nmatrix-lapacke 0.2.1 → 0.2.3
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/ext/nmatrix/data/data.h +7 -8
- data/ext/nmatrix/data/ruby_object.h +1 -4
- data/ext/nmatrix/math/asum.h +10 -31
- data/ext/nmatrix/math/cblas_templates_core.h +10 -10
- data/ext/nmatrix/math/getrf.h +2 -2
- data/ext/nmatrix/math/imax.h +12 -9
- data/ext/nmatrix/math/laswp.h +3 -3
- data/ext/nmatrix/math/long_dtype.h +16 -3
- data/ext/nmatrix/math/magnitude.h +54 -0
- data/ext/nmatrix/math/nrm2.h +19 -14
- data/ext/nmatrix/math/trsm.h +40 -36
- data/ext/nmatrix/math/util.h +14 -0
- data/ext/nmatrix/nmatrix.h +39 -1
- data/ext/nmatrix/storage/common.h +9 -3
- data/ext/nmatrix/storage/yale/class.h +1 -1
- data/ext/nmatrix_lapacke/extconf.rb +3 -136
- data/ext/nmatrix_lapacke/lapacke.cpp +104 -84
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_cgeqrf.c +77 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_cgeqrf_work.c +89 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_cunmqr.c +88 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_cunmqr_work.c +111 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_dgeqrf.c +75 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_dgeqrf_work.c +87 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_dormqr.c +86 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_dormqr_work.c +109 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_sgeqrf.c +75 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_sgeqrf_work.c +87 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_sormqr.c +86 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_sormqr_work.c +109 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_zgeqrf.c +77 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_zgeqrf_work.c +89 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_zunmqr.c +88 -0
- data/ext/nmatrix_lapacke/lapacke/src/lapacke_zunmqr_work.c +111 -0
- data/ext/nmatrix_lapacke/lapacke/utils/lapacke_c_nancheck.c +51 -0
- data/ext/nmatrix_lapacke/lapacke/utils/lapacke_d_nancheck.c +51 -0
- data/ext/nmatrix_lapacke/lapacke/utils/lapacke_s_nancheck.c +51 -0
- data/ext/nmatrix_lapacke/lapacke/utils/lapacke_z_nancheck.c +51 -0
- data/ext/nmatrix_lapacke/math_lapacke.cpp +149 -17
- data/ext/nmatrix_lapacke/math_lapacke/lapacke_templates.h +76 -0
- data/lib/nmatrix/lapacke.rb +118 -0
- data/spec/00_nmatrix_spec.rb +50 -1
- data/spec/02_slice_spec.rb +21 -21
- data/spec/blas_spec.rb +25 -3
- data/spec/math_spec.rb +233 -5
- data/spec/plugins/lapacke/lapacke_spec.rb +187 -0
- data/spec/shortcuts_spec.rb +145 -5
- data/spec/spec_helper.rb +24 -1
- metadata +38 -8
@@ -298,6 +298,193 @@ describe "NMatrix::LAPACK functions implemented with LAPACKE interface" do
|
|
298
298
|
expect(vr).to be_within(err).of(vr_true)
|
299
299
|
expect(vl).to be_within(err).of(vl_true)
|
300
300
|
end
|
301
|
+
|
302
|
+
it "exposes lapacke_geqrf" do
|
303
|
+
a = NMatrix.new(3, [12.0, -51.0, 4.0,
|
304
|
+
6.0, 167.0, -68.0,
|
305
|
+
-4.0, 24.0, -41.0] , dtype: dtype)
|
306
|
+
|
307
|
+
b = NMatrix.new([3,1], 0, dtype: dtype)
|
308
|
+
|
309
|
+
NMatrix::LAPACK::lapacke_geqrf(:row, a.shape[0], a.shape[1], a, a.shape[1], b)
|
310
|
+
|
311
|
+
x = NMatrix.new([3,1], TAU_SOLUTION_ARRAY, dtype: dtype)
|
312
|
+
|
313
|
+
y = NMatrix.new([3,3], GEQRF_SOLUTION_ARRAY, dtype: dtype)
|
314
|
+
|
315
|
+
err = case dtype
|
316
|
+
when :float32, :complex64
|
317
|
+
1e-4
|
318
|
+
when :float64, :complex128
|
319
|
+
1e-14
|
320
|
+
end
|
321
|
+
|
322
|
+
expect(b).to be_within(err).of(x)
|
323
|
+
expect(a).to be_within(err).of(y)
|
324
|
+
end
|
325
|
+
|
326
|
+
it "calculates QR decomposition in a compressed format using geqrf!" do
|
327
|
+
a = NMatrix.new(3, [12.0, -51.0, 4.0,
|
328
|
+
6.0, 167.0, -68.0,
|
329
|
+
-4.0, 24.0, -41.0] , dtype: dtype)
|
330
|
+
|
331
|
+
tau = a.geqrf!
