opentox-ruby 0.0.2 → 1.0.0

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metadata CHANGED
@@ -1,13 +1,13 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: opentox-ruby
3
3
  version: !ruby/object:Gem::Version
4
- hash: 27
5
- prerelease: false
4
+ hash: 23
5
+ prerelease:
6
6
  segments:
7
+ - 1
7
8
  - 0
8
9
  - 0
9
- - 2
10
- version: 0.0.2
10
+ version: 1.0.0
11
11
  platform: ruby
12
12
  authors:
13
13
  - Christoph Helma, Martin Guetlein, Andreas Maunz, Micha Rautenberg, David Vorgrimmler
@@ -15,7 +15,7 @@ autorequire:
15
15
  bindir: bin
16
16
  cert_chain: []
17
17
 
18
- date: 2010-11-30 00:00:00 +01:00
18
+ date: 2011-03-09 00:00:00 +01:00
19
19
  default_executable:
20
20
  dependencies:
21
21
  - !ruby/object:Gem::Dependency
@@ -243,7 +243,7 @@ dependencies:
243
243
  type: :runtime
244
244
  version_requirements: *id016
245
245
  - !ruby/object:Gem::Dependency
246
- name: rjb
246
+ name: ohm
247
247
  prerelease: false
248
248
  requirement: &id017 !ruby/object:Gem::Requirement
249
249
  none: false
@@ -257,107 +257,37 @@ dependencies:
257
257
  type: :runtime
258
258
  version_requirements: *id017
259
259
  - !ruby/object:Gem::Dependency
260
- name: dm-core
260
+ name: SystemTimer
261
261
  prerelease: false
262
262
  requirement: &id018 !ruby/object:Gem::Requirement
263
263
  none: false
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  requirements:
265
265
  - - ">="
266
266
  - !ruby/object:Gem::Version
267
- hash: 1
267
+ hash: 3
268
268
  segments:
269
- - 1
270
- version: "1"
269
+ - 0
270
+ version: "0"
271
271
  type: :runtime
272
272
  version_requirements: *id018
273
273
  - !ruby/object:Gem::Dependency
274
- name: dm-serializer
274
+ name: rjb
275
275
  prerelease: false
276
276
  requirement: &id019 !ruby/object:Gem::Requirement
277
277
  none: false
278
278
  requirements:
279
279
  - - ">="
280
280
  - !ruby/object:Gem::Version
281
- hash: 1
281
+ hash: 3
282
282
  segments:
283
- - 1
284
- version: "1"
283
+ - 0
284
+ version: "0"
285
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  type: :runtime
286
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  version_requirements: *id019
287
- - !ruby/object:Gem::Dependency
288
- name: dm-timestamps
289
- prerelease: false
290
- requirement: &id020 !ruby/object:Gem::Requirement
291
- none: false
292
- requirements:
293
- - - ">="
294
- - !ruby/object:Gem::Version
295
- hash: 1
296
- segments:
297
- - 1
298
- version: "1"
299
- type: :runtime
300
- version_requirements: *id020
301
- - !ruby/object:Gem::Dependency
302
- name: dm-types
303
- prerelease: false
304
- requirement: &id021 !ruby/object:Gem::Requirement
305
- none: false
306
- requirements:
307
- - - ">="
308
- - !ruby/object:Gem::Version
309
- hash: 1
310
- segments:
311
- - 1
312
- version: "1"
313
- type: :runtime
314
- version_requirements: *id021
315
- - !ruby/object:Gem::Dependency
316
- name: dm-migrations
317
- prerelease: false
318
- requirement: &id022 !ruby/object:Gem::Requirement
319
- none: false
320
- requirements:
321
- - - ">="
322
- - !ruby/object:Gem::Version
323
- hash: 1
324
- segments:
325
- - 1
326
- version: "1"
327
- type: :runtime
328
- version_requirements: *id022
329
- - !ruby/object:Gem::Dependency
330
- name: dm-mysql-adapter
331
- prerelease: false
332
- requirement: &id023 !ruby/object:Gem::Requirement
333
- none: false
334
- requirements:
335
- - - ">="
336
- - !ruby/object:Gem::Version
337
- hash: 1
338
- segments:
339
- - 1
340
- version: "1"
341
- type: :runtime
342
- version_requirements: *id023
343
- - !ruby/object:Gem::Dependency
344
- name: dm-validations
345
- prerelease: false
346
- requirement: &id024 !ruby/object:Gem::Requirement
347
- none: false
348
- requirements:
349
- - - ">="
350
- - !ruby/object:Gem::Version
351
- hash: 1
352
- segments:
353
- - 1
354
- version: "1"
355
- type: :runtime
356
- version_requirements: *id024
357
287
  - !ruby/object:Gem::Dependency
358
288
  name: haml
359
289
  prerelease: false
360
- requirement: &id025 !ruby/object:Gem::Requirement
290
+ requirement: &id020 !ruby/object:Gem::Requirement
361
291
  none: false
362
292
  requirements:
363
293
  - - ">="
@@ -367,11 +297,11 @@ dependencies:
367
297
  - 3
368
298
  version: "3"
369
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  type: :runtime
370
- version_requirements: *id025
300
+ version_requirements: *id020
371
301
  - !ruby/object:Gem::Dependency
372
302
  name: jeweler
373
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  prerelease: false
374
- requirement: &id026 !ruby/object:Gem::Requirement
304
+ requirement: &id021 !ruby/object:Gem::Requirement
375
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  none: false
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  requirements:
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  - - ">="
@@ -381,50 +311,57 @@ dependencies:
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  - 0
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  version: "0"
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  type: :development
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- version_requirements: *id026
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+ version_requirements: *id021
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315
  description: Ruby wrapper for the OpenTox REST API (http://www.opentox.org)
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  email: helma@in-silico.ch
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317
  executables:
388
- - opentox-install-ubuntu.sh
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318
  - opentox-install-debian.sh
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+ - opentox-install-ubuntu.sh
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320
  extensions: []
391
321
 
