numo-libsvm 1.0.0 → 1.0.1

checksums.yaml

@@ -1,7 +1,7 @@
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data/.github/workflows/build.yml

@@ -0,0 +1,27 @@
+name: build
+
+on: [push, pull_request]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        ruby: [ '2.5', '2.6', '2.7' ]
+    steps:
+      - uses: actions/checkout@v2
+      - name: Checkout submodule
+        shell: bash
+        run: |
+          auth_header="$(git config --local --get http.https://github.com/.extraheader)"
+          git submodule sync --recursive
+          git -c "http.extraheader=$auth_header" -c protocol.version=2 submodule update --init --force --recursive --depth=1
+      - name: Set up Ruby ${{ matrix.ruby }}
+        uses: actions/setup-ruby@v1
+        with:
+          ruby-version: ${{ matrix.ruby }}
+      - name: Build and test with Rake
+        run: |
+          gem install bundler
+          bundle install --jobs 4 --retry 3
+          bundle exec rake

data/CHANGELOG.md

@@ -1,3 +1,7 @@
+# 1.0.1
+- Add GC guard codes.
+- Fix some configuration files.
+
 # 1.0.0
 ## Breaking change
 - For easy installation, Numo::LIBSVM bundles LIBSVM codes.

data/LICENSE.txt

@@ -1,4 +1,4 @@
-Copyright (c) 2019 Atsushi Tatsuma
+Copyright (c) 2019-2021 Atsushi Tatsuma
 All rights reserved.
 
 Redistribution and use in source and binary forms, with or without

data/README.md

@@ -1,9 +1,9 @@
 # Numo::Libsvm
 
-[![Build Status](https://travis-ci.org/yoshoku/numo-libsvm.svg?branch=master)](https://travis-ci.org/yoshoku/numo-libsvm)
+[![Build Status](https://github.com/yoshoku/numo-libsvm/workflows/build/badge.svg)](https://github.com/yoshoku/numo-libsvm/actions?query=workflow%3Abuild)
 [![Gem Version](https://badge.fury.io/rb/numo-libsvm.svg)](https://badge.fury.io/rb/numo-libsvm)
-[![BSD 3-Clause License](https://img.shields.io/badge/License-BSD%203--Clause-orange.svg)](https://github.com/yoshoku/numo-libsvm/blob/master/LICENSE.txt)
-[![Documentation](http://img.shields.io/badge/docs-rdoc.info-blue.svg)](https://www.rubydoc.info/gems/numo-libsvm/0.4.0)
+[![BSD 3-Clause License](https://img.shields.io/badge/License-BSD%203--Clause-orange.svg)](https://github.com/yoshoku/numo-libsvm/blob/main/LICENSE.txt)
+[![Documentation](https://img.shields.io/badge/api-reference-blue.svg)](https://yoshoku.github.io/numo-libsvm/doc/)
 