|
332
|
+
|
333
|
+
x = NMatrix.new([3,1], TAU_SOLUTION_ARRAY, dtype: dtype)
|
334
|
+
|
335
|
+
y = NMatrix.new([3,3], GEQRF_SOLUTION_ARRAY, dtype: dtype)
|
336
|
+
|
337
|
+
err = case dtype
|
338
|
+
when :float32, :complex64
|
339
|
+
1e-4
|
340
|
+
when :float64, :complex128
|
341
|
+
1e-14
|
342
|
+
end
|
343
|
+
|
344
|
+
expect(tau).to be_within(err).of(x)
|
345
|
+
expect(a).to be_within(err).of(y)
|
346
|
+
end
|
347
|
+
|
348
|
+
it "exposes lapacke_ormqr and lapacke_unmqr" do
|
349
|
+
a = NMatrix.new([4,2], [34.0, 21.0,
|
350
|
+
23.0, 53.0,
|
351
|
+
26.0, 346.0,
|
352
|
+
23.0, 121.0] , dtype: dtype)
|
353
|
+
|
354
|
+
tau = NMatrix.new([2,1], dtype: dtype)
|
355
|
+
result = NMatrix.identity(4, dtype: dtype)
|
356
|
+
|
357
|
+
# get tau from geqrf, use for ormqr
|
358
|
+
NMatrix::LAPACK::lapacke_geqrf(:row, a.shape[0], a.shape[1], a, a.shape[1], tau)
|
359
|
+
|
360
|
+
#Q is stored in result
|
361
|
+
a.complex_dtype? ?
|
362
|
+
NMatrix::LAPACK::lapacke_unmqr(:row, :left, false, result.shape[0], result.shape[1], tau.shape[0],
|
363
|
+
a, a.shape[1], tau, result, result.shape[1])
|
364
|
+
:
|
365
|
+
|
366
|
+
NMatrix::LAPACK::lapacke_ormqr(:row, :left, false, result.shape[0], result.shape[1], tau.shape[0],
|
367
|
+
a, a.shape[1], tau, result, result.shape[1])
|
368
|
+
|
369
|
+
x = NMatrix.new([4,4], Q_SOLUTION_ARRAY_1, dtype: dtype)
|
370
|
+
|
371
|
+
err = case dtype
|
372
|
+
when :float32, :complex64
|
373
|
+
1e-4
|
374
|
+
when :float64, :complex128
|
375
|
+
1e-14
|
376
|
+
end
|
377
|
+
|
378
|
+
expect(result).to be_within(err).of(x)
|
379
|
+
end
|
380
|
+
|
381
|
+
it "calculates the product of the orthogonal matrix with an arbitrary matrix" do
|
382
|
+
a = N.new([2,2], [34.0, 21, 23, 53] , dtype: dtype)
|
383
|
+
|
384
|
+
tau = NMatrix.new([2,1], dtype: dtype)
|
385
|
+
|
386
|
+
#Result is the multiplicand that gets overriden : result = Q * result
|
387
|
+
result = NMatrix.new([2,2], [2,0,0,2], dtype: dtype)
|
388
|
+
|
389
|
+
# get tau from geqrf, use for ormqr
|
390
|
+
NMatrix::LAPACK::lapacke_geqrf(:row, a.shape[0], a.shape[1], a, a.shape[1], tau)
|
391
|
+
|
392
|
+
#Q is stored in result
|
393
|
+
a.complex_dtype? ?
|
394
|
+
NMatrix::LAPACK::lapacke_unmqr(:row, :left, false, result.shape[0], result.shape[1], tau.shape[0],
|
395
|
+
a, a.shape[1], tau, result, result.shape[1])
|
396
|
+
:
|
397
|
+
|
398
|
+
NMatrix::LAPACK::lapacke_ormqr(:row, :left, false, result.shape[0], result.shape[1], tau.shape[0],
|
399
|
+
a, a.shape[1], tau, result, result.shape[1])
|
400
|
+
|
401
|
+
x = NMatrix.new([2,2], [-1.6565668262559257 , -1.1206187354084205,
|
402
|
+
-1.1206187354084205 , 1.6565668262559263], dtype: dtype)
|
403
|
+
|
404
|
+
err = case dtype
|
405
|
+
when :float32, :complex64
|
406
|
+
1e-4
|
407
|
+
when :float64, :complex128
|
408
|
+
1e-14
|
409
|
+
end
|
410
|
+
|
411
|
+
expect(result).to be_within(err).of(x)
|
412
|
+
end
|
413
|
+
|
414
|
+
it "calculates the orthogonal matrix Q using ormqr/unmqr after geqrf!" do
|
415
|
+
a = NMatrix.new([4,2], [34.0, 21.0,
|
416
|
+
23.0, 53.0,
|
417
|
+
26.0, 346.0,
|
418
|
+
23.0, 121.0] , dtype: dtype)
|
419
|
+
|
420
|
+
# get tau from geqrf, use for ormqr
|
421
|
+
tau = a.geqrf!
