ncs_mdes 0.4.1 → 0.4.2
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- data/.gitignore +3 -0
- data/.rvmrc +1 -1
- data/CHANGELOG.md +8 -2
- data/Rakefile +8 -0
- data/bin/mdes-console +10 -0
- data/ci-exec.sh +43 -0
- data/lib/ncs_navigator/mdes/source_documents.rb +16 -6
- data/lib/ncs_navigator/mdes/specification.rb +8 -1
- data/lib/ncs_navigator/mdes/variable.rb +5 -5
- data/lib/ncs_navigator/mdes/version.rb +1 -1
- data/ncs_mdes.gemspec +1 -0
- data/spec/ncs_navigator/mdes/source_documents_spec.rb +11 -3
- data/spec/ncs_navigator/mdes/specification_spec.rb +12 -3
- metadata +71 -88
data/.gitignore
CHANGED
data/.rvmrc
CHANGED
@@ -1 +1 @@
|
|
1
|
-
rvm
|
1
|
+
rvm @ncs_mdes --create
|
data/CHANGELOG.md
CHANGED
@@ -1,11 +1,17 @@
|
|
1
1
|
NCS Navigator MDES Module history
|
2
2
|
=================================
|
3
3
|
|
4
|
+
0.4.2
|
5
|
+
-----
|
6
|
+
|
7
|
+
- Add `specification_version` to distinguish from the short version
|
8
|
+
names we use for easy reference. (#6)
|
9
|
+
|
4
10
|
0.4.1
|
5
11
|
-----
|
6
12
|
|
7
|
-
- Add separate
|
8
|
-
|
13
|
+
- Add separate `omittable?` and `nillable?` subconditions of
|
14
|
+
`required?` (#4).
|
9
15
|
|
10
16
|
0.4.0
|
11
17
|
-----
|
data/Rakefile
CHANGED
@@ -1,7 +1,15 @@
|
|
1
1
|
require 'bundler/gem_tasks'
|
2
2
|
|
3
3
|
require 'rspec/core/rake_task'
|
4
|
+
require 'ci/reporter/rake/rspec'
|
4
5
|
|
5
6
|
RSpec::Core::RakeTask.new do |t|
|
6
7
|
t.pattern = "spec/**/*_spec.rb"
|
7
8
|
end
|
9
|
+
|
10
|
+
namespace :ci do
|
11
|
+
ENV["CI_REPORTS"] = "reports/spec-xml"
|
12
|
+
|
13
|
+
desc "Run specs for CI"
|
14
|
+
task :spec => ['ci:setup:rspec', 'rake:spec']
