nifti 0.0.1
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- data/.gitignore +6 -0
- data/CHANGELOG +13 -0
- data/COPYING +674 -0
- data/Gemfile +4 -0
- data/Gemfile.lock +30 -0
- data/README.markdown +126 -0
- data/Rakefile +2 -0
- data/lib/nifti/constants.rb +223 -0
- data/lib/nifti/n_object.rb +155 -0
- data/lib/nifti/n_read.rb +264 -0
- data/lib/nifti/n_write.rb +142 -0
- data/lib/nifti/stream.rb +373 -0
- data/lib/nifti/version.rb +4 -0
- data/lib/nifti.rb +23 -0
- data/nifti.gemspec +24 -0
- data/spec/custom_matchers.rb +13 -0
- data/spec/fixtures/3plLoc.nii +0 -0
- data/spec/interactive/compare.rb +43 -0
- data/spec/nifti/n_object_spec.rb +111 -0
- data/spec/nifti/n_read_spec.rb +89 -0
- data/spec/nifti/n_write_spec.rb +56 -0
- data/spec/nifti/stream_spec.rb +44 -0
- data/spec/spec_helper.rb +13 -0
- metadata +138 -0
data/CHANGELOG
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= 0.0.1
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=== (In Development) February, 2011
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First release.
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The library offers bare-bones functionality and should be usable for people interested in working with NIfTI files in Ruby. The code is 98% documented according to rdoc and should hopefully be clear and straightforward to read, use and fork.
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Known issues:
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* Speed and Memory usage: This thing is really, really slow when packing and unpacking image data into arrays, and I've seen a single 40MB image explode into ~6GB of in-use memory.
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* Only tested with little-endian, signed short, 3d and 4d images.
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* No interfaces for viewing image data (qt, NImage, etc.). The easiest way right now is to save out the nifti and then use another image viewing program.
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* Only supports .nii (n+1) single image files, not a split .img/.hdr
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* Vox_offset is not being updated during writing, so this will cause a problem if image length or extended header length is updated.
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