|
422
|
+
|
423
|
+
#Q is stored in result
|
424
|
+
result = a.complex_dtype? ? a.unmqr(tau) : a.ormqr(tau)
|
425
|
+
|
426
|
+
|
427
|
+
x = NMatrix.new([4,4], Q_SOLUTION_ARRAY_1, dtype: dtype)
|
428
|
+
|
429
|
+
err = case dtype
|
430
|
+
when :float32, :complex64
|
431
|
+
1e-4
|
432
|
+
when :float64, :complex128
|
433
|
+
1e-14
|
434
|
+
end
|
435
|
+
|
436
|
+
expect(result).to be_within(err).of(x)
|
437
|
+
end
|
438
|
+
end
|
439
|
+
|
440
|
+
it "calculates the transpose of Q using ormqr/unmqr after geqrf!" do
|
441
|
+
a = NMatrix.new([4,2], [34.0, 21.0,
|
442
|
+
23.0, 53.0,
|
443
|
+
26.0, 346.0,
|
444
|
+
23.0, 121.0] , dtype: dtype)
|
445
|
+
|
446
|
+
# get tau from geqrf, use for ormqr
|
447
|
+
tau = a.geqrf!
|
448
|
+
|
449
|
+
#Q is stored in result
|
450
|
+
result = a.complex_dtype? ? a.unmqr(tau, :left, :complex_conjugate) : a.ormqr(tau, :left, :transpose)
|
451
|
+
|
452
|
+
|
453
|
+
x = NMatrix.new([4,4], Q_SOLUTION_ARRAY_1, dtype: dtype)
|
454
|
+
x = x.transpose
|
455
|
+
|
456
|
+
err = case dtype
|
457
|
+
when :float32, :complex64
|
458
|
+
1e-4
|
459
|
+
when :float64, :complex128
|
460
|
+
1e-14
|
461
|
+
end
|
462
|
+
|
463
|
+
expect(result).to be_within(err).of(x)
|
464
|
+
end
|
465
|
+
|
466
|
+
it "calculates the multiplication c * Q using ormqr/unmqr after geqrf!" do
|
467
|
+
a = NMatrix.new(3, [12.0, -51.0, 4.0,
|
468
|
+
6.0, 167.0, -68.0,
|
469
|
+
-4.0, 24.0, -41.0] , dtype: dtype)
|
470
|
+
|
471
|
+
# get tau from geqrf, use for ormqr
|
472
|
+
tau = a.geqrf!
|
473
|
+
c = NMatrix.new([2,3], [1,0,1,0,0,1], dtype: dtype)
|
474
|
+
|
475
|
+
#Q is stored in result
|
476
|
+
result = a.complex_dtype? ? a.unmqr(tau, :right, false, c) : a.ormqr(tau, :right, false, c)
|
477
|
+
|
478
|
+
solution = NMatrix.new([2,3], [-0.5714285714285714, 0.2228571428571429, 1.2742857142857142,
|
479
|
+
0.28571428571428575, -0.1714285714285714, 0.9428571428571428] , dtype: dtype)
|
480
|
+
err = case dtype
|
481
|
+
when :float32, :complex64
|
482
|
+
1e-4
|
483
|
+
when :float64, :complex128
|
484
|
+
1e-14
|
485
|
+
end
|
486
|
+
|
487
|
+
expect(result).to be_within(err).of(solution)
|
301
488
|
end
|
302
489
|
end
|
303
490
|
end
|
data/spec/shortcuts_spec.rb
CHANGED
@@ -50,10 +50,45 @@ describe NMatrix do
|
|
50
50
|
expect(m).to eq identity3
|
51
51
|
end
|
52
52
|
|
53
|
+
it "hilbert() creates an hilbert matrix" do
|
54
|
+
m = NMatrix.hilbert(8)
|
55
|
+
expect(m[4, 0]).to be_within(0.000001).of(0.2)
|
56
|
+
expect(m[4, 1]).to be_within(0.000001).of(0.16666666666666666)
|
57
|
+
expect(m[4, 2]).to be_within(0.000001).of(0.14285714285714285)
|
58
|
+
expect(m[4, 3]).to be_within(0.000001).of(0.125)
|
59
|
+
|
60
|
+
m = NMatrix.hilbert(3)
|
61
|
+
hilbert3 = NMatrix.new([3, 3], [1.0, 0.5, 0.3333333333333333,\
|
62
|
+
0.5, 0.3333333333333333, 0.25, 0.3333333333333333, 0.25, 0.2])
|
63
|
+
expect(m).to eq hilbert3
|
64
|
+
0.upto(2) do |i|
|
65
|
+
0.upto(2) do |j|
|
66
|
+
expect(m[i, j]).to be_within(0.000001).of(hilbert3[i,j])
|
67
|
+
end
|
68
|
+
end
|
69
|
+
end
|
70
|
+
|
71
|
+