|
15
|
+
end
|
data/bin/mdes-console
CHANGED
@@ -4,6 +4,16 @@
|
|
4
4
|
# Provides a IRB session with a NcsNavigator::Mdes::Specification instance
|
5
5
|
# for free-form prodding.
|
6
6
|
|
7
|
+
# Allow this executable to be run directly from the source as well as
|
8
|
+
# from an installed gem.
|
9
|
+
begin
|
10
|
+
lib = File.expand_path('../../lib', __FILE__)
|
11
|
+
unless $LOAD_PATH.include?(lib)
|
12
|
+
$LOAD_PATH << lib
|
13
|
+
require 'rubygems'
|
14
|
+
end
|
15
|
+
end
|
16
|
+
|
7
17
|
require 'irb'
|
8
18
|
require 'ncs_navigator/mdes'
|
9
19
|
|
data/ci-exec.sh
ADDED
@@ -0,0 +1,43 @@
|
|
1
|
+
#!/bin/bash -xe
|
2
|
+
|
3
|
+
BUNDLER_VERSION=1.0.18
|
4
|
+
GEMSET=ncs_mdes
|
5
|
+
|
6
|
+
if [ -z $CI_RUBY ]; then
|
7
|
+
echo "CI_RUBY must be set"
|
8
|
+
exit 1
|
9
|
+
fi
|
10
|
+
|
11
|
+
set +xe
|
12
|
+
echo "Initializing RVM"
|
13
|
+
source ~/.rvm/scripts/rvm
|
14
|
+
set -xe
|
15
|
+
|
16
|
+
# On the overnight build, reinstall all gems
|
17
|
+
if [ `date +%H` -lt 5 ]; then
|
18
|
+
set +xe
|
19
|
+
echo "Purging gemset to verify that all deps can still be installed"
|
20
|
+
rvm --force $CI_RUBY gemset delete $GEMSET
|
21
|
+
set -xe
|
22
|
+
fi
|
23
|
+
|
24
|
+
RVM_CONFIG="${CI_RUBY}@${GEMSET}"
|
25
|
+
set +xe
|
26
|
+
echo "Switching to ${RVM_CONFIG}"
|
27
|
+
rvm use $RVM_CONFIG
|
28
|
+
set -xe
|
29
|
+
|
30
|
+
which ruby
|
31
|
+
ruby -v
|
32
|
+
|
33
|
+
set +e
|
34
|
+
gem list -i bundler -v $BUNDLER_VERSION
|
35
|
+
if [ $? -ne 0 ]; then
|
36
|
+
set -e
|
37
|
+
gem install bundler -v $BUNDLER_VERSION
|
38
|
+
fi
|
39
|
+
set -e
|
40
|
+
|
41
|
+
bundle update
|
42
|
+
|
43
|
+
bundle exec rake ci:spec --trace
|
@@ -29,6 +29,11 @@ module NcsNavigator::Mdes
|
|
29
29
|
# @return [String]
|
30
30
|
attr_accessor :version
|
31
31
|
|
32
|
+
##
|
33
|
+
# @return [String] The specification version that these documents
|
34
|
+
# describe, if more specific than the overall version.
|
35
|
+
attr_accessor :specification_version
|
36
|
+
|
32
37
|
##
|
33
38
|
# Instance-level alias for {.xmlns}.
|
34
39
|
# @method xmlns
|
@@ -45,18 +50,19 @@ module NcsNavigator::Mdes
|
|
45
50
|
when '1.2'
|
46
51
|
create('1.2', '1.2/Data_Transmission_Schema_V1.2.xsd')
|
47
52
|
when '2.0'
|
48
|
-
create('2.0', '2.0/NCS_Transmission_Schema_2.0.01.02.xml')
|
53
|
+
create('2.0', '2.0/NCS_Transmission_Schema_2.0.01.02.xml', '2.0.01.02')
|
49
54
|
else
|
50
55
|
raise "MDES #{version} is not supported by this version of ncs_mdes"
|
51
56
|
end
|
52
57
|
end
|
53
58
|
|
54
|
-
def create(version, schema)
|
59
|
+
def create(version, schema, specification_version=nil)
|
55
60
|
self.new.tap do |sd|
|
56
61
|
sd.version = version
|
57
62
|
sd.schema = schema
|
58
63
|
sd.heuristic_overrides = "#{version}/heuristic_overrides.yml"
|
59
64
|
sd.disposition_codes = "#{version}/disposition_codes.yml"
|
65
|
+
sd.specification_version = specification_version
|
60
66
|
end
|
61
67
|
end
|
62
68
|
private :create
|
@@ -82,6 +88,10 @@ module NcsNavigator::Mdes
|
|
82
88
|
)
|
83
89
|
end
|
84
90
|
|
91
|
+
def specification_version
|
92
|
+
@specification_version || self.version
|
93
|
+
end
|
94
|
+
|
85
95
|
##
|
86
96
|
# The absolute path to the XML Schema describing the MDES
|
87
97
|
# transmission structure for this instance.
|
@@ -126,20 +136,20 @@ module NcsNavigator::Mdes
|
|
126
136
|
def heuristic_overrides=(path)
