
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-
def
|
132
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-
|
131
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+
def instance_simplified_tags(id) # "?simplify" argument to simplify output
|
132
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+
handle_response(base_uri["instances/#{id}/simplified-tags"].get)
|
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133
|
end
|
134
134
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|
135
135
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# GET /instances/{id}/statistics
|
136
136
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def instance_statistics(id)
|
137
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-
|
137
|
+
handle_response(base_uri["instances/#{id}/statistics"].get)
|
138
138
|
end
|
139
139
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|
140
140
|
# GET /instances/{id}/study
|
141
141
|
def instance_study(id)
|
142
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-
|
142
|
+
handle_response(base_uri["instances/#{id}/study"].get)
|
143
143
|
end
|
144
144
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|
145
145
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# GET /instances/{id}/tags
|
146
146
|
def instance_tags(id) # TODO: "?simplify" argument to simplify output (same as "simplified-tags")
|
147
|
-
|
147
|
+
handle_response(base_uri["instances/#{id}/tags"].get)
|
148
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|
end
|
149
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|
150
150
|
# TODO: Polymorphic resourceType resources. Repetitive. must refactor
|
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152
152
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# GET /{resourceType}/{id}/attachments
|
153
153
|
def instance_attachments(id)
|
154
|
-
|
154
|
+
handle_response(base_uri["instances/#{id}/attachments"].get)
|
155
155
|
end
|
156
156
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|
157
157
|
# DELETE /{resourceType}/{id}/attachments/{name}
|
158
158
|
def delete_instance_attachment(id, name)
|
159
|
-
|
159
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}"].delete)
|
160
160
|
end
|
161
161
|
|
162
162
|
# PUT /{resourceType}/{id}/attachments/{name}
|
163
163
|
def instance_attachment(id, name, payload = {})
|
164
|
-
|
164
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}"].put(payload))
|
165
165
|
end
|
166
166
|
|
167
167
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-data
|
168
168
|
def instance_attachment_compressed_data(id, name)
|
169
|
-
|
169
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/compressed-data"].get)
|
170
170
|
end
|
171
171
|
|
172
172
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-md5
|
173
173
|
def instance_attachment_compressed_md5(id, name)
|
174
|
-
|
174
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/compressed-md5"].get)
|
175
175
|
end
|
176
176
|
|
177
177
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-size
|
178
178
|
def instance_attachment_compressed_size(id, name)
|
179
|
-
|
179
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/compressed-size"].get)
|
180
180
|
end
|
181
181
|
|
182
182
|
# GET /{resourceType}/{id}/attachments/{name}/data
|
183
183
|
def instance_attachment_data(id, name)
|
184
|
-
|
184
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/data"].get)
|
185
185
|
end
|
186
186
|
|
187
187
|
# GET /{resourceType}/{id}/attachments/{name}/md5
|
188
188
|
def instance_attachment_md5(id, name)
|
189
|
-
|
189
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/md5"].get)
|
190
190
|
end
|
191
191
|
|
192
192
|
# GET /{resourceType}/{id}/attachments/{name}/size
|
193
193
|
def instance_attachment_size(id, name)
|
194
|
-
|
194