it "inv_hilbert() creates an inverse hilbert matrix" do
|
72
|
+
m = NMatrix.inv_hilbert(6)
|
73
|
+
inv_hilbert6 = [3360.0, -88200.0, 564480.0, -1411200.0]
|
74
|
+
expect(m[2,0]).to be_within(0.000001).of(inv_hilbert6[0])
|
75
|
+
expect(m[2,1]).to be_within(0.000001).of(inv_hilbert6[1])
|
76
|
+
expect(m[2,2]).to be_within(0.000001).of(inv_hilbert6[2])
|
77
|
+
expect(m[2,3]).to be_within(0.000001).of(inv_hilbert6[3])
|
78
|
+
|
79
|
+
m = NMatrix.inv_hilbert(3)
|
80
|
+
inv_hilbert3 = NMatrix.new([3, 3], [ 9.0, -36.0, 30.0, -36.0, 192.0, -180.0, 30.0, -180.0, 180.0] )
|
81
|
+
0.upto(2) do |i|
|
82
|
+
0.upto(2) do |j|
|
83
|
+
expect(m[i, j]).to be_within(0.000001).of(inv_hilbert3[i,j])
|
84
|
+
end
|
85
|
+
end
|
86
|
+
end
|
87
|
+
|
53
88
|
it "diag() creates a matrix with pre-supplied diagonal" do
|
54
89
|
arr = [1,2,3,4]
|
55
90
|
m = NMatrix.diag(arr)
|
56
|
-
expect(m.is_a?(NMatrix)).to
|
91
|
+
expect(m.is_a?(NMatrix)).to be true
|
57
92
|
end
|
58
93
|
|
59
94
|
it "diagonals() contains the seeded values on the diagonal" do
|
@@ -123,6 +158,112 @@ describe NMatrix do
|
|
123
158
|
expect { NMatrix.random("not an array or integer") }.to raise_error
|
124
159
|
end
|
125
160
|
end
|
161
|
+
|
162
|
+
context "::magic" do
|
163
|
+
|
164
|
+
ALL_DTYPES.each do |dtype|
|
165
|
+
context dtype do
|
166
|
+
it "creates a matrix with numbers from 1 to n^n(n squared)" do
|
167
|
+
a = NMatrix.magic(3, dtype: dtype)
|
168
|
+
magic3 = NMatrix.new([3,3], [4, 9, 2, 3, 5, 7, 8, 1, 6], dtype: dtype)
|
169
|
+
expect(a).to eq magic3
|
170
|
+
|
171
|
+
b = NMatrix.magic(4, dtype: dtype)
|
172
|
+
magic4 = NMatrix.new([4,4], [1, 15, 14, 4, 12, 6, 7, 9, 8, 10, 11, 5, 13, 3, 2, 16], dtype: dtype)
|
173
|
+
expect(b).to eq magic4
|
174
|
+
|
175
|
+
c = NMatrix.magic(6, dtype: dtype)
|
176
|
+
magic6 = NMatrix.new([6,6], [31, 9, 2, 22, 27, 20, 3, 32, 7, 21, 23, 25, 35, 1, 6, 26, 19, 24, 4, 36, 29, 13, 18, 11, 30, 5, 34, 12, 14, 16, 8, 28, 33, 17, 10, 15], dtype: dtype)
|
177
|
+
expect(c).to eq magic6
|
178
|
+
end
|
179
|
+
end
|
180
|
+
end
|
181
|
+
|
182
|
+
it "shape of two is not allowed" do
|
183
|
+
expect { NMatrix.magic(2) }.to raise_error(ArgumentError)
|
184
|
+
end
|
185
|
+
|
186
|
+
it "Only accepts an integer as dimension" do
|
187
|
+
expect { NMatrix.magic(3.0) }.to raise_error(ArgumentError)
|
188
|
+
end
|
189
|
+
end
|
190
|
+
|
191
|
+
context "::linspace" do
|
192
|
+
it "creates a row vector when given only one shape parameter" do
|
193
|
+
v = NMatrix.linspace(1, 10, 4)
|
194
|
+
#Expect a row vector only
|
195
|
+
expect(v.shape.length).to eq(1)
|
196
|
+
|
197
|
+
ans = [1.0,4.0,7.0,10.0]
|
198
|
+
|
199
|
+
expect(v[0]).to be_within(0.000001).of(ans[0])
|
200
|
+
expect(v[1]).to be_within(0.000001).of(ans[1])
|
201
|
+
expect(v[2]).to be_within(0.000001).of(ans[2])
|
202
|
+
expect(v[3]).to be_within(0.000001).of(ans[3])
|
203
|
+
end
|
204
|
+
|
205
|
+
it "creates a matrix of input shape with each entry linearly spaced in row major order" do
|
206
|
+
v = NMatrix.linspace(1, Math::PI, [2,2])
|
207
