myexperiment-rest 0.3.0 → 0.3.2

data/CHANGES

@@ -1,5 +1,14 @@
 = Changes log for the MyExperiment via REST Gem
 
+== Version 0.3.2
+* Updated to libxml-ruby 2.2.2
+
+
+== Version 0.3.1
+* Renamed xml_uri to content_uri
+* added simple session cookie authentication
+
+
 == Version 0.3.0
 * Added User class to acquire myExperiment's user resource
 * Added a constants.rb file

data/README

@@ -1,7 +1,7 @@
 = MyExperiment Interaction via REST
 
 Authors::     Konstantinos Karasavvas
-Gem Version:: 0.3.0
+Gem Version:: 0.3.2
 Contact::     mailto:kostas.karasavvas@nbic.nl
 Licence::     MIT (See LICENCE or http://www.opensource.org/licenses/mit-license)
 Copyright::   (c) 2010 Netherlands Bioinformatics Centre, The Netherlands

data/Rakefile

@@ -7,7 +7,7 @@ require 'rdoc/task'
 
 spec = Gem::Specification.new do |s|
   s.name = 'myexperiment-rest'
-  s.version = '0.3.0'
+  s.version = '0.3.2'
   s.extra_rdoc_files = ['README', 'LICENSE', 'CHANGES']
   s.summary = 'This is a simple library to access data on myExperiment via its REST API.'
   s.description = 'This is a simple library to access data on myExperiment via its REST API. Currently supports a subset of the workflow information available.'
@@ -18,7 +18,7 @@ spec = Gem::Specification.new do |s|
   s.require_path = "lib"
   s.bindir = "bin"
   s.add_dependency 'rest-client', '~> 1.6.3'
-  s.add_dependency 'libxml-ruby', '~> 2.0.9'
+  s.add_dependency 'libxml-ruby', '~> 2.2.2'
 end
 
 Gem::PackageTask.new(spec) do |p|

data/bin/get_workflow_data.rb

@@ -10,7 +10,7 @@ wkf = Workflow.from_uri(my_exp_workflow)
 
 
 # general
-puts wkf.xml_uri
+puts wkf.content_uri
 puts wkf.title
 puts wkf.description
 puts wkf.uploader_uri

data/doc/rdoc/CHANGES.html

@@ -72,6 +72,8 @@
         
           <li><a href="./MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="./MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="./MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="./MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -90,6 +92,18 @@
     
 <h1>Changes log for the MyExperiment via REST Gem</h1>
 
+<h2>Version 0.3.2</h2>
+<ul><li>
+<p>Updated to libxml-ruby 2.2.2</p>
+</li></ul>
+
+<h2>Version 0.3.1</h2>
+<ul><li>
+<p>Renamed xml_uri to content_uri</p>
+</li><li>
+<p>added simple session cookie authentication</p>
+</li></ul>
+
 <h2>Version 0.3.0</h2>
 <ul><li>
 <p>Added User class to acquire myExperiment’s user resource</p>

data/doc/rdoc/LICENSE.html

@@ -72,6 +72,8 @@
         
           <li><a href="./MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="./MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="./MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="./MyExperimentREST/User.html">MyExperimentREST::User</a></li>

data/doc/rdoc/MyExperimentREST.html

@@ -43,6 +43,9 @@
             <li><a href="./lib/myexperiment-rest/user_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
               class="thickbox" title="lib/myexperiment-rest/user.rb">lib/myexperiment-rest/user.rb</a></li>
           
+            <li><a href="./lib/myexperiment-rest/authentication_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
+              class="thickbox" title="lib/myexperiment-rest/authentication.rb">lib/myexperiment-rest/authentication.rb</a></li>
+          
             <li><a href="./lib/myexperiment-rest/constants_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
               class="thickbox" title="lib/myexperiment-rest/constants.rb">lib/myexperiment-rest/constants.rb</a></li>
           
@@ -72,6 +75,8 @@
           
           <li><span class="type">CLASS</span> <a href="MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
           
+          <li><span class="type">CLASS</span> <a href="MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+          
           <li><span class="type">CLASS</span> <a href="MyExperimentREST/User.html">MyExperimentREST::User</a></li>
           
           <li><span class="type">CLASS</span> <a href="MyExperimentREST/Workflow.html">MyExperimentREST::Workflow</a></li>
@@ -135,6 +140,8 @@
         
           <li><a href="./MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="./MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="./MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="./MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -154,6 +161,8 @@
 
     <div id="description" class="description">
       
+<p>require ‘rest_client’</p>
+
     </div><!-- description -->
 
     
@@ -192,18 +201,27 @@ currently are <tt>WORKFLOW_URL</tt>“+ and <tt>USER_URL</tt>.</p>
             
             <div class="method-source-code" id="get_myexperiment_data-source">
 <pre>
-<span class="ruby-comment"># File lib/myexperiment-rest.rb, line 14</span>
+<span class="ruby-comment"># File lib/myexperiment-rest.rb, line 15</span>
 <span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">get_myexperiment_data</span>(<span class="ruby-identifier">resource_url</span>, <span class="ruby-identifier">params</span>)
   <span class="ruby-keyword">case</span> <span class="ruby-identifier">resource_url</span>
 
