opener-kaf-naf-parser 1.0.1 → 1.0.2

checksums.yaml

@@ -1,7 +1,7 @@
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data/README.md

@@ -1,5 +1,9 @@
+replace:
 kaf-naf-parser
-==============
+kaf-naf-parser
+
+Introduction
+------------
 
 This library converts KAF to NAF and NAF to KAF. It also contains a webservice
 for doing exactly this.
@@ -8,8 +12,23 @@ It uses slightly altered
 distributions of the VUA_pylib and KafNafParserPy but it keeps the external 
 libraries contained, so that shouldn't influence anything on your system.
 
-This does mean however, that changes to the VUA_pylib and KafNafParserPy are not
-automatically resembled in the kaf-naf-parser.
+### Confused by some terminology?
+
+This software is part of a larger collection of natural language processing
+tools known as "the OpeNER project". You can find more information about the
+project at (the OpeNER portal)[http://opener-project.github.io]. There you can
+also find references to terms like KAF (an XML standard to represent linguistic
+annotations in texts), component, cores, scenario's and pipelines.
+
+Quick Use Example
+-----------------
+
+Installing the kaf-naf-parser can be done by executing:
+
+    gem install opener-kaf-naf-parser
+
+Please bare in mind that all components in OpeNER take KAF as an input and
+output KAF by default.
 
 It ships with 3 command line tools and a webservice:
 
@@ -38,9 +57,49 @@ And can then be accessed at: http://localhost:9292
 
 Easiest way to install the gem:
 
-```
-git clone git@github.com:opener-project/kaf-naf-parser.git
-cd kaf-naf-parser
-rake install
-```
+### Daemon
+
+Last but not least the kaf-naf-parser comes shipped with a daemon that
+can read jobs (and write) jobs to and from Amazon SQS queues. For more
+information type:
+
+    kaf-naf-parser-daemon -h
+
+
+Description of dependencies
+---------------------------
+
+This component runs best if you run it in an environment suited for OpeNER
+components. You can find an installation guide and helper tools in the (OpeNER
+installer)[https://github.com/opener-project/opener-installer] and (an
+installation guide on the Opener
+Website)[http://opener-project.github.io/getting-started/how-to/local-installation.html]
+
+At least you need the following system setup:
+
+### Dependencies for normal use:
+
+* Ruby 1.9.3 or newer
+* Python 2.6
+
+Where to go from here
+---------------------
+
+* Check (the project website)[http://opener-project.github.io]
+* (Checkout the webservice)[http://opener.olery.com/kaf-naf-parser]
+
+Report problem/Get help
+-----------------------
+
+If you encounter problems, please email support@opener-project.eu or leave an
+issue in the (issue tracker)[https://github.com/opener-project/kaf-naf-parser/issues].
+
+
+Contributing
+------------
 
+1. Fork it ( http://github.com/opener-project/kaf-naf-parser/fork )
+2. Create your feature branch (`git checkout -b my-new-feature`)
+3. Commit your changes (`git commit -am 'Add some feature'`)
+4. Push to the branch (`git push origin my-new-feature`)
+5. Create new Pull Request

data/bin/kaf-naf-parser-daemon

@@ -0,0 +1,10 @@
+#!/usr/bin/env ruby
+
+require 'opener/daemons'
+
+exec_path = File.expand_path('../../exec/kaf-naf-parser.rb', __FILE__)
+
+Opener::Daemons::Controller.new(
+  :name      => 'kaf-naf-parser',
+  :exec_path => exec_path
+)

data/core/kaf-naf-parser.py

@@ -1,12 +1,12 @@
 #!/usr/bin/env python
 
-# This updates the load path to ensure that the local site-packages directory
-# can be used to load packages (e.g. a locally installed copy of lxml).
-
 import sys, getopt, os
 