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/size"].get)
|
195
195
|
end
|
196
196
|
|
197
197
|
# POST /{resourceType}/{id}/attachments/{name}/verify-md5
|
198
198
|
def instance_attachment_verify_md5(id, name)
|
199
|
-
|
199
|
+
handle_response(base_uri["instances/#{id}/attachments/#{name}/verify-md5"].get)
|
200
200
|
end
|
201
201
|
|
202
202
|
# GET /{resourceType}/{id}/metadata
|
203
203
|
def instance_all_metadata(id)
|
204
|
-
|
204
|
+
handle_response(base_uri["instances/#{id}/metadata"].get)
|
205
205
|
end
|
206
206
|
|
207
207
|
# GET /{resourceType}/{id}/metadata/{name}
|
208
208
|
def instance_metadata(id, name)
|
209
|
-
|
209
|
+
handle_response(base_uri["instances/#{id}/metadata/#{name}"].get)
|
210
210
|
end
|
211
211
|
|
212
212
|
# DELETE /{resourceType}/{id}/metadata/{name}
|
213
213
|
def instance_delete_metadata(id, name)
|
214
|
-
|
214
|
+
handle_response(base_uri["instances/#{id}/metadata/#{name}"].delete)
|
215
215
|
end
|
216
216
|
|
217
217
|
# PUT /{resourceType}/{id}/metadata/{name}
|
218
218
|
def instance_update_metadata(id, name, payload = {})
|
219
|
-
|
219
|
+
handle_response(base_uri["instances/#{id}/metadata/#{name}"].put(payload))
|
220
220
|
end
|
221
221
|
|
222
222
|
end
|
223
|
-
end
|
223
|
+
end
|
data/lib/orthanc/modalities.rb
CHANGED
@@ -3,53 +3,53 @@ module Orthanc
|
|
3
3
|
# ------------- Modalities -------------
|
4
4
|
# GET /modalities
|
5
5
|
def modalities
|
6
|
-
|
6
|
+
handle_response(base_uri["modalities"].get)
|
7
7
|
end
|
8
8
|
|
9
9
|
# GET /modalities/{dicom}
|
10
10
|
def modality(dicom)
|
11
|
-
|
11
|
+
handle_response(base_uri["modalities/#{dicom}"].get)
|
12
12
|
end
|
13
13
|
|
14
14
|
# DELETE /modalities/{dicom}
|
15
15
|
def delete_modality(dicom)
|
16
|
-
|
16
|
+
handle_response(base_uri["modalities/#{dicom}"].delete)
|
17
17
|
end
|
18
18
|
|
19
19
|
# PUT /modalities/{dicom}
|
20
|
-
def modify_modality(dicom)
|
21
|
-
|
20
|
+
def modify_modality(dicom, payload = {})
|
21
|
+
handle_response(base_uri["modalities/#{dicom}"].put(payload))
|
22
22
|
end
|
23
23
|
|
24
24
|
# POST /modalities/{dicom}/echo
|
25
25
|
def modality_echo(dicom, payload = {}) # C-Echo SCU
|
26
|
-
|
26
|
+
handle_response(base_uri["modalities/#{dicom}/echo"].post(payload))
|
27
27
|
end
|
28
28
|
|
29
29
|
# POST /modalities/{dicom}/find
|
30
30
|
def modality_find(dicom, payload = {})
|
31
|
-
|
31
|
+
handle_response(base_uri["modalities/#{dicom}/find"].post(payload))
|
32
32
|
end
|
33
33
|
|
34
34
|
# POST /modalities/{dicom}/find-patient
|
35
35
|
def modality_find_patient(dicom, payload = {})
|
36
|
-
|
36
|
+
handle_response(base_uri["modalities/#{dicom}/find-patient"].post(payload))
|
37
37
|
end
|
38
38
|
|
39
39
|
# POST /modalities/{dicom}/find-series
|
40
40
|
def modality_find_series(dicom, payload = {})
|
41
|
-
|
41
|
+
handle_response(base_uri["modalities/#{dicom}/find-series"].post(payload))
|
42
42
|
end
|
43
43
|
|
44
44
|
# POST /modalities/{dicom}/find-study
|
45
45
|
def modality_find_study(dicom, payload = {})
|
46
|
-
|
46
|
+
handle_response(base_uri["modalities/#{dicom}/find-study"].post(payload))
|
47
47
|
end
|
48
48
|
|
49
49
|
# POST /modalities/{dicom}/store
|
50
50
|
def modality_store(dicom, payload = {}) # POST body = UUID series, UUID instance, or raw DICOM file
|
51
|
-
|
51
|
+
handle_response(base_uri["modalities/#{dicom}/store"].post(payload))
|
52
52
|
end
|
53
53
|
|
54
54
|
end
|
55
|
-
end
|
55
|
+
end
|
data/lib/orthanc/patients.rb
CHANGED
@@ -3,22 +3,22 @@ module Orthanc
|
|
3
3
|
# ------------- Patients -------------
|
4
4
|
# GET /patients
|
5
5
|
def all_patients
|
6
|
-
|
6
|
+
handle_response(base_uri["patients"].get)
|
7
7
|
end
|
8
8
|
|
9
9
|
# GET /patients/{id}
|
10
10
|
def patient(id)
|
11
|
-
|
11
|
+