|
127
137
|
@heuristic_overrides = path
|
128
138
|
end
|
129
|
-
|
139
|
+
|
130
140
|
##
|
131
141
|
# The absolute path to a YAML-formatted document defining
|
132
|
-
# the disposition codes as found in the Master Data Element Specifications
|
142
|
+
# the disposition codes as found in the Master Data Element Specifications
|
133
143
|
# spreadsheet.
|
134
144
|
#
|
135
|
-
# This is path is optional; if one is not provided no disposition
|
145
|
+
# This is path is optional; if one is not provided no disposition
|
136
146
|
# codes will be loaded.
|
137
147
|
#
|
138
148
|
# @return [String]
|
139
149
|
def disposition_codes
|
140
150
|
absolutize(@disposition_codes)
|
141
151
|
end
|
142
|
-
|
152
|
+
|
143
153
|
##
|
144
154
|
# Set the path to the disposition codes document.
|
145
155
|
# If the path is relative (i.e., it does not begin with `/`), it
|
@@ -19,6 +19,13 @@ module NcsNavigator::Mdes
|
|
19
19
|
# @return [String] the version of the MDES to which this instance refers.
|
20
20
|
def_delegator :@source_documents, :version
|
21
21
|
|
22
|
+
##
|
23
|
+
# @method specification_version
|
24
|
+
# @return [String] the exact version this specification
|
25
|
+
# matches. It may be more exact than the requested version due
|
26
|
+
# to applied patches.
|
27
|
+
def_delegator :@source_documents, :specification_version
|
28
|
+
|
22
29
|
##
|
23
30
|
# @param [String,SourceDocuments] version either the string
|
24
31
|
# version of the MDES metadata you would like to read, or a
|
@@ -143,7 +150,7 @@ module NcsNavigator::Mdes
|
|
143
150
|
end
|
144
151
|
end
|
145
152
|
end
|
146
|
-
|
153
|
+
|
147
154
|
def empty_disposition_codes
|
148
155
|
[]
|
149
156
|
end
|
@@ -53,8 +53,8 @@ module NcsNavigator::Mdes
|
|
53
53
|
attr_writer :required
|
54
54
|
|
55
55
|
##
|
56
|
-
# If this variable is a foreign key, this is the
|
57
|
-
# TransmissionTable} to which it refers.
|
56
|
+
# If this variable is a foreign key, this is the
|
57
|
+
# {TransmissionTable table} to which it refers.
|
58
58
|
#
|
59
59
|
# @return [TransmissionTable,nil] the parent table.
|
60
60
|
attr_accessor :table_reference
|
@@ -153,9 +153,9 @@ module NcsNavigator::Mdes
|
|
153
153
|
end
|
154
154
|
|
155
155
|
##
|
156
|
-
# Attempts to resolve this variable as a {
|
157
|
-
# table
|
158
|
-
# the resolution:
|
156
|
+
# Attempts to resolve this variable as a {#table_reference
|
157
|
+
# reference to another table}. There are two mechanisms for
|
158
|
+
# performing the resolution:
|
159
159
|
#
|
160
160
|
# 1. If an `override_name` is provided, that table will be looked
|
161
161
|
# up in the provided table list. If it exists, it will be used,
|
data/ncs_mdes.gemspec
CHANGED
@@ -24,4 +24,5 @@ National Children's Study's Master Data Element Specification.
