ncs_mdes_warehouse 0.12.0 → 0.13.0
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- data/CHANGELOG.md +23 -0
- data/lib/ncs_navigator/warehouse.rb +2 -0
- data/lib/ncs_navigator/warehouse/cli.rb +10 -2
- data/lib/ncs_navigator/warehouse/configuration.rb +80 -0
- data/lib/ncs_navigator/warehouse/configuration/file_evaluator.rb +1 -1
- data/lib/ncs_navigator/warehouse/contents.rb +77 -0
- data/lib/ncs_navigator/warehouse/filters.rb +19 -0
- data/lib/ncs_navigator/warehouse/filters/add_id_prefix_filter.rb +32 -0
- data/lib/ncs_navigator/warehouse/{transformers → filters}/apply_global_values_filter.rb +1 -1
- data/lib/ncs_navigator/warehouse/{transformers → filters}/coded_as_missing_filter.rb +1 -1
- data/lib/ncs_navigator/warehouse/filters/composite_filter.rb +77 -0
- data/lib/ncs_navigator/warehouse/{transformers → filters}/no_blank_foreign_keys_filter.rb +1 -1
- data/lib/ncs_navigator/warehouse/{transformers → filters}/no_ssu_outreach_all_ssus_filter.rb +1 -1
- data/lib/ncs_navigator/warehouse/{transformers → filters}/no_ssu_outreach_placeholder_filter.rb +1 -1
- data/lib/ncs_navigator/warehouse/filters/record_id_changing_filter_support.rb +71 -0
- data/lib/ncs_navigator/warehouse/filters/remove_id_prefix_filter.rb +32 -0
- data/lib/ncs_navigator/warehouse/transformers.rb +0 -6
- data/lib/ncs_navigator/warehouse/transformers/database.rb +14 -8
- data/lib/ncs_navigator/warehouse/transformers/enum_transformer.rb +5 -3
- data/lib/ncs_navigator/warehouse/version.rb +1 -1
- data/lib/ncs_navigator/warehouse/xml_emitter.rb +101 -50
- data/sample_configuration.rb +12 -0
- data/spec/ncs_navigator/warehouse/configuration_spec.rb +102 -0
- data/spec/ncs_navigator/warehouse/contents_spec.rb +166 -0
- data/spec/ncs_navigator/warehouse/filters/add_id_prefix_filter_spec.rb +82 -0
- data/spec/ncs_navigator/warehouse/{transformers → filters}/apply_global_values_filter_spec.rb +1 -1
- data/spec/ncs_navigator/warehouse/{transformers → filters}/coded_as_missing_filter_spec.rb +1 -1
- data/spec/ncs_navigator/warehouse/{transformers/filters_spec.rb → filters/composite_filter_spec.rb} +8 -8
- data/spec/ncs_navigator/warehouse/{transformers → filters}/no_blank_foreign_keys_filter_spec.rb +1 -1
- data/spec/ncs_navigator/warehouse/{transformers → filters}/no_ssu_outreach_all_ssus_filter_spec.rb +1 -1
- data/spec/ncs_navigator/warehouse/{transformers → filters}/no_ssu_outreach_placeholder_filter_spec.rb +1 -1
- data/spec/ncs_navigator/warehouse/filters/remove_id_prefix_filter_spec.rb +95 -0
- data/spec/ncs_navigator/warehouse/xml_emitter_spec.rb +94 -0
- metadata +33 -22
- data/lib/ncs_navigator/warehouse/transformers/filters.rb +0 -66
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
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name: ncs_mdes_warehouse
|
3
3
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version: !ruby/object:Gem::Version
|
4
|
-
version: 0.