|
+
expect(v.dtype).to eq(:float64)
|
208
|
+
|
209
|
+
ans = [1.0, 1.7138642072677612, 2.4277284145355225, 3.1415927410125732]
|
210
|
+
|
211
|
+
expect(v[0,0]).to be_within(0.000001).of(ans[0])
|
212
|
+
expect(v[0,1]).to be_within(0.000001).of(ans[1])
|
213
|
+
expect(v[1,0]).to be_within(0.000001).of(ans[2])
|
214
|
+
expect(v[1,1]).to be_within(0.000001).of(ans[3])
|
215
|
+
end
|
216
|
+
end
|
217
|
+
|
218
|
+
context "::logspace" do
|
219
|
+
it "creates a logarithmically spaced vector" do
|
220
|
+
v = NMatrix.logspace(1, 2, 10)
|
221
|
+
|
222
|
+
expect(v.shape.length).to eq(1)
|
223
|
+
|
224
|
+
#Unit test taken from Matlab R2015b output of logspace(1,2,10)
|
225
|
+
ans = [10.0000, 12.9155, 16.6810, 21.5443, 27.8256, 35.9381, 46.4159, 59.9484, 77.4264, 100.0000]
|
226
|
+
|
227
|
+
expect(v[0].round(4)).to be_within(0.000001).of(ans[0])
|
228
|
+
expect(v[1].round(4)).to be_within(0.000001).of(ans[1])
|
229
|
+
expect(v[2].round(4)).to be_within(0.000001).of(ans[2])
|
230
|
+
expect(v[3].round(4)).to be_within(0.000001).of(ans[3])
|
231
|
+
expect(v[4].round(4)).to be_within(0.000001).of(ans[4])
|
232
|
+
expect(v[5].round(4)).to be_within(0.000001).of(ans[5])
|
233
|
+
expect(v[6].round(4)).to be_within(0.000001).of(ans[6])
|
234
|
+
expect(v[7].round(4)).to be_within(0.000001).of(ans[7])
|
235
|
+
expect(v[8].round(4)).to be_within(0.000001).of(ans[8])
|
236
|
+
expect(v[9].round(4)).to be_within(0.000001).of(ans[9])
|
237
|
+
end
|
238
|
+
|
239
|
+
it "creates a logarithmically spaced vector bounded by Math::PI if :pi is pre-supplied" do
|
240
|
+
v = NMatrix.logspace(1, :pi, 7)
|
241
|
+
|
242
|
+
#Unit test taken from Matlab R2015b output of logspace(1,pi,10)
|
243
|
+
ans = [10.0000, 8.2450, 6.7980, 5.6050, 4.6213, 3.8103, 3.1416]
|
244
|
+
|
245
|
+
expect(v[0].round(4)).to be_within(0.000001).of(ans[0])
|
246
|
+
expect(v[1].round(4)).to be_within(0.000001).of(ans[1])
|
247
|
+
expect(v[2].round(4)).to be_within(0.000001).of(ans[2])
|
248
|
+
expect(v[3].round(4)).to be_within(0.000001).of(ans[3])
|
249
|
+
expect(v[4].round(4)).to be_within(0.000001).of(ans[4])
|
250
|
+
expect(v[5].round(4)).to be_within(0.000001).of(ans[5])
|
251
|
+
expect(v[6].round(4)).to be_within(0.000001).of(ans[6])
|
252
|
+
end
|
253
|
+
|
254
|
+
it "creates a matrix of input shape with each entry logarithmically spaced in row major order" do
|
255
|
+
v = NMatrix.logspace(1, 2, [3,2])
|
256
|
+
|
257
|
+
ans = [10.0, 15.8489, 25.1189, 39.8107, 63.0957, 100.0]
|
258
|
+
|
259
|
+
expect(v[0,0].round(4)).to be_within(0.000001).of(ans[0])
|
260
|
+
expect(v[0,1].round(4)).to be_within(0.000001).of(ans[1])
|
261
|
+
expect(v[1,0].round(4)).to be_within(0.000001).of(ans[2])
|
262
|
+
expect(v[1,1].round(4)).to be_within(0.000001).of(ans[3])
|
263
|
+
expect(v[2,0].round(4)).to be_within(0.000001).of(ans[4])
|
264
|
+
expect(v[2,1].round(4)).to be_within(0.000001).of(ans[5])
|
265
|
+
end
|
266
|
+
end
|
126
267
|
|
127
268
|
it "seq() creates a matrix of integers, sequentially" do
|
128
269
|
m = NMatrix.seq(2) # 2x2 matrix.