   <span class="ruby-keyword">when</span> <span class="ruby-constant">Urls</span><span class="ruby-operator">::</span><span class="ruby-constant">WORKFLOW_URL</span>
     <span class="ruby-keyword">begin</span>
       <span class="ruby-comment"># Get workflow resource information -- if version is empty it returns the current version</span>
-      <span class="ruby-identifier">response</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-node">&quot;#{Urls::MYEXPERIMENT_URL}/#{Urls::WORKFLOW_URL}&quot;</span>,
-                                       {<span class="ruby-value">:params</span> =<span class="ruby-operator">&gt;</span> {<span class="ruby-string">'id'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-node">&quot;#{params[:id]}&quot;</span>,
-                                                    <span class="ruby-string">'version'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-node">&quot;#{params[:version]}&quot;</span>,
-                                                    <span class="ruby-string">'elements'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-string">'title,description,content-uri,components,uploader'</span>} } )
-      <span class="ruby-identifier">response</span>
+      <span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-value">:session_cookie</span>].<span class="ruby-identifier">empty?</span>
+        <span class="ruby-identifier">response</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-node">&quot;#{Urls::MYEXPERIMENT_URL}/#{Urls::WORKFLOW_URL}&quot;</span>,
+                                         {<span class="ruby-value">:params</span> =<span class="ruby-operator">&gt;</span> {<span class="ruby-string">'id'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-node">&quot;#{params[:id]}&quot;</span>,
+                                                      <span class="ruby-string">'version'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-node">&quot;#{params[:version]}&quot;</span>,
+                                                      <span class="ruby-string">'elements'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-string">'title,description,content-uri,components,uploader'</span>} } )
+        <span class="ruby-identifier">response</span>      
+      <span class="ruby-keyword">else</span>    <span class="ruby-comment"># TODO: reduce repetition.. if else only for the cookie key-value pair!!</span>
+        <span class="ruby-identifier">response</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-node">&quot;#{Urls::MYEXPERIMENT_URL}/#{Urls::WORKFLOW_URL}&quot;</span>, 
+                                         {<span class="ruby-value">:params</span> =<span class="ruby-operator">&gt;</span> {<span class="ruby-string">'id'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-node">&quot;#{params[:id]}&quot;</span>,
+                                                      <span class="ruby-string">'version'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-node">&quot;#{params[:version]}&quot;</span>,
+                                                      <span class="ruby-string">'elements'</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-string">'title,description,content-uri,components,uploader'</span>},
+                                          <span class="ruby-value">:cookies</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">params</span>[<span class="ruby-value">:session_cookie</span>] } )
+        <span class="ruby-identifier">response</span>
+      <span class="ruby-keyword">end</span>
     <span class="ruby-keyword">rescue</span> <span class="ruby-constant">Exception</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">e</span>
       <span class="ruby-identifier">raise</span> <span class="ruby-string">&quot;REST call to acquire workflow resource failed!\n&quot;</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">e</span>
     <span class="ruby-keyword">end</span>

data/doc/rdoc/MyExperimentREST/MyExperimentIOData.html

@@ -116,6 +116,8 @@
         
           <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -227,7 +229,7 @@ descriptions and examples. The last two are lists.</p>
             
             <div class="method-source-code" id="from_xml-source">
 <pre>
-<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 115</span>
+<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 113</span>
 <span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">from_xml</span>(<span class="ruby-identifier">xml_node</span>)
   <span class="ruby-identifier">name</span> = <span class="ruby-string">''</span>
   <span class="ruby-identifier">descriptions</span> = []
@@ -283,7 +285,7 @@ descriptions and examples. The last two are lists.</p>
             
             <div class="method-source-code" id="new-source">
 <pre>
-<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 109</span>
+<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 107</span>
 <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">attributes</span>)
   <span class="ruby-ivar">@name</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:name</span>]
   <span class="ruby-ivar">@descriptions</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:descriptions</span>]

data/doc/rdoc/MyExperimentREST/MyExperimentUser.html

@@ -116,6 +116,8 @@
         
           <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>

data/doc/rdoc/MyExperimentREST/MyExperimentWorkflow.html

@@ -116,6 +116,8 @@
         
           <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -136,14 +138,10 @@
     <div id="description" class="description">
       
 <p>Contains all available information about a workflow: <em><a
-href="MyExperimentWorkflow.html#attribute-i-xml_uri">xml_uri</a></em>,
+href="MyExperimentWorkflow.html#attribute-i-content_uri">content_uri</a></em>,
 <em>title</em>, <em>description</em>,<em>inputs</em>, <em>outputs</em> and
 <em><a
-href="MyExperimentWorkflow.html#attribute-i-uploader_uri">uploader_uri</a></em>.
-The <em><a
-href="MyExperimentWorkflow.html#attribute-i-xml_uri">xml_uri</a></em>
-specifies the XML description on myExperiment and not the XML of the
-workflow itself.</p>
+href="MyExperimentWorkflow.html#attribute-i-uploader_uri">uploader_uri</a></em>.</p>
 
