neptune 0.2.1 → 0.2.2
Sign up to get free protection for your applications and to get access to all the features.
- data/README +4 -0
- data/doc/BabelHelper.html +393 -376
- data/doc/BadConfigurationException.html +121 -127
- data/doc/CommonFunctions.html +237 -265
- data/doc/ExodusHelper.html +820 -0
- data/doc/ExodusTaskInfo.html +263 -0
- data/doc/FileNotFoundException.html +121 -127
- data/doc/NeptuneHelper.html +527 -592
- data/doc/NeptuneManagerClient.html +696 -0
- data/doc/NeptuneManagerException.html +139 -0
- data/doc/Object.html +334 -236
- data/doc/TaskInfo.html +428 -0
- data/doc/created.rid +8 -5
- data/doc/images/add.png +0 -0
- data/doc/images/delete.png +0 -0
- data/doc/images/tag_blue.png +0 -0
- data/doc/images/transparent.png +0 -0
- data/doc/index.html +74 -142
- data/doc/js/darkfish.js +99 -62
- data/doc/js/jquery.js +15 -29
- data/doc/js/navigation.js +142 -0
- data/doc/js/search.js +94 -0
- data/doc/js/search_index.js +1 -0
- data/doc/js/searcher.js +228 -0
- data/doc/table_of_contents.html +226 -0
- data/lib/babel.rb +116 -50
- data/lib/custom_exceptions.rb +2 -2
- data/lib/exodus.rb +311 -0
- data/lib/exodus_task_info.rb +36 -0
- data/lib/neptune.rb +52 -18
- data/lib/{app_controller_client.rb → neptune_manager_client.rb} +54 -38
- data/lib/task_info.rb +155 -0
- data/test/{unit/test_babel.rb → test_babel.rb} +161 -26
- data/test/{unit/test_common_functions.rb → test_common_functions.rb} +1 -1
- data/test/test_exodus.rb +687 -0
- data/test/{unit/test_neptune.rb → test_neptune.rb} +28 -17
- data/test/{unit/test_app_controller_client.rb → test_neptune_manager_client.rb} +15 -16
- data/test/test_task_info.rb +32 -0
- data/test/{unit/ts_all.rb → ts_all.rb} +3 -1
- metadata +30 -34
- data/doc/AppControllerClient.html +0 -702
- data/doc/AppControllerException.html +0 -145
- data/doc/bin/neptune.html +0 -56
- data/doc/js/quicksearch.js +0 -114
- data/doc/js/thickbox-compressed.js +0 -10
- data/doc/lib/app_controller_client_rb.html +0 -60
- data/doc/lib/babel_rb.html +0 -68
- data/doc/lib/common_functions_rb.html +0 -70
- data/doc/lib/custom_exceptions_rb.html +0 -54
- data/doc/lib/neptune_rb.html +0 -60
- data/test/integration/tc_c.rb +0 -57
- data/test/integration/tc_dfsp.rb +0 -37
- data/test/integration/tc_dwssa.rb +0 -38
- data/test/integration/tc_erlang.rb +0 -183
- data/test/integration/tc_mapreduce.rb +0 -282
- data/test/integration/tc_mpi.rb +0 -160
- data/test/integration/tc_storage.rb +0 -209
- data/test/integration/tc_upc.rb +0 -75
- data/test/integration/tc_x10.rb +0 -94
- data/test/integration/test_helper.rb +0 -135
- data/test/integration/ts_neptune.rb +0 -40
data/README
CHANGED
|
@@ -67,6 +67,10 @@ http://www.neptune-lang.org/2011/6/Neptune-Picks-up-Best-Paper-at-ScienceCloud-2
|
|
|
67
67
|
|
|
68
68
|
Version History:
|
|
69
69
|
|
|
70
|
+
July 30, 2012 - 0.2.2 released, adding batch support for babel calls, and first
|
|
71
|
+
pass on exodus(), which automatically finds the right cloud compute, storage, and
|
|
72
|
+
queue service to deploy your tasks to.
|
|
73
|
+
|
|
70
74
|
February 12, 2012 - 0.2.1 released, adding support for the babel() method on
|
|
71
75
|
non-Babel job types (e.g., MPI, MapReduce), and removed the is_remote
|
|
72
76
|
parameter for babel() calls (since it can always be inferred from :storage).
|
data/doc/BabelHelper.html
CHANGED
|
@@ -1,166 +1,201 @@
|
|
|
1
|
-
|
|
2
|
-
|
|
3
|
-
|
|
4
|
-
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
|
|
1
|
+
<!DOCTYPE html>
|
|
2
|
+
|
|
3
|
+
<html>
|
|
5
4
|
<head>
|
|
6
|
-
|
|
7
|
-
|
|
8
|
-
<title>Module: BabelHelper</title>
|
|
9
|
-
|
|
10
|
-
<link rel="stylesheet" href="./rdoc.css" type="text/css" media="screen" />
|
|
11
|
-
|
|
12
|
-
<script src="./js/jquery.js" type="text/javascript"
|
|
13
|
-
charset="utf-8"></script>
|
|
14
|
-
<script src="./js/thickbox-compressed.js" type="text/javascript"
|
|
15
|
-
charset="utf-8"></script>
|
|
16
|
-
<script src="./js/quicksearch.js" type="text/javascript"
|
|
17
|
-
charset="utf-8"></script>
|
|
18
|
-
<script src="./js/darkfish.js" type="text/javascript"
|
|
19
|
-
charset="utf-8"></script>
|
|
20
|
-
|
|
21
|
-
</head>
|
|
22
|
-
<body class="module">
|
|
23
|
-
|
|
24
|
-
<div id="metadata">
|
|
25
|
-
<div id="home-metadata">
|
|
26
|
-
<div id="home-section" class="section">
|
|
27
|
-
<h3 class="section-header">
|
|
28
|
-
<a href="./index.html">Home</a>
|
|
29
|
-
<a href="./index.html#classes">Classes</a>
|
|
30
|
-
<a href="./index.html#methods">Methods</a>
|
|
31
|
-
</h3>
|
|
32
|
-
</div>
|
|
33
|
-
</div>
|
|
34
|
-
|
|
35
|
-
<div id="file-metadata">
|
|
36
|
-
<div id="file-list-section" class="section">
|
|
37
|
-
<h3 class="section-header">In Files</h3>
|
|
38
|
-
<div class="section-body">
|
|
39
|
-
<ul>
|
|
40
|
-
|
|
41
|
-
<li><a href="./lib/babel_rb.html?TB_iframe=true&height=550&width=785"
|
|
42
|
-
class="thickbox" title="lib/babel.rb">lib/babel.rb</a></li>
|
|
43
|
-
|
|
44
|
-
</ul>
|
|
45
|
-
</div>
|
|
46
|
-
</div>
|
|
5
|
+
<meta content="text/html; charset=UTF-8" http-equiv="Content-Type">
|
|
47
6
|
|
|
48
|
-
|
|
49
|
-
</div>
|
|
7
|
+
<title>module BabelHelper - RDoc Documentation</title>
|
|
50
8
|
|
|
51
|
-
|
|
9
|
+
<link type="text/css" media="screen" href="./rdoc.css" rel="stylesheet">
|
|
52
10
|
|
|
53
|
-
|
|
54
|
-
|
|
11
|
+
<script type="text/javascript">
|
|
12
|
+
var rdoc_rel_prefix = "./";
|
|
13
|
+
</script>
|
|
55
14
|
|
|
56
|
-
|
|
57
|
-
|
|
15
|
+
<script type="text/javascript" charset="utf-8" src="./js/jquery.js"></script>
|
|
16
|
+
<script type="text/javascript" charset="utf-8" src="./js/navigation.js"></script>
|
|
17
|
+
<script type="text/javascript" charset="utf-8" src="./js/search_index.js"></script>
|
|
18
|
+
<script type="text/javascript" charset="utf-8" src="./js/search.js"></script>
|
|
19
|
+
<script type="text/javascript" charset="utf-8" src="./js/searcher.js"></script>
|
|
20
|
+
<script type="text/javascript" charset="utf-8" src="./js/darkfish.js"></script>
|
|
58
21
|
|
|
59
|
-
<!-- Method Quickref -->
|
|
60
|
-
|
|
61
|
-
<div id="method-list-section" class="section">
|
|
62
|
-
<h3 class="section-header">Methods</h3>
|
|
63
|
-
<ul class="link-list">
|
|
64
|
-
|
|
65
|
-
<li><a href="#method-c-convert_from_neptune_params">::convert_from_neptune_params</a></li>
|
|
66
|
-
|
|
67
|
-
<li><a href="#method-c-convert_to_neptune_params">::convert_to_neptune_params</a></li>
|
|
68
|
-
|
|
69
|
-
