ms-in_silico 0.1.0 → 0.2.0
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- data/lib/ms/in_silico/spectrum.rb +11 -4
- metadata +3 -3
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@@ -112,6 +112,9 @@ module Ms
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# hash of (residue, locations) pairs which indicate the
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# indicies at which the residue occurs in sequence. The
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# ladder corresponds to the M values described above.
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115
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# Characters in the sequence that do not add mass, such
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# as whitespace, are skipped and do not add an entry to
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# the ladder.
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#
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# Returns [ladder, {residue => locations}].
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#
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@@ -132,10 +135,14 @@ module Ms
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mass = 0
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ladder = []
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sequence.each_byte do |byte|
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mass
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-
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-
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-
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# check a mass is added... if not (as for whitespace)
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# then skip to the next byte
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next if (mass == (mass += masses_by_byte[byte]))
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if location = locations[byte]
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location << ladder.length
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end
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+
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ladder << mass
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end
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metadata
CHANGED
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@@ -1,7 +1,7 @@
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1
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--- !ruby/object:Gem::Specification
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name: ms-in_silico
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version: !ruby/object:Gem::Version
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version: 0.
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4
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version: 0.2.0
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platform: ruby
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authors:
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- Simon Chiang
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@@ -9,7 +9,7 @@ autorequire:
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bindir: bin
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cert_chain: []
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date: 2008-
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date: 2008-12-03 00:00:00 -07:00
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default_executable:
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dependencies:
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- !ruby/object:Gem::Dependency
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@@ -72,7 +72,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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requirements: []
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rubyforge_project: mspire
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-
rubygems_version: 1.3.
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rubygems_version: 1.3.1
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signing_key:
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specification_version: 2
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summary: ms-in_silico task library
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