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  extra_rdoc_files:
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323
  - LICENSE
394
- - README.rdoc
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+ - README.markdown
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  files:
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326
  - LICENSE
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- - README.rdoc
327
+ - README.markdown
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328
  - Rakefile
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329
  - VERSION
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  - bin/opentox-install-debian.sh
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331
  - bin/opentox-install-ubuntu.sh
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332
  - lib/algorithm.rb
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+ - lib/authorization.rb
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334
  - lib/compound.rb
404
335
  - lib/config/config_ru.rb
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336
  - lib/dataset.rb
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337
  - lib/environment.rb
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+ - lib/error.rb
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339
  - lib/feature.rb
408
340
  - lib/helper.rb
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341
  - lib/model.rb
342
+ - lib/ontology_service.rb
410
343
  - lib/opentox-ruby.rb
411
344
  - lib/opentox.owl
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345
  - lib/opentox.rb
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346
  - lib/overwrite.rb
414
347
  - lib/parser.rb
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+ - lib/policy.rb
415
349
  - lib/rest_client_wrapper.rb
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350
  - lib/serializer.rb
417
351
  - lib/spork.rb
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352
  - lib/task.rb
419
353
  - lib/templates/config.yaml
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+ - lib/templates/default_guest_policy.xml
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+ - lib/templates/default_policy.xml
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+ - lib/to-html.rb
420
357
  - lib/validation.rb
421
358
  has_rdoc: true
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359
  homepage: http://github.com/helma/opentox-ruby
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360
  licenses: []
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361
 
425
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  post_install_message:
426
- rdoc_options:
427
- - --charset=UTF-8
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+ rdoc_options: []
364
+
428
365
  require_paths:
429
366
  - lib
430
367
  required_ruby_version: !ruby/object:Gem::Requirement
@@ -448,7 +385,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
448
385
  requirements: []
449
386
 
450
387
  rubyforge_project:
451
- rubygems_version: 1.3.7
388
+ rubygems_version: 1.4.2
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389
  signing_key:
453
390
  specification_version: 3
454
391
  summary: Ruby wrapper for the OpenTox REST API
data/README.rdoc DELETED
@@ -1,23 +0,0 @@
1
- = opentox-ruby
2
-
3
- Ruby wrapper for the OpenTox REST API (http://www.opentox.org)
4
-
5
- == Installation
6
-
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- Run the following if you haven't already:
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-
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- gem sources -a http://gems.github.com
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-
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- Install the gem:
12
-
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- sudo gem install helma-opentox-ruby
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-
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- == Usage
16
-
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- - adjust the settings in $HOME/.opentox/config
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- - require 'opentox-ruby' in your ruby application
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- - consult the rdoc API documentation for details
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-
21
- == Copyright
22
-
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- Copyright (c) 2009-2010 Christoph Helma. See LICENSE for details.