 Numo::Libsvm is a Ruby gem binding to the [LIBSVM](https://github.com/cjlin1/libsvm) library.
 LIBSVM is one of the famous libraries that implemented Support Vector Machines,
@@ -158,7 +158,7 @@ Accuracy: 98.3 %
 ### Note
 The hyperparameter of SVM is given with Ruby Hash on Numo::Libsvm.
 The hash key of hyperparameter and its meaning match the struct svm_parameter of LIBSVM.
-The svm_parameter is detailed in [LIBSVM README](https://github.com/cjlin1/libsvm/blob/master/README).
+The svm_parameter is detailed in [LIBSVM README](https://github.com/cjlin1/libsvm/blob/main/README).
 
 ```ruby
 param = {
@@ -197,4 +197,4 @@ The gem is available as open source under the terms of the [BSD-3-Clause License
 
 ## Code of Conduct
 
-Everyone interacting in the Numo::Libsvm project’s codebases, issue trackers, chat rooms and mailing lists is expected to follow the [code of conduct](https://github.com/yoshoku/numo-libsvm/blob/master/CODE_OF_CONDUCT.md).
+Everyone interacting in the Numo::Libsvm project’s codebases, issue trackers, chat rooms and mailing lists is expected to follow the [code of conduct](https://github.com/yoshoku/numo-libsvm/blob/main/CODE_OF_CONDUCT.md).

data/ext/numo/libsvm/converter.c

@@ -28,6 +28,8 @@ int* nary_to_int_vec(VALUE vec_val)
   vec_pt = (int32_t*)na_get_pointer_for_read(vec_val);
   for (i = 0; i < n_elements; i++) { vec[i] = (int)vec_pt[i]; }
 
+  RB_GC_GUARD(vec_val);
+
   return vec;
 }
 
@@ -57,6 +59,8 @@ double* nary_to_dbl_vec(VALUE vec_val)
   vec_pt = (double*)na_get_pointer_for_read(vec_val);
   memcpy(vec, vec_pt, n_elements * sizeof(double));
 
+  RB_GC_GUARD(vec_val);
+
   return vec;
 }
 
@@ -99,6 +103,8 @@ double** nary_to_dbl_mat(VALUE mat_val)
     }
   }
 
+  RB_GC_GUARD(mat_val);
+
   return mat;
 }
 
@@ -167,6 +173,8 @@ struct svm_node** nary_to_svm_nodes(VALUE nary_val)
     support_vecs[i][n_nonzero_cols].value = 0.0;
   }
 
+  RB_GC_GUARD(nary_val);
+
   return support_vecs;
 }
 

data/ext/numo/libsvm/libsvmext.c

@@ -114,6 +114,9 @@ VALUE train(VALUE self, VALUE x_val, VALUE y_val, VALUE param_hash)
   xfree_svm_problem(problem);
   xfree_svm_parameter(param);
 
+  RB_GC_GUARD(x_val);
+  RB_GC_GUARD(y_val);
+
   return model_hash;
 }
 
@@ -229,6 +232,9 @@ VALUE cross_validation(VALUE self, VALUE x_val, VALUE y_val, VALUE param_hash, V
   xfree_svm_problem(problem);
   xfree_svm_parameter(param);
 
+  RB_GC_GUARD(x_val);
+  RB_GC_GUARD(y_val);
+
   return t_val;
 }
 
@@ -295,6 +301,8 @@ VALUE predict(VALUE self, VALUE x_val, VALUE param_hash, VALUE model_hash)
   xfree_svm_model(model);
   xfree_svm_parameter(param);
 
+  RB_GC_GUARD(x_val);
+
   return y_val;
 }
 
@@ -385,6 +393,8 @@ VALUE decision_function(VALUE self, VALUE x_val, VALUE param_hash, VALUE model_h
   xfree_svm_model(model);
   xfree_svm_parameter(param);
 
+  RB_GC_GUARD(x_val);
+
   return y_val;
 }
 
@@ -460,6 +470,8 @@ VALUE predict_proba(VALUE self, VALUE x_val, VALUE param_hash, VALUE model_hash)
   xfree_svm_model(model);
   xfree_svm_parameter(param);
 
+  RB_GC_GUARD(x_val);
+
   return y_val;
 }
 

data/ext/numo/libsvm/svm_problem.c

@@ -83,5 +83,8 @@ struct svm_problem* dataset_to_svm_problem(VALUE x_val, VALUE y_val)
     problem->y[i] = y_pt[i];
   }
 
+  RB_GC_GUARD(x_val);
+  RB_GC_GUARD(y_val);
+
   return problem;
 }

data/lib/numo/libsvm/version.rb

@@ -3,6 +3,6 @@
 module Numo
   module Libsvm
     # The version of Numo::Libsvm you are using.
-    VERSION = '1.0.0'
+    VERSION = '1.0.1'
   end
 end

data/numo-libsvm.gemspec

@@ -49,7 +49,7 @@ Gem::Specification.new do |spec|
   spec.add_runtime_dependency 'numo-narray', '~> 0.9.1'
 
   spec.add_development_dependency 'bundler', '~> 2.0'
-  spec.add_development_dependency 'rake', '~> 10.0'
+  spec.add_development_dependency 'rake', '~> 12.0'
   spec.add_development_dependency 'rake-compiler', '~> 1.0'
   spec.add_development_dependency 'rspec', '~> 3.0'
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: numo-libsvm
 version: !ruby/object:Gem::Version
-  version: 1.0.0
+  version: 1.0.1
 platform: ruby
 authors:
 - yoshoku
-autorequire: 
+autorequire:
 bindir: exe
 cert_chain: []
-date: 2019-10-12 00:00:00.000000000 Z
+date: 2021-01-16 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: numo-narray
@@ -44,14 +44,14 @@ dependencies:
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '10.0'
+        version: '12.0'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '10.0'
+        version: '12.0'
 - !ruby/object:Gem::Dependency
   name: rake-compiler
   requirement: !ruby/object:Gem::Requirement
@@ -92,10 +92,10 @@ extensions:
 - ext/numo/libsvm/extconf.rb
 extra_rdoc_files: []
 files:
+- ".github/workflows/build.yml"
 - ".gitignore"
 - ".gitmodules"
 - ".rspec"
-- ".travis.yml"
 - CHANGELOG.md
 - CODE_OF_CONDUCT.md
 - Gemfile
@@ -129,7 +129,7 @@ metadata:
   homepage_uri: https://github.com/yoshoku/numo-libsvm
   source_code_uri: https://github.com/yoshoku/numo-libsvm
   documentation_uri: https://yoshoku.github.io/numo-libsvm/doc/
-post_install_message: 
+post_install_message:
 rdoc_options: []
 require_paths:
 - lib
@@ -144,9 +144,8 @@ required_rubygems_version: !ruby/object:Gem::Requirement
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
-rubyforge_project: 
-rubygems_version: 2.6.14.4
-signing_key: 
+rubygems_version: 3.1.4
+signing_key:
 specification_version: 4
 summary: Numo::Libsvm is a Ruby gem binding to the LIBSVM library. Numo::Libsvm makes
   to use the LIBSVM functions with dataset represented by Numo::NArray.

data/.travis.yml

@@ -1,13 +0,0 @@
----
-sudo: true
-os: linux
-dist: bionic
-language: ruby
-cache: bundler
-rvm:
-  - '2.4'
-  - '2.5'
-  - '2.6'
-
-before_install:
-  - gem install bundler -v 2.0.2