-sys.path.append(os.path.join(os.path.dirname(os.path.abspath(__file__)), 'site-packages/pre_build'))
-sys.path.append(os.path.join(os.path.dirname(os.path.abspath(__file__)), 'site-packages/pre_install'))
+this_folder = os.path.dirname(os.path.realpath(__file__))
+
+# This updates the load path to ensure that the local site-packages directory
+# can be used to load packages (e.g. a locally installed copy of lxml).
+sys.path.append(os.path.join(this_folder, 'site-packages/pre_install'))
 
 from KafNafParser import KafNafParser
 

data/exec/kaf-naf-parser.rb

@@ -0,0 +1,9 @@
+#!/usr/bin/env ruby
+
+require 'opener/daemons'
+require_relative '../lib/opener/kaf_naf_parser'
+
+options = Opener::Daemons::OptParser.parse!(ARGV)
+daemon  = Opener::Daemons::Daemon.new(Opener::KafNafParser, options)
+
+daemon.start

data/ext/hack/Rakefile

@@ -0,0 +1,13 @@
+require 'rake'
+require_relative 'support'
+
+desc 'Verifies the requirements'
+task :requirements do
+  verify_requirements
+end
+
+task :default => :requirements do
+  path = File.join(PYTHON_SITE_PACKAGES, 'pre_install')
+
+  pip_install(PRE_INSTALL_REQUIREMENTS, path)
+end

data/lib/opener/kaf_naf_parser/version.rb

@@ -1,5 +1,5 @@
 module Opener
   class KafNafParser
-    VERSION = '1.0.1'
+    VERSION = '1.0.2'
   end # KafNafVersion
 end # Opener

data/opener-kaf-naf-parser.gemspec

@@ -8,6 +8,7 @@ Gem::Specification.new do |gem|
   gem.description           = gem.summary
   gem.homepage              = "http://github.com/cltl/KafNafParserPy"
   gem.required_ruby_version = '>= 1.9.2'
+  gem.extensions  = ['ext/hack/Rakefile']
 
   gem.files = Dir.glob([
     'core/packages/**/*',
@@ -19,7 +20,8 @@ Gem::Specification.new do |gem|
     '*.gemspec',
     'LICENSE',
     '*_requirements.txt',
-    'README.md'
+    'README.md',
+    'exec/**/*'
   ]).select { |file| File.file?(file) }
 
   gem.executables = Dir.glob('bin/*').map { |file| File.basename(file) }
@@ -31,6 +33,8 @@ Gem::Specification.new do |gem|
   gem.add_dependency 'uuidtools'
   gem.add_dependency 'opener-webservice'
   gem.add_dependency 'puma'
+  gem.add_dependency 'opener-daemons'
+  gem.add_dependency 'opener-core', ['>= 0.1.2']
 
   gem.add_development_dependency 'rspec'
   gem.add_development_dependency 'cucumber'

data/pre_install_requirements.txt

@@ -0,0 +1,3 @@
+https://github.com/opener-project/VU-kaf-parser/archive/master.zip#egg=VUKafParserPy
+https://github.com/opener-project/VUA_pylib/archive/v1.6.zip#egg=VUA_pylib
+https://github.com/opener-project/KafNafParserPy/archive/v1.5.zip#egg=KafNafParserPy

