openehr 1.2.8 → 1.2.9

data/.document

@@ -1,5 +0,0 @@
-lib/**/*.rb
-bin/*
-- 
-features/**/*.feature
-LICENSE.txt

data/.gitignore

@@ -1,32 +0,0 @@
-*~
-*#
-
-\#*
-.\#*
-
-# rcov generated
-coverage
-
-# rdoc generated
-rdoc
-
-# yard generated
-doc/
-.yardoc
-
-# bundler
-.bundle
-*.lock
-
-# jeweler generated
-pkg
-
-# logger generated
-log
-
-# subversion ignore
-.svn
-
-tmp
-*.gem
-*.rbc

data/.rspec

@@ -1,2 +0,0 @@
---colour
---drb

data/.travis.yml

@@ -1,4 +0,0 @@
-language: ruby
-rvm:
-  - 2.0.0
-  - 1.9.3

data/Gemfile

@@ -1,3 +0,0 @@
-source "http://rubygems.org"
-
-gemspec

data/Guardfile

@@ -1,22 +0,0 @@
-guard 'spork' do
-  watch('Gemfile')
-  watch('Gemfile.lock')
-  watch('spec/spec_helper.rb')
-  watch('feature/support/env.rb')
-end
-
-guard 'rspec', :cli => '--drb --color' do
-  watch(%r{^spec/.+_spec\.rb})
-  watch(%r{^lib/(.+)\.rb})     { |m| "spec/lib/#{m[1]}_spec.rb" }
-  watch('spec/spec_helper.rb') { "spec" }
-  watch(%r{^lib/open_ehr/parser/.+\.tt}) { "spec/lib/open_ehr/parser" }
-end
-
-guard 'cucumber', cli: '--drb --format progress' do
-  watch(%r{^features/.+\.feature$})
-  watch(%r{^features/support/.+$})          { 'features' }
-  watch(%r{^features/step_definitions/(.+)_steps\.rb$}) { |m| Dir[File.join("**/#{m[1]}.feature")][0] || 'features' }
-end
-
-notification :libnotify, :timeout => 5, :transient => true, :append => false
-

data/History.txt

@@ -1,62 +0,0 @@
-=== 1.2.2
-Removed autoload and replaced them to require
-
-=== 1.2.1
-Fixed bug and merged pull request from caron10
-
-=== 1.2.0
-Separeted terminology packages
-Catch up to Ruby 2.0.0
-
-=== 1.1.5 & 1.1.6
-Fixed some miss spells
-Implemented OpenEHR::RM::Factory class
-
-=== 1.1.4
-Parser bug fixed around  DvDuration pattern/interval.
-
-=== 1.1.3
-am/openehr_profile/quantity hierachy
-
-=== 1.1.2
-parser assigns nil for empty use in DESCRIPTION section
-
-=== 1.1.1
-parser bug fixed around openehr/am/openehr_profile/data_types/quantity
-
-=== 1.1.0
-open_ehr package will change to openehr.
-
-=== 1.0.2 2012-02-27
-Some bugs indicated form Travis-CI
-
-=== 1.0.1 2012-01-15
-C_ANY related fix
-
-=== 1.0.0 2011-12-24
-First stable release 
-
-=== 0.9.5 2011-12-02
-Bug fix around ADL parser, data types, constranit
-
-=== 0.9.4 2011-11-22
-Bug fix around ADL parser, ArchetypeOntology
-
-=== 0.9.3 2011-11-19
-Bug fix around ADL parser
-
-=== 0.9.1 2011-10-04
-Archetype instance generated from ADL file.
-
-=== 0.9.0 2011-09
-* Fixed ADL parser and AOM generation
-
-=== 0.7.0 2011-05
-* Fixed ADL parser library
-
-=== 0.6.2 2011-05-09
-* Fixed some package hierachy
-
-=== 0.6.1 2011-05-09
-
-* First gem package release

data/PostInstall.txt

@@ -1,9 +0,0 @@
-For more information on the Ruby implementation of the 
-openEHR Project,
-see http://openehr.jp/
-
-For more information on the openEHR Project,
-see http://openehr.org/
-
-
-

data/Rakefile

@@ -1,13 +0,0 @@
-require 'rubygems'
-require 'bundler'
-require "bundler/gem_tasks"
-
-require 'rake'
-require 'rspec/core'
-require 'rspec/core/rake_task'
-
-RSpec::Core::RakeTask.new(:spec) do |spec|
-  spec.pattern = FileList['spec/**/*_spec.rb']
-end
-
-task :default => :spec

data/features/rmfactory.feature

@@ -1,9 +0,0 @@
-Feature: RMFactory generates RM insntances
-  In order to generate RM instance by archetype definition
-  As RM factory
-  RM Type and attributes should be specified
-
-  Scenario: RMFactory generates DvText instance
-    Given "DV_TEXT" in archetype definition with attribute
-    When RM Factory generates instance
-    Then DvText instance should be available

