ms-quant 0.1.0 → 0.1.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (3) hide show
  1. data/VERSION +1 -1
  2. data/lib/ms/quant/qspec.rb +5 -2
  3. metadata +1 -1
data/VERSION CHANGED
@@ -1 +1 @@
1
- 0.1.0
1
+ 0.1.1
@@ -3,8 +3,11 @@ module Ms::Quant ; end
3
3
 
4
4
  class Ms::Quant::Qspec
5
5
 
6
- NBURNIN = 50 # need to check
7
- NITER = 2000 # check
6
+ # personal communication with Hyungwon Choi: "We typically use nburn=2000,
7
+ # niter=10000, which is quite sufficient to guarantee the reproducibility of
8
+ # results using the same data."
9
+ NBURNIN = 2000
10
+ NITER = 10000
8
11
  INIT_HEADER = %w(protid protLen)
9
12
  DELIMITER = "\t"
10
13
 
metadata CHANGED
@@ -2,7 +2,7 @@
2
2
  name: ms-quant
3
3
  version: !ruby/object:Gem::Version
4
4
  prerelease:
5
- version: 0.1.0
5
+ version: 0.1.1
6
6
  platform: ruby
7
7
  authors:
8
8
  - John T. Prince