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: opener-kaf-naf-parser
 version: !ruby/object:Gem::Version
-  version: 1.0.1
+  version: 1.0.2
 platform: ruby
 authors:
 - ruben.izquierdobevia@vu.nl
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2014-05-20 00:00:00.000000000 Z
+date: 2014-05-23 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: builder
@@ -109,6 +109,34 @@ dependencies:
     - - ">="
       - !ruby/object:Gem::Version
         version: '0'
+- !ruby/object:Gem::Dependency
+  name: opener-daemons
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: opener-core
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: 0.1.2
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: 0.1.2
 - !ruby/object:Gem::Dependency
   name: rspec
   requirement: !ruby/object:Gem::Requirement
@@ -168,68 +196,26 @@ dependencies:
 description: Parser to translate KAF to NAF and back.
 email: 
 executables:
+- kaf-naf-parser-daemon
 - naf-to-kaf
 - kaf-naf-parser
 - kaf-to-naf
 - kaf-naf-parser-server
-extensions: []
+extensions:
+- ext/hack/Rakefile
 extra_rdoc_files: []
 files:
 - LICENSE
 - README.md
 - bin/kaf-naf-parser
+- bin/kaf-naf-parser-daemon
 - bin/kaf-naf-parser-server
 - bin/kaf-to-naf
 - bin/naf-to-kaf
 - config.ru
 - core/kaf-naf-parser.py
-- core/packages/KafNafParser-1.2.tar.gz
-- core/packages/VUA_pylib-1.3.tar.gz
-- core/site-packages/pre_build/KafNafParser-1.2-py2.7.egg-info/PKG-INFO
-- core/site-packages/pre_build/KafNafParser-1.2-py2.7.egg-info/SOURCES.txt
-- core/site-packages/pre_build/KafNafParser-1.2-py2.7.egg-info/dependency_links.txt
-- core/site-packages/pre_build/KafNafParser-1.2-py2.7.egg-info/installed-files.txt
-- core/site-packages/pre_build/KafNafParser-1.2-py2.7.egg-info/top_level.txt
-- core/site-packages/pre_build/KafNafParser/KafNafParserMod.py
-- core/site-packages/pre_build/KafNafParser/__init__.py
-- core/site-packages/pre_build/KafNafParser/constituency_data.py
-- core/site-packages/pre_build/KafNafParser/coreference_data.py
-- core/site-packages/pre_build/KafNafParser/dependency_data.py
-- core/site-packages/pre_build/KafNafParser/entity_data.py
-- core/site-packages/pre_build/KafNafParser/external_references_data.py
-- core/site-packages/pre_build/KafNafParser/feature_extractor/__init__.py
-- core/site-packages/pre_build/KafNafParser/feature_extractor/constituency.py
-- core/site-packages/pre_build/KafNafParser/feature_extractor/dependency.py
-- core/site-packages/pre_build/KafNafParser/features_data.py
-- core/site-packages/pre_build/KafNafParser/header_data.py
-- core/site-packages/pre_build/KafNafParser/opinion_data.py
-- core/site-packages/pre_build/KafNafParser/references_data.py
-- core/site-packages/pre_build/KafNafParser/span_data.py
-- core/site-packages/pre_build/KafNafParser/term_data.py
-- core/site-packages/pre_build/KafNafParser/term_sentiment_data.py
-- core/site-packages/pre_build/KafNafParser/text_data.py
-- core/site-packages/pre_build/VUA_pylib-1.3-py2.7.egg-info/PKG-INFO
-- core/site-packages/pre_build/VUA_pylib-1.3-py2.7.egg-info/SOURCES.txt
-- core/site-packages/pre_build/VUA_pylib-1.3-py2.7.egg-info/dependency_links.txt
-- core/site-packages/pre_build/VUA_pylib-1.3-py2.7.egg-info/installed-files.txt
-- core/site-packages/pre_build/VUA_pylib-1.3-py2.7.egg-info/top_level.txt
-- core/site-packages/pre_build/VUA_pylib/__init__.py
-- core/site-packages/pre_build/VUA_pylib/common/__init__.py
-- core/site-packages/pre_build/VUA_pylib/common/common.py
-- core/site-packages/pre_build/VUA_pylib/corpus_reader/__init__.py
-- core/site-packages/pre_build/VUA_pylib/corpus_reader/google_web_nl.py
-- core/site-packages/pre_build/VUA_pylib/io_utils/__init__.py
-- core/site-packages/pre_build/VUA_pylib/io_utils/feature_file.py
-- core/site-packages/pre_build/VUA_pylib/lexicon/__init__.py
-- core/site-packages/pre_build/VUA_pylib/lexicon/lexicon.py
-- core/site-packages/pre_build/VUKafParserPy-1.0-py2.7.egg-info/PKG-INFO
-- core/site-packages/pre_build/VUKafParserPy-1.0-py2.7.egg-info/SOURCES.txt
-- core/site-packages/pre_build/VUKafParserPy-1.0-py2.7.egg-info/dependency_links.txt
-- core/site-packages/pre_build/VUKafParserPy-1.0-py2.7.egg-info/installed-files.txt
-- core/site-packages/pre_build/VUKafParserPy-1.0-py2.7.egg-info/top_level.txt
-- core/site-packages/pre_build/VUKafParserPy/KafDataObjectsMod.py
-- core/site-packages/pre_build/VUKafParserPy/KafParserMod.py
-- core/site-packages/pre_build/VUKafParserPy/__init__.py
+- exec/kaf-naf-parser.rb
+- ext/hack/Rakefile
 - ext/hack/support.rb
 - lib/opener/kaf_naf_parser.rb
 - lib/opener/kaf_naf_parser/cli.rb
@@ -239,7 +225,7 @@ files:
 - lib/opener/kaf_naf_parser/views/index.erb
 - lib/opener/kaf_naf_parser/views/result.erb
 - opener-kaf-naf-parser.gemspec
-- pre_build_requirements.txt
+- pre_install_requirements.txt
 homepage: http://github.com/cltl/KafNafParserPy
 licenses: []
 metadata: {}