|
|
24
24
|
s.add_development_dependency 'rspec', '~> 2.6'
|
25
25
|
s.add_development_dependency 'rake', '~> 0.9.2'
|
26
26
|
s.add_development_dependency 'yard', '~> 0.7.2'
|
27
|
+
s.add_development_dependency 'ci_reporter', '~> 1.6'
|
27
28
|
end
|
@@ -60,7 +60,7 @@ module NcsNavigator::Mdes
|
|
60
60
|
SourceDocuments.new.heuristic_overrides.should be_nil
|
61
61
|
end
|
62
62
|
end
|
63
|
-
|
63
|
+
|
64
64
|
describe '#disposition_codes' do
|
65
65
|
let(:property) { :disposition_codes }
|
66
66
|
|
@@ -82,7 +82,7 @@ module NcsNavigator::Mdes
|
|
82
82
|
it 'has the correct path for the overrides' do
|
83
83
|
subject.heuristic_overrides.should =~ %r{1.2/heuristic_overrides.yml$}
|
84
84
|
end
|
85
|
-
|
85
|
+
|
86
86
|
it 'has the correct path for the disposition codes' do
|
87
87
|
subject.disposition_codes.should =~ %r{1.2/disposition_codes.yml$}
|
88
88
|
end
|
@@ -90,6 +90,10 @@ module NcsNavigator::Mdes
|
|
90
90
|
it 'is of the specified version' do
|
91
91
|
subject.version.should == '1.2'
|
92
92
|
end
|
93
|
+
|
94
|
+
it 'has no more specific specification_version' do
|
95
|
+
subject.specification_version.should == '1.2'
|
96
|
+
end
|
93
97
|
end
|
94
98
|
|
95
99
|
describe '2.0' do
|
@@ -102,7 +106,7 @@ module NcsNavigator::Mdes
|
|
102
106
|
it 'has the correct path for the overrides' do
|
103
107
|
subject.heuristic_overrides.should =~ %r{2.0/heuristic_overrides.yml$}
|
104
108
|
end
|
105
|
-
|
109
|
+
|
106
110
|
it 'has the correct path for the disposition codes' do
|
107
111
|
subject.disposition_codes.should =~ %r{2.0/disposition_codes.yml$}
|
108
112
|
end
|
@@ -110,6 +114,10 @@ module NcsNavigator::Mdes
|
|
110
114
|
it 'is of the specified version' do
|
111
115
|
subject.version.should == '2.0'
|
112
116
|
end
|
117
|
+
|
118
|
+
it 'has a different specification_version' do
|
119
|
+
subject.specification_version.should == '2.0.01.02'
|
120
|
+
end
|
113
121
|
end
|
114
122
|
|
115
123
|
it 'fails for an unsupported version' do
|
@@ -63,8 +63,17 @@ module NcsNavigator::Mdes
|
|
63
63
|
include_examples 'tables fully resolved'
|
64
64
|
end
|
65
65
|
end
|
66
|
-
|
67
|
-
|
66
|
+
|
67
|
+
describe '#specification_version' do
|
68
|
+
it 'is the named version by default' do
|
69
|
+
Specification.new('1.2').specification_version.should == '1.2'
|
70
|
+
end
|
71
|
+
|
72
|
+
it 'is the read-in version if the source has one' do
|
73
|
+
Specification.new('2.0').specification_version.should == '2.0.01.02'
|
74
|
+
end
|
75
|
+
end
|
76
|
+
|
68
77
|
describe '#disposition codes' do
|
69
78
|
it 'is composed of DispositionCode instances' do
|
70
79
|
Specification.new('2.0', :log => logger).disposition_codes.first.