data/features/step_definitions/rmfactory_steps.rb

@@ -1,11 +0,0 @@
-Given /^\"DV_TEXT\" in archetype definition with attribute$/ do
-  @type= "DV_TEXT"
-end
-
-When /^RM Factory generates instance$/ do
-  @dv_text = OpenEHR::RM::Factory.create(@type, value: 'text')
-end
-
-Then /^DvText instance should be available$/ do
-  @dv_text.should be_an_instance_of OpenEHR::RM::DataTypes::Text::DvText
-end

data/features/support/env.rb

@@ -1,10 +0,0 @@
-require 'spork'
-
-Spork.prefork do
-  $LOAD_PATH << File.expand_path('../../../lib', __FILE__)
-  require 'openehr'
-end
-
-Spork.each_run do
-
-end

data/lib/openehr/am/openehr_profile.rb

@@ -1,9 +0,0 @@
-$:.unshift(File.dirname(__FILE__))
-
-module OpenEHR
-  module AM
-    module OpenEHRProfile
-      require 'openehr_profile/data_types'
-    end
-  end
-end

data/lib/openehr/am/openehr_profile/data_types.rb

@@ -1,13 +0,0 @@
-$:.unshift(File.dirname(__FILE__)) 
-
-module OpenEHR
-  module AM
-    module OpenEHRProfile
-      module DataTypes
-        require 'data_types/text'
-        require 'data_types/quantity'
-        require 'data_types/basic'
-      end
-    end
-  end
-end

data/lib/openehr/rm/common.rb

@@ -1,19 +0,0 @@
-$:.unshift(File.dirname(__FILE__)) unless
-  $:.include?(File.dirname(__FILE__)) || $:.include?(File.expand_path(File.dirname(__FILE__)))
-require 'common/archetyped'
-require 'common/generic'
-require 'common/change_control'
-require 'common/directory'
-require 'common/resource'
-
-module OpenEHR
-  module RM
-    module Common
-      include Archetyped
-      include Generic
-      include ChangeControl
-      include Directory
-      include Resource
-    end
-  end
-end

data/lib/openehr/rm/data_types.rb

@@ -1,22 +0,0 @@
-$:.unshift(File.dirname(__FILE__))
-require 'data_types/basic'
-require 'data_types/encapsulated'
-require 'data_types/quantity'
-require 'data_types/quantity/date_time'
-require 'data_types/text'
-require 'data_types/time_specification'
-require 'data_types/uri'
-
-module OpenEHR
-  module RM
-    module DataTypes
-      include Basic
-      include Encapsulated
-      include Quantity
-      include Quantity::DateTime
-      include Text
-      include TimeSpecification
-      include URI
-    end
-  end
-end

data/lib/openehr/rm/support.rb

@@ -1,16 +0,0 @@
-$:.unshift(File.dirname(__FILE__)) unless
-  $:.include?(File.dirname(__FILE__)) || $:.include?(File.expand_path(File.dirname(__FILE__)))
-require 'support/definition'
-require 'support/identification'
-require 'support/measurement'
-#      require 'support/assumed_types'
-
-module OpenEHR
-  module RM
-    module Support
-      include Definition
-      include Identification
-      include Measurement
-    end
-  end
-end

data/openehr.gemspec

@@ -1,48 +0,0 @@
-lib = File.expand_path('../lib', __FILE__)
-$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
-require "openehr/version"
-
-Gem::Specification.new do |gem|
-  gem.name = "openehr"
-  gem.version = OpenEHR::VERSION
-  gem.platform = Gem::Platform::RUBY
-  gem.authors = ["Shinji KOBAYASHI", "Akimichi Tatsukawa", "Michael Deryugin", "Dmitry Lavrov", "Evgeny Strokov"]
-  gem.email = "skoba@moss.gr.jp"
-
-  gem.summary = "Ruby implementation of the openEHR specification"
-  gem.description = "This project is an implementation of the openEHR specification on Ruby."
-  gem.homepage = "http://openehr.jp"
-  gem.license = "Apache 2.0"
-  gem.extra_rdoc_files = [
-    "README.rdoc"
-  ]
-  gem.files         = `git ls-files`.split("\n")
-  gem.test_files    = `git ls-files -- {test,spec,features}/*`.split("\n")
-  gem.require_paths = ["lib"]
-
-  gem.add_dependency('rake')
-  gem.add_dependency('xml-simple')
-  gem.add_dependency('activesupport')
-  gem.add_dependency('locale')
-  gem.add_dependency('builder')
-  gem.add_dependency('i18n')
-  gem.add_dependency('treetop')
-  gem.add_dependency('polyglot')
-  gem.add_dependency('rdoc')
-  gem.add_dependency('sqlite3')
-  gem.add_dependency('activerecord')
-
-  gem.add_development_dependency('rspec')
-  gem.add_development_dependency('cucumber')
-  gem.add_development_dependency('guard')
-  gem.add_development_dependency('guard-rspec', '~>2.4.0')
-  gem.add_development_dependency('guard-cucumber')
-#  gem.add_development_dependency('ruby-debug19')
-  gem.add_development_dependency('spork', '> 1.0rc')
-  gem.add_development_dependency('guard-spork')
-  gem.add_development_dependency('simplecov')
-  gem.add_development_dependency('listen','0.6.0')
-  gem.add_development_dependency('rb-kqueue')
-  gem.add_development_dependency('libnotify')
-end
-