<li><a href="#method-c-ensure_output_does_not_exist">::ensure_output_does_not_exist</a></li>
|
|
70
|
-
|
|
71
|
-
<li><a href="#method-c-generate_output_location">::generate_output_location</a></li>
|
|
72
|
-
|
|
73
|
-
<li><a href="#method-c-get_appcontroller">::get_appcontroller</a></li>
|
|
74
|
-
|
|
75
|
-
<li><a href="#method-c-get_bucket_for_local_data">::get_bucket_for_local_data</a></li>
|
|
76
|
-
|
|
77
|
-
<li><a href="#method-c-put_code">::put_code</a></li>
|
|
78
|
-
|
|
79
|
-
<li><a href="#method-c-put_file">::put_file</a></li>
|
|
80
|
-
|
|
81
|
-
<li><a href="#method-c-put_inputs">::put_inputs</a></li>
|
|
82
|
-
|
|
83
|
-
<li><a href="#method-c-run_job">::run_job</a></li>
|
|
84
|
-
|
|
85
|
-
<li><a href="#method-c-validate_inputs">::validate_inputs</a></li>
|
|
86
|
-
|
|
87
|
-
<li><a href="#method-c-wait_and_get_output">::wait_and_get_output</a></li>
|
|
88
|
-
|
|
89
|
-
</ul>
|
|
90
|
-
</div>
|
|
91
|
-
|
|
92
22
|
|
|
93
|
-
|
|
94
|
-
|
|
95
|
-
|
|
23
|
+
<body id="top" class="module">
|
|
24
|
+
<nav id="metadata">
|
|
25
|
+
<nav id="home-section" class="section">
|
|
26
|
+
<h3 class="section-header">
|
|
27
|
+
<a href="./index.html">Home</a>
|
|
28
|
+
<a href="./table_of_contents.html#classes">Classes</a>
|
|
29
|
+
<a href="./table_of_contents.html#methods">Methods</a>
|
|
30
|
+
</h3>
|
|
31
|
+
</nav>
|
|
96
32
|
|
|
97
|
-
<div id="project-metadata">
|
|
98
|
-
|
|
99
|
-
|
|
100
33
|
|
|
101
|
-
|
|
102
|
-
|
|
103
|
-
|
|
104
|
-
|
|
105
|
-
|
|
106
|
-
|
|
107
|
-
|
|
108
|
-
<legend>Quicksearch</legend>
|
|
109
|
-
<input type="text" name="quicksearch" value=""
|
|
110
|
-
class="quicksearch-field" />
|
|
111
|
-
</fieldset>
|
|
112
|
-
</form>
|
|
34
|
+
<nav id="search-section" class="section project-section" class="initially-hidden">
|
|
35
|
+
<form action="#" method="get" accept-charset="utf-8">
|
|
36
|
+
<h3 class="section-header">
|
|
37
|
+
<input type="text" name="search" placeholder="Search" id="search-field"
|
|
38
|
+
title="Type to search, Up and Down to navigate, Enter to load">
|
|
39
|
+
</h3>
|
|
40
|
+
</form>
|
|
113
41
|
|
|
114
|
-
|
|
115
|
-
|
|
116
|
-
|
|
117
|
-
|
|
118
|
-
|
|
119
|
-
|
|
120
|
-
|
|
121
|
-
|
|
122
|
-
|
|
123
|
-
|
|
124
|
-
|
|
125
|
-
|
|
126
|
-
|
|
127
|
-
|
|
128
|
-
|
|
129
|
-
|
|
130
|
-
|
|
131
|
-
|
|
132
|
-
|
|
133
|
-
|
|
134
|
-
|
|
42
|
+
<ul id="search-results" class="initially-hidden"></ul>
|
|
43
|
+
</nav>
|
|
44
|
+
|
|
45
|
+
|
|
46
|
+
<div id="file-metadata">
|
|
47
|
+
<nav id="file-list-section" class="section">
|
|
48
|
+
<h3 class="section-header">Defined In</h3>
|
|
49
|
+
<ul>
|
|
50
|
+
<li>lib/babel.rb
|
|
51
|
+
</ul>
|
|
52
|
+
</nav>
|
|
53
|
+
|
|
54
|
+
|
|
55
|
+
</div>
|
|
56
|
+
|
|
57
|
+
<div id="class-metadata">
|
|
58
|
+
|
|
59
|
+
|
|
60
|
+
|
|
61
|
+
<!-- Method Quickref -->
|
|
62
|
+
<nav id="method-list-section" class="section">
|
|
63
|
+
<h3 class="section-header">Methods</h3>
|
|
64
|
+
|
|
65
|
+
<ul class="link-list">
|
|
66
|
+
|
|
67
|
+
<li><a href="#method-c-check_output_files">::check_output_files</a>
|
|
68
|
+
|
|
69
|
+
<li><a href="#method-c-convert_from_neptune_params">::convert_from_neptune_params</a>
|
|
70
|
+
|
|
71
|
+
<li><a href="#method-c-convert_to_neptune_params">::convert_to_neptune_params</a>
|
|
72
|
+
|
|
73
|
+
<li><a href="#method-c-ensure_output_does_not_exist">::ensure_output_does_not_exist</a>
|
|
74
|
+
|
|
75
|
+
<li><a href="#method-c-generate_output_location">::generate_output_location</a>
|
|
76
|
+
|
|
77
|
+
<li><a href="#method-c-get_bucket_for_local_data">::get_bucket_for_local_data</a>
|
|
78
|
+
|
|
79
|
+
<li><a href="#method-c-get_neptune_manager_client">::get_neptune_manager_client</a>
|
|
80
|
+
|
|
81
|
+
<li><a href="#method-c-put_code">::put_code</a>
|
|
82
|
+
|
|
83
|
+
<li><a href="#method-c-put_file">::put_file</a>
|
|
84
|
+
|
|
85
|
+
<li><a href="#method-c-put_inputs">::put_inputs</a>
|
|
86
|
+
|
|
87
|
+
<li><a href="#method-c-run_job">::run_job</a>
|
|
88
|
+
|
|
89
|
+
<li><a href="#method-c-validate_inputs">::validate_inputs</a>
|
|
90
|
+
|
|
91
|
+
<li><a href="#method-c-wait_and_get_output">::wait_and_get_output</a>
|
|
92
|
+
|
|
93
|
+
</ul>
|
|
94
|
+
</nav>
|
|
95
|
+
|
|
96
|
+
</div>
|
|
97
|
+
|
|
98
|
+
<div id="project-metadata">
|
|
99
|
+
|
|
100
|
+
<nav id="classindex-section" class="section project-section">
|
|
101
|
+
<h3 class="section-header">Class and Module Index</h3>
|
|
102
|
+
|
|
103
|
+
<ul class="link-list">
|
|
104
|
+
|
|
105
|
+
<li><a href="./BabelHelper.html">BabelHelper</a>
|
|
106
|
+
|
|
107
|
+
<li><a href="./BadConfigurationException.html">BadConfigurationException</a>
|
|
108
|
+
|
|
109
|
+
<li><a href="./CommonFunctions.html">CommonFunctions</a>
|
|
110
|
+
|
|
111
|
+
<li><a href="./ExodusHelper.html">ExodusHelper</a>
|
|
112
|
+
|
|
113
|
+
<li><a href="./ExodusTaskInfo.html">ExodusTaskInfo</a>
|
|
114
|
+
|
|
115
|
+
<li><a href="./FileNotFoundException.html">FileNotFoundException</a>
|
|
116
|
+
|
|
117
|
+
<li><a href="./NeptuneHelper.html">NeptuneHelper</a>
|
|
118
|
+
|
|
119
|
+
<li><a href="./NeptuneManagerClient.html">NeptuneManagerClient</a>
|
|
120
|
+
|
|
121
|
+
<li><a href="./NeptuneManagerException.html">NeptuneManagerException</a>
|
|
122
|
+
|
|
123
|
+
<li><a href="./Object.html">Object</a>
|
|
124
|
+
|
|
125
|
+
<li><a href="./TaskInfo.html">TaskInfo</a>
|
|
126
|
+
|
|
127
|
+
</ul>
|
|
128
|
+
</nav>
|
|
135
129
|
|
|
136
|
-
|
|
137
|
-
</div>
|
|
138
130
|
</div>
|
|
131
|
+
</nav>
|
|
139
132
|
|
|
140
|
-
|
|
141
|
-
|
|
133
|
+
<div id="documentation">
|
|
134
|
+
<h1 class="module">module BabelHelper</h1>
|
|
142
135
|
|
|
143
|
-
|
|
144
|
-
|
|
136
|
+
<div id="description" class="description">
|
|
137
|
+
|
|
145
138
|
<p>This module provides convenience functions for babel().</p>
|
|
146
139
|
|
|
147
|
-
|
|
140
|
+
</div><!-- description -->
|
|
141
|
+
|
|
142
|
+
|
|
143
|
+
|
|
144
|
+
|
|
145
|
+
<section id="5Buntitled-5D" class="documentation-section">
|
|
146
|
+
|
|
147
|
+
|
|
148
|
+
|
|
148
149
|
|
|
149
|
-
<!-- Constants -->
|
|
150
150
|
|
|
151
151
|
|
|
152
|
-
<!-- Attributes -->
|
|
153
152
|
|
|
154
153
|
|
|
155
154
|
<!-- Methods -->
|
|
156
155
|
|
|
157
|
-
|
|
156
|
+
<section id="public-class-5Buntitled-5D-method-details" class="method-section section">
|
|
158
157
|
<h3 class="section-header">Public Class Methods</h3>
|
|
159
158
|
|
|
160
159
|
|
|
161
|
-
<div id="
|
|
162