|
4
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+
version: 0.13.0
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -9,7 +9,7 @@ authors:
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|
9
9
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autorequire:
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
|
-
date: 2013-
|
12
|
+
date: 2013-04-30 00:00:00.000000000 Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: ncs_mdes
|
@@ -2890,9 +2890,20 @@ files:
|
|
2890
2890
|
- lib/ncs_navigator/warehouse/comparator.rb
|
2891
2891
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- lib/ncs_navigator/warehouse/configuration.rb
|
2892
2892
|
- lib/ncs_navigator/warehouse/configuration/file_evaluator.rb
|
2893
|
+
- lib/ncs_navigator/warehouse/contents.rb
|
2893
2894
|
- lib/ncs_navigator/warehouse/data_mapper.rb
|
2894
2895
|
- lib/ncs_navigator/warehouse/data_mapper_patches.rb
|
2895
2896
|
- lib/ncs_navigator/warehouse/database_initializer.rb
|
2897
|
+
- lib/ncs_navigator/warehouse/filters.rb
|
2898
|
+
- lib/ncs_navigator/warehouse/filters/add_id_prefix_filter.rb
|
2899
|
+
- lib/ncs_navigator/warehouse/filters/apply_global_values_filter.rb
|
2900
|
+
- lib/ncs_navigator/warehouse/filters/coded_as_missing_filter.rb
|
2901
|
+
- lib/ncs_navigator/warehouse/filters/composite_filter.rb
|
2902
|
+
- lib/ncs_navigator/warehouse/filters/no_blank_foreign_keys_filter.rb
|
2903
|
+
- lib/ncs_navigator/warehouse/filters/no_ssu_outreach_all_ssus_filter.rb
|
2904
|
+
- lib/ncs_navigator/warehouse/filters/no_ssu_outreach_placeholder_filter.rb
|
2905
|
+
- lib/ncs_navigator/warehouse/filters/record_id_changing_filter_support.rb
|
2906
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+
- lib/ncs_navigator/warehouse/filters/remove_id_prefix_filter.rb
|
2896
2907
|
- lib/ncs_navigator/warehouse/hooks.rb
|
2897
2908
|
- lib/ncs_navigator/warehouse/hooks/etl_status_email.rb
|
2898
2909
|
- lib/ncs_navigator/warehouse/mailer_templates/etl_status_email/failure_message.text.erb
|
@@ -2909,21 +2920,15 @@ files:
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|
2909
2920
|
- lib/ncs_navigator/warehouse/transform_load.rb
|
2910
2921
|
- lib/ncs_navigator/warehouse/transform_status.rb
|
2911
2922
|
- lib/ncs_navigator/warehouse/transformers.rb
|
2912
|
-
- lib/ncs_navigator/warehouse/transformers/apply_global_values_filter.rb
|
2913
|
-
- lib/ncs_navigator/warehouse/transformers/coded_as_missing_filter.rb
|
2914
2923
|
- lib/ncs_navigator/warehouse/transformers/database.rb
|
2915
2924
|
- lib/ncs_navigator/warehouse/transformers/enum_transformer.rb
|
2916
2925
|
- lib/ncs_navigator/warehouse/transformers/event_start_from_contact_transformer.rb
|
2917
|
-
- lib/ncs_navigator/warehouse/transformers/filters.rb
|
2918
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|
- lib/ncs_navigator/warehouse/transformers/foreign_key_index.rb
|
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|
- lib/ncs_navigator/warehouse/transformers/foreign_key_index/database_key_provider.rb
|
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|
- lib/ncs_navigator/warehouse/transformers/foreign_key_index/static_key_provider.rb
|
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|
- lib/ncs_navigator/warehouse/transformers/mdes_csv.rb
|
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|
- lib/ncs_navigator/warehouse/transformers/mdes_csv/multiple_table_reader.rb
|
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|
- lib/ncs_navigator/warehouse/transformers/mdes_csv/table_reader.rb
|
2924
|
-
- lib/ncs_navigator/warehouse/transformers/no_blank_foreign_keys_filter.rb
|
2925
|
-
- lib/ncs_navigator/warehouse/transformers/no_ssu_outreach_all_ssus_filter.rb
|
2926
|
-
- lib/ncs_navigator/warehouse/transformers/no_ssu_outreach_placeholder_filter.rb
|
2927
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|
- lib/ncs_navigator/warehouse/transformers/sampling_units.rb
|
2928
2933
|
- lib/ncs_navigator/warehouse/transformers/sql/sql_statements.treetop
|
2929
2934
|
- lib/ncs_navigator/warehouse/transformers/sql_transformer.rb
|
@@ -2941,8 +2946,17 @@ files:
|
|
2941
2946
|
- spec/global_state_helper.rb
|
2942
2947
|
- spec/navigator.ini
|
2943
2948
|
- spec/ncs_navigator/warehouse/configuration_spec.rb
|
2949
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+
- spec/ncs_navigator/warehouse/contents_spec.rb
|
2944
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|
- spec/ncs_navigator/warehouse/data_mapper_spec.rb
|
2945
2951
|
- spec/ncs_navigator/warehouse/database_initializer_spec.rb
|
2952
|
+
- spec/ncs_navigator/warehouse/filters/add_id_prefix_filter_spec.rb
|
2953
|
+
- spec/ncs_navigator/warehouse/filters/apply_global_values_filter_spec.rb
|
2954
|
+
- spec/ncs_navigator/warehouse/filters/coded_as_missing_filter_spec.rb
|
2955
|
+
- spec/ncs_navigator/warehouse/filters/composite_filter_spec.rb
|
2956
|
+
- spec/ncs_navigator/warehouse/filters/no_blank_foreign_keys_filter_spec.rb
|
2957
|
+
- spec/ncs_navigator/warehouse/filters/no_ssu_outreach_all_ssus_filter_spec.rb
|
2958
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+
- spec/ncs_navigator/warehouse/filters/no_ssu_outreach_placeholder_filter_spec.rb
|
2959
|
+
- spec/ncs_navigator/warehouse/filters/remove_id_prefix_filter_spec.rb
|
2946
2960
|
- spec/ncs_navigator/warehouse/hooks/etl_status_email_spec.rb
|
2947
2961
|
- spec/ncs_navigator/warehouse/models/mdes_model_spec.rb
|
2948
2962
|
- spec/ncs_navigator/warehouse/models_spec.rb
|
@@ -2951,20 +2965,14 @@ files:
|
|
2951
2965
|
- spec/ncs_navigator/warehouse/table_modeler_spec.rb
|
2952
2966
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- spec/ncs_navigator/warehouse/transform_load_spec.rb
|
2953
2967
|
- spec/ncs_navigator/warehouse/transform_status_spec.rb
|
2954
|
-
- spec/ncs_navigator/warehouse/transformers/apply_global_values_filter_spec.rb
|
2955
|
-
- spec/ncs_navigator/warehouse/transformers/coded_as_missing_filter_spec.rb
|
2956
2968
|
- spec/ncs_navigator/warehouse/transformers/database_spec.rb
|
2957
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- spec/ncs_navigator/warehouse/transformers/enum_transformer_spec.rb
|
2958
2970
|
