opentox-ruby-api-wrapper 1.1.1 → 1.1.3

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Files changed (5) hide show
  1. data/Rakefile +1 -1
  2. data/VERSION +1 -1
  3. data/bin/{install.sh → opentox-install-debian.sh} +0 -0
  4. data/lib/tasks/opentox.rb +4 -12
  5. metadata +12 -12
data/Rakefile CHANGED
@@ -15,13 +15,13 @@ begin
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  gem.add_dependency "rack"
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  gem.add_dependency "rack-contrib"
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  gem.add_dependency "thin"
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- gem.add_dependency "cucumber"
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  gem.add_dependency "ezmobius-redis-rb"
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  gem.add_dependency "emk-sinatra-url-for"
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  gem.add_dependency "cehoffman-sinatra-respond_to"
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  gem.add_dependency "dm-core"
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  gem.add_dependency "datamapper"
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  gem.add_dependency "do_sqlite3"
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+ gem.add_development_dependency "cucumber"
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  gem.files = FileList["[A-Z]*", "{bin,generators,lib,test}/**/*", 'lib/jeweler/templates/.gitignore']
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  gem.files.include %w(lib/tasks/opentox.rb, lib/tasks/redis.rb, lib/environment.rb, lib/algorithm.rb, lib/compound.rb, lib/dataset.rb, lib/feature.rb, lib/model.rb, lib/utils.rb, lib/templates/*)
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  # gem is a Gem::Specification... see http://www.rubygems.org/read/chapter/20 for additional settings
data/VERSION CHANGED
@@ -1 +1 @@
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- 1.1.1
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+ 1.1.3
data/bin/{install.sh → opentox-install-debian.sh} RENAMED
File without changes
data/lib/tasks/opentox.rb CHANGED
@@ -22,16 +22,6 @@ end
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  namespace :opentox do
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- desc "Install required gems"
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- task :install do
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- puts `sudo gem install #{@gems}`
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- end
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-
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- desc "Update gems"
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- task :update do
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- puts `sudo gem update #{@gems}`
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- end
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-
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  namespace :services do
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  desc "Run opentox services"
@@ -51,7 +41,8 @@ namespace :opentox do
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  puts "Cannot start #{service} on port #{port}."
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  end
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  when 'passenger'
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- `touch #{File.join(dir, 'tmp/restart.txt')}`
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+ FileUtils.mkdir_p File.join(dir, 'tmp')
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+ FileUtils.touch File.join(dir, 'tmp/restart.txt')
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  puts "#{service} restarted."
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  else
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  puts "not yet implemented"
@@ -108,7 +99,8 @@ task :start do
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  puts "Cannot start #{service} on port #{port}."
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  end
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  when 'passenger'
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- `touch tmp/restart.txt`
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+ FileUtils.mkdir_p File.join(dir, 'tmp')
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+ FileUtils.touch File.join(dir, 'tmp/restart.txt')
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  puts "#{service} restarted."
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  else
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  puts "not yet implemented"
metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: opentox-ruby-api-wrapper
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  version: !ruby/object:Gem::Version
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- version: 1.1.1
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+ version: 1.1.3
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  platform: ruby
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  authors:
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  - Christoph Helma
@@ -10,7 +10,7 @@ bindir: bin
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  cert_chain: []
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  date: 2009-11-17 00:00:00 +01:00
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- default_executable: install.sh
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+ default_executable: opentox-install-debian.sh
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: rest-client
@@ -63,7 +63,7 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: cucumber
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+ name: ezmobius-redis-rb
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  type: :runtime
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
@@ -73,7 +73,7 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: ezmobius-redis-rb
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+ name: emk-sinatra-url-for
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  type: :runtime
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
@@ -83,7 +83,7 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: emk-sinatra-url-for
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+ name: cehoffman-sinatra-respond_to
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  type: :runtime
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
@@ -93,7 +93,7 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: cehoffman-sinatra-respond_to
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+ name: dm-core
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  type: :runtime
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
@@ -103,7 +103,7 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: dm-core
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+ name: datamapper
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  type: :runtime
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
@@ -113,7 +113,7 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: datamapper
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+ name: do_sqlite3
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  type: :runtime
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
@@ -123,8 +123,8 @@ dependencies:
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  version: "0"
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  version:
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  - !ruby/object:Gem::Dependency
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- name: do_sqlite3
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- type: :runtime
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+ name: cucumber
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+ type: :development
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  version_requirement:
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  version_requirements: !ruby/object:Gem::Requirement
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  requirements:
@@ -135,7 +135,7 @@ dependencies:
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  description: Ruby wrapper for the OpenTox REST API (http://www.opentox.org)
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  email: helma@in-silico.ch
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  executables:
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- - install.sh
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+ - opentox-install-debian.sh
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  extensions: []
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  extra_rdoc_files:
@@ -146,7 +146,7 @@ files:
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  - README.rdoc
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  - Rakefile
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  - VERSION
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- - bin/install.sh
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+ - bin/opentox-install-debian.sh
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  - lib/algorithm.rb
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  - lib/compound.rb
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  - lib/dataset.rb