|
@@ -85,7 +94,7 @@ module NcsNavigator::Mdes
|
|
85
94
|
it 'has 251 codes' do
|
86
95
|
disposition_codes.size.should == 251
|
87
96
|
end
|
88
|
-
|
97
|
+
|
89
98
|
it 'creates valid codes' do
|
90
99
|
code = disposition_codes.first
|
91
100
|
code.event.should == "Household Enumeration Event"
|
metadata
CHANGED
@@ -1,99 +1,85 @@
|
|
1
|
-
--- !ruby/object:Gem::Specification
|
1
|
+
--- !ruby/object:Gem::Specification
|
2
2
|
name: ncs_mdes
|
3
|
-
version: !ruby/object:Gem::Version
|
4
|
-
|
5
|
-
prerelease:
|
6
|
-
segments:
|
7
|
-
- 0
|
8
|
-
- 4
|
9
|
-
- 1
|
10
|
-
version: 0.4.1
|
3
|
+
version: !ruby/object:Gem::Version
|
4
|
+
version: 0.4.2
|
5
|
+
prerelease:
|
11
6
|
platform: ruby
|
12
|
-
authors:
|
7
|
+
authors:
|
13
8
|
- Rhett Sutphin
|
14
9
|
autorequire:
|
15
10
|
bindir: bin
|
16
11
|
cert_chain: []
|
17
|
-
|
18
|
-
|
19
|
-
|
20
|
-
dependencies:
|
21
|
-
- !ruby/object:Gem::Dependency
|
12
|
+
date: 2011-09-09 00:00:00.000000000Z
|
13
|
+
dependencies:
|
14
|
+
- !ruby/object:Gem::Dependency
|
22
15
|
name: nokogiri
|
23
|
-
|
24
|
-
requirement: &id001 !ruby/object:Gem::Requirement
|
16
|
+
requirement: &2152825220 !ruby/object:Gem::Requirement
|
25
17
|
none: false
|
26
|
-
requirements:
|
18
|
+
requirements:
|
27
19
|
- - ~>
|
28
|
-
- !ruby/object:Gem::Version
|
29
|
-
|
30
|
-
segments:
|
31
|
-
- 1
|
32
|
-
- 4
|
33
|
-
version: "1.4"
|
20
|
+
- !ruby/object:Gem::Version
|
21
|
+
version: '1.4'
|
34
22
|
type: :runtime
|
35
|
-
version_requirements: *id001
|
36
|
-
- !ruby/object:Gem::Dependency
|
37
|
-
name: rspec
|
38
23
|
prerelease: false
|
39
|
-
|
24
|
+
version_requirements: *2152825220
|
25
|
+
- !ruby/object:Gem::Dependency
|
26
|
+
name: rspec
|
27
|
+
requirement: &2152824560 !ruby/object:Gem::Requirement
|
40
28
|
none: false
|
41
|
-
requirements:
|
29
|
+
requirements:
|
42
30
|
- - ~>
|
43
|
-
- !ruby/object:Gem::Version
|
44
|
-
|
45
|
-
segments:
|
46
|
-
- 2
|
47
|
-
- 6
|
48
|
-
version: "2.6"
|
31
|
+
- !ruby/object:Gem::Version
|
32
|
+
version: '2.6'
|
49
33
|
type: :development
|
50
|
-
version_requirements: *id002
|
51
|
-
- !ruby/object:Gem::Dependency
|
52
|
-
name: rake
|
53
34
|
prerelease: false
|
54
|
-
|
35
|
+
version_requirements: *2152824560
|
36
|
+
- !ruby/object:Gem::Dependency
|
37
|
+
name: rake
|
38
|
+
requirement: &2152823680 !ruby/object:Gem::Requirement
|
55
39
|
none: false
|
56
|
-
requirements:
|
40
|
+
requirements:
|
57
41
|
- - ~>
|
58
|
-
- !ruby/object:Gem::Version
|
59
|
-
hash: 63
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segments:
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-
- 0
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- 9
|
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-
- 2
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+
- !ruby/object:Gem::Version
|
64
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|
version: 0.9.2
|
65
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|
type: :development
|
66
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version_requirements: *id003
|
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- !ruby/object:Gem::Dependency
|
68
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-
name: yard
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69
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|
prerelease: false
|
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-
|
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+
version_requirements: *2152823680
|
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+
- !ruby/object:Gem::Dependency
|
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+
name: yard
|
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+
requirement: &2152822920 !ruby/object:Gem::Requirement
|
71
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|
none: false
|
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|
-
requirements:
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+
requirements:
|
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|
- - ~>
|
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- !ruby/object:Gem::Version
|
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-
hash: 7
|
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segments:
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|
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|
80
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|
version: 0.7.2
|
81
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|
type: :development
|
82
|
-
|
83
|
-
|
84
|
-
|
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|
+
prerelease: false
|
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+
version_requirements: *2152822920
|
58
|
+
- !ruby/object:Gem::Dependency
|
59
|
+
name: ci_reporter
|
60
|
+
requirement: &2152822260 !ruby/object:Gem::Requirement
|
61
|
+
none: false
|
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|
+
requirements:
|
63
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+
- - ~>
|
64
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+
- !ruby/object:Gem::Version
|
65
|
+
version: '1.6'
|
66
|
+
type: :development
|
67
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+
prerelease: false
|
68
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+
version_requirements: *2152822260
|
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|
+
description: ! '
|
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|
+
|
85
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|
Provides a consistent ruby interface to the project metainformation in the
|
86
|
-
National Children's Study's Master Data Element Specification.