handle_response(base_uri["patients/#{id}"].get)
|
12
12
|
end
|
13
13
|
|
14
|
-
# DELETE /patients/{id}
|
14
|
+
# DELETE /patients/{id}
|
15
15
|
def delete_patient(id)
|
16
|
-
|
16
|
+
handle_response(base_uri["patients/#{id}"].delete)
|
17
17
|
end
|
18
18
|
|
19
19
|
# POST /patients/{id}/anonymize
|
20
20
|
def anonymize_patient(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
21
|
-
|
21
|
+
handle_response(base_uri["patients/#{id}/anonymize"].post(payload.to_s))
|
22
22
|
end
|
23
23
|
|
24
24
|
# GET /patients/{id}/archive
|
@@ -28,7 +28,7 @@ module Orthanc
|
|
28
28
|
|
29
29
|
# GET /patients/{id}/instances
|
30
30
|
def patient_instances(id) # Retrieve all the instances of this patient in a single REST call
|
31
|
-
|
31
|
+
handle_response(base_uri["patients/#{id}/instances"].get)
|
32
32
|
end
|
33
33
|
|
34
34
|
# GET /patients/{id}/media
|
@@ -38,12 +38,12 @@ module Orthanc
|
|
38
38
|
|
39
39
|
# POST /patients/{id}/modify
|
40
40
|
def modify_patient(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
41
|
-
|
41
|
+
handle_response(base_uri["patients/#{id}/modify"].post(payload.to_s))
|
42
42
|
end
|
43
43
|
|
44
44
|
# GET /patients/{id}/module
|
45
45
|
def patient_module(id)
|
46
|
-
|
46
|
+
handle_response(base_uri["patients/#{id}/module"].get)
|
47
47
|
end
|
48
48
|
|
49
49
|
# GET /patients/{id}/protected
|
@@ -60,95 +60,95 @@ module Orthanc
|
|
60
60
|
|
61
61
|
# GET /patients/{id}/series
|
62
62
|
def patient_series(id) # Retrieve all the series of this patient in a single REST call
|
63
|
-
|
63
|
+
handle_response(base_uri["patients/#{id}/series"].get)
|
64
64
|
end
|
65
65
|
|
66
66
|
# GET /patients/{id}/shared-tags
|
67
67
|
def patient_shared_tags(id) # "?simplify" argument to simplify output
|
68
|
-
|
68
|
+
handle_response(base_uri["patients/#{id}/shared-tags"].get)
|
69
69
|
end
|
70
70
|
|
71
71
|
# GET /patients/{id}/statistics
|
72
72
|
def patient_statistics(id)
|
73
|
-
|
73
|
+
handle_response(base_uri["patients/#{id}/statistics"].get)
|
74
74
|
end
|
75
75
|
|
76
76
|
# GET /patients/{id}/studies
|
77
77
|
def patient_studies(id) # Retrieve all the studies of this patient in a single REST call
|
78
|
-
|
78
|
+
handle_response(base_uri["patients/#{id}/studies"].get)
|
79
79
|
end
|
80
80
|
|
81
81
|
# TODO: Polymorphic resourceType resources. Repetitive. must refactor
|
82
82
|
|
83
83
|
# GET /{resourceType}/{id}/attachments
|
84
84
|
def patient_attachments(id)
|
85
|
-
|
85
|
+
handle_response(base_uri["patients/#{id}/attachments"].get)
|
86
86
|
end
|
87
87
|
|
88
88
|
# DELETE /{resourceType}/{id}/attachments/{name}
|
89
89
|
def delete_patient_attachment(id, name)
|
90
|
-
|
90
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}"].delete)
|
91
91
|
end
|
92
92
|
|
93
93
|
# PUT /{resourceType}/{id}/attachments/{name}
|
94
94
|
def patient_attachment(id, name, payload = {})
|
95
|
-
|
95
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}"].put(payload))
|
96
96
|
end
|
97
97
|
|
98
98
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-data
|
99
99
|
def patient_attachment_compressed_data(id, name)
|
100
|
-
|
100
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/compressed-data"].get)
|
101
101
|
end
|
102
102
|
|
103
103
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-md5
|
104
104
|
def patient_attachment_compressed_md5(id, name)
|
105
|
-
|
105
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/compressed-md5"].get)
|
106
106
|
end
|
107
107
|
|
108
108
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-size
|
109
109
|
def patient_attachment_compressed_size(id, name)
|
110
|
-
|
110
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/compressed-size"].get)
|
111
111
|
end
|
112
112
|
|
113
113
|
# GET /{resourceType}/{id}/attachments/{name}/data
|
114
114
|