     </div><!-- description -->
 
@@ -161,6 +159,21 @@ workflow itself.</p>
         <h3 class="section-header">Attributes</h3>
 
         
+        <div id="content_uri-attribute-method" class="method-detail">
+          <a name="content_uri"></a>
+          
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">content_uri</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+
+          <div class="method-description">
+          
+          
+          
+          </div>
+        </div>
+        
         <div id="description-attribute-method" class="method-detail">
           <a name="description"></a>
           
@@ -233,21 +246,6 @@ workflow itself.</p>
           
           
           
-          </div>
-        </div>
-        
-        <div id="xml_uri-attribute-method" class="method-detail">
-          <a name="xml_uri"></a>
-          
-          <div class="method-heading attribute-method-heading">
-            <span class="method-name">xml_uri</span><span
-              class="attribute-access-type">[R]</span>
-          </div>
-
-          <div class="method-description">
-          
-          
-          
           </div>
         </div>
         
@@ -279,9 +277,9 @@ workflow itself.</p>
             
             <div class="method-source-code" id="new-source">
 <pre>
-<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 61</span>
+<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 59</span>
 <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">attributes</span>)
-  <span class="ruby-ivar">@xml_uri</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:xml_uri</span>]
+  <span class="ruby-ivar">@content_uri</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:content_uri</span>]
   <span class="ruby-ivar">@title</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:title</span>]
   <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:description</span>]
   <span class="ruby-ivar">@inputs</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:inputs</span>]
@@ -318,7 +316,7 @@ href="MyExperimentWorkflow.html">MyExperimentWorkflow</a></em> object</p>
             
             <div class="method-source-code" id="parse-source">
 <pre>
-<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 71</span>
+<span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 69</span>
 <span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">parse</span>(<span class="ruby-identifier">xml</span>)
 
   <span class="ruby-identifier">wkf_inputs</span> = []
@@ -335,7 +333,7 @@ href="MyExperimentWorkflow.html">MyExperimentWorkflow</a></em> object</p>
   <span class="ruby-keyword">end</span>
 
 
-  <span class="ruby-identifier">new</span>(<span class="ruby-value">:xml_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/content-uri&quot;</span>).<span class="ruby-identifier">content</span>,
+  <span class="ruby-identifier">new</span>(<span class="ruby-value">:content_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/content-uri&quot;</span>).<span class="ruby-identifier">content</span>,
       <span class="ruby-value">:title</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/title&quot;</span>).<span class="ruby-identifier">content</span>,
       <span class="ruby-value">:description</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/description&quot;</span>).<span class="ruby-identifier">content</span>,
       <span class="ruby-value">:inputs</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">wkf_inputs</span>,