- spec/ncs_navigator/warehouse/transformers/event_start_from_contact_transformer_spec.rb
|
2959
|
-
- spec/ncs_navigator/warehouse/transformers/filters_spec.rb
|
2960
2971
|
- spec/ncs_navigator/warehouse/transformers/foreign_key_index/database_key_provider_spec.rb
|
2961
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|
- spec/ncs_navigator/warehouse/transformers/foreign_key_index_spec.rb
|
2962
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- spec/ncs_navigator/warehouse/transformers/mdes_csv/multiple_table_reader_spec.rb
|
2963
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- spec/ncs_navigator/warehouse/transformers/mdes_csv/table_reader_spec.rb
|
2964
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- spec/ncs_navigator/warehouse/transformers/mdes_csv_spec.rb
|
2965
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-
- spec/ncs_navigator/warehouse/transformers/no_blank_foreign_keys_filter_spec.rb
|
2966
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-
- spec/ncs_navigator/warehouse/transformers/no_ssu_outreach_all_ssus_filter_spec.rb
|
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-
- spec/ncs_navigator/warehouse/transformers/no_ssu_outreach_placeholder_filter_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/sampling_units_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/sql_transformer_spec.rb
|
2970
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- spec/ncs_navigator/warehouse/transformers/subprocess_transformer_spec.rb
|
@@ -2992,7 +3000,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
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2992
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version: '0'
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2993
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segments:
|
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- 0
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-
hash:
|
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+
hash: 2914256523883206240
|
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|
required_rubygems_version: !ruby/object:Gem::Requirement
|
2997
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none: false
|
2998
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requirements:
|
@@ -3001,7 +3009,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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version: '0'
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segments:
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- 0
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hash:
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hash: 2914256523883206240
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requirements: []
|
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rubyforge_project:
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3007
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rubygems_version: 1.8.25
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@@ -3016,8 +3024,17 @@ test_files:
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3016
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- spec/global_state_helper.rb
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- spec/navigator.ini
|
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- spec/ncs_navigator/warehouse/configuration_spec.rb
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+
- spec/ncs_navigator/warehouse/contents_spec.rb
|
3019
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- spec/ncs_navigator/warehouse/data_mapper_spec.rb
|
3020
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- spec/ncs_navigator/warehouse/database_initializer_spec.rb
|
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+
- spec/ncs_navigator/warehouse/filters/add_id_prefix_filter_spec.rb
|
3031
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+
- spec/ncs_navigator/warehouse/filters/apply_global_values_filter_spec.rb
|
3032
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+
- spec/ncs_navigator/warehouse/filters/coded_as_missing_filter_spec.rb
|
3033
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+
- spec/ncs_navigator/warehouse/filters/composite_filter_spec.rb
|
3034
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+
- spec/ncs_navigator/warehouse/filters/no_blank_foreign_keys_filter_spec.rb
|
3035
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+
- spec/ncs_navigator/warehouse/filters/no_ssu_outreach_all_ssus_filter_spec.rb
|
3036
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+
- spec/ncs_navigator/warehouse/filters/no_ssu_outreach_placeholder_filter_spec.rb
|
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- spec/ncs_navigator/warehouse/filters/remove_id_prefix_filter_spec.rb
|
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- spec/ncs_navigator/warehouse/hooks/etl_status_email_spec.rb
|
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- spec/ncs_navigator/warehouse/models/mdes_model_spec.rb
|
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- spec/ncs_navigator/warehouse/models_spec.rb
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@@ -3026,20 +3043,14 @@ test_files:
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- spec/ncs_navigator/warehouse/table_modeler_spec.rb
|
3027
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- spec/ncs_navigator/warehouse/transform_load_spec.rb
|
3028
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- spec/ncs_navigator/warehouse/transform_status_spec.rb
|
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-
- spec/ncs_navigator/warehouse/transformers/apply_global_values_filter_spec.rb
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-
- spec/ncs_navigator/warehouse/transformers/coded_as_missing_filter_spec.rb
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- spec/ncs_navigator/warehouse/transformers/database_spec.rb
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- spec/ncs_navigator/warehouse/transformers/enum_transformer_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/event_start_from_contact_transformer_spec.rb
|
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-