|
-
|
|
160
|
+
<div id="method-c-check_output_files" class="method-detail ">
|
|
161
|
+
|
|
162
|
+
<div class="method-heading">
|
|
163
|
+
<span class="method-name">check_output_files</span><span
|
|
164
|
+
class="method-args">(job_data)</span>
|
|
165
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
166
|
+
</div>
|
|
167
|
+
|
|
163
168
|
|
|
169
|
+
<div class="method-description">
|
|
170
|
+
|
|
171
|
+
<p>babel() callers do not have to specify a location where the standard output
|
|
172
|
+
and error the task produces should be placed. If they don’t, generate
|
|
173
|
+
locations for them and make sure they don’t exist beforehand.</p>
|
|
174
|
+
|
|
175
|
+
|
|
176
|
+
|
|
177
|
+
<div class="method-source-code" id="check_output_files-source">
|
|
178
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 145</span>
|
|
179
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">check_output_files</span>(<span class="ruby-identifier">job_data</span>)
|
|
180
|
+
[<span class="ruby-string">"@output"</span>, <span class="ruby-string">"@error"</span>, <span class="ruby-string">"@metadata"</span>].<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">item</span><span class="ruby-operator">|</span>
|
|
181
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-identifier">item</span>].<span class="ruby-identifier">nil?</span> <span class="ruby-keyword">or</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-identifier">item</span>].<span class="ruby-identifier">empty?</span>
|
|
182
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-identifier">item</span>] = <span class="ruby-constant">BabelHelper</span>.<span class="ruby-identifier">generate_output_location</span>(<span class="ruby-identifier">job_data</span>)
|
|
183
|
+
<span class="ruby-keyword">else</span>
|
|
184
|
+
<span class="ruby-constant">BabelHelper</span>.<span class="ruby-identifier">ensure_output_does_not_exist</span>(<span class="ruby-identifier">job_data</span>, <span class="ruby-identifier">job_data</span>[<span class="ruby-identifier">item</span>])
|
|
185
|
+
<span class="ruby-keyword">end</span>
|
|
186
|
+
}
|
|
187
|
+
<span class="ruby-keyword">end</span></pre>
|
|
188
|
+
</div><!-- check_output_files-source -->
|
|
189
|
+
|
|
190
|
+
</div>
|
|
191
|
+
|
|
192
|
+
|
|
193
|
+
|
|
194
|
+
|
|
195
|
+
</div><!-- check_output_files-method -->
|
|
196
|
+
|
|
197
|
+
|
|
198
|
+
<div id="method-c-convert_from_neptune_params" class="method-detail ">
|
|
164
199
|
|
|
165
200
|
<div class="method-heading">
|
|
166
201
|
<span class="method-name">convert_from_neptune_params</span><span
|
|
@@ -178,31 +213,27 @@ just re-converts it - how can we remove it?</p>
|
|
|
178
213
|
|
|
179
214
|
|
|
180
215
|
|
|
181
|
-
<div class="method-source-code"
|
|
182
|
-
|
|
183
|
-
<
|
|
184
|
-
<span class="ruby-
|
|
185
|
-
|
|
186
|
-
|
|
187
|
-
|
|
188
|
-
key = "@#{k}"
|
|
189
|
-
job_data[key] = v
|
|
216
|
+
<div class="method-source-code" id="convert_from_neptune_params-source">
|
|
217
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 256</span>
|
|
218
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">convert_from_neptune_params</span>(<span class="ruby-identifier">params</span>)
|
|
219
|
+
<span class="ruby-identifier">job_data</span> = {}
|
|
220
|
+
<span class="ruby-identifier">params</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">v</span><span class="ruby-operator">|</span>
|
|
221
|
+
<span class="ruby-identifier">key</span> = <span class="ruby-node">"@#{k}"</span>
|
|
222
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-identifier">key</span>] = <span class="ruby-identifier">v</span>
|
|
190
223
|
}
|
|
191
|
-
return job_data
|
|
192
|
-
end</pre>
|
|
193
|
-
</div
|
|
224
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">job_data</span>
|
|
225
|
+
<span class="ruby-keyword">end</span></pre>
|
|
226
|
+
</div><!-- convert_from_neptune_params-source -->
|
|
194
227
|
|
|
195
228
|
</div>
|
|
196
229
|
|
|
197
230
|
|
|
198
231
|
|
|
199
232
|
|
|
200
|
-
</div
|
|
233
|
+
</div><!-- convert_from_neptune_params-method -->
|
|
201
234
|
|
|
202
235
|
|
|
203
|
-
<div id="convert_to_neptune_params
|
|
204
|
-
<a name="method-c-convert_to_neptune_params"></a>
|
|
205
|
-
|
|
236
|
+
<div id="method-c-convert_to_neptune_params" class="method-detail ">
|
|
206
237
|
|
|
207
238
|
<div class="method-heading">
|
|
208
239
|
<span class="method-name">convert_to_neptune_params</span><span
|
|
@@ -218,37 +249,33 @@ converted them to the form @name, this function reverses that conversion.</p>
|
|
|
218
249
|
|
|
219
250
|
|
|
220
251
|
|
|
221
|
-
<div class="method-source-code"
|
|
222
|
-
|
|
223
|
-
<
|
|
224
|
-
<span class="ruby-
|
|
225
|
-
def self.convert_to_neptune_params(job_data)
|
|
226
|
-
neptune_params = {}
|
|
252
|
+
<div class="method-source-code" id="convert_to_neptune_params-source">
|
|
253
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 268</span>
|
|
254
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">convert_to_neptune_params</span>(<span class="ruby-identifier">job_data</span>)
|
|
255
|
+
<span class="ruby-identifier">neptune_params</span> = {}
|
|
227
256
|
|
|
228
|
-
job_data
|
|
229
|
-
key = k
|
|
230
|
-
neptune_params[key] = v
|
|
257
|
+
<span class="ruby-identifier">job_data</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">v</span><span class="ruby-operator">|</span>
|
|
258
|
+
<span class="ruby-identifier">key</span> = <span class="ruby-identifier">k</span>.<span class="ruby-identifier">delete</span>(<span class="ruby-string">"@"</span>).<span class="ruby-identifier">to_sym</span>
|
|
259
|
+
<span class="ruby-identifier">neptune_params</span>[<span class="ruby-identifier">key</span>] = <span class="ruby-identifier">v</span>
|
|
231
260
|
}
|
|
232
261
|
|
|
233
|
-
return neptune_params
|
|
234
|
-
end</pre>
|
|
235
|
-
</div
|
|
262
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">neptune_params</span>
|
|
263
|
+
<span class="ruby-keyword">end</span></pre>
|
|
264
|
+
</div><!-- convert_to_neptune_params-source -->
|
|
236
265
|
|
|
237
266
|
</div>
|
|
238
267
|
|
|
239
268
|
|
|
240
269
|
|
|
241
270
|
|
|
242
|
-
</div
|
|
271
|
+
</div><!-- convert_to_neptune_params-method -->
|
|
243
272
|
|
|
244
273
|
|
|
245
|
-
<div id="ensure_output_does_not_exist
|
|
246
|
-
<a name="method-c-ensure_output_does_not_exist"></a>
|
|
247
|
-
|
|
274
|
+
<div id="method-c-ensure_output_does_not_exist" class="method-detail ">