data/doc/rdoc/MyExperimentREST/SessionCookie.html

@@ -0,0 +1,216 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
+
+  <title>Class: MyExperimentREST::SessionCookie</title>
+
+  <link rel="stylesheet" href="../rdoc.css" type="text/css" media="screen" />
+
+  <script src="../js/jquery.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/thickbox-compressed.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/quicksearch.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/darkfish.js" type="text/javascript" charset="utf-8"></script>
+
+</head>
+<body id="top" class="class">
+
+  <div id="metadata">
+    <div id="home-metadata">
+      <div id="home-section" class="section">
+        <h3 class="section-header">
+          <a href="../index.html">Home</a>
+          <a href="../index.html#classes">Classes</a>
+          <a href="../index.html#methods">Methods</a>
+        </h3>
+      </div>
+    </div>
+
+    <div id="file-metadata">
+      <div id="file-list-section" class="section">
+        <h3 class="section-header">In Files</h3>
+        <div class="section-body">
+          <ul>
+          
+            <li><a href="../lib/myexperiment-rest/authentication_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
+              class="thickbox" title="lib/myexperiment-rest/authentication.rb">lib/myexperiment-rest/authentication.rb</a></li>
+          
+          </ul>
+        </div>
+      </div>
+
+      
+    </div>
+
+    <div id="class-metadata">
+      
+      <!-- Parent Class -->
+      <div id="parent-class-section" class="section">
+        <h3 class="section-header">Parent</h3>
+        
+        <p class="link">Object</p>
+        
+      </div>
+      
+
+      
+
+      
+
+      
+      <!-- Method Quickref -->
+      <div id="method-list-section" class="section">
+        <h3 class="section-header">Methods</h3>
+        <ul class="link-list">
+          
+          <li><a href="#method-c-create_session_cookie">::create_session_cookie</a></li>
+          
+        </ul>
+      </div>
+      
+
+      
+    </div>
+
+    <div id="project-metadata">
+      
+      
+      <div id="fileindex-section" class="section project-section">
+        <h3 class="section-header">Files</h3>
+        <ul>
+        
+          <li class="file"><a href="../CHANGES.html">CHANGES</a></li>
+        
+          <li class="file"><a href="../LICENSE.html">LICENSE</a></li>
+        
+          <li class="file"><a href="../README.html">README</a></li>
+        
+        </ul>
+      </div>
+      
+
+      <div id="classindex-section" class="section project-section">
+        <h3 class="section-header">Class/Module Index
+          <span class="search-toggle"><img src="../images/find.png"
+            height="16" width="16" alt="[+]"
+            title="show/hide quicksearch" /></span></h3>
+        <form action="#" method="get" accept-charset="utf-8" class="initially-hidden">
+        <fieldset>
+          <legend>Quicksearch</legend>
+          <input type="text" name="quicksearch" value=""
+            class="quicksearch-field" />
+        </fieldset>
+        </form>
+
+        <ul class="link-list">
+        
+          <li><a href="../MyExperimentREST.html">MyExperimentREST</a></li>
+        
+          <li><a href="../MyExperimentREST/MyExperimentIOData.html">MyExperimentREST::MyExperimentIOData</a></li>
+        
+          <li><a href="../MyExperimentREST/MyExperimentUser.html">MyExperimentREST::MyExperimentUser</a></li>
+        
+          <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
+        
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
+          <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
+        
+          <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
+        
+          <li><a href="../MyExperimentREST/Workflow.html">MyExperimentREST::Workflow</a></li>
+        
+        </ul>
+        <div id="no-class-search-results" style="display: none;">No matching classes.</div>
+      </div>
+
+      
+    </div>
+  </div>
+
+  <div id="documentation">
+    <h1 class="class">MyExperimentREST::SessionCookie</h1>
+
+    <div id="description" class="description">
+      
+<p>Connects to myExperiment REST API and creates a session cookie object that
+can be used for basic authentication.</p>
+
+    </div><!-- description -->
+
+    
+    <div id="5Buntitled-5D" class="documentation-section">
+      
+
+      
+
+      
+
+      
+
+      <!-- Methods -->
+      
+      <div id="public-class-method-details" class="method-section section">
+        <h3 class="section-header">Public Class Methods</h3>
+
+      
+        <div id="create_session_cookie-method" class="method-detail ">
+          <a name="method-c-create_session_cookie"></a>
+
+          
+          <div class="method-heading">
+            <span class="method-name">create_session_cookie</span><span
+              class="method-args">(username, password)</span>
+            <span class="method-click-advice">click to toggle source</span>
+          </div>
+          
+
+          <div class="method-description">
+            
+            <p>Returns a session cookie as a string.</p>
+            
+
+            
+            <div class="method-source-code" id="create_session_cookie-source">
+<pre>
+<span class="ruby-comment"># File lib/myexperiment-rest/authentication.rb, line 12</span>
+<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">create_session_cookie</span>(<span class="ruby-identifier">username</span>, <span class="ruby-identifier">password</span>)
+  <span class="ruby-keyword">begin</span>
+    <span class="ruby-comment"># Create a session cookie</span>
+    <span class="ruby-identifier">response</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">post</span>(<span class="ruby-node">&quot;#{Urls::MYEXPERIMENT_URL}/#{Urls::SESSION_URL}&quot;</span>,
+                                     <span class="ruby-node">&quot;&lt;session&gt;&lt;username&gt;#{username}&lt;/username&gt;&lt;password&gt;#{password}&lt;/password&gt;&lt;/session&gt;&quot;</span>,
+                                     {<span class="ruby-value">:content_type</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-string">'application/xml'</span>} )
+    <span class="ruby-identifier">response</span>.<span class="ruby-identifier">cookies</span> 
+  <span class="ruby-keyword">rescue</span> <span class="ruby-constant">Exception</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">e</span>
+    <span class="ruby-identifier">raise</span> <span class="ruby-string">&quot;REST call to acquire workflow resource failed!\n&quot;</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">e</span>
+  <span class="ruby-keyword">end</span>
+
+<span class="ruby-keyword">end</span></pre>
+            </div><!-- create_session_cookie-source -->
+            
+          </div>
+
+          
+
+          
+        </div><!-- create_session_cookie-method -->
+
+      
+      </div><!-- public-class-method-details -->
+    
+    </div><!-- 5Buntitled-5D -->
+  
+
+  </div><!-- documentation -->
+
+  <div id="validator-badges">
+    <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+    <p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
+      Rdoc Generator</a> 2</small>.</p>
+  </div>
+
+</body>
+</html>
+

data/doc/rdoc/MyExperimentREST/Urls.html

@@ -96,6 +96,8 @@
         
           <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -134,6 +136,11 @@
           <dd class="description"><p>URL constants</p></dd>
           
         
+          <dt><a name="SESSION_URL">SESSION_URL</a></dt>
+          
+          <dd class="description"></dd>
+          
+        
           <dt><a name="USER_URL">USER_URL</a></dt>
           
           <dd class="description"></dd>

data/doc/rdoc/MyExperimentREST/User.html

@@ -116,6 +116,8 @@
         
           <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>

data/doc/rdoc/MyExperimentREST/Workflow.html

@@ -116,6 +116,8 @@
         
           <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="../MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -162,7 +164,7 @@ href="MyExperimentWorkflow.html">MyExperimentWorkflow</a></em> object.</p>
           
           <div class="method-heading">
             <span class="method-name">from_id_and_version</span><span
-              class="method-args">(id, version='')</span>
+              class="method-args">(id, version='', session_cookie={})</span>
             <span class="method-click-advice">click to toggle source</span>
           </div>
           
