newick-ruby 1.0.2 → 1.0.3

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Files changed (4) hide show
  1. data/README +1 -0
  2. data/bin/newickDraw +2 -1
  3. data/lib/Newick.rb +1 -1
  4. metadata +4 -4
data/README CHANGED
@@ -16,6 +16,7 @@ jhbadger@gmail.com
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  UPDATES:
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  1.0.2 -- faster distance matrix calculation
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+ 1.0.3 -- fixed colors in highlights when drawing trees
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  License
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  (The MIT License)
data/bin/newickDraw CHANGED
@@ -40,11 +40,12 @@ ARGV.options {|o|
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  highlights = Hash.new
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  if (opt.highlights)
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  opt.highlights.split(",").each {|highlight|
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- highlights[highlight] = [255, 0, 0]
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+ highlights[highlight] = "red"
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  }
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  elsif (opt.file)
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  File.new(opt.file).each {|line|
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  name, color = line.chomp.split(" ")
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+ color = "red" if color.nil?
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  highlights[name] = color
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  }
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  end
data/lib/Newick.rb CHANGED
@@ -735,7 +735,7 @@ class NewickTree
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  yUnit = 0.25
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  lineWidth = 0.01
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  elsif (taxa.size < 150)
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- fontSize = 8
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+ fontSize = 6
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  yUnit = 0.197
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  lineWidth = 0.01
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  elsif (taxa.size < 300)
metadata CHANGED
@@ -1,13 +1,13 @@
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  --- !ruby/object:Gem::Specification
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  name: newick-ruby
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  version: !ruby/object:Gem::Version
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- hash: 19
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+ hash: 17
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  prerelease: false
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  segments:
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  - 1
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  - 0
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- - 2
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- version: 1.0.2
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+ - 3
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+ version: 1.0.3
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  platform: ruby
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  authors:
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  - Jonathan Badger
@@ -15,7 +15,7 @@ autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2010-11-08 00:00:00 -08:00
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+ date: 2010-12-07 00:00:00 -08:00
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  default_executable:
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  dependencies:
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  - !ruby/object:Gem::Dependency