|
|
248
275
|
|
|
249
276
|
<div class="method-heading">
|
|
250
277
|
<span class="method-name">ensure_output_does_not_exist</span><span
|
|
251
|
-
class="method-args">(job_data)</span>
|
|
278
|
+
class="method-args">(job_data, remote_file)</span>
|
|
252
279
|
<span class="method-click-advice">click to toggle source</span>
|
|
253
280
|
</div>
|
|
254
281
|
|
|
@@ -261,29 +288,23 @@ with the given name.</p>
|
|
|
261
288
|
|
|
262
289
|
|
|
263
290
|
|
|
264
|
-
<div class="method-source-code"
|
|
265
|
-
|
|
266
|
-
<
|
|
267
|
-
<span class="ruby-
|
|
268
|
-
|
|
269
|
-
|
|
270
|
-
|
|
271
|
-
<span class="ruby-comment"># Kernel.puts job_data.inspect</span>
|
|
272
|
-
<span class="ruby-constant">NeptuneHelper</span>.require_file_to_not_exist(file, job_data, controller)
|
|
273
|
-
end</pre>
|
|
274
|
-
</div>
|
|
291
|
+
<div class="method-source-code" id="ensure_output_does_not_exist-source">
|
|
292
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 181</span>
|
|
293
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">ensure_output_does_not_exist</span>(<span class="ruby-identifier">job_data</span>, <span class="ruby-identifier">remote_file</span>)
|
|
294
|
+
<span class="ruby-identifier">controller</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_neptune_manager_client</span>(<span class="ruby-identifier">job_data</span>)
|
|
295
|
+
<span class="ruby-constant">NeptuneHelper</span>.<span class="ruby-identifier">require_file_to_not_exist</span>(<span class="ruby-identifier">remote_file</span>, <span class="ruby-identifier">job_data</span>, <span class="ruby-identifier">controller</span>)
|
|
296
|
+
<span class="ruby-keyword">end</span></pre>
|
|
297
|
+
</div><!-- ensure_output_does_not_exist-source -->
|
|
275
298
|
|
|
276
299
|
</div>
|
|
277
300
|
|
|
278
301
|
|
|
279
302
|
|
|
280
303
|
|
|
281
|
-
</div
|
|
304
|
+
</div><!-- ensure_output_does_not_exist-method -->
|
|
282
305
|
|
|
283
306
|
|
|
284
|
-
<div id="generate_output_location
|
|
285
|
-
<a name="method-c-generate_output_location"></a>
|
|
286
|
-
|
|
307
|
+
<div id="method-c-generate_output_location" class="method-detail ">
|
|
287
308
|
|
|
288
309
|
<div class="method-heading">
|
|
289
310
|
<span class="method-name">generate_output_location</span><span
|
|
@@ -301,37 +322,33 @@ code).</p>
|
|
|
301
322
|
|
|
302
323
|
|
|
303
324
|
|
|
304
|
-
<div class="method-source-code"
|
|
305
|
-
|
|
306
|
-
<
|
|
307
|
-
<span class="ruby-
|
|
308
|
-
def self.generate_output_location(job_data)
|
|
309
|
-
if job_data[<span class="ruby-string">"@storage"</span>]
|
|
325
|
+
<div class="method-source-code" id="generate_output_location-source">
|
|
326
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 109</span>
|
|
327
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">generate_output_location</span>(<span class="ruby-identifier">job_data</span>)
|
|
328
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@is_remote"</span>]
|
|
310
329
|
<span class="ruby-comment"># We already know the bucket name - the same one that the user</span>
|
|
311
330
|
<span class="ruby-comment"># has told us their code is located in.</span>
|
|
312
|
-
prefix = job_data[<span class="ruby-string">"@code"</span>]
|
|
313
|
-
else
|
|
314
|
-
prefix = self
|
|
315
|
-
end
|
|
331
|
+
<span class="ruby-identifier">prefix</span> = <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@code"</span>].<span class="ruby-identifier">scan</span>(<span class="ruby-regexp">%r\/(.*?)\//</span>)[<span class="ruby-value">0</span>].<span class="ruby-identifier">to_s</span>
|
|
332
|
+
<span class="ruby-keyword">else</span>
|
|
333
|
+
<span class="ruby-identifier">prefix</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_bucket_for_local_data</span>(<span class="ruby-identifier">job_data</span>)
|
|
334
|
+
<span class="ruby-keyword">end</span>
|
|
316
335
|
|
|
317
|
-
return
|
|
318
|
-
end</pre>
|
|
319
|
-
</div
|
|
336
|
+
<span class="ruby-keyword">return</span> <span class="ruby-node">"/#{prefix}/babel/temp-#{CommonFunctions.get_random_alphanumeric()}"</span>
|
|
337
|
+
<span class="ruby-keyword">end</span></pre>
|
|
338
|
+
</div><!-- generate_output_location-source -->
|
|
320
339
|
|
|
321
340
|
</div>
|
|
322
341
|
|
|
323
342
|
|
|
324
343
|
|
|
325
344
|
|
|
326
|
-
</div
|
|
345
|
+
</div><!-- generate_output_location-method -->
|
|
327
346
|
|
|
328
347
|
|
|
329
|
-
<div id="
|
|
330
|
-
<a name="method-c-get_appcontroller"></a>
|
|
331
|
-
|
|
348
|
+
<div id="method-c-get_bucket_for_local_data" class="method-detail ">
|
|
332
349
|
|
|
333
350
|
<div class="method-heading">
|
|
334
|
-
<span class="method-name">
|
|
351
|
+
<span class="method-name">get_bucket_for_local_data</span><span
|
|
335
352
|
class="method-args">(job_data)</span>
|
|
336
353
|
<span class="method-click-advice">click to toggle source</span>
|
|
337
354
|
</div>
|
|
@@ -339,37 +356,43 @@ end</pre>
|
|
|
339
356
|
|
|
340
357
|
<div class="method-description">
|
|
341
358
|
|
|
342
|
-
<p>
|
|
343
|
-
the
|
|
359
|
+
<p>Provides a common way for callers to get the name of the bucket that should
|
|
360
|
+
be used for Neptune jobs where the code is stored locally.</p>
|
|
344
361
|
|
|
345
362
|
|
|
346
363
|
|
|
347
|
-
<div class="method-source-code"
|
|
348
|
-
|
|
349
|
-
<
|
|
350
|
-
<span class="ruby-
|
|
351
|
-
|
|
352
|
-
|
|
353
|
-
|
|
354
|
-
|
|
355
|
-
|
|
356
|
-
end</
|
|
357
|
-
|
|
364
|
+
<div class="method-source-code" id="get_bucket_for_local_data-source">
|
|
365
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 124</span>
|
|
366
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_bucket_for_local_data</span>(<span class="ruby-identifier">job_data</span>)
|
|
367
|
+
<span class="ruby-identifier">bucket_name</span> = <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@bucket_name"</span>] <span class="ruby-operator">||</span> <span class="ruby-constant">ENV</span>[<span class="ruby-string">'BABEL_BUCKET_NAME'</span>] <span class="ruby-operator">||</span>
|
|
368
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@S3_bucket_name"</span>] <span class="ruby-operator">||</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@Walrus_bucket_name"</span>] <span class="ruby-operator">||</span>
|
|
369
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@GStorage_bucket_name"</span>] <span class="ruby-operator">||</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@WAZ_Container_Name"</span>]