@@ -178,10 +180,10 @@ a myExperiment id and version for that workflow.</p>
             <div class="method-source-code" id="from_id_and_version-source">
 <pre>
 <span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 38</span>
-<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">from_id_and_version</span>(<span class="ruby-identifier">id</span>, <span class="ruby-identifier">version</span>=<span class="ruby-string">''</span>)
+<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">from_id_and_version</span>(<span class="ruby-identifier">id</span>, <span class="ruby-identifier">version</span>=<span class="ruby-string">''</span>, <span class="ruby-identifier">session_cookie</span>={})
 
   <span class="ruby-comment"># Get workflow resource information</span>
-  <span class="ruby-identifier">xml</span> = <span class="ruby-constant">MyExperimentREST</span>.<span class="ruby-identifier">get_myexperiment_data</span>(<span class="ruby-constant">Urls</span><span class="ruby-operator">::</span><span class="ruby-constant">WORKFLOW_URL</span>, <span class="ruby-value">:id</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">id</span>, <span class="ruby-value">:version</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">version</span>)
+  <span class="ruby-identifier">xml</span> = <span class="ruby-constant">MyExperimentREST</span>.<span class="ruby-identifier">get_myexperiment_data</span>(<span class="ruby-constant">Urls</span><span class="ruby-operator">::</span><span class="ruby-constant">WORKFLOW_URL</span>, <span class="ruby-value">:id</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">id</span>, <span class="ruby-value">:version</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">version</span>, <span class="ruby-value">:session_cookie</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">session_cookie</span>)
 
   <span class="ruby-constant">MyExperimentWorkflow</span>.<span class="ruby-identifier">parse</span>(<span class="ruby-identifier">xml</span>)
 <span class="ruby-keyword">end</span></pre>
@@ -201,7 +203,7 @@ a myExperiment id and version for that workflow.</p>
           
           <div class="method-heading">
             <span class="method-name">from_uri</span><span
-              class="method-args">(uri)</span>
+              class="method-args">(uri, session_cookie={})</span>
             <span class="method-click-advice">click to toggle source</span>
           </div>
           
@@ -217,7 +219,7 @@ a URI of the workflow in the repository as a String.</p>
             <div class="method-source-code" id="from_uri-source">
 <pre>
 <span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 11</span>
-<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">from_uri</span>(<span class="ruby-identifier">uri</span>)
+<span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">from_uri</span>(<span class="ruby-identifier">uri</span>, <span class="ruby-identifier">session_cookie</span>={})
 
   <span class="ruby-identifier">workflow_id</span> = <span class="ruby-string">''</span>
   <span class="ruby-identifier">workflow_version</span> = <span class="ruby-string">''</span>
@@ -237,7 +239,7 @@ a URI of the workflow in the repository as a String.</p>
   <span class="ruby-keyword">end</span>
 
   <span class="ruby-comment"># Get workflow resource information </span>
-  <span class="ruby-identifier">xml</span> = <span class="ruby-constant">MyExperimentREST</span>.<span class="ruby-identifier">get_myexperiment_data</span>(<span class="ruby-constant">Urls</span><span class="ruby-operator">::</span><span class="ruby-constant">WORKFLOW_URL</span>, <span class="ruby-value">:id</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">workflow_id</span>, <span class="ruby-value">:version</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">workflow_version</span>)
+  <span class="ruby-identifier">xml</span> = <span class="ruby-constant">MyExperimentREST</span>.<span class="ruby-identifier">get_myexperiment_data</span>(<span class="ruby-constant">Urls</span><span class="ruby-operator">::</span><span class="ruby-constant">WORKFLOW_URL</span>, <span class="ruby-value">:id</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">workflow_id</span>, <span class="ruby-value">:version</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">workflow_version</span>, <span class="ruby-value">:session_cookie</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">session_cookie</span>)
   
   <span class="ruby-constant">MyExperimentWorkflow</span>.<span class="ruby-identifier">parse</span>(<span class="ruby-identifier">xml</span>)
 <span class="ruby-keyword">end</span></pre>

data/doc/rdoc/README.html

@@ -72,6 +72,8 @@
         
           <li><a href="./MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
         
+          <li><a href="./MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+        
           <li><a href="./MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
         
           <li><a href="./MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -94,7 +96,7 @@
 <p>Konstantinos Karasavvas</p>
 </td></tr><tr><td class="rdoc-term"><p>Gem Version</p></td>
 <td>
-<p>0.3.0</p>
+<p>0.3.2</p>
 </td></tr><tr><td class="rdoc-term"><p>Contact</p></td>
 <td>
 <p><a href="mailto:kostas.karasavvas@nbic.nl">kostas.karasavvas@nbic.nl</a></p>