data/core/site-packages/pre_build/KafNafParser/KafNafParserMod.py

@@ -1,338 +0,0 @@
-## LIST OF CHANGES
-# Ruben 8-nov-2013
-#    + included layers for entities, properties, opinions
-#    + renamed all classes to Cnameoftheclass
-# Ruben 15-nov-2013
-#	+ included constituency layer
-#
-# Ruben 19-nov-2013
-#	+ included dependency layer
-# Ruben 17-dec-2013
-#	+ modified all to red/write NAF and KAF
-#
-# Ruben 21-Feb-2014
-#	+ Included coreference layer
-
-
-__last_modified  = '17dec2013'
-
-from lxml import etree
-from header_data import *
-from text_data import *
-from term_data import *
-from entity_data import *
-from features_data import *
-from opinion_data import *
-from constituency_data import *
-from dependency_data import *
-from feature_extractor import Cdependency_extractor, Cconstituency_extractor
-from coreference_data import *
-from references_data import Creferences
-
-import sys
-
-
-
-class KafNafParser:
-	def __init__(self,filename):
-		self.tree = None
-		self.filename = filename
-		self.tree = etree.parse(filename,etree.XMLParser(remove_blank_text=True))
-		self.root = self.tree.getroot()
-		self.type = self.root.tag # KAF NAF
-
-		self.header = None
-		self.text_layer = None
-		self.term_layer = None
-		self.entity_layer = None
-		self.features_layer = None
-		self.opinion_layer = None
-		self.constituency_layer = None
-		self.dependency_layer = None
-		self.coreference_layer = None
-
-		## Specific feature extractor for complicated layers
-		self.my_dependency_extractor = None
-		self.my_constituency_extractor = None
-		##################################################
-
-		#######
-		self.dict_tokens_for_tid = None
-		##
-
-		self.lang = self.root.get('{http://www.w3.org/XML/1998/namespace}lang')
-		self.version = self.root.get('version')
-
-		if self.type == 'NAF':
-			node_header = self.root.find('nafHeader')
-		elif self.type == 'KAF':
-			node_header = self.root.find('kafHeader')
-
-		if node_header is not None:
-			self.header = CHeader(node_header,self.type)
-
-		# Text layer adapted to naf/kaf
-		node_text = self.root.find('text')
-		if node_text is not None:
-			self.text_layer = Ctext(node=node_text,type=self.type)
-
-		node_term = self.root.find('terms')
-		if node_term is not None:
-			self.term_layer = Cterms(node=node_term,type=self.type)
-
-		node_entity = self.root.find('entities')
-		if node_entity is not None:
-			self.entity_layer = Centities(node_entity,type=self.type)
-
-		node_features = self.root.find('features')
-		if node_features is not None:
-			self.features_layer = Cfeatures(node_features,type=self.type)
-
-		node_opinions = self.root.find('opinions')
-		if node_opinions is not None:
-			self.opinion_layer = Copinions(node_opinions,type=self.type)
-
-		# Definition KAF/NAF is the same
-		node_constituency = self.root.find('constituency')
-		if node_constituency is not None:
-			self.constituency_layer = Cconstituency(node_constituency)
-
-		# Definition KAF/NAF is the same
-		node_dependency = self.root.find('deps')
-		if node_dependency is not None:
-			self.dependency_layer = Cdependencies(node_dependency)
-
-		node_coreferences = self.root.find('coreferences')
-		if node_coreferences is not None:
-			self.coreference_layer = Ccoreferences(node_coreferences,type=self.type)
-
-	def get_type(self):