|
|
370
|
+
|
|
371
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">bucket_name</span>.<span class="ruby-identifier">nil?</span>
|
|
372
|
+
<span class="ruby-identifier">raise</span> <span class="ruby-constant">BadConfigurationException</span>.<span class="ruby-identifier">new</span>(<span class="ruby-constant">NEEDS_BUCKET_INFO</span>)
|
|
373
|
+
<span class="ruby-keyword">end</span>
|
|
374
|
+
|
|
375
|
+
<span class="ruby-comment"># If the bucket name starts with a slash, remove it</span>
|
|
376
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">bucket_name</span>[<span class="ruby-value">0</span>].<span class="ruby-identifier">chr</span> <span class="ruby-operator">==</span> <span class="ruby-string">"/"</span>
|
|
377
|
+
<span class="ruby-identifier">bucket_name</span> = <span class="ruby-identifier">bucket_name</span>[<span class="ruby-value">1</span>, <span class="ruby-identifier">bucket_name</span>.<span class="ruby-identifier">length</span>]
|
|
378
|
+
<span class="ruby-keyword">end</span>
|
|
379
|
+
|
|
380
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">bucket_name</span>
|
|
381
|
+
<span class="ruby-keyword">end</span></pre>
|
|
382
|
+
</div><!-- get_bucket_for_local_data-source -->
|
|
358
383
|
|
|
359
384
|
</div>
|
|
360
385
|
|
|
361
386
|
|
|
362
387
|
|
|
363
388
|
|
|
364
|
-
</div
|
|
389
|
+
</div><!-- get_bucket_for_local_data-method -->
|
|
365
390
|
|
|
366
391
|
|
|
367
|
-
<div id="
|
|
368
|
-
<a name="method-c-get_bucket_for_local_data"></a>
|
|
369
|
-
|
|
392
|
+
<div id="method-c-get_neptune_manager_client" class="method-detail ">
|
|
370
393
|
|
|
371
394
|
<div class="method-heading">
|
|
372
|
-
<span class="method-name">
|
|
395
|
+
<span class="method-name">get_neptune_manager_client</span><span
|
|
373
396
|
class="method-args">(job_data)</span>
|
|
374
397
|
<span class="method-click-advice">click to toggle source</span>
|
|
375
398
|
</div>
|
|
@@ -377,42 +400,30 @@ end</pre>
|
|
|
377
400
|
|
|
378
401
|
<div class="method-description">
|
|
379
402
|
|
|
380
|
-
<p>
|
|
381
|
-
|
|
403
|
+
<p>Returns an <a href="NeptuneManagerClient.html">NeptuneManagerClient</a> for
|
|
404
|
+
the given job data.</p>
|
|
382
405
|
|
|
383
406
|
|
|
384
407
|
|
|
385
|
-
<div class="method-source-code"
|
|
386
|
-
|
|
387
|
-
<
|
|
388
|
-
<span class="ruby-
|
|
389
|
-
|
|
390
|
-
|
|
391
|
-
|
|
392
|
-
|
|
393
|
-
|
|
394
|
-
end
|
|
395
|
-
|
|
396
|
-
<span class="ruby-comment"># If the bucket name starts with a slash, remove it</span>
|
|
397
|
-
if bucket_name[0].chr == <span class="ruby-string">"/"</span>
|
|
398
|
-
bucket_name = bucket_name[1, bucket_name.length]
|
|
399
|
-
end
|
|
400
|
-
|
|
401
|
-
return bucket_name
|
|
402
|
-
end</pre>
|
|
403
|
-
</div>
|
|
408
|
+
<div class="method-source-code" id="get_neptune_manager_client-source">
|
|
409
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 188</span>
|
|
410
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_neptune_manager_client</span>(<span class="ruby-identifier">job_data</span>)
|
|
411
|
+
<span class="ruby-identifier">keyname</span> = <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@keyname"</span>] <span class="ruby-operator">||</span> <span class="ruby-string">"appscale"</span>
|
|
412
|
+
<span class="ruby-identifier">shadow_ip</span> = <span class="ruby-constant">CommonFunctions</span>.<span class="ruby-identifier">get_from_yaml</span>(<span class="ruby-identifier">keyname</span>, <span class="ruby-value">:shadow</span>)
|
|
413
|
+
<span class="ruby-identifier">secret</span> = <span class="ruby-constant">CommonFunctions</span>.<span class="ruby-identifier">get_secret_key</span>(<span class="ruby-identifier">keyname</span>)
|
|
414
|
+
<span class="ruby-keyword">return</span> <span class="ruby-constant">NeptuneManagerClient</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">shadow_ip</span>, <span class="ruby-identifier">secret</span>)
|
|
415
|
+
<span class="ruby-keyword">end</span></pre>
|
|
416
|
+
</div><!-- get_neptune_manager_client-source -->
|
|
404
417
|
|
|
405
418
|
</div>
|
|
406
419
|
|
|
407
420
|
|
|
408
421
|
|
|
409
422
|
|
|
410
|
-
</div
|
|
423
|
+
</div><!-- get_neptune_manager_client-method -->
|
|
411
424
|
|
|
412
425
|
|
|
413
|
-
<div id="put_code
|
|
414
|
-
<a name="method-c-put_code"></a>
|
|
415
|
-
|
|
426
|
+
<div id="method-c-put_code" class="method-detail ">
|
|
416
427
|
|
|
417
428
|
<div class="method-heading">
|
|
418
429
|
<span class="method-name">put_code</span><span
|
|
@@ -429,30 +440,26 @@ used) in the remote datastore.</p>
|
|
|
429
440
|
|
|
430
441
|
|
|
431
442
|
|
|
432
|
-
<div class="method-source-code"
|
|
433
|
-
|
|
434
|
-
<
|
|
435
|
-
<span class="ruby-
|
|
436
|
-
|
|
437
|
-
|
|
438
|
-
|
|
439
|
-
|
|
440
|
-
|
|
441
|
-
|
|
442
|
-
end</pre>
|
|
443
|
-
</div>
|
|
443
|
+
<div class="method-source-code" id="put_code-source">
|
|
444
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 199</span>
|
|
445
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">put_code</span>(<span class="ruby-identifier">job_data</span>)
|
|
446
|
+
<span class="ruby-identifier">code_dir</span> = <span class="ruby-constant">File</span>.<span class="ruby-identifier">dirname</span>(<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@code"</span>])
|
|
447
|
+
<span class="ruby-identifier">code</span> = <span class="ruby-constant">File</span>.<span class="ruby-identifier">basename</span>(<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@code"</span>])
|
|
448
|
+
<span class="ruby-identifier">remote_code_dir</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">put_file</span>(<span class="ruby-identifier">code_dir</span>, <span class="ruby-identifier">job_data</span>)
|
|
449
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@code"</span>] = <span class="ruby-identifier">remote_code_dir</span> <span class="ruby-operator">+</span> <span class="ruby-string">"/"</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">code</span>
|
|
450
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@code"</span>]
|
|
451
|
+
<span class="ruby-keyword">end</span></pre>
|
|
452
|
+
</div><!-- put_code-source -->
|
|
444
453
|
|
|
445
454
|
</div>
|
|
446
455
|
|
|
447
456
|
|
|
448
457
|
|
|
449
458
|
|
|
450
|
-
</div
|
|
459
|
+
</div><!-- put_code-method -->
|
|
451
460
|
|
|
452
461
|
|
|
453
|
-
<div id="put_file
|
