nimbus 0.10 → 1.0

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Files changed (20) hide show
  1. data/lib/nimbus/application.rb +2 -1
  2. data/lib/nimbus/configuration.rb +15 -6
  3. data/lib/nimbus/tree.rb +1 -1
  4. data/spec/configuration_spec.rb +92 -0
  5. data/spec/fixtures/regression_config.yml +12 -0
  6. data/spec/fixtures/regression_random_forest.yml +1741 -0
  7. data/spec/fixtures/regression_snp_importances.txt +200 -0
  8. data/spec/fixtures/{testing_regression.data → regression_testing.data} +0 -0
  9. data/spec/fixtures/regression_testing_file_predictions.txt +200 -0
  10. data/spec/fixtures/{training_regression.data → regression_training.data} +0 -0
  11. data/spec/fixtures/regression_training_file_predictions.txt +758 -0
  12. data/spec/forest_spec.rb +57 -0
  13. data/spec/individual_spec.rb +13 -0
  14. data/spec/nimbus_spec.rb +17 -1
  15. data/spec/spec_helper.rb +7 -1
  16. data/spec/training_set_spec.rb +25 -0
  17. data/spec/tree_spec.rb +130 -0
  18. metadata +27 -10
  19. data/README.rdoc +0 -1
  20. data/spec/fixtures/config.yml +0 -11
data/spec/fixtures/regression_snp_importances.txt ADDED
@@ -0,0 +1,200 @@
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11
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14
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+ SNP #17: 0.0001
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23
+ SNP #23: 0.0002
24
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data/spec/fixtures/regression_testing_file_predictions.txt ADDED
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