- spec/ncs_navigator/warehouse/transformers/filters_spec.rb
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- spec/ncs_navigator/warehouse/transformers/foreign_key_index/database_key_provider_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/foreign_key_index_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/mdes_csv/multiple_table_reader_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/mdes_csv/table_reader_spec.rb
|
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- spec/ncs_navigator/warehouse/transformers/mdes_csv_spec.rb
|
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-
- spec/ncs_navigator/warehouse/transformers/no_blank_foreign_keys_filter_spec.rb
|
3041
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-
- spec/ncs_navigator/warehouse/transformers/no_ssu_outreach_all_ssus_filter_spec.rb
|
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-
- spec/ncs_navigator/warehouse/transformers/no_ssu_outreach_placeholder_filter_spec.rb
|
3043
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- spec/ncs_navigator/warehouse/transformers/sampling_units_spec.rb
|
3044
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- spec/ncs_navigator/warehouse/transformers/sql_transformer_spec.rb
|
3045
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- spec/ncs_navigator/warehouse/transformers/subprocess_transformer_spec.rb
|
@@ -1,66 +0,0 @@
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1
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-
require 'forwardable'
|
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-
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module NcsNavigator::Warehouse::Transformers
|
4
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-
##
|
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# Encapsulates an ordered list of filters that can be applied to a
|
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# record coming out of an enumeration in {EnumTransformer}.
|
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#
|
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# Each filter is an object with an `call` method. The `call`
|
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# method takes an array of zero or more records as input and returns
|
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# an array of zero or more records. The input and output arrays may
|
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# be the same or different. A filter may add, remove, or mutate
|
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-
# records (or all three).
|
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#
|
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# A filter will be called multiple times for a single transform run,
|
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# but it will never see the same record twice. To put it another
|
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# way, the first filter will be invoked exactly once per record
|
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# yielded from an {EnumTransformer}'s enumeration. Subsequent
|
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# filters are invoked on return value from the previous filter.
|
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#
|
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# Depending on the filter order, a particular filter may never see
|
21
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-
# some of the eventually transformed records. This will happen if
|
22
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-
# records are created by a filter lower in the filter chain.
|
23
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-
class Filters
|
24
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-
include Enumerable
|
25
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-
extend Forwardable
|
26
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-
|
27
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-
def_delegators :@filters, :each
|
28
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-
|
29
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-
attr_accessor :filters
|
30
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-
|
31
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-
def initialize(filter_objects)
|
32
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-
check_filters(filter_objects)
|
33
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-
|
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-
@filters = filter_objects
|
35
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-
end
|
36
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-
|
37
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-
##
|
38
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-
# @param records [Array] zero or more records to filter.
|
39
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-
# @return [Array] the filtered records.
|
40
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-
def call(records)
|
41
|
-
filters.inject(ensure_array(records)) { |result, filter| ensure_array(filter.call(result)) }
|
42
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-
end
|
43
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-
|
44
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-
private
|
45
|
-
|
46
|
-
def check_filters(candidates)
|
47
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-
candidates.each_with_index do |f, i|
|
48
|
-
unless f.respond_to?(:call)
|
49
|
-
fail "Filter #{i} (#{f.class}) does not have a call method"
|
50
|
-
end
|
51
|
-
end
|
52
|
-
end
|
53
|
-
|
54
|
-
def ensure_array(records)
|
55
|
-
case records
|
56
|
-
when nil
|
57
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-
[]
|
58
|
-
when Enumerable
|
59
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-
records.to_a
|
60
|
-
else
|
61
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[records]
|
62
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-
end
|
63
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-
end
|
64
|
-
end
|
65
|
-
end
|
66
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-
|