data/doc/rdoc/created.rid

@@ -1,8 +1,9 @@
-Wed, 28 Sep 2011 12:45:52 +0200
+Mon, 16 Jan 2012 11:48:00 +0100
 LICENSE	Tue, 26 Jul 2011 16:45:34 +0200
-lib/myexperiment-rest/constants.rb	Wed, 28 Sep 2011 10:04:55 +0200
-README	Wed, 28 Sep 2011 12:41:40 +0200
+lib/myexperiment-rest/constants.rb	Thu, 29 Sep 2011 16:33:55 +0200
+README	Mon, 16 Jan 2012 11:47:36 +0100
 lib/myexperiment-rest/user.rb	Wed, 28 Sep 2011 12:11:32 +0200
-lib/myexperiment-rest.rb	Wed, 28 Sep 2011 12:07:50 +0200
-CHANGES	Wed, 28 Sep 2011 12:42:24 +0200
-lib/myexperiment-rest/workflow.rb	Wed, 28 Sep 2011 12:32:43 +0200
+lib/myexperiment-rest.rb	Tue, 04 Oct 2011 15:07:41 +0200
+CHANGES	Mon, 16 Jan 2012 11:47:22 +0100
+lib/myexperiment-rest/authentication.rb	Mon, 03 Oct 2011 12:20:41 +0200
+lib/myexperiment-rest/workflow.rb	Mon, 03 Oct 2011 12:44:03 +0200

data/doc/rdoc/index.html

@@ -29,7 +29,7 @@
 <p>Konstantinos Karasavvas</p>
 </td></tr><tr><td class="rdoc-term"><p>Gem Version</p></td>
 <td>
-<p>0.3.0</p>
+<p>0.3.2</p>
 </td></tr><tr><td class="rdoc-term"><p>Contact</p></td>
 <td>
 <p><a href="mailto:kostas.karasavvas@nbic.nl">kostas.karasavvas@nbic.nl</a></p>
@@ -94,6 +94,8 @@ demonstrates how you can use the library: $ get_workflow_data.rb.</p>
     
     <li class="class"><a href="MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
     
+    <li class="class"><a href="MyExperimentREST/SessionCookie.html">MyExperimentREST::SessionCookie</a></li>
+    
     <li class="module"><a href="MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
     
     <li class="class"><a href="MyExperimentREST/User.html">MyExperimentREST::User</a></li>
@@ -105,22 +107,24 @@ demonstrates how you can use the library: $ get_workflow_data.rb.</p>
   <h2 id="methods">Methods</h2>
   <ul>
     
+      <li><a href="MyExperimentREST/SessionCookie.html#method-c-create_session_cookie">::create_session_cookie &mdash; MyExperimentREST::SessionCookie</a></li>
+    
       <li><a href="MyExperimentREST/User.html#method-c-from_id">::from_id &mdash; MyExperimentREST::User</a></li>
     
       <li><a href="MyExperimentREST/Workflow.html#method-c-from_id_and_version">::from_id_and_version &mdash; MyExperimentREST::Workflow</a></li>
     
-      <li><a href="MyExperimentREST/User.html#method-c-from_uri">::from_uri &mdash; MyExperimentREST::User</a></li>
-    
       <li><a href="MyExperimentREST/Workflow.html#method-c-from_uri">::from_uri &mdash; MyExperimentREST::Workflow</a></li>
     
+      <li><a href="MyExperimentREST/User.html#method-c-from_uri">::from_uri &mdash; MyExperimentREST::User</a></li>
+    
       <li><a href="MyExperimentREST/MyExperimentIOData.html#method-c-from_xml">::from_xml &mdash; MyExperimentREST::MyExperimentIOData</a></li>
     
       <li><a href="MyExperimentREST.html#method-c-get_myexperiment_data">::get_myexperiment_data &mdash; MyExperimentREST</a></li>
     
-      <li><a href="MyExperimentREST/MyExperimentUser.html#method-c-new">::new &mdash; MyExperimentREST::MyExperimentUser</a></li>
-    
       <li><a href="MyExperimentREST/MyExperimentWorkflow.html#method-c-new">::new &mdash; MyExperimentREST::MyExperimentWorkflow</a></li>
     
+      <li><a href="MyExperimentREST/MyExperimentUser.html#method-c-new">::new &mdash; MyExperimentREST::MyExperimentUser</a></li>
+    
       <li><a href="MyExperimentREST/MyExperimentIOData.html#method-c-new">::new &mdash; MyExperimentREST::MyExperimentIOData</a></li>
     
       <li><a href="MyExperimentREST/MyExperimentUser.html#method-c-parse">::parse &mdash; MyExperimentREST::MyExperimentUser</a></li>

data/doc/rdoc/lib/myexperiment-rest/authentication_rb.html

@@ -0,0 +1,54 @@
+<?xml version="1.0" encoding="utf-8"?>
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
+
+  <title>File: authentication.rb [myexperiment-rest Docs]</title>
+
+  <link type="text/css" media="screen" href="../../rdoc.css" rel="stylesheet" />
+
+  <script src="../../js/jquery.js" type="text/javascript"
+    charset="utf-8"></script>
+  <script src="../../js/thickbox-compressed.js" type="text/javascript"
+    charset="utf-8"></script>
+  <script src="../../js/quicksearch.js" type="text/javascript"
+    charset="utf-8"></script>
+  <script src="../../js/darkfish.js" type="text/javascript"
+    charset="utf-8"></script>
+</head>
+
+<body class="file file-popup">
+  <div id="metadata">
+    <dl>
+      <dt class="modified-date">Last Modified</dt>
+      <dd class="modified-date">Mon Oct 03 12:20:41 +0200 2011</dd>
+
+      
+      <dt class="requires">Requires</dt>
+      <dd class="requires">
+        <ul>
+        
+        </ul>
+      </dd>
+      
+
+      
+    </dl>
+  </div>
+
+  <div id="documentation">
+    
+    <div class="description">
+      <h2>Description</h2>
+      
+<p>require ‘rest_client’</p>
+
+    </div>
+    
+  </div>
+</body>
+</html>
+