|
454
|
-
<a name="method-c-put_file"></a>
|
|
455
|
-
|
|
462
|
+
<div id="method-c-put_file" class="method-detail ">
|
|
456
463
|
|
|
457
464
|
<div class="method-heading">
|
|
458
465
|
<span class="method-name">put_file</span><span
|
|
@@ -468,35 +475,39 @@ Neptune ‘input’ job to store the data remotely.</p>
|
|
|
468
475
|
|
|
469
476
|
|
|
470
477
|
|
|
471
|
-
<div class="method-source-code"
|
|
472
|
-
|
|
473
|
-
<
|
|
474
|
-
<span class="ruby-
|
|
475
|
-
|
|
476
|
-
input_data =
|
|
477
|
-
input_data[:type] = <span class="ruby-string">"input"</span>
|
|
478
|
-
input_data[:local] = local_path
|
|
478
|
+
<div class="method-source-code" id="put_file-source">
|
|
479
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 230</span>
|
|
480
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">put_file</span>(<span class="ruby-identifier">local_path</span>, <span class="ruby-identifier">job_data</span>)
|
|
481
|
+
<span class="ruby-identifier">input_data</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">convert_to_neptune_params</span>(<span class="ruby-identifier">job_data</span>)
|
|
482
|
+
<span class="ruby-identifier">input_data</span>[<span class="ruby-value">:type</span>] = <span class="ruby-string">"input"</span>
|
|
483
|
+
<span class="ruby-identifier">input_data</span>[<span class="ruby-value">:local</span>] = <span class="ruby-identifier">local_path</span>
|
|
479
484
|
|
|
480
|
-
bucket_name = self
|
|
481
|
-
input_data[
|
|
485
|
+
<span class="ruby-identifier">bucket_name</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_bucket_for_local_data</span>(<span class="ruby-identifier">job_data</span>)
|
|
486
|
+
<span class="ruby-identifier">input_data</span>[<span class="ruby-value">:remote</span>] = <span class="ruby-node">"/#{bucket_name}/babel#{local_path}"</span>
|
|
487
|
+
|
|
488
|
+
<span class="ruby-identifier">start</span> = <span class="ruby-constant">Time</span>.<span class="ruby-identifier">now</span>
|
|
489
|
+
<span class="ruby-constant">Kernel</span>.<span class="ruby-identifier">neptune</span>(<span class="ruby-identifier">input_data</span>)
|
|
490
|
+
<span class="ruby-identifier">fin</span> = <span class="ruby-constant">Time</span>.<span class="ruby-identifier">now</span>
|
|
491
|
+
|
|
492
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">'@metadata_info'</span>].<span class="ruby-identifier">nil?</span>
|
|
493
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">'@metadata_info'</span>] = {<span class="ruby-string">'time_to_store_inputs'</span> =<span class="ruby-operator">></span> <span class="ruby-value">0.0</span>}
|
|
494
|
+
<span class="ruby-keyword">end</span>
|
|
482
495
|
|
|
483
|
-
<span class="ruby-
|
|
496
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">'@metadata_info'</span>][<span class="ruby-string">'time_to_store_inputs'</span>] <span class="ruby-operator">+=</span> <span class="ruby-identifier">fin</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">start</span>
|
|
484
497
|
|
|
485
|
-
return input_data[
|
|
486
|
-
end</pre>
|
|
487
|
-
</div
|
|
498
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">input_data</span>[<span class="ruby-value">:remote</span>]
|
|
499
|
+
<span class="ruby-keyword">end</span></pre>
|
|
500
|
+
</div><!-- put_file-source -->
|
|
488
501
|
|
|
489
502
|
</div>
|
|
490
503
|
|
|
491
504
|
|
|
492
505
|
|
|
493
506
|
|
|
494
|
-
</div
|
|
507
|
+
</div><!-- put_file-method -->
|
|
495
508
|
|
|
496
509
|
|
|
497
|
-
<div id="put_inputs
|
|
498
|
-
<a name="method-c-put_inputs"></a>
|
|
499
|
-
|
|
510
|
+
<div id="method-c-put_inputs" class="method-detail ">
|
|
500
511
|
|
|
501
512
|
<div class="method-heading">
|
|
502
513
|
<span class="method-name">put_inputs</span><span
|
|
@@ -514,41 +525,37 @@ remote location of these files.</p>
|
|
|
514
525
|
|
|
515
526
|
|
|
516
527
|
|
|
517
|
-
<div class="method-source-code"
|
|
518
|
-
|
|
519
|
-
<
|
|
520
|
-
<span class="ruby-
|
|
521
|
-
|
|
522
|
-
|
|
523
|
-
return job_data
|
|
524
|
-
end
|
|
528
|
+
<div class="method-source-code" id="put_inputs-source">
|
|
529
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 212</span>
|
|
530
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">put_inputs</span>(<span class="ruby-identifier">job_data</span>)
|
|
531
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>].<span class="ruby-identifier">nil?</span> <span class="ruby-keyword">or</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>].<span class="ruby-identifier">empty?</span>
|
|
532
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">job_data</span>
|
|
533
|
+
<span class="ruby-keyword">end</span>
|
|
525
534
|
|
|
526
|
-
job_data[<span class="ruby-string">"@argv"</span>]
|
|
527
|
-
arg = job_data[<span class="ruby-string">"@argv"</span>][i]
|
|
528
|
-
if arg[0]
|
|
529
|
-
job_data[<span class="ruby-string">"@argv"</span>][i] = self
|
|
530
|
-
end
|
|
535
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>].<span class="ruby-identifier">each_index</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">i</span><span class="ruby-operator">|</span>
|
|
536
|
+
<span class="ruby-identifier">arg</span> = <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>][<span class="ruby-identifier">i</span>]
|
|
537
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">arg</span>[<span class="ruby-value">0</span>].<span class="ruby-identifier">chr</span> <span class="ruby-operator">==</span> <span class="ruby-string">"/"</span>
|
|
538
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>][<span class="ruby-identifier">i</span>] = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">put_file</span>(<span class="ruby-identifier">arg</span>, <span class="ruby-identifier">job_data</span>)
|
|
539
|
+
<span class="ruby-keyword">end</span>
|
|
531
540
|
}
|
|
532
541
|
|
|
533
|
-
return job_data
|
|
534
|
-
end</pre>
|
|
535
|
-
</div
|
|
542
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">job_data</span>
|
|
543
|
+
<span class="ruby-keyword">end</span></pre>
|
|
544
|
+
</div><!-- put_inputs-source -->
|
|
536
545
|
|
|
537
546
|
</div>
|
|
538
547
|
|
|
539
548
|
|
|
540
549
|
|
|
541
550
|
|
|
542
|
-
</div
|
|
551
|
+
</div><!-- put_inputs-method -->
|
|
543
552
|
|
|
544
553
|
|
|
545
|
-
<div id="run_job
|
|
546
|
-
<a name="method-c-run_job"></a>
|
|
547
|
-
|
|
554
|
+
<div id="method-c-run_job" class="method-detail ">
|
|
548
555
|
|
|
549
556
|