def patient_attachment_data(id, name)
|
115
|
-
|
115
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/data"].get)
|
116
116
|
end
|
117
117
|
|
118
118
|
# GET /{resourceType}/{id}/attachments/{name}/md5
|
119
119
|
def patient_attachment_md5(id, name)
|
120
|
-
|
120
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/md5"].get)
|
121
121
|
end
|
122
122
|
|
123
123
|
# GET /{resourceType}/{id}/attachments/{name}/size
|
124
124
|
def patient_attachment_size(id, name)
|
125
|
-
|
125
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/size"].get)
|
126
126
|
end
|
127
127
|
|
128
128
|
# POST /{resourceType}/{id}/attachments/{name}/verify-md5
|
129
129
|
def patient_attachment_verify_md5(id, name)
|
130
|
-
|
130
|
+
handle_response(base_uri["patients/#{id}/attachments/#{name}/verify-md5"].get)
|
131
131
|
end
|
132
132
|
|
133
133
|
# GET /{resourceType}/{id}/metadata
|
134
134
|
def patient_all_metadata(id)
|
135
|
-
|
135
|
+
handle_response(base_uri["patients/#{id}/metadata"].get)
|
136
136
|
end
|
137
137
|
|
138
138
|
# GET /{resourceType}/{id}/metadata/{name}
|
139
139
|
def patient_metadata(id, name)
|
140
|
-
|
140
|
+
handle_response(base_uri["patients/#{id}/metadata/#{name}"].get)
|
141
141
|
end
|
142
142
|
|
143
143
|
# DELETE /{resourceType}/{id}/metadata/{name}
|
144
144
|
def patient_delete_metadata(id, name)
|
145
|
-
|
145
|
+
handle_response(base_uri["patients/#{id}/metadata/#{name}"].delete)
|
146
146
|
end
|
147
147
|
|
148
148
|
# PUT /{resourceType}/{id}/metadata/{name}
|
149
149
|
def patient_update_metadata(id, name, payload = {})
|
150
|
-
|
150
|
+
handle_response(base_uri["patients/#{id}/metadata/#{name}"].put(payload))
|
151
151
|
end
|
152
|
-
|
152
|
+
|
153
153
|
end
|
154
|
-
end
|
154
|
+
end
|
data/lib/orthanc/peers.rb
CHANGED
@@ -3,28 +3,28 @@ module Orthanc
|
|
3
3
|
# ------------- Peers -------------
|
4
4
|
# GET /peers
|
5
5
|
def peers # Get the list of all the registered plugins
|
6
|
-
|
6
|
+
handle_response(base_uri["peers"].get)
|
7
7
|
end
|
8
8
|
|
9
9
|
# GET /peers/{peer}
|
10
10
|
def peer(peer)
|
11
|
-
|
11
|
+
handle_response(base_uri["peers/#{peer}"].get)
|
12
12
|
end
|
13
13
|
|
14
14
|
# DELETE /peers/{peer}
|
15
15
|
def delete_peer(peer)
|
16
|
-
|
16
|
+
handle_response(base_uri["peers/#{peer}"].delete)
|
17
17
|
end
|
18
18
|
|
19
19
|
# PUT /peers/{peer}
|
20
20
|
def modify_peer(peer, payload = {})
|
21
|
-
|
21
|
+
handle_response(base_uri["peers/#{peer}"].put(payload))
|
22
22
|
end
|
23
23
|
|
24
24
|
# GET /peers/{peer}/store
|
25
25
|
def peer_store(peer, payload = {}) # POST body = UUID series, UUID instance, or raw DICOM file
|
26
|
-
|
27
|
-
end
|
26
|
+
handle_response(base_uri["peers/#{peer}/store"].post(payload))
|
27
|
+
end
|
28
28
|
|
29
29
|
end
|
30
|
-
end
|
30
|
+
end
|
data/lib/orthanc/plugins.rb
CHANGED
@@ -3,18 +3,18 @@ module Orthanc
|
|
3
3
|
# ------------- Plugins -------------
|
4
4
|
# GET /plugins
|
5
5
|
def plugins # Get the list of all the registered plugins
|
6
|
-
|
6
|
+
handle_response(base_uri["plugins"].get)
|
7
7
|
end
|
8
8
|
|
9
9
|
# GET /plugins/explorer.js
|
10
10
|
def plugins_explorerjs # Get the JavaScript code that is injected by plugins into Orthanc Explorer
|
11
|
-
|
11
|
+
handle_response(base_uri["plugins/explorer.js"].get)
|
12
12
|
end
|
13
13
|
|
14
14
|
# GET /plugins/{id}
|
15
15
|
def plugin(id) # Get information about some plugin
|
16
|
-
|
17
|
-
end
|
16
|
+
handle_response(base_uri["plugins/#{id}"].get)
|
17
|
+
end
|
18
18
|
|
19
19
|
end
|
20
|
-
end
|
20
|
+
end
|
data/lib/orthanc/series.rb
CHANGED
@@ -3,22 +3,22 @@ module Orthanc
|
|
3
3
|
# ------------- Series -------------
|
4
4
|
# GET /series
|
5
5
|
def all_series # Darn DICOM, why did you have to call them something that's spelled the same singular and plural?
