RubyGems - nimbus - Versions diffs - 1.0.1 → 2.0.0 - Mend

nimbus 1.0.1 → 2.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (29) hide show

data/README.md +149 -0
data/lib/nimbus.rb +15 -11
data/lib/nimbus/application.rb +20 -23
data/lib/nimbus/classification_tree.rb +111 -0
data/lib/nimbus/configuration.rb +52 -37
data/lib/nimbus/forest.rb +56 -20
data/lib/nimbus/individual.rb +7 -7
data/lib/nimbus/loss_functions.rb +44 -10
data/lib/nimbus/regression_tree.rb +103 -0
data/lib/nimbus/training_set.rb +4 -4
data/lib/nimbus/tree.rb +20 -83
data/lib/nimbus/version.rb +3 -0
data/spec/classification_tree_spec.rb +132 -0
data/spec/configuration_spec.rb +46 -19
data/spec/fixtures/classification_config.yml +13 -0
data/spec/fixtures/classification_random_forest.yml +922 -0
data/spec/fixtures/classification_testing.data +500 -0
data/spec/fixtures/classification_training.data +1000 -0
data/spec/forest_spec.rb +109 -50
data/spec/individual_spec.rb +2 -2
data/spec/loss_functions_spec.rb +71 -0
data/spec/nimbus_spec.rb +4 -4
data/spec/regression_tree_spec.rb +129 -0
data/spec/training_set_spec.rb +5 -5
data/spec/tree_spec.rb +4 -115
metadata +53 -45
data/spec/fixtures/regression_snp_importances.txt +0 -200
data/spec/fixtures/regression_testing_file_predictions.txt +0 -200
data/spec/fixtures/regression_training_file_predictions.txt +0 -758

data/spec/fixtures/regression_training_file_predictions.txt DELETED Viewed

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