data/doc/rdoc/lib/myexperiment-rest/constants_rb.html

@@ -24,7 +24,7 @@
   <div id="metadata">
     <dl>
       <dt class="modified-date">Last Modified</dt>
-      <dd class="modified-date">Wed Sep 28 10:04:55 +0200 2011</dd>
+      <dd class="modified-date">Thu Sep 29 16:33:55 +0200 2011</dd>
 
       
       <dt class="requires">Requires</dt>

data/doc/rdoc/lib/myexperiment-rest/workflow_rb.html

@@ -24,7 +24,7 @@
   <div id="metadata">
     <dl>
       <dt class="modified-date">Last Modified</dt>
-      <dd class="modified-date">Wed Sep 28 12:32:43 +0200 2011</dd>
+      <dd class="modified-date">Mon Oct 03 12:44:03 +0200 2011</dd>
 
       
       <dt class="requires">Requires</dt>

data/doc/rdoc/lib/myexperiment-rest_rb.html

@@ -24,7 +24,7 @@
   <div id="metadata">
     <dl>
       <dt class="modified-date">Last Modified</dt>
-      <dd class="modified-date">Wed Sep 28 12:07:50 +0200 2011</dd>
+      <dd class="modified-date">Tue Oct 04 15:07:41 +0200 2011</dd>
 
       
       <dt class="requires">Requires</dt>
@@ -41,6 +41,8 @@
         
           <li>myexperiment-rest/user</li>
         
+          <li>myexperiment-rest/authentication</li>
+        
         </ul>
       </dd>
       

data/lib/myexperiment-rest.rb

@@ -4,6 +4,7 @@ require 'rest_client'
 require 'myexperiment-rest/constants'
 require 'myexperiment-rest/workflow'
 require 'myexperiment-rest/user'
+require 'myexperiment-rest/authentication'
 
 
 module MyExperimentREST
@@ -17,11 +18,20 @@ module MyExperimentREST
     when Urls::WORKFLOW_URL
       begin
         # Get workflow resource information -- if version is empty it returns the current version
-        response = RestClient.get("#{Urls::MYEXPERIMENT_URL}/#{Urls::WORKFLOW_URL}",
-                                         {:params => {'id' => "#{params[:id]}",
-                                                      'version' => "#{params[:version]}",
-                                                      'elements' => 'title,description,content-uri,components,uploader'} } )
-        response
+        if params[:session_cookie].empty?
+          response = RestClient.get("#{Urls::MYEXPERIMENT_URL}/#{Urls::WORKFLOW_URL}",
+                                           {:params => {'id' => "#{params[:id]}",
+                                                        'version' => "#{params[:version]}",
+                                                        'elements' => 'title,description,content-uri,components,uploader'} } )
+          response      
+        else    # TODO: reduce repetition.. if else only for the cookie key-value pair!!
+          response = RestClient.get("#{Urls::MYEXPERIMENT_URL}/#{Urls::WORKFLOW_URL}", 
+                                           {:params => {'id' => "#{params[:id]}",
+                                                        'version' => "#{params[:version]}",
+                                                        'elements' => 'title,description,content-uri,components,uploader'},
+                                            :cookies => params[:session_cookie] } )
+          response
+        end
       rescue Exception => e
         raise "REST call to acquire workflow resource failed!\n" + e
       end

data/lib/myexperiment-rest/authentication.rb

@@ -0,0 +1,28 @@
+#require 'rest_client'
+
+module MyExperimentREST
+
+  #
+  # Connects to myExperiment REST API and creates a session cookie object that
+  # can be used for basic authentication.
+  #
+  class SessionCookie
+
+    # Returns a session cookie as a string.
+    def self.create_session_cookie(username, password)
+      begin
+        # Create a session cookie
+        response = RestClient.post("#{Urls::MYEXPERIMENT_URL}/#{Urls::SESSION_URL}",
+                                         "<session><username>#{username}</username><password>#{password}</password></session>",
+                                         {:content_type => 'application/xml'} )
+        response.cookies 
+      rescue Exception => e
+        raise "REST call to acquire workflow resource failed!\n" + e
+      end
+
+    end
+
+  end  # class SessionCookie
+
+
+end  # module MyExperimentREST

data/lib/myexperiment-rest/constants.rb

@@ -6,6 +6,7 @@ module MyExperimentREST
     MYEXPERIMENT_URL = "http://www.myexperiment.org"
     WORKFLOW_URL = "workflow.xml"
     USER_URL = "user.xml"
+    SESSION_URL = "session/create"
   end
 
 end

data/lib/myexperiment-rest/workflow.rb

@@ -8,7 +8,7 @@ module MyExperimentREST
   class Workflow
 
     # Returns a _MyExperimentWorkflow_ object given a URI of the workflow in the repository as a String.
-    def self.from_uri(uri)
+    def self.from_uri(uri, session_cookie={})
 
       workflow_id = ''
       workflow_version = ''
@@ -28,17 +28,17 @@ module MyExperimentREST
       end
 