<div class="method-heading">
|
|
550
557
|
<span class="method-name">run_job</span><span
|
|
551
|
-
class="method-args">(
|
|
558
|
+
class="method-args">(job_data_list)</span>
|
|
552
559
|
<span class="method-click-advice">click to toggle source</span>
|
|
553
560
|
</div>
|
|
554
561
|
|
|
@@ -560,40 +567,56 @@ queue) from the given parameters.</p>
|
|
|
560
567
|
|
|
561
568
|
|
|
562
569
|
|
|
563
|
-
<div class="method-source-code"
|
|
564
|
-
|
|
565
|
-
<
|
|
566
|
-
<span class="ruby-
|
|
567
|
-
|
|
568
|
-
|
|
570
|
+
<div class="method-source-code" id="run_job-source">
|
|
571
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 282</span>
|
|
572
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">run_job</span>(<span class="ruby-identifier">job_data_list</span>)
|
|
573
|
+
<span class="ruby-identifier">run_data_list</span> = []
|
|
574
|
+
|
|
575
|
+
<span class="ruby-identifier">job_data_list</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">job_data</span><span class="ruby-operator">|</span>
|
|
576
|
+
<span class="ruby-identifier">run_data</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">convert_to_neptune_params</span>(<span class="ruby-identifier">job_data</span>)
|
|
569
577
|
|
|
570
|
-
|
|
571
|
-
|
|
572
|
-
|
|
573
|
-
|
|
578
|
+
<span class="ruby-comment"># Default to babel as the job type, if the user doesn't specify one.</span>
|
|
579
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">run_data</span>[<span class="ruby-value">:type</span>].<span class="ruby-identifier">nil?</span> <span class="ruby-keyword">or</span> <span class="ruby-identifier">run_data</span>[<span class="ruby-value">:type</span>].<span class="ruby-identifier">empty?</span>
|
|
580
|
+
<span class="ruby-identifier">run_data</span>[<span class="ruby-value">:type</span>] = <span class="ruby-string">"babel"</span>
|
|
581
|
+
<span class="ruby-keyword">end</span>
|
|
574
582
|
|
|
575
|
-
|
|
576
|
-
|
|
577
|
-
|
|
578
|
-
|
|
579
|
-
|
|
580
|
-
|
|
583
|
+
<span class="ruby-comment"># TODO(cgb): Once AppScale+Babel gets support for RabbitMQ, change this to</span>
|
|
584
|
+
<span class="ruby-comment"># exec tasks over it, instead of locally.</span>
|
|
585
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@run_local"</span>].<span class="ruby-identifier">nil?</span>
|
|
586
|
+
<span class="ruby-identifier">run_data</span>[<span class="ruby-value">:run_local</span>] = <span class="ruby-keyword">true</span>
|
|
587
|
+
<span class="ruby-identifier">run_data</span>[<span class="ruby-value">:engine</span>] = <span class="ruby-string">"executor-sqs"</span>
|
|
588
|
+
<span class="ruby-keyword">end</span>
|
|
581
589
|
|
|
582
|
-
|
|
583
|
-
|
|
584
|
-
|
|
590
|
+
<span class="ruby-identifier">run_data</span>[<span class="ruby-value">:failed_attempts</span>] = <span class="ruby-value">0</span>
|
|
591
|
+
<span class="ruby-identifier">run_data_list</span> <span class="ruby-operator"><<</span> <span class="ruby-identifier">run_data</span>
|
|
592
|
+
}
|
|
593
|
+
|
|
594
|
+
<span class="ruby-identifier">loop</span> {
|
|
595
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">run_data_list</span>.<span class="ruby-identifier">length</span> <span class="ruby-operator">==</span> <span class="ruby-value">1</span>
|
|
596
|
+
<span class="ruby-identifier">run_job</span> = <span class="ruby-constant">Kernel</span>.<span class="ruby-identifier">neptune</span>(<span class="ruby-identifier">run_data_list</span>[<span class="ruby-value">0</span>])
|
|
597
|
+
<span class="ruby-keyword">else</span>
|
|
598
|
+
<span class="ruby-identifier">run_job</span> = <span class="ruby-constant">Kernel</span>.<span class="ruby-identifier">neptune</span>(<span class="ruby-identifier">run_data_list</span>)
|
|
599
|
+
<span class="ruby-keyword">end</span>
|
|
600
|
+
|
|
601
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">run_job</span>[<span class="ruby-value">:result</span>] <span class="ruby-operator">==</span> <span class="ruby-value">:success</span>
|
|
602
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">run_job</span>
|
|
603
|
+
<span class="ruby-keyword">else</span>
|
|
604
|
+
<span class="ruby-identifier">run_data_list</span>[<span class="ruby-value">0</span>][<span class="ruby-value">:failed_attempts</span>] <span class="ruby-operator">+=</span> <span class="ruby-value">1</span>
|
|
605
|
+
<span class="ruby-constant">Kernel</span>.<span class="ruby-identifier">sleep</span>(<span class="ruby-constant">SLEEP_TIME</span>) <span class="ruby-comment"># TODO(cgb): this should exponentially backoff</span>
|
|
606
|
+
<span class="ruby-keyword">end</span>
|
|
607
|
+
}
|
|
608
|
+
<span class="ruby-keyword">end</span></pre>
|
|
609
|
+
</div><!-- run_job-source -->
|
|
585
610
|
|
|
586
611
|
</div>
|
|
587
612
|
|
|
588
613
|
|
|
589
614
|
|
|
590
615
|
|
|
591
|
-
</div
|
|
616
|
+
</div><!-- run_job-method -->
|
|
592
617
|
|
|
593
618
|
|
|
594
|
-
<div id="validate_inputs
|
|
595
|
-
<a name="method-c-validate_inputs"></a>
|
|
596
|
-
|
|
619
|
+
<div id="method-c-validate_inputs" class="method-detail ">
|
|
597
620
|
|
|
598
621
|
<div class="method-heading">
|
|
599
622
|
<span class="method-name">validate_inputs</span><span
|
|
@@ -610,44 +633,40 @@ them for computation.</p>
|
|
|
610
633
|
|
|
611
634
|
|
|
612
635
|
|
|
613
|
-
<div class="method-source-code"
|
|
614
|
-
|
|
615
|
-
<
|
|
616
|
-
<span class="ruby-
|
|
617
|
-
def self.validate_inputs(job_data)
|
|
618
|
-
controller = self.get_appcontroller(job_data)
|
|
636
|
+
<div class="method-source-code" id="validate_inputs-source">
|
|
637
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 159</span>
|
|
638
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">validate_inputs</span>(<span class="ruby-identifier">job_data</span>)
|
|
639
|
+
<span class="ruby-identifier">controller</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_neptune_manager_client</span>(<span class="ruby-identifier">job_data</span>)
|
|
619
640
|
|
|
620
641
|
<span class="ruby-comment"># First, make sure the code exists</span>
|
|
621
|
-
<span class="ruby-constant">NeptuneHelper</span
|
|
642
|
+
<span class="ruby-constant">NeptuneHelper</span>.<span class="ruby-identifier">require_file_to_exist</span>(<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@code"</span>], <span class="ruby-identifier">job_data</span>, <span class="ruby-identifier">controller</span>)
|
|
622
643
|
|
|
623
