ms-quant 0.1.0 → 0.1.1

data/VERSION

@@ -1 +1 @@
-0.1.0
+0.1.1

data/lib/ms/quant/qspec.rb

@@ -3,8 +3,11 @@ module Ms::Quant ; end
 
 class Ms::Quant::Qspec
 
-  NBURNIN = 50  # need to check
-  NITER = 2000 # check
+  # personal communication with Hyungwon Choi: "We typically use nburn=2000,
+  # niter=10000, which is quite sufficient to guarantee the reproducibility of
+  # results using the same data."
+  NBURNIN = 2000
+  NITER = 10000
   INIT_HEADER = %w(protid protLen)
   DELIMITER = "\t"
 

metadata

@@ -2,7 +2,7 @@
 name: ms-quant
 version: !ruby/object:Gem::Version 
   prerelease: 
-  version: 0.1.0
+  version: 0.1.1
 platform: ruby
 authors: 
 - John T. Prince