|
6
|
-
|
6
|
+
handle_response(base_uri["series"].get)
|
7
7
|
end
|
8
8
|
|
9
9
|
# GET /series/{id}
|
10
10
|
def series(id)
|
11
|
-
|
11
|
+
handle_response(base_uri["series/#{id}"].get)
|
12
12
|
end
|
13
13
|
|
14
14
|
# DELETE /series/{id}
|
15
15
|
def delete_series(id)
|
16
|
-
|
16
|
+
handle_response(base_uri["series/#{id}"].delete)
|
17
17
|
end
|
18
18
|
|
19
19
|
# POST /series/{id}/anonymize
|
20
20
|
def anonymize_series(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
21
|
-
|
21
|
+
handle_response(base_uri["series/#{id}/anonymize"].post(payload.to_s))
|
22
22
|
end
|
23
23
|
|
24
24
|
# GET /series/{id}/archive
|
@@ -28,7 +28,7 @@ module Orthanc
|
|
28
28
|
|
29
29
|
# GET /series/{id}/instances
|
30
30
|
def series_instances(id) # Retrieve all the instances of this patient in a single REST call
|
31
|
-
|
31
|
+
handle_response(base_uri["series/#{id}/instances"].get)
|
32
32
|
end
|
33
33
|
|
34
34
|
# GET /series/{id}/media
|
@@ -38,105 +38,105 @@ module Orthanc
|
|
38
38
|
|
39
39
|
# POST /series/{id}/modify
|
40
40
|
def modify_series(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
41
|
-
|
41
|
+
handle_response(base_uri["series/#{id}/modify"].post(payload.to_s))
|
42
42
|
end
|
43
43
|
|
44
44
|
# GET /series/{id}/module
|
45
45
|
def series_module(id)
|
46
|
-
|
46
|
+
handle_response(base_uri["series/#{id}/module"].get)
|
47
47
|
end
|
48
48
|
|
49
49
|
# GET /series/{id}/patient
|
50
50
|
def series_patient(id)
|
51
|
-
|
51
|
+
handle_response(base_uri["series/#{id}/patient"].get)
|
52
52
|
end
|
53
53
|
|
54
54
|
# GET /series/{id}/shared-tags
|
55
55
|
def series_shared_tags(id) # "?simplify" argument to simplify output
|
56
|
-
|
56
|
+
handle_response(base_uri["series/#{id}/shared-tags"].get)
|
57
57
|
end
|
58
58
|
|
59
59
|
# GET /series/{id}/statistics
|
60
60
|
def series_statistics(id)
|
61
|
-
|
61
|
+
handle_response(base_uri["series/#{id}/statistics"].get)
|
62
62
|
end
|
63
63
|
|
64
64
|
# GET /series/{id}/study
|
65
65
|
def series_study(id)
|
66
|
-
|
66
|
+
handle_response(base_uri["series/#{id}/study"].get)
|
67
67
|
end
|
68
68
|
|
69
69
|
# TODO: Polymorphic resourceType resources. Repetitive. must refactor
|
70
70
|
|
71
71
|
# GET /{resourceType}/{id}/attachments
|
72
72
|
def series_attachments(id)
|
73
|
-
|
73
|
+
handle_response(base_uri["series/#{id}/attachments"].get)
|
74
74
|
end
|
75
75
|
|
76
76
|
# DELETE /{resourceType}/{id}/attachments/{name}
|
77
77
|
def delete_series_attachment(id, name)
|
78
|
-
|
78
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}"].delete)
|
79
79
|
end
|
80
80
|
|
81
81
|
# PUT /{resourceType}/{id}/attachments/{name}
|
82
82
|
def series_attachment(id, name, payload = {})
|
83
|
-
|
83
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}"].put(payload))
|
84
84
|
end
|
85
85
|
|
86
86
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-data
|
87
87
|
def series_attachment_compressed_data(id, name)
|
88
|
-
|
88
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/compressed-data"].get)
|
89
89
|
end
|
90
90
|
|
91
91
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-md5
|
92
92
|
def series_attachment_compressed_md5(id, name)
|
93
|
-
|
93
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/compressed-md5"].get)