|
-
if job_data[<span class="ruby-string">"@argv"</span>]
|
|
624
|
-
return
|
|
625
|
-
end
|
|
644
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>].<span class="ruby-identifier">nil?</span> <span class="ruby-keyword">or</span> <span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>].<span class="ruby-identifier">empty?</span>
|
|
645
|
+
<span class="ruby-keyword">return</span>
|
|
646
|
+
<span class="ruby-keyword">end</span>
|
|
626
647
|
|
|
627
648
|
<span class="ruby-comment"># We assume anything that begins with a slash is a remote file</span>
|
|
628
|
-
job_data[<span class="ruby-string">"@argv"</span>]
|
|
629
|
-
if arg[0]
|
|
630
|
-
<span class="ruby-constant">NeptuneHelper</span
|
|
631
|
-
end
|
|
649
|
+
<span class="ruby-identifier">job_data</span>[<span class="ruby-string">"@argv"</span>].<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">arg</span><span class="ruby-operator">|</span>
|
|
650
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">arg</span>[<span class="ruby-value">0</span>].<span class="ruby-identifier">chr</span> <span class="ruby-operator">==</span> <span class="ruby-string">"/"</span>
|
|
651
|
+
<span class="ruby-constant">NeptuneHelper</span>.<span class="ruby-identifier">require_file_to_exist</span>(<span class="ruby-identifier">arg</span>, <span class="ruby-identifier">job_data</span>, <span class="ruby-identifier">controller</span>)
|
|
652
|
+
<span class="ruby-keyword">end</span>
|
|
632
653
|
}
|
|
633
|
-
end</pre>
|
|
634
|
-
</div
|
|
654
|
+
<span class="ruby-keyword">end</span></pre>
|
|
655
|
+
</div><!-- validate_inputs-source -->
|
|
635
656
|
|
|
636
657
|
</div>
|
|
637
658
|
|
|
638
659
|
|
|
639
660
|
|
|
640
661
|
|
|
641
|
-
</div
|
|
662
|
+
</div><!-- validate_inputs-method -->
|
|
642
663
|
|
|
643
664
|
|
|
644
|
-
<div id="wait_and_get_output
|
|
645
|
-
<a name="method-c-wait_and_get_output"></a>
|
|
646
|
-
|
|
665
|
+
<div id="method-c-wait_and_get_output" class="method-detail ">
|
|
647
666
|
|
|
648
667
|
<div class="method-heading">
|
|
649
668
|
<span class="method-name">wait_and_get_output</span><span
|
|
650
|
-
class="method-args">(job_data)</span>
|
|
669
|
+
class="method-args">(job_data, output_location)</span>
|
|
651
670
|
<span class="method-click-advice">click to toggle source</span>
|
|
652
671
|
</div>
|
|
653
672
|
|
|
@@ -660,52 +679,50 @@ output of the job.</p>
|
|
|
660
679
|
|
|
661
680
|
|
|
662
681
|
|
|
663
|
-
<div class="method-source-code"
|
|
664
|
-
|
|
665
|
-
<
|
|
666
|
-
<span class="ruby-
|
|
667
|
-
|
|
668
|
-
output_data =
|
|
669
|
-
output_data[:type] = <span class="ruby-string">"output"</span>
|
|
682
|
+
<div class="method-source-code" id="wait_and_get_output-source">
|
|
683
|
+
<pre><span class="ruby-comment"># File lib/babel.rb, line 324</span>
|
|
684
|
+
<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">wait_and_get_output</span>(<span class="ruby-identifier">job_data</span>, <span class="ruby-identifier">output_location</span>)
|
|
685
|
+
<span class="ruby-identifier">output_data</span> = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">convert_to_neptune_params</span>(<span class="ruby-identifier">job_data</span>)
|
|
686
|
+
<span class="ruby-identifier">output_data</span>[<span class="ruby-value">:type</span>] = <span class="ruby-string">"output"</span>
|
|
687
|
+
<span class="ruby-identifier">output_data</span>[<span class="ruby-value">:output</span>] = <span class="ruby-identifier">output_location</span>
|
|
670
688
|
|
|
671
|
-
output = <span class="ruby-string">""</span>
|
|
672
|
-
time_to_sleep = <span class="ruby-constant">SLEEP_TIME</span>
|
|
673
|
-
loop {
|
|
674
|
-
output = <span class="ruby-constant">Kernel</span
|
|
675
|
-
if output
|
|
689
|
+
<span class="ruby-identifier">output</span> = <span class="ruby-string">""</span>
|
|
690
|
+
<span class="ruby-identifier">time_to_sleep</span> = <span class="ruby-constant">SLEEP_TIME</span>
|
|
691
|
+
<span class="ruby-identifier">loop</span> {
|
|
692
|
+
<span class="ruby-identifier">output</span> = <span class="ruby-constant">Kernel</span>.<span class="ruby-identifier">neptune</span>(<span class="ruby-identifier">output_data</span>)[<span class="ruby-value">:output</span>]
|
|
693
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">output</span> <span class="ruby-operator">==</span> <span class="ruby-constant">DOES_NOT_EXIST</span>
|
|
676
694
|
<span class="ruby-comment"># Exponentially back off, up to a limit of MAX_SLEEP_TIME</span>
|
|
677
|
-
<span class="ruby-constant">Kernel</span
|
|
678
|
-
|
|
679
|
-
|
|
680
|
-
end
|
|
681
|
-
else
|
|
682
|
-
break
|
|
683
|
-
end
|
|
695
|
+
<span class="ruby-constant">Kernel</span>.<span class="ruby-identifier">sleep</span>(<span class="ruby-identifier">time_to_sleep</span>)
|
|
696
|
+
<span class="ruby-comment">#if time_to_sleep < MAX_SLEEP_TIME</span>
|
|
697
|
+
<span class="ruby-comment"># time_to_sleep *= 2</span>
|
|
698
|
+
<span class="ruby-comment">#end</span>
|
|
699
|
+
<span class="ruby-keyword">else</span>
|
|
700
|
+
<span class="ruby-keyword">break</span>
|
|
701
|
+
<span class="ruby-keyword">end</span>
|
|
684
702
|
}
|
|
685
703
|
|
|
686
|
-
return output
|
|
687
|
-
end</pre>
|
|
688
|
-
</div
|
|
704
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">output</span>
|
|
705
|
+
<span class="ruby-keyword">end</span></pre>
|
|
706
|
+
</div><!-- wait_and_get_output-source -->
|
|
689
707
|
|
|
690
708
|
</div>
|
|
691
709
|
|
|
692
710
|
|
|
693
711
|
|
|
694
712
|
|
|
695
|
-
</div
|
|
713
|
+
</div><!-- wait_and_get_output-method -->
|
|
696
714
|
|
|
697
715
|
|
|
698
|
-
</
|
|
716
|
+
</section><!-- public-class-method-details -->
|
|
699
717
|
|
|
718
|
+
</section><!-- 5Buntitled-5D -->
|
|
700
719
|
|
|
701
|
-
|
|
720
|
+
</div><!-- documentation -->
|
|
702
721
|
|
|
703
|
-
<div id="validator-badges">
|
|
704
|
-
<p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
|
|
705
|
-
<p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
|
|
706
|
-
Rdoc Generator</a> 2</small>.</p>
|
|
707
|
-
</div>
|
|
708
722
|
|
|
709
|
-
|
|
710
|
-
</
|
|
723
|
+
<footer id="validator-badges">
|
|
724
|
+
<p><a href="http://validator.w3.org/check/referer">[Validate]</a>
|
|
725
|
+
<p>Generated by <a href="https://github.com/rdoc/rdoc">RDoc</a> 3.12.
|
|
726
|
+
<p>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish Rdoc Generator</a> 3.
|
|
727
|
+
</footer>
|
|
711
728
|
|