       # Get workflow resource information 
-      xml = MyExperimentREST.get_myexperiment_data(Urls::WORKFLOW_URL, :id => workflow_id, :version => workflow_version)
+      xml = MyExperimentREST.get_myexperiment_data(Urls::WORKFLOW_URL, :id => workflow_id, :version => workflow_version, :session_cookie => session_cookie)
       
       MyExperimentWorkflow.parse(xml)
     end
 
 
     # Returns a _MyExperimentWorkflow_ object given a myExperiment id and version for that workflow.
-    def self.from_id_and_version(id, version='')
+    def self.from_id_and_version(id, version='', session_cookie={})
 
       # Get workflow resource information
-      xml = MyExperimentREST.get_myexperiment_data(Urls::WORKFLOW_URL, :id => id, :version => version)
+      xml = MyExperimentREST.get_myexperiment_data(Urls::WORKFLOW_URL, :id => id, :version => version, :session_cookie => session_cookie)
 
       MyExperimentWorkflow.parse(xml)
     end
@@ -49,17 +49,15 @@ module MyExperimentREST
 
 
   #
-  # Contains all available information about a workflow: _xml_uri_,
-  # _title_, _description_,_inputs_, _outputs_ and _uploader_uri_. The _xml_uri_
-  # specifies the XML description on myExperiment and not the XML of the workflow
-  # itself.
+  # Contains all available information about a workflow: _content_uri_,
+  # _title_, _description_,_inputs_, _outputs_ and _uploader_uri_. 
   #
   class MyExperimentWorkflow
     
-    attr_reader(:xml_uri, :title, :description, :inputs, :outputs, :uploader_uri)
+    attr_reader(:content_uri, :title, :description, :inputs, :outputs, :uploader_uri)
 
     def initialize(attributes)
-      @xml_uri = attributes[:xml_uri]
+      @content_uri = attributes[:content_uri]
       @title = attributes[:title]
       @description = attributes[:description]
       @inputs = attributes[:inputs]
@@ -84,7 +82,7 @@ module MyExperimentREST
       end
 
 
-      new(:xml_uri => doc.find_first("/workflow/content-uri").content,
+      new(:content_uri => doc.find_first("/workflow/content-uri").content,
           :title => doc.find_first("/workflow/title").content,
           :description => doc.find_first("/workflow/description").content,
           :inputs => wkf_inputs,

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: myexperiment-rest
 version: !ruby/object:Gem::Version 
-  hash: 19
+  hash: 23
   prerelease: 
   segments: 
   - 0
   - 3
-  - 0
-  version: 0.3.0
+  - 2
+  version: 0.3.2
 platform: ruby
 authors: 
 - Konstantinos Karasavvas
@@ -15,7 +15,7 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2011-09-28 00:00:00 Z
+date: 2012-01-16 00:00:00 Z
 dependencies: 
 - !ruby/object:Gem::Dependency 
   name: rest-client
@@ -41,12 +41,12 @@ dependencies:
     requirements: 
     - - ~>
       - !ruby/object:Gem::Version 
-        hash: 29
+        hash: 3
         segments: 
         - 2
-        - 0
-        - 9
-        version: 2.0.9
+        - 2
+        - 2
+        version: 2.2.2
   type: :runtime
   version_requirements: *id002
 description: This is a simple library to access data on myExperiment via its REST API. Currently supports a subset of the workflow information available.
@@ -68,6 +68,7 @@ files:
 - lib/myexperiment-rest.rb
 - lib/myexperiment-rest/workflow.rb
 - lib/myexperiment-rest/user.rb
+- lib/myexperiment-rest/authentication.rb
 - lib/myexperiment-rest/constants.rb
 - doc/rdoc/rdoc.css
 - doc/rdoc/LICENSE.html
@@ -79,6 +80,7 @@ files:
 - doc/rdoc/MyExperimentREST.html
 - doc/rdoc/README.html
 - doc/rdoc/lib/myexperiment-rest/constants_rb.html
+- doc/rdoc/lib/myexperiment-rest/authentication_rb.html
 - doc/rdoc/lib/myexperiment-rest/user_rb.html
 - doc/rdoc/lib/myexperiment-rest/workflow_rb.html
 - doc/rdoc/lib/myexperiment-rest_rb.html
@@ -110,6 +112,7 @@ files:
 - doc/rdoc/MyExperimentREST/MyExperimentUser.html
 - doc/rdoc/MyExperimentREST/MyExperimentIOData.html
 - doc/rdoc/MyExperimentREST/Workflow.html
+- doc/rdoc/MyExperimentREST/SessionCookie.html
 homepage: 
 licenses: []