|
94
94
|
end
|
95
95
|
|
96
96
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-size
|
97
97
|
def series_attachment_compressed_size(id, name)
|
98
|
-
|
98
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/compressed-size"].get)
|
99
99
|
end
|
100
100
|
|
101
101
|
# GET /{resourceType}/{id}/attachments/{name}/data
|
102
102
|
def series_attachment_data(id, name)
|
103
|
-
|
103
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/data"].get)
|
104
104
|
end
|
105
105
|
|
106
106
|
# GET /{resourceType}/{id}/attachments/{name}/md5
|
107
107
|
def series_attachment_md5(id, name)
|
108
|
-
|
108
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/md5"].get)
|
109
109
|
end
|
110
110
|
|
111
111
|
# GET /{resourceType}/{id}/attachments/{name}/size
|
112
112
|
def series_attachment_size(id, name)
|
113
|
-
|
113
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/size"].get)
|
114
114
|
end
|
115
115
|
|
116
116
|
# POST /{resourceType}/{id}/attachments/{name}/verify-md5
|
117
117
|
def series_attachment_verify_md5(id, name)
|
118
|
-
|
118
|
+
handle_response(base_uri["series/#{id}/attachments/#{name}/verify-md5"].get)
|
119
119
|
end
|
120
120
|
|
121
121
|
# GET /{resourceType}/{id}/metadata
|
122
122
|
def series_all_metadata(id)
|
123
|
-
|
123
|
+
handle_response(base_uri["series/#{id}/metadata"].get)
|
124
124
|
end
|
125
125
|
|
126
126
|
# GET /{resourceType}/{id}/metadata/{name}
|
127
127
|
def series_metadata(id, name)
|
128
|
-
|
128
|
+
handle_response(base_uri["series/#{id}/metadata/#{name}"].get)
|
129
129
|
end
|
130
130
|
|
131
131
|
# DELETE /{resourceType}/{id}/metadata/{name}
|
132
132
|
def series_delete_metadata(id, name)
|
133
|
-
|
133
|
+
handle_response(base_uri["series/#{id}/metadata/#{name}"].delete)
|
134
134
|
end
|
135
135
|
|
136
136
|
# GET /{resourceType}/{id}/metadata/{name}
|
137
137
|
def series_update_metadata(id, name, payload = {})
|
138
|
-
|
138
|
+
handle_response(base_uri["series/#{id}/metadata/#{name}"].put(payload))
|
139
139
|
end
|
140
|
-
|
140
|
+
|
141
141
|
end
|
142
|
-
end
|
142
|
+
end
|
data/lib/orthanc/studies.rb
CHANGED
@@ -3,22 +3,22 @@ module Orthanc
|
|
3
3
|
# ------------- Studies -------------
|
4
4
|
# GET /studies
|
5
5
|
def all_studies
|
6
|
-
|
6
|
+
handle_response(base_uri["studies"].get)
|
7
7
|
end
|
8
8
|
|
9
9
|
# GET /studies/{id}
|
10
10
|
def study(id)
|
11
|
-
|
11
|
+
handle_response(base_uri["studies/#{id}"].get)
|
12
12
|
end
|
13
13
|
|
14
14
|
# DELETE /studies/{id}
|
15
15
|
def delete_study(id)
|
16
|
-
|
16
|
+
handle_response(base_uri["studies/#{id}"].delete)
|
17
17
|
end
|
18
18
|
|
19
19
|
# POST /studies/{id}/anonymize
|
20
20
|
def anonymize_study(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
21
|
-
|
21
|
+
handle_response(base_uri["studies/#{id}/anonymize"].post(payload.to_s))
|
22
22
|
end
|
23
23
|
|
24
24
|
# GET /studies/{id}/archive
|
@@ -28,7 +28,7 @@ module Orthanc
|
|
28
28
|
|
29
29
|
# GET /studies/{id}/instances
|
30
30
|
def study_instances(id) # Retrieve all the instances of this patient in a single REST call
|
31
|
-
|
31
|
+
handle_response(base_uri["studies/#{id}/instances"].get)
|
32
32
|
end
|
33
33
|
|
34
34
|
# GET /studies/{id}/media
|
@@ -38,110 +38,110 @@ module Orthanc