|
@@ -136,7 +277,6 @@ describe NMatrix do
|
|
136
277
|
end
|
137
278
|
end
|
138
279
|
|
139
|
-
|
140
280
|
it "indgen() creates a matrix of integers as well as seq()" do
|
141
281
|
m = NMatrix.indgen(2) # 2x2 matrix.
|
142
282
|
value = 0
|
@@ -189,19 +329,19 @@ describe NMatrix do
|
|
189
329
|
it "column() returns a NMatrix" do
|
190
330
|
m = NMatrix.random(3)
|
191
331
|
|
192
|
-
expect(m.column(2).is_a?(NMatrix)).to
|
332
|
+
expect(m.column(2).is_a?(NMatrix)).to be true
|
193
333
|
end
|
194
334
|
|
195
335
|
it "row() returns a NMatrix" do
|
196
336
|
m = NMatrix.random(3)
|
197
337
|
|
198
|
-
expect(m.row(2).is_a?(NMatrix)).to
|
338
|
+
expect(m.row(2).is_a?(NMatrix)).to be true
|
199
339
|
end
|
200
340
|
|
201
341
|
it "diagonals() creates an NMatrix" do
|
202
342
|
arr = [1,2,3,4]
|
203
343
|
m = NMatrix.diagonals(arr)
|
204
|
-
expect(m.is_a?(NMatrix)).to
|
344
|
+
expect(m.is_a?(NMatrix)).to be true
|
205
345
|
end
|
206
346
|
|
207
347
|
it "diagonals() contains the seeded values on the diagonal" do
|
data/spec/spec_helper.rb
CHANGED
@@ -32,7 +32,7 @@ require "./lib/nmatrix/rspec"
|
|
32
32
|
|
33
33
|
ALL_DTYPES = [:byte,:int8,:int16,:int32,:int64, :float32,:float64, :object,
|
34
34
|
:complex64, :complex128]
|
35
|
-
|
35
|
+
|
36
36
|
NON_INTEGER_DTYPES = [:float32, :float64, :complex64, :complex128,
|
37
37
|
:object]
|
38
38
|
|
@@ -48,6 +48,29 @@ COMPLEX_MATRIX32A_ARRAY = MATRIX32A_ARRAY.zip(MATRIX32A_ARRAY.reverse).collect {
|
|
48
48
|
GETRF_EXAMPLE_ARRAY = [-1,0,10,4,9,2,3,5,7,8,1,6]
|
49
49
|
GETRF_SOLUTION_ARRAY = [9.0, 2.0, 3.0, 5.0, 7.0/9, 58.0/9, -4.0/3, 19.0/9, -1.0/9, 1.0/29, 301.0/29, 130.0/29]
|
50
50
|
|
51
|
+
TAU_SOLUTION_ARRAY = [1.8571428571428572,1.9938461538461538, 0.0]
|
52
|
+
|
53
|
+
GEQRF_SOLUTION_ARRAY =[ -14.0, -21.0, 14.000000000000002,
|
54
|
+
0.23076923076923078, -175.00000000000003, 70.00000000000001,
|
55
|
+
-0.15384615384615385, 0.055555555555555546, -35.0]
|
56
|
+
|
57
|
+
R_SOLUTION_ARRAY = [-159.2388143638353, -41.00131005172065, -56.75123892439876, -90.75048729628048,
|
58
|
+
0.0, 25.137473501580676, 2.073591725046292, 9.790607357775713,
|
59
|
+
0.0, 0.0, -20.83259700334131, -17.592414929551445]
|
60
|
+
|
61
|
+
Q_SOLUTION_ARRAY_1 = [-0.632455532033676, -0.5209522876558295, -0.3984263084135902, -0.41214704991068,
|
62
|
+
-0.42783756578748666, -0.20837937347171134, 0.876505919951498, 0.07259770177184455,
|
63
|
+
-0.48364246567281094, 0.8265854747306287,-0.015758658987033422, -0.2873988222474053,
|
64
|
+
-0.42783756578748666, 0.044081783789183565, -0.26971376257215296, 0.8615487797670971]
|
65
|
+
|
66
|
+
Q_SOLUTION_ARRAY_2 = [-0.8571428571428572, 0.3942857142857143, 0.33142857142857146,
|
67
|
+
-0.4285714285714286, -0.9028571428571428, -0.03428571428571425,
|
68
|
+
0.28571428571428575, -0.1714285714285714, 0.9428571428571428]
|
69
|
+
|
70
|
+
Q_SOLUTION_ARRAY_3 = [-0.7724247413634004, -0.026670393594597247, -0.6345460653374136,
|
71
|
+
-0.5777485870360393, -0.38541856437557026, 0.7194853024298236,
|
72
|
+
-0.26375478973384403, 0.9223563413020934, 0.28229805268947933]
|
73
|
+
|
51
74
|
def create_matrix(stype) #:nodoc:
|
52
75
|
m = NMatrix.new([3,3], 0, dtype: :int32, stype: stype, default: 0)
|
53
76
|
|
metadata
CHANGED
@@ -1,16 +1,15 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: nmatrix-lapacke
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.2.