-		return self.type
-
-	def get_filename(self):
-		return self.filename
-
-	def to_kaf(self):
-		#Convert the root
-		if self.type == 'NAF':
-			self.root.tag = 'KAF'
-			self.type = 'KAF'
-
-		## Convert the header
-		if self.header is not None:
-			self.header.to_kaf()
-
-		## Convert the token layer
-		if self.text_layer is not None:
-			self.text_layer.to_kaf()
-
-		## Convert the term layer
-		if self.term_layer is not None:
-			self.term_layer.to_kaf()
-
-		## Convert the entity layer
-		if self.entity_layer is not None:
-			self.entity_layer.to_kaf()
-
-		## Convert the features layer
-		## There is no feature layer defined in NAF, but we assumed
-		## that is defined will be followin the same rules
-		if self.features_layer is not None:
-			self.features_layer.to_kaf()
-
-
-		##Convert the opinion layer
-		if self.opinion_layer is not None:
-			self.opinion_layer.to_kaf()
-
-		## Convert the constituency layer
-		## This layer is exactly the same in KAF/NAF
-		if self.constituency_layer is not None:
-			self.constituency_layer.to_kaf()	#Does nothing...
-
-
-		## Convert the dedepency layer
-		## It is not defined on KAF so we assme both will be similar
-		if self.dependency_layer is not None:
-			self.dependency_layer.to_kaf()
-
-		if self.coreference_layer is not None:
-			self.coreference_layer.to_kaf()
-
-
-	def to_naf(self):
-		#Convert the root
-		if self.type == 'KAF':
-			self.root.tag = self.type = 'NAF'
-
-		## Convert the header
-		if self.header is not None:
-			self.header.to_naf()
-
-		## Convert the token layer
-		if self.text_layer is not None:
-			self.text_layer.to_naf()
-
-
-		## Convert the term layer
-		if self.term_layer is not None:
-			self.term_layer.to_naf()
-
-
-		## Convert the entity layer
-		if self.entity_layer is not None:
-			self.entity_layer.to_naf()
-
-		## Convert the features layer
-		## There is no feature layer defined in NAF, but we assumed
-		## that is defined will be followin the same rules
-		if self.features_layer is not None:
-			self.features_layer.to_naf()
-
-
-		##Convert the opinion layer
-		if self.opinion_layer is not None:
-			self.opinion_layer.to_naf()
-
-
-		## Convert the constituency layer
-		## This layer is exactly the same in KAF/NAF
-		if self.constituency_layer is not None:
-			self.constituency_layer.to_naf()	#Does nothing...
-
-
-		## Convert the dedepency layer
-		## It is not defined on KAF so we assume both will be similar
-		if self.dependency_layer is not None:
-			self.dependency_layer.to_naf()	  #Does nothing...
-
-		if self.coreference_layer is not None:
-			self.coreference_layer.to_naf()
-
-
-
-	def print_constituency(self):
-		print self.constituency_layer
-
-	def get_trees(self):
-		if self.constituency_layer is not None:
-			for tree in self.constituency_layer.get_trees():
-				yield tree
-
-
-	def get_dependencies(self):
-		if self.dependency_layer is not None:
-			for dep in self.dependency_layer.get_dependencies():
-				yield dep
-
-	def get_language(self):
-		return self.lang
-
-	def get_tokens(self):
-		for token in self.text_layer:
-			yield token
-
-	def get_terms(self):
-		for term in self.term_layer:
-			yield term
-
-	def get_token(self,token_id):
-		if self.text_layer is not None:
-			return self.text_layer.get_wf(token_id)
-		else:
-			return None
-