|
|
38
38
|
|
39
39
|
# POST /studies/{id}/modify
|
40
40
|
def modify_study(id, payload = {}) # https://code.google.com/p/orthanc/wiki/Anonymization
|
41
|
-
|
41
|
+
handle_response(base_uri["studies/#{id}/modify"].post(payload.to_s))
|
42
42
|
end
|
43
43
|
|
44
44
|
# GET /studies/{id}/module
|
45
45
|
def study_module(id)
|
46
|
-
|
46
|
+
handle_response(base_uri["studies/#{id}/module"].get)
|
47
47
|
end
|
48
48
|
|
49
49
|
# GET /studies/{id}/module-patient
|
50
50
|
def study_module_patient(id)
|
51
|
-
|
51
|
+
handle_response(base_uri["studies/#{id}/module-patient"].get)
|
52
52
|
end
|
53
53
|
|
54
54
|
# GET /studies/{id}/patient
|
55
55
|
def study_patient(id)
|
56
|
-
|
56
|
+
handle_response(base_uri["studies/#{id}/patient"].get)
|
57
57
|
end
|
58
58
|
|
59
59
|
# GET /studies/{id}/series
|
60
60
|
def study_series(id) # Retrieve all the series of this patient in a single REST call
|
61
|
-
|
61
|
+
handle_response(base_uri["studies/#{id}/series"].get)
|
62
62
|
end
|
63
63
|
|
64
64
|
# GET /studies/{id}/shared-tags
|
65
65
|
def study_shared_tags(id) # "?simplify" argument to simplify output
|
66
|
-
|
66
|
+
handle_response(base_uri["studies/#{id}/shared-tags"].get)
|
67
67
|
end
|
68
68
|
|
69
69
|
# GET /studies/{id}/statistics
|
70
70
|
def study_statistics(id)
|
71
|
-
|
71
|
+
handle_response(base_uri["studies/#{id}/statistics"].get)
|
72
72
|
end
|
73
73
|
|
74
74
|
# TODO: Polymorphic resourceType resources. Repetitive. must refactor
|
75
75
|
|
76
76
|
# GET /{resourceType}/{id}/attachments
|
77
77
|
def study_attachments(id)
|
78
|
-
|
78
|
+
handle_response(base_uri["studies/#{id}/attachments"].get)
|
79
79
|
end
|
80
80
|
|
81
81
|
# DELETE /{resourceType}/{id}/attachments/{name}
|
82
82
|
def delete_study_attachment(id, name)
|
83
|
-
|
83
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}"].delete)
|
84
84
|
end
|
85
85
|
|
86
86
|
# PUT /{resourceType}/{id}/attachments/{name}
|
87
87
|
def study_attachment(id, name, payload = {})
|
88
|
-
|
88
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}"].put(payload))
|
89
89
|
end
|
90
90
|
|
91
91
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-data
|
92
92
|
def study_attachment_compressed_data(id, name)
|
93
|
-
|
93
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/compressed-data"].get)
|
94
94
|
end
|
95
95
|
|
96
96
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-md5
|
97
97
|
def study_attachment_compressed_md5(id, name)
|
98
|
-
|
98
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/compressed-md5"].get)
|
99
99
|
end
|
100
100
|
|
101
101
|
# GET /{resourceType}/{id}/attachments/{name}/compressed-size
|
102
102
|
def study_attachment_compressed_size(id, name)
|
103
|
-
|
103
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/compressed-size"].get)
|
104
104
|
end
|
105
105
|
|
106
106
|
# GET /{resourceType}/{id}/attachments/{name}/data
|
107
107
|
def study_attachment_data(id, name)
|
108
|
-
|
108
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/data"].get)
|
109
109
|
end
|
110
110
|
|
111
111
|
# GET /{resourceType}/{id}/attachments/{name}/md5
|
112
112
|
def study_attachment_md5(id, name)
|
113
|
-
|
113
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/md5"].get)
|
114
114
|