|
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72
|
|
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|
-
|
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|
+
National Children''s Study''s Master Data Element Specification.
|
74
|
+
|
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|
+
'
|
76
|
+
email:
|
89
77
|
- r-sutphin@northwestern.edu
|
90
|
-
executables:
|
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|
+
executables:
|
91
79
|
- mdes-console
|
92
80
|
extensions: []
|
93
|
-
|
94
81
|
extra_rdoc_files: []
|
95
|
-
|
96
|
-
files:
|
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|
+
files:
|
97
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|
- .gitignore
|
98
84
|
- .rvmrc
|
99
85
|
- .yardopts
|
@@ -102,6 +88,7 @@ files:
|
|
102
88
|
- README.md
|
103
89
|
- Rakefile
|
104
90
|
- bin/mdes-console
|
91
|
+
- ci-exec.sh
|
105
92
|
- documents/1.2/Data_Transmission_Schema_V1.2.xsd
|
106
93
|
- documents/1.2/heuristic_overrides.yml
|
107
94
|
- documents/2.0/NCS_Transmission_Schema_2.0.01.02.xml
|
@@ -124,41 +111,37 @@ files:
|
|
124
111
|
- spec/ncs_navigator/mdes/version_spec.rb
|
125
112
|
- spec/ncs_navigator/mdes_spec.rb
|
126
113
|
- spec/spec_helper.rb
|
127
|
-
|
128
|
-
homepage: ""
|
114
|
+
homepage: ''
|
129
115
|
licenses: []
|
130
|
-
|
131
116
|
post_install_message:
|
132
117
|
rdoc_options: []
|
133
|
-
|
134
|
-
require_paths:
|
118
|
+
require_paths:
|
135
119
|
- lib
|
136
|
-
required_ruby_version: !ruby/object:Gem::Requirement
|
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|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
137
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|
none: false
|
138
|
-
requirements:
|
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|
-
- -
|
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|
-
- !ruby/object:Gem::Version
|
141
|
-
|
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|
-
segments:
|
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|
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requirements:
|
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|
+
- - ! '>='
|
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|
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- !ruby/object:Gem::Version
|
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|
+
version: '0'
|
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|
+
segments:
|
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|
- 0
|
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|
-
|
145
|
-
required_rubygems_version: !ruby/object:Gem::Requirement
|
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|
+
hash: 1899662951154371602
|
129
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
146
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|
none: false
|
147
|
-
requirements:
|
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|
-
- -
|
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|
-
- !ruby/object:Gem::Version
|
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|
-
|
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|
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segments:
|
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requirements:
|
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+
- - ! '>='
|
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|
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|
+
version: '0'
|
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|
+
segments:
|
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|
- 0
|
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|
-
|
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|
+
hash: 1899662951154371602
|
154
138
|
requirements: []
|
155
|
-
|
156
139
|
rubyforge_project:
|
157
|
-
rubygems_version: 1.
|
140
|
+
rubygems_version: 1.8.6
|
158
141
|
signing_key:
|
159
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|
specification_version: 3
|
160
143
|
summary: A ruby API for various versions of the NCS MDES.
|
161
|
-
test_files:
|
144
|
+
test_files:
|
162
145
|
- spec/ncs_navigator/mdes/source_documents_spec.rb
|
163
146
|
- spec/ncs_navigator/mdes/specification_spec.rb
|
164
147
|
- spec/ncs_navigator/mdes/transmission_table_spec.rb
|