data/spec/lib/openehr/am/archetype/archetype_spec.rb

@@ -1,103 +0,0 @@
-require File.dirname(__FILE__) + '/../../../../spec_helper'
-require 'set'
-include OpenEHR::AM::Archetype
-include OpenEHR::AM::Archetype::ConstraintModel
-include OpenEHR::AM::Archetype::Ontology
-include OpenEHR::RM::DataTypes::Text
-include OpenEHR::RM::Common::Resource
-include OpenEHR::RM::Support::Identification
-
-describe Archetype do
-  before(:each) do
-    original_language = stub(CodePhrase, :code_string => 'ja')
-    archetype_id = ArchetypeID.new(:value => 'openEHR-EHR-SECTION.physical_examination-prenatal.v2')
-    definition = stub(CComplexObject, :rm_type_name => 'SECTION')
-    items = {'text' => 'Physical examination'}
-    term1 = ArchetypeTerm.new(:code => 'at0000', :items => items)
-    ontology = ArchetypeOntology.new(:specialisation_depth => 1, :term_definitions => {'ja' => {'at0000' =>term1}})
-    uid = HierObjectID.new(:value => 'ABCD::1')
-    parent_archetype_id = ArchetypeID.new(:value => 'openEHR-EHR-SECTION.physical_examination.v1')
-    invariants = stub(Set, :size => 2)
-    @archetype = Archetype.new(:original_language => original_language,
-                               :adl_version => '1.4',
-                               :archetype_id => archetype_id,
-                               :concept => 'at0000',
-                               :definition => definition,
-                               :ontology => ontology,
-                               :uid => uid,
-                               :parent_archetype_id => parent_archetype_id,
-                               :invariants => invariants)
-  end
-
-  it 'should be an instance of Archetype' do
-    @archetype.should be_an_instance_of Archetype
-  end
-
-  it 'adl_version should be assigned properly' do
-    @archetype.adl_version.should == '1.4'
-  end
-  
-  it 'archetype_id should be assigned prorperly' do
-    @archetype.archetype_id.value.should == 'openEHR-EHR-SECTION.physical_examination-prenatal.v2'
-  end
-
-  it 'should raise ArgumentError when archetype_id is nil' do
-    lambda {
-      @archetype.archetype_id = nil
-    }.should raise_error ArgumentError
-  end
-
-  it 'uid should be assigned properly' do
-    @archetype.uid.value.should == 'ABCD::1'
-  end
-
-  it 'concept should be assigned properly' do
-    @archetype.concept.should == 'at0000'
-  end
-
-  it 'should raise ArgumentError when concept is nil' do
-    lambda {
-      @archetype.concept = nil
-    }.should raise_error ArgumentError
-  end
-
-  it 'parent_archetype_id should be assigned properly' do
-    @archetype.parent_archetype_id.value.should == 'openEHR-EHR-SECTION.physical_examination.v1'
-  end
-
-  it 'definition should be assigned properly' do
-    @archetype.definition.rm_type_name.should == 'SECTION'
-  end
-
-  it 'should raise ArgumentError when definition is nil' do
-    lambda {
-      @archetype.definition = nil
-    }.should raise_error ArgumentError
-  end
-  
-  it 'ontology should be assigned properly' do
-    @archetype.ontology.specialisation_depth.should be_equal 1
-  end
-
-  it 'should raise ArgumentError when ontology is nil' do
-    lambda {
-      @archetype.ontology = nil
-    }.should raise_error ArgumentError
-  end
-
-  it 'invariants should be assigned properly' do
-    @archetype.invariants.size.should be_equal 2
-  end
-
-  it 'version should be extracted form id' do
-    @archetype.version.should == 'v2'
-  end
-
-  it 'short concept name should be extracted from archetype id' do
-    @archetype.short_concept_name.should == 'physical_examination'
-  end
-
-  it 'concept name should be extracted from ontology' do
-    @archetype.concept_name('ja').should == 'Physical examination'
-  end
-end