end
|
115
115
|
|
116
116
|
# GET /{resourceType}/{id}/attachments/{name}/size
|
117
117
|
def study_attachment_size(id, name)
|
118
|
-
|
118
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/size"].get)
|
119
119
|
end
|
120
120
|
|
121
121
|
# POST /{resourceType}/{id}/attachments/{name}/verify-md5
|
122
122
|
def study_attachment_verify_md5(id, name)
|
123
|
-
|
123
|
+
handle_response(base_uri["studies/#{id}/attachments/#{name}/verify-md5"].get)
|
124
124
|
end
|
125
125
|
|
126
126
|
# GET /{resourceType}/{id}/metadata
|
127
127
|
def study_all_metadata(id)
|
128
|
-
|
128
|
+
handle_response(base_uri["studies/#{id}/metadata"].get)
|
129
129
|
end
|
130
130
|
|
131
131
|
# GET /{resourceType}/{id}/metadata/{name}
|
132
132
|
def study_metadata(id, name)
|
133
|
-
|
133
|
+
handle_response(base_uri["studies/#{id}/metadata/#{name}"].get)
|
134
134
|
end
|
135
135
|
|
136
136
|
# DELETE /{resourceType}/{id}/metadata/{name}
|
137
137
|
def study_delete_metadata(id, name)
|
138
|
-
|
138
|
+
handle_response(base_uri["studies/#{id}/metadata/#{name}"].delete)
|
139
139
|
end
|
140
140
|
|
141
141
|
# PUT /{resourceType}/{id}/metadata/{name}
|
142
142
|
def study_update_metadata(id, name, payload = {})
|
143
|
-
|
143
|
+
handle_response(base_uri["studies/#{id}/metadata/#{name}"].put(payload))
|
144
144
|
end
|
145
|
-
|
145
|
+
|
146
146
|
end
|
147
|
-
end
|
147
|
+
end
|
data/lib/orthanc/tools.rb
CHANGED
@@ -4,7 +4,7 @@ module Orthanc
|
|
4
4
|
|
5
5
|
# POST /tools/create-dicom
|
6
6
|
def tools_create_dicom(payload = {}) # Create and store a new DICOM instance (experimental)
|
7
|
-
|
7
|
+
handle_response(base_uri["tools/create-dicom"].post(payload))
|
8
8
|
end
|
9
9
|
|
10
10
|
# GET /tools/dicom-conformance
|
@@ -14,17 +14,17 @@ module Orthanc
|
|
14
14
|
|
15
15
|
# POST /tools/execute-script
|
16
16
|
def tools_execute_script(payload = {}) # Execute the Lua script in the POST body (experimental)
|
17
|
-
|
17
|
+
handle_response(base_uri["tools/execute-script"].post(payload))
|
18
18
|
end
|
19
19
|
|
20
20
|
# GET /tools/generate-uid
|
21
21
|
def tools_generate_uid(level) # "level" argument among "patient", "study", "series" and "instance"
|
22
|
-
|
22
|
+
handle_response(base_uri["tools/generate-uid"].get({params: {level: level}}))
|
23
23
|
end
|
24
24
|
|
25
25
|
# POST /tools/lookup
|
26
26
|
def tools_lookup(payload = {}) # Map DICOM UIDs to Orthanc identifiers
|
27
|
-
|
27
|
+
handle_response(base_uri["tools/lookup"].post(payload))
|
28
28
|
end
|
29
29
|
|
30
30
|
# GET /tools/now
|
@@ -34,8 +34,8 @@ module Orthanc
|
|
34
34
|
|
35
35
|
# POST /tools/reset
|
36
36
|
def tools_reset(payload = {}) # Hot restart of Orthanc, the configuration file will be read again
|
37
|
-
|
37
|
+
handle_response(base_uri["tools/reset"].post(payload))
|
38
38
|
end
|
39
39
|
|
40
40
|
end
|
41
|
-
end
|
41
|
+
end
|
data/lib/orthanc/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: orthanc
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.1.
|
4
|
+
version: 0.1.1
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Simon Rascovsky
|
8
8
|
autorequire:
|
9
9
|
bindir: exe
|
10
10
|
cert_chain: []
|
11
|
-
date: 2015-04-
|
11
|
+
date: 2015-04-17 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
|