-	def get_term(self,term_id):
-		if self.term_layer is not None:
-			return self.term_layer.get_term(term_id)
-		else:
-			return None
-
-	def get_properties(self):
-		if self.features_layer is not None:
-			for property in self.features_layer.get_properties():
-				yield property
-
-	def get_entities(self):
-		if self.entity_layer is not None:
-			for entity in self.entity_layer:
-				yield entity
-
-	def get_opinions(self):
-		if self.opinion_layer is not None:
-			for opinion in self.opinion_layer.get_opinions():
-				yield opinion
-
-
-	def dump(self,filename=sys.stdout):
-		self.tree.write(filename,encoding='UTF-8',pretty_print=True,xml_declaration=True)
-
-
-	def remove_opinion_layer(self):
-		if self.opinion_layer is not None:
-			this_node = self.opinion_layer.get_node()
-			self.root.remove(this_node)
-			self.opinion_layer = None
-
-	def remove_term_layer(self):
-		if self.term_layer is not None:
-			this_node = self.term_layer.get_node()
-			self.root.remove(this_node)
-			self.term_layer = None
-
-			if self.header is not None:
-				self.header.remove_lp('terms')
-
-	def get_constituency_extractor(self):
-		if self.constituency_layer is not None:	##Otherwise there are no constituens
-			if self.my_constituency_extractor is None:
-				self.my_constituency_extractor = Cconstituency_extractor(self)
-			return self.my_constituency_extractor
-		else:
-			return None
-
-	def get_dependency_extractor(self):
-		if self.dependency_layer is not None:	#otherwise there are no dependencies
-			if self.my_dependency_extractor is None:
-				self.my_dependency_extractor = Cdependency_extractor(self)
-			return self.my_dependency_extractor
-		else:
-			return None
-
-	## ADDING METHODS
-	def add_wf(self,wf_obj):
-		if self.text_layer is None:
-			self.text_layer = Ctext(type=self.type)
-			self.root.append(self.text_layer.get_node())
-		self.text_layer.add_wf(wf_obj)
-
-	def add_opinion(self,opinion_obj):
-		if self.opinion_layer is None:
-			self.opinion_layer = Copinions()
-			self.root.append(self.opinion_layer.get_node())
-		self.opinion_layer.add_opinion(opinion_obj)
-
-	def add_linguistic_processor(self, layer ,my_lp):
-		self.header.add_linguistic_processor(layer,my_lp)
-
-
-	def add_dependency(self,my_dep):
-		if self.dependency_layer is None:
-			self.dependency_layer = Cdependencies()
-			self.root.append(self.dependency_layer.get_node())
-		self.dependency_layer.add_dependency(my_dep)
-
-
-	## EXTRA FUNCTIONS
-	## Gets the token identifiers in the span of a term id
-	def get_dict_tokens_for_termid(self, term_id):
-		if self.dict_tokens_for_tid is None:
-			self.dict_tokens_for_tid = {}
-			for term in self.get_terms():
-				self.dict_tokens_for_tid[term.get_id()] = term.get_span().get_span_ids()
-
-		return self.dict_tokens_for_tid.get(term_id,[])
-
-
-
-

data/core/site-packages/pre_build/KafNafParser/__init__.py

@@ -1,14 +0,0 @@
-from KafNafParserMod import *
-from header_data import *
-from external_references_data import *
-from span_data import *
-from term_data import *
-from term_sentiment_data import *
-from text_data import *
-from entity_data import *
-from features_data import  *
-from opinion_data import *
-from dependency_data import *
-from constituency_data import *
-from references_data import *
-from coreference_data import *