|
4
|
+
version: 0.2.3
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
|
+
- Will Levine
|
7
8
|
- John Woods
|
8
|
-
- Chris Wailes
|
9
|
-
- Aleksey Timin
|
10
9
|
autorequire:
|
11
10
|
bindir: bin
|
12
11
|
cert_chain: []
|
13
|
-
date: 2016-
|
12
|
+
date: 2016-07-25 00:00:00.000000000 Z
|
14
13
|
dependencies:
|
15
14
|
- !ruby/object:Gem::Dependency
|
16
15
|
name: nmatrix
|
@@ -18,14 +17,14 @@ dependencies:
|
|
18
17
|
requirements:
|
19
18
|
- - '='
|
20
19
|
- !ruby/object:Gem::Version
|
21
|
-
version: 0.2.
|
20
|
+
version: 0.2.3
|
22
21
|
type: :runtime
|
23
22
|
prerelease: false
|
24
23
|
version_requirements: !ruby/object:Gem::Requirement
|
25
24
|
requirements:
|
26
25
|
- - '='
|
27
26
|
- !ruby/object:Gem::Version
|
28
|
-
version: 0.2.
|
27
|
+
version: 0.2.3
|
29
28
|
description: For using linear algebra fuctions provided by LAPACK and BLAS
|
30
29
|
email:
|
31
30
|
- john.o.woods@gmail.com
|
@@ -48,6 +47,7 @@ files:
|
|
48
47
|
- ext/nmatrix/math/imax.h
|
49
48
|
- ext/nmatrix/math/laswp.h
|
50
49
|
- ext/nmatrix/math/long_dtype.h
|
50
|
+
- ext/nmatrix/math/magnitude.h
|
51
51
|
- ext/nmatrix/math/math.h
|
52
52
|
- ext/nmatrix/math/nrm2.h
|
53
53
|
- ext/nmatrix/math/rot.h
|
@@ -84,6 +84,8 @@ files:
|
|
84
84
|
- ext/nmatrix_lapacke/lapacke/include/lapacke_utils.h
|
85
85
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgeev.c
|
86
86
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgeev_work.c
|
87
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgeqrf.c
|
88
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgeqrf_work.c
|
87
89
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgesdd.c
|
88
90
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgesdd_work.c
|
89
91
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cgesvd.c
|
@@ -100,8 +102,12 @@ files:
|
|
100
102
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cpotri_work.c
|
101
103
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cpotrs.c
|
102
104
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_cpotrs_work.c
|
105
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_cunmqr.c
|
106
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_cunmqr_work.c
|
103
107
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgeev.c
|
104
108
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgeev_work.c
|
109
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgeqrf.c
|
110
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgeqrf_work.c
|
105
111
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgesdd.c
|
106
112
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgesdd_work.c
|
107
113
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgesvd.c
|
@@ -112,6 +118,8 @@ files:
|
|
112
118
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgetri_work.c
|
113
119
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgetrs.c
|
114
120
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dgetrs_work.c
|
121
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_dormqr.c
|
122
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_dormqr_work.c
|
115
123
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dpotrf.c
|
116
124
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dpotrf_work.c
|
117
125
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dpotri.c
|
@@ -120,6 +128,8 @@ files:
|
|
120
128
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_dpotrs_work.c
|
121
129
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgeev.c
|
122
130
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgeev_work.c
|
131
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgeqrf.c
|
132
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgeqrf_work.c
|
123
133
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgesdd.c
|
124
134
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgesdd_work.c
|
125
135
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgesvd.c
|
@@ -130,6 +140,8 @@ files:
|
|
130
140
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgetri_work.c
|
131
141
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgetrs.c
|
132
142
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_sgetrs_work.c
|
143
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_sormqr.c
|
144
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_sormqr_work.c
|
133
145
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_spotrf.c
|
134
146
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_spotrf_work.c
|
135
147
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_spotri.c
|
@@ -138,6 +150,8 @@ files:
|
|
138
150
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_spotrs_work.c
|
139
151
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgeev.c
|
140
152
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgeev_work.c
|
153
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgeqrf.c
|
154
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgeqrf_work.c
|
141
155
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgesdd.c
|
142
156
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgesdd_work.c
|
143
157
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zgesvd.c
|
@@ -154,12 +168,16 @@ files:
|
|
154
168
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zpotri_work.c
|
155
169
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zpotrs.c
|
156
170
|
- ext/nmatrix_lapacke/lapacke/src/lapacke_zpotrs_work.c
|
171
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_zunmqr.c
|
172
|
+
- ext/nmatrix_lapacke/lapacke/src/lapacke_zunmqr_work.c
|
173
|
+
- ext/nmatrix_lapacke/lapacke/utils/lapacke_c_nancheck.c
|
157
174
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_cge_nancheck.c
|
158
175
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_cge_trans.c
|
159
176
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_cpo_nancheck.c
|
160
177
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_cpo_trans.c
|
161
178
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_ctr_nancheck.c
|
162
179
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_ctr_trans.c
|
180
|
+
- ext/nmatrix_lapacke/lapacke/utils/lapacke_d_nancheck.c
|
163
181
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_dge_nancheck.c
|
164
182
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_dge_trans.c
|
165
183
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_dpo_nancheck.c
|
@@ -167,6 +185,7 @@ files:
|
|
167
185
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_dtr_nancheck.c
|
168
186
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_dtr_trans.c
|
169
187
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_lsame.c
|
188
|
+
- ext/nmatrix_lapacke/lapacke/utils/lapacke_s_nancheck.c
|
170
189
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_sge_nancheck.c
|
171
190
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_sge_trans.c
|
172
191
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_spo_nancheck.c
|
@@ -174,6 +193,7 @@ files:
|
|
174
193
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_str_nancheck.c
|
175
194
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_str_trans.c
|
176
195
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_xerbla.c
|
196
|
+
- ext/nmatrix_lapacke/lapacke/utils/lapacke_z_nancheck.c
|
177
197
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_zge_nancheck.c
|
178
198
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_zge_trans.c
|
179
199
|
- ext/nmatrix_lapacke/lapacke/utils/lapacke_zpo_nancheck.c
|
@@ -219,7 +239,7 @@ files:
|
|
219
239
|
- spec/utm5940.mtx
|
220
240
|
homepage: http://sciruby.com
|
221
241
|
licenses:
|
222
|
-
- BSD
|
242
|
+
- BSD-3-Clause
|
223
243
|
metadata: {}
|
224
244
|
post_install_message:
|
225
245
|
rdoc_options: []
|
@@ -237,7 +257,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
237
257
|
version: '0'
|
238
258
|
requirements: []
|
239
259
|
rubyforge_project:
|
240
|
-
rubygems_version: 2.
|
260
|
+
rubygems_version: 2.5.1
|
241
261
|
signing_key:
|
242
262
|
specification_version: 4
|
243
263
|
summary: general LAPACK backend for nmatrix using LAPACKE interface
|
@@ -246,17 +266,27 @@ test_files:
|
|
246
266
|
- spec/01_enum_spec.rb
|
247
267
|
- spec/02_slice_spec.rb
|
248
268
|
- spec/03_nmatrix_monkeys_spec.rb
|
269
|
+
- spec/2x2_dense_double.mat
|
270
|
+
- spec/4x4_sparse.mat
|
271
|
+
- spec/4x5_dense.mat
|
249
272
|
- spec/blas_spec.rb
|
250
273
|
- spec/elementwise_spec.rb
|
251
274
|
- spec/homogeneous_spec.rb
|
252
275
|
- spec/io/fortran_format_spec.rb
|
253
276
|
- spec/io/harwell_boeing_spec.rb
|
277
|
+
- spec/io/test.rua
|
254
278
|
- spec/io_spec.rb
|
255
279
|
- spec/lapack_core_spec.rb
|
280
|
+
- spec/leakcheck.rb
|
256
281
|
- spec/math_spec.rb
|
282
|
+
- spec/nmatrix_yale_resize_test_associations.yaml
|
257
283
|
- spec/nmatrix_yale_spec.rb
|
284
|
+
- spec/rspec_monkeys.rb
|
258
285
|
- spec/rspec_spec.rb
|
259
286
|
- spec/shortcuts_spec.rb
|
260
287
|
- spec/slice_set_spec.rb
|
288
|
+
- spec/spec_helper.rb
|
261
289
|
- spec/stat_spec.rb
|
290
|
+
- spec/test.pcd
|
291
|
+
- spec/utm5940.mtx
|
262
292
|
- spec/plugins/